BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144766.5 + phase: 0
(393 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC28384.1| mariner transposase [Glycine max] gi|7488706|pir|... 430 e-119
ref|NP_912355.1| unknown protein [Oryza sativa (japonica cultiva... 371 e-101
gb|AAX95638.1| hypothetical protein [Oryza sativa (japonica cult... 368 e-100
ref|XP_470629.1| Putative transposase [Oryza sativa (japonica cu... 368 e-100
ref|XP_476063.1| hypothetical protein [Oryza sativa (japonica cu... 359 7e-98
emb|CAD41469.2| OSJNBa0079A21.13 [Oryza sativa (japonica cultiva... 358 2e-97
ref|XP_470325.1| putative transposase [Oryza sativa (japonica cu... 348 1e-94
emb|CAE04907.2| OSJNBa0082E08.4 [Oryza sativa (japonica cultivar... 325 2e-87
emb|CAD40538.2| OSJNBa0055C08.7 [Oryza sativa (japonica cultivar... 310 6e-83
ref|XP_493795.1| unnamed protein product [Oryza sativa (japonica... 280 4e-74
emb|CAE01628.2| OSJNBa0029H02.9 [Oryza sativa (japonica cultivar... 268 3e-70
gb|AAM97157.1| transposon protein, putative, mariner sub-class [... 253 9e-66
gb|AAP53116.1| putative transposable element [Oryza sativa (japo... 250 6e-65
gb|AAL69350.1| transposase [Tripsacum pilosum] 167 4e-40
gb|AAL69349.1| transposase [Glycine max] 165 3e-39
gb|AAL69340.1| transposase [Pariana radiciflora] 155 2e-36
gb|AAL69354.1| transposase [Zea diploperennis] 154 3e-36
gb|AAL69339.1| transposase [Cynodon dactylon] 151 3e-35
gb|AAL69348.1| transposase [Iris x nelsonii] gi|18419515|gb|AAL6... 150 8e-35
gb|AAL69335.1| transposase [Arundinaria simonii] 149 1e-34
>gb|AAC28384.1| mariner transposase [Glycine max] gi|7488706|pir||T06335 probable
transposase - soybean transposon mariner element Soymar1
Length = 425
Score = 430 bits (1106), Expect = e-119
Identities = 214/390 (54%), Positives = 293/390 (74%), Gaps = 5/390 (1%)
Query: 5 VASQFSLHIRYVQRIWKLAENKGVHADVSSKRAGNCGRKRV-VDLDRVRDIPLKKRTTIR 63
VAS FS+ + + RIWK A+ H DVS K+ N GRKRV +DL ++R+IPL +RTT+R
Sbjct: 37 VASSFSVCRKTIDRIWKRAKESETH-DVSHKKTKNSGRKRVEIDLSQLREIPLSQRTTVR 95
Query: 64 DLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTE-GNKARLQFCISMLDSASIDHDPIF 122
L+ A+ + + R I+S I+++S+AIKP LTE G + RL+FC+SML+ I HDP+F
Sbjct: 96 TLAVAMKTNTSAMYRLIQSGAIKRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDPMF 153
Query: 123 KGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQG 182
+ MYN +HIDEKWFY+ +KS+++YL+ DE+ P SC+SKN++PK+MFL A+ARPRFD++
Sbjct: 154 QSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTAVARPRFDSEK 213
Query: 183 KEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELW 242
FSGKIG F +T+EPA+R+SVNR AGT+ETK I I R++I+ +E+V+P+ E+W
Sbjct: 214 NVTFSGKIGIFLFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSVFIEKVLPATKEVW 273
Query: 243 PIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLDLGFFRS 302
P +E G IFIQQDNA+THI+ +D +F A+Q+GFDIRL+ QPPNSPD NVLDLGFF +
Sbjct: 274 PRDELGSTIFIQQDNARTHINPDDPEFVQAATQDGFDIRLMCQPPNSPDFNVLDLGFFSA 333
Query: 303 IQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVKGTHNYKIPHM 362
IQ+L +K++P ++D+LV+AV KSFE Y + SN IFLSLQ CMIE MK KG++ Y HM
Sbjct: 334 IQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMIETMKAKGSNRYTSQHM 393
Query: 363 KKEQLERRKELPTQRKCDIQLVQEVLSYLD 392
+KE+LE ++LP Q KCD LVQE L YL+
Sbjct: 394 QKEKLETEEQLPIQLKCDPILVQETLDYLN 423
>ref|NP_912355.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|29893625|gb|AAP06879.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 519
Score = 371 bits (952), Expect = e-101
Identities = 189/394 (47%), Positives = 267/394 (66%), Gaps = 2/394 (0%)
Query: 1 MTSLVASQFSLHIRYVQRIWKLAENKGVHADVSSKRAGNCGRKRV-VDLDRVRDIPLKKR 59
+T VA+ + R VQ +W+ + G SK+ NCGRK++ + D ++D+PL++R
Sbjct: 125 VTKSVATDMGVPWRVVQHVWRHGQIGGGIEAFESKKKNNCGRKKLSFNPDAIKDVPLRQR 184
Query: 60 TTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGN-KARLQFCISMLDSASIDH 118
T+RDL+ AL +S+ TL R ++ R+++NAIK LTE N KA +QFCI MLDS SI
Sbjct: 185 RTLRDLANALHMSKTTLFRRLKEGRFRRHTNAIKFTLTEDNMKACVQFCIQMLDSQSIPD 244
Query: 119 DPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRF 178
+P FK +YN V+IDEKWFY + + +YL DE +P + +SKN+I K+MFL A ARPRF
Sbjct: 245 EPTFKSLYNIVYIDEKWFYRTKPDENYYLSLDEPNPRRNVKSKNFIDKVMFLAAKARPRF 304
Query: 179 DAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSM 238
D G+ F GKIG FP E A+RSS +R GT+E K + +TR++I+ ++E+V+P++
Sbjct: 305 DEYGECTFDGKIGIFPFTYWEAAKRSSRSRERGTMELKAMTSVTRDIIRNYLIEKVLPAI 364
Query: 239 MELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLDLG 298
WP EERG PIFIQQDNAKTHI +D F VA ++G+DIRL QPPNSPDLNVLDLG
Sbjct: 365 KHKWPNEERGLPIFIQQDNAKTHIAVDDPAFLSVAQEDGWDIRLTCQPPNSPDLNVLDLG 424
Query: 299 FFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVKGTHNYK 358
FF ++Q+L K SP++++++ V K++EEY SN +FL+LQ CM EIM K +Y
Sbjct: 425 FFAALQSLFQKSSPSNIEEIETNVIKAYEEYPANRSNHVFLTLQGCMREIMLAKEGQHYA 484
Query: 359 IPHMKKEQLERRKELPTQRKCDIQLVQEVLSYLD 392
IPHMKK LER +LP + +CD Q+ + + +++
Sbjct: 485 IPHMKKRSLERNGQLPIRLQCDKQIYLDAVDFIN 518
>gb|AAX95638.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50918023|ref|XP_469408.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
gi|28273357|gb|AAO38443.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 565
Score = 368 bits (945), Expect = e-100
Identities = 189/395 (47%), Positives = 266/395 (66%), Gaps = 6/395 (1%)
Query: 2 TSLVASQFSLHIRYVQRIWKLAE---NKGVHADVSSKRAGNCGRKRVV-DLDRVRDIPLK 57
T VA F++ IR VQRIWK A+ GV +V S++ NCGRK+VV DL V IPL+
Sbjct: 170 TRAVAQVFNVSIRTVQRIWKRAKLCIAHGVQVNVDSRKCYNCGRKKVVIDLSVVSAIPLR 229
Query: 58 KRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGNKA-RLQFCISMLDSASI 116
+R+TIR L+EAL VS+ TL R + +R++SN++KP L E NK RLQ+C+ MLD ++
Sbjct: 230 QRSTIRSLAEALGVSKSTLHRLFKEGHLRRHSNSLKPYLKEANKKERLQWCVGMLDHRTL 289
Query: 117 DHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARP 176
+DP F M N VHIDEKWF +K + FYL EE+P Q+KN I K+MFL +ARP
Sbjct: 290 PNDPKFIEMENIVHIDEKWFNATKKDRTFYLHPLEEEPYRPVQNKNAIEKVMFLSTVARP 349
Query: 177 RFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVP 236
R+DA+G F GKIG +P + +EPA+R S NR GTL TK I+ + R+ ++ ++ +V+P
Sbjct: 350 RYDAEGNCTFDGKIGIWPFVRKEPAQRRSRNRERGTLVTKTIK-VDRDTMRSFIISKVLP 408
Query: 237 SMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLD 296
++ WP+E+ + IFIQQDNA+TH+ +D+ F +Q G DIRLV QPPNSPD+N LD
Sbjct: 409 AIRACWPLEDARRTIFIQQDNARTHVPIDDEQFSVAVAQMGLDIRLVNQPPNSPDMNCLD 468
Query: 297 LGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVKGTHN 356
LGFF S+Q+L + ++++L++ VQK + +YD NR+F++LQSC IE+M+ G +
Sbjct: 469 LGFFASLQSLTANRVSKNMEELIENVQKEYNDYDPKTLNRVFVTLQSCCIEVMEANGGNK 528
Query: 357 YKIPHMKKEQLERRKELPTQRKCDIQLVQEVLSYL 391
YKIPHM K +LE LP +CD QL ++V+ L
Sbjct: 529 YKIPHMNKARLEALGILPKALRCDRQLYEKVIQLL 563
>ref|XP_470629.1| Putative transposase [Oryza sativa (japonica cultivar-group)]
gi|20330765|gb|AAM19128.1| Putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 576
Score = 368 bits (945), Expect = e-100
Identities = 185/395 (46%), Positives = 269/395 (67%), Gaps = 6/395 (1%)
Query: 2 TSLVASQFSLHIRYVQRIWKLAEN---KGVHADVSSKRAGNCGRKRV-VDLDRVRDIPLK 57
T ++A+ F + R VQ IW A+ GV D SK+ GNCG+KR +DLD+V +PL
Sbjct: 181 TEIIAAMFDVTRRVVQDIWTKAKKCLAAGVEVDFKSKKPGNCGQKRSDIDLDQVLALPLN 240
Query: 58 KRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGNKA-RLQFCISMLDSASI 116
R +IR L+ AL+ S+ + R ++ +R++SN+IKP L E NK RL+FC+SMLD+A++
Sbjct: 241 SRCSIRSLASALNASKSQVHRLVKEGALRRHSNSIKPYLKEANKKQRLEFCVSMLDAATL 300
Query: 117 DHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARP 176
+ +P F M N VHIDEKWF K+K FYLV +E++P+ Q+KN I K+MFL +A+P
Sbjct: 301 NAEPRFIDMQNIVHIDEKWFNATMKNKTFYLVFNEDEPVRCVQNKNAIDKVMFLSTLAKP 360
Query: 177 RFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVP 236
R+D +G F GKIG +P + +EPA+RSS NRP GTL TK I +++R + ++ +V+P
Sbjct: 361 RYDEEGNCYFDGKIGIWPFVRKEPAQRSSRNRPKGTLVTKSI-MVSRETSRAFLITKVIP 419
Query: 237 SMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLD 296
++ WP E+ G+ I+IQQDNA THI D+ F +Q G DIR++ QPPNSPD+NVLD
Sbjct: 420 AIASCWPREDVGKTIWIQQDNALTHILPNDEAFALAVAQVGLDIRIMNQPPNSPDMNVLD 479
Query: 297 LGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVKGTHN 356
LGFF S+Q+ + K+ +++D+L+ V + + EY++ L +R+FL+LQ+C IE+MK G +
Sbjct: 480 LGFFASLQSKTYLKNCSNMDELISNVDEEYNEYNSNLVSRVFLNLQACFIEVMKADGGNG 539
Query: 357 YKIPHMKKEQLERRKELPTQRKCDIQLVQEVLSYL 391
YKIPHM K++LER LPT CDI L +V+ L
Sbjct: 540 YKIPHMNKDRLERLDMLPTSLTCDIALYNKVMQTL 574
>ref|XP_476063.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|47777448|gb|AAT38081.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 572
Score = 359 bits (922), Expect = 7e-98
Identities = 183/395 (46%), Positives = 264/395 (66%), Gaps = 6/395 (1%)
Query: 2 TSLVASQFSLHIRYVQRIWKLAE---NKGVHADVSSKRAGNCGRKRV-VDLDRVRDIPLK 57
T LVA +F + IR VQRIWK A+ +G+ +V S++ GN GRK+V +DL + IP+
Sbjct: 177 TRLVAQEFHVSIRTVQRIWKRAKICHEQGITVNVDSRKHGNSGRKKVEIDLSVIAAIPVH 236
Query: 58 KRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGNKA-RLQFCISMLDSASI 116
+R+TIR L++AL VS+ TL R + IR++SN++KP L E NK RL++C+SMLD ++
Sbjct: 237 QRSTIRSLAQALGVSKSTLHRWFKEGLIRRHSNSLKPYLKEANKKERLRWCVSMLDPHTL 296
Query: 117 DHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARP 176
++P F M N +HIDEKWF +K K FYL EE+P F+ +KN I K+MFL A+A+P
Sbjct: 297 PNNPKFIEMENIIHIDEKWFNASKKEKTFYLYPGEEEPYFTVHNKNAIDKVMFLSAVAKP 356
Query: 177 RFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVP 236
R+D +G F+GKIG +P +EPA+R S NR GTL TKPI+ + R+ I+ ++ +V+P
Sbjct: 357 RYDDEGNCTFNGKIGIWPFTRKEPAQRRSRNRERGTLVTKPIK-VDRDTIRSFMISKVLP 415
Query: 237 SMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLD 296
++ WP E+ + I+IQQDNA+TH+ +D F +Q G DIRLV QPPNSPD+N LD
Sbjct: 416 AIRACWPREDARKTIWIQQDNARTHLPIDDAQFGVAVAQTGLDIRLVNQPPNSPDMNCLD 475
Query: 297 LGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVKGTHN 356
LGFF S+Q+L H + ++D++++ V K + +Y+ NR+FL+LQ C IE+M+ +
Sbjct: 476 LGFFASLQSLTHNRISRNMDEIIENVHKEYHDYNPNTLNRVFLTLQGCYIEVMRANEGNK 535
Query: 357 YKIPHMKKEQLERRKELPTQRKCDIQLVQEVLSYL 391
YKIPHM KE+LE LP CD L + V+ L
Sbjct: 536 YKIPHMNKERLEALGVLPKALSCDRGLYERVVESL 570
>emb|CAD41469.2| OSJNBa0079A21.13 [Oryza sativa (japonica cultivar-group)]
gi|50927512|ref|XP_473402.1| OSJNBa0079A21.13 [Oryza
sativa (japonica cultivar-group)]
Length = 453
Score = 358 bits (919), Expect = 2e-97
Identities = 181/361 (50%), Positives = 252/361 (69%), Gaps = 2/361 (0%)
Query: 34 SKRAGNCGRKRV-VDLDRVRDIPLKKRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAI 92
SK+ NCGRK++ + D ++D+PL++R T+RDL+ AL + + TL R ++ R+++NAI
Sbjct: 92 SKKKKNCGRKKLSFNPDAIKDVPLRQRRTLRDLANALHMLKTTLFRRLKEGRFRRHTNAI 151
Query: 93 KPALTEGN-KARLQFCISMLDSASIDHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDE 151
K LTE N KAR+QFCI MLDS SI P FK +YN V+IDEKWFY + + +YL DE
Sbjct: 152 KFTLTEDNMKARVQFCIQMLDSQSIPDKPTFKSLYNIVYIDEKWFYRTKPDENYYLSLDE 211
Query: 152 EDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAG 211
+P + +SKN+I K+MFL A ARPRFD G+ F GKIG FP E A+RSS +R G
Sbjct: 212 PNPRRNVKSKNFIDKVMFLAAKARPRFDEYGECTFDGKIGIFPFTYWEAAKRSSRSRERG 271
Query: 212 TLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRC 271
T+E K + + R++I+ ++E+V+P++ WP EERG PIFIQQDNAKTHI +D F
Sbjct: 272 TMELKAMTTVMRDIIRNYLIEKVLPAIKHKWPNEERGLPIFIQQDNAKTHITVDDPAFLS 331
Query: 272 VASQNGFDIRLVRQPPNSPDLNVLDLGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDT 331
VA ++G+DIRL QPPNSPDLNVLDLGFF ++Q+L K SP++++++ V K++EEY
Sbjct: 332 VAQEDGWDIRLTCQPPNSPDLNVLDLGFFAALQSLFQKSSPSNIEEIETNVIKAYEEYPA 391
Query: 332 ILSNRIFLSLQSCMIEIMKVKGTHNYKIPHMKKEQLERRKELPTQRKCDIQLVQEVLSYL 391
SN +FL+LQ CM EIM VKG +Y IPHMKK LER +L + +CD Q+ + + ++
Sbjct: 392 DRSNHVFLTLQGCMREIMLVKGGQHYAIPHMKKRSLERNGQLLIRLQCDKQIYLDAVDFI 451
Query: 392 D 392
+
Sbjct: 452 N 452
>ref|XP_470325.1| putative transposase [Oryza sativa (japonica cultivar-group)]
gi|40714692|gb|AAR88598.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 565
Score = 348 bits (894), Expect = 1e-94
Identities = 177/395 (44%), Positives = 265/395 (66%), Gaps = 6/395 (1%)
Query: 2 TSLVASQFSLHIRYVQRIWKLAEN---KGVHADVSSKRAGNCGRKR-VVDLDRVRDIPLK 57
T+ VA F++ VQ IW+ A+ +G+ +VSS++ N GRK+ +DL V ++PL+
Sbjct: 167 TTEVAEMFNIKRGRVQDIWRRAKQCRAQGIPVNVSSRKKTNSGRKKNEIDLSDVANVPLQ 226
Query: 58 KRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGNK-ARLQFCISMLDSASI 116
R T+R + A + + TL R ++ IR++SN +KP L E NK +RLQ+CISMLD ++
Sbjct: 227 LRGTLRSFASAAGIPKSTLHRMLKEGLIRRHSNTLKPLLKEENKRSRLQWCISMLDWHTL 286
Query: 117 DHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARP 176
++P F M N VHIDEKWF +K++ FYLVH E+DP Q+KN I K+MFL A+ARP
Sbjct: 287 PNEPKFVDMRNIVHIDEKWFNTTKKTRTFYLVHWEDDPYRPVQNKNSIDKVMFLAAVARP 346
Query: 177 RFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVP 236
R++ +G F GKIG +P +EPA+R+S NRP GTL TK I+ + R+ ++ ++ +V+P
Sbjct: 347 RYNEEGICTFDGKIGLWPFTKKEPAQRTSQNRPRGTLVTKTIK-VDRDTVRSFLIAKVLP 405
Query: 237 SMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLD 296
+++ WP ++ I+IQQDNA H+ +D F SQ GFDIRL+ QPPNSPD+N LD
Sbjct: 406 AIISSWPRDDAHSTIWIQQDNAPAHVPVDDYQFAYAVSQTGFDIRLMHQPPNSPDMNALD 465
Query: 297 LGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVKGTHN 356
LGFF S+Q+L +++ ++D+L+ V++ F+ YD NR+FL+LQSC++E+M+ G +
Sbjct: 466 LGFFASLQSLTYRRISRNMDELIHNVEQEFQAYDDNKLNRVFLTLQSCLLEVMEADGGNG 525
Query: 357 YKIPHMKKEQLERRKELPTQRKCDIQLVQEVLSYL 391
Y+IPHM KE+LER LP C +L ++V+S L
Sbjct: 526 YRIPHMGKERLERLDILPNTLSCGRELYEKVISAL 560
>emb|CAE04907.2| OSJNBa0082E08.4 [Oryza sativa (japonica cultivar-group)]
Length = 502
Score = 325 bits (832), Expect = 2e-87
Identities = 170/358 (47%), Positives = 250/358 (69%), Gaps = 9/358 (2%)
Query: 2 TSLVASQFSLHIRYVQRIWKLAENK---GVHADVSSKRAGNCGRKRV-VDLDRVRDIPLK 57
TS+VA+QF L I+ VQR+WK + + + VSS + G GRK++ VDL+ +R IPLK
Sbjct: 27 TSIVAAQFGLGIQSVQRLWKRGKIQLANSIPVVVSSLKKGRVGRKKIPVDLEALRSIPLK 86
Query: 58 KRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGNK-ARLQFCISMLDSASI 116
+RTTI D+S L++S+ + R +R +R++S++IKP LTE NK +RL++C+ M+ +
Sbjct: 87 ERTTIEDVSAKLNMSKSKIQRYLRKGFLRRHSSSIKPYLTEANKKSRLKWCVDMI-KRDL 145
Query: 117 DHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARP 176
P FK ++ V IDEKWFYL +KS+K+YL+ +++DP +C++KNYIP++MFL ARP
Sbjct: 146 HGGPRFKDFFDFVLIDEKWFYLSQKSEKYYLLPEQDDPHRTCKNKNYIPRLMFLCVCARP 205
Query: 177 RFDAQGKEIFSGKIGAFPLITREPARRSSVN--RPAGTLETKPIQLITRNVIKKCVLEQV 234
RF G IF G+I FPL+T +PA R +V R G L KPI ITR VI+ ++ +V
Sbjct: 206 RF-RDGNCIFDGRISCFPLVTYQPAMRGNVRTGRVRGDLVLKPITSITREVIRDFMINKV 264
Query: 235 VPSMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNV 294
+P++ WP E+ G+PIFIQQDNA +H++ +D DF A Q GFDIRL+ Q PNSPD N+
Sbjct: 265 LPAIRAKWPKEDVGKPIFIQQDNAPSHLNLDDSDFCEHAKQEGFDIRLICQTPNSPDFNI 324
Query: 295 LDLGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVK 352
LDL FFR+IQA+Q+ K+ +++ LV V+++F EY +NR+F++LQS ++E MK+K
Sbjct: 325 LDLDFFRAIQAIQYNKNAKTIEALVPTVEEAFMEYSAHKANRMFVTLQSVLMEAMKMK 382
>emb|CAD40538.2| OSJNBa0055C08.7 [Oryza sativa (japonica cultivar-group)]
gi|50923881|ref|XP_472301.1| OSJNBa0055C08.7 [Oryza
sativa (japonica cultivar-group)]
Length = 505
Score = 310 bits (793), Expect = 6e-83
Identities = 156/332 (46%), Positives = 228/332 (67%), Gaps = 6/332 (1%)
Query: 2 TSLVASQFSLHIRYVQRIWKLAE---NKGVHADVSSKRAGNCGRKRV-VDLDRVRDIPLK 57
TS+VA +F + IR VQRIWK A+ +G+ +V S++ G+ GRK+V VDL + IPL+
Sbjct: 175 TSIVAREFHVSIRTVQRIWKKAKVCREQGIAVNVDSRKHGSSGRKKVEVDLSLIAAIPLQ 234
Query: 58 KRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGNKA-RLQFCISMLDSASI 116
+++ IR L++AL V + TL R + IR++SN++KP L E NK RL++C+SMLD +++
Sbjct: 235 QKSNIRSLAQALGVPKSTLHRWFKEGLIRRHSNSLKPYLKEANKKERLRWCVSMLDPSTL 294
Query: 117 DHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARP 176
+ P F M N +HIDEKWF +K K FYL DEE+P F+ +KN I K+MFL A+A P
Sbjct: 295 PNSPKFIEMENIIHIDEKWFNGSKKEKTFYLYPDEEEPYFTVHNKNAIDKVMFLAAVANP 354
Query: 177 RFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVP 236
RFD +G F GKI +P + +EPA+R S NR GTL TKPI+ + RN I+ ++ +V+P
Sbjct: 355 RFDDEGNCTFDGKICIWPFVRKEPAQRRSRNRERGTLVTKPIK-VDRNTIRSFMISKVLP 413
Query: 237 SMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLD 296
++ WP E+ G+ I+IQQDNA+TH+ D+ F +Q G DIRLV QPPNSPD+N LD
Sbjct: 414 AIRACWPREDAGKTIWIQQDNARTHLPINDEQFAVAVAQTGLDIRLVNQPPNSPDMNCLD 473
Query: 297 LGFFRSIQALQHKKSPNSVDDLVDAVQKSFEE 328
LGFF S+Q+L + ++ ++D+L++ V K + +
Sbjct: 474 LGFFASLQSLTYNRTSRNMDELIENVHKEYRD 505
>ref|XP_493795.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 330
Score = 280 bits (717), Expect = 4e-74
Identities = 147/307 (47%), Positives = 207/307 (66%), Gaps = 6/307 (1%)
Query: 2 TSLVASQFSLHIRYVQRIWKLAE---NKGVHADVSSKRAGNCGRKRV-VDLDRVRDIPLK 57
T LVA +F + IR VQRIWK A+ +G+ +V S++ GN RK+V +DL + IPL
Sbjct: 25 TRLVAQEFHVSIRTVQRIWKRAKICHEQGITVNVDSRKHGNSRRKKVEIDLSVIAAIPLH 84
Query: 58 KRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGNKA-RLQFCISMLDSASI 116
+R+TIR L++AL VS+ TL R + IR++SN++KP L E NK RLQ+C+SMLD ++
Sbjct: 85 QRSTIRSLAQALGVSKSTLHRWFKEGLIRRHSNSLKPYLKEANKKERLQWCVSMLDPHTL 144
Query: 117 DHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARP 176
++P F M N +HIDEKWF +K K FYL E++P F+ +KN I K+MFL A+A+P
Sbjct: 145 PNNPKFIEMENIIHIDEKWFNASKKEKTFYLYPGEKEPYFTVHNKNAIDKVMFLSAVAKP 204
Query: 177 RFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVP 236
R+ +G F GKIG +P +EPA+R S NR GTL TK I+ + R+ I+ ++ +V+P
Sbjct: 205 RYGDEGNCTFDGKIGIWPFTRKEPAQRRSRNRERGTLVTKLIK-VDRDTIRSFMISKVLP 263
Query: 237 SMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLD 296
++ WP E+ + I+IQQDNA+TH+ +D F +Q G DIRLV QPPNSPD+N LD
Sbjct: 264 AIRACWPREDARKTIWIQQDNARTHLTIDDAQFGVAVAQTGLDIRLVNQPPNSPDMNCLD 323
Query: 297 LGFFRSI 303
LGFF S+
Sbjct: 324 LGFFASL 330
>emb|CAE01628.2| OSJNBa0029H02.9 [Oryza sativa (japonica cultivar-group)]
gi|50926093|ref|XP_473053.1| OSJNBa0029H02.9 [Oryza
sativa (japonica cultivar-group)]
Length = 442
Score = 268 bits (684), Expect = 3e-70
Identities = 154/397 (38%), Positives = 226/397 (56%), Gaps = 60/397 (15%)
Query: 2 TSLVASQFSLHIRYVQRIWKLAENK---GVHADVSSKRAGNCG-RKRVVDLDRVRDIPLK 57
T VA F++ I+ +QRIWK A + G+ DV +++ CG K +DL ++ IPL
Sbjct: 99 TKKVAEYFNVGIQVIQRIWKHAREQVALGLKVDVDNRKTRCCGPNKMEIDLSKIATIPLN 158
Query: 58 KRTTIRDLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTEGNKARLQFCISMLDSASID 117
+R+ +R +N++ ++
Sbjct: 159 RRSN-----------------------LRSLANSLGVSIA-------------------- 175
Query: 118 HDPIFKGMYNTVHIDEKWFYLKEKSKK-FYLVHDEEDPIFSCQSKNYIPKIMFLVAIARP 176
TVH K K KK +YL+ +EEDP+ + Q+KN I K+MFL AIARP
Sbjct: 176 ----------TVHQKFKLVVDMTKRKKTYYLLPEEEDPLRTVQNKNRIGKVMFLTAIARP 225
Query: 177 RFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVP 236
RFD +G FSGKIG +P + PA R S NR GTLETK I ++ R+V+++ ++E+V+P
Sbjct: 226 RFDEEGNVTFSGKIGTWPFVKEVPAIRKSRNRTIGTLETKSI-IVNRDVMRQFLIEKVIP 284
Query: 237 SMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLD 296
++ LWP E+ G I+IQQDNA+TH+ D F + G +I+L +QP NSPD+NVLD
Sbjct: 285 AIQSLWPEEDIGDTIYIQQDNARTHVPPNDPHFLQAVAATGLNIQL-KQPSNSPDMNVLD 343
Query: 297 LGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVKGTHN 356
LGFF SIQ+L + SP ++ +L+ AVQ+ F+ Y+ NR+FL+LQ CM+E+MK G +
Sbjct: 344 LGFFSSIQSLTNCSSPKTIQELIHAVQEEFDGYEASKINRVFLTLQLCMLEVMKDNGGNR 403
Query: 357 YKIPHMKKEQLERRKELPTQRKCDIQLVQEVLSYLDQ 393
YKIPHM K+ LER LP+ CD ++ ++ L L+Q
Sbjct: 404 YKIPHMNKQALEREGRLPSWLSCDARVYEKALDCLEQ 440
>gb|AAM97157.1| transposon protein, putative, mariner sub-class [Oryza sativa
(japonica cultivar-group)] gi|50918137|ref|XP_469465.1|
putative transposase [Oryza sativa (japonica
cultivar-group)]
Length = 437
Score = 253 bits (645), Expect = 9e-66
Identities = 132/301 (43%), Positives = 190/301 (62%), Gaps = 13/301 (4%)
Query: 91 AIKPALTEGNKARLQFCISMLDSASIDHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHD 150
AI AL G L+ S LD ++ ++P F M N VHIDEKWF +K++ FY+VH
Sbjct: 145 AIYDALLRGT---LRSFASALDPHTLPNEPKFVDMRNIVHIDEKWFNTTKKTRNFYMVHW 201
Query: 151 EEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKIGAFPLITREPARRSSVNRPA 210
E+D Q+ N I K+MFL A+ARPR++ +G F+GK EPA+R+S NRP
Sbjct: 202 EDDLYRPVQNNNSIDKVMFLAAVARPRYNEEGICTFNGK---------EPAQRTSQNRPR 252
Query: 211 GTLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFR 270
GTL TK I+ + R+ ++ ++ +V+ +++ WP E I IQQDNA +H+ +D F
Sbjct: 253 GTLVTKTIK-VDRDTVRSFLIAKVLQAIISCWPREHAHNTILIQQDNAPSHVLVDDPQFA 311
Query: 271 CVASQNGFDIRLVRQPPNSPDLNVLDLGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYD 330
SQ GFDIRL+ QPPNSPD+N LDLGFF S+Q+L +++ ++D+L+D V++ F YD
Sbjct: 312 YAVSQTGFDIRLMNQPPNSPDMNALDLGFFASLQSLTYRRISRNMDELIDNVEQEFHAYD 371
Query: 331 TILSNRIFLSLQSCMIEIMKVKGTHNYKIPHMKKEQLERRKELPTQRKCDIQLVQEVLSY 390
NR+FL+LQSC++E+M+ G + Y+IPHM KE+L+R LP C L +V S
Sbjct: 372 DSKLNRVFLTLQSCLLEVMEANGGNGYRIPHMGKERLQRLHMLPKTLSCGCDLYDKVRSA 431
Query: 391 L 391
L
Sbjct: 432 L 432
>gb|AAP53116.1| putative transposable element [Oryza sativa (japonica
cultivar-group)] gi|37533054|ref|NP_920829.1| putative
transposable element [Oryza sativa (japonica
cultivar-group)] gi|15451589|gb|AAK98713.1| Putative
transposable element [Oryza sativa]
Length = 397
Score = 250 bits (638), Expect = 6e-65
Identities = 120/235 (51%), Positives = 168/235 (71%)
Query: 103 RLQFCISMLDSASIDHDPIFKGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKN 162
RL++CI MLD S+ H+P+FK +++ + I EKWF + K+ ++Y I Q+KN
Sbjct: 156 RLKWCIEMLDPRSVPHNPVFKPLFDYIFIYEKWFNITRKTVQYYAAPTASRRIRIIQNKN 215
Query: 163 YIPKIMFLVAIARPRFDAQGKEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLIT 222
+IPKIM L A+ARPRFD+ G IF GKIG FP +T A+RSSVN PAGT+E KPI+ IT
Sbjct: 216 FIPKIMILTALARPRFDSNGNCIFDGKIGCFPFVTYTAAKRSSVNHPAGTIEMKPIESIT 275
Query: 223 RNVIKKCVLEQVVPSMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRL 282
+ VI+ +E+V+P++ WP E+ G+PI+IQQDNA+ HI +D+ F A Q+GF+I+L
Sbjct: 276 KEVIRSFKIEKVLPAVRAKWPREDAGKPIYIQQDNARPHIAPDDRMFCEAAKQDGFNIKL 335
Query: 283 VRQPPNSPDLNVLDLGFFRSIQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRI 337
V QP NSPDLNVLDLGFF SIQ++Q+K + + ++LV A+ ++FE+Y LSN I
Sbjct: 336 VCQPANSPDLNVLDLGFFNSIQSIQYKSASTTTEELVAAIDRAFEDYPVRLSNMI 390
>gb|AAL69350.1| transposase [Tripsacum pilosum]
Length = 128
Score = 167 bits (424), Expect = 4e-40
Identities = 78/128 (60%), Positives = 101/128 (77%)
Query: 131 IDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKI 190
IDEKWFYL KS+ +Y++ DE P +C+SKN IPKIMFL +ARPRFD+ G IF GKI
Sbjct: 1 IDEKWFYLTRKSEGYYVMPDEYVPHRTCKSKNNIPKIMFLTVVARPRFDSNGVCIFDGKI 60
Query: 191 GAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQP 250
G FPL+T EPA+RSSVNRPAGT+E KPI IT+ VI+ ++++V+P++ WP+E+R +P
Sbjct: 61 GCFPLVTYEPAKRSSVNRPAGTMEIKPIPSITKEVIRDFMIQKVLPAIRAKWPVEDRNKP 120
Query: 251 IFIQQDNA 258
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69349.1| transposase [Glycine max]
Length = 128
Score = 165 bits (417), Expect = 3e-39
Identities = 74/128 (57%), Positives = 102/128 (78%)
Query: 131 IDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKI 190
IDEKWFY+ +KS+++YL+ DE+ P SC+SKN++PK+MFL A+ARPRFD++ FSGKI
Sbjct: 1 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTAVARPRFDSEKNVTFSGKI 60
Query: 191 GAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQP 250
G FP +T+EPA+R+SVNR AGT+ETK I I R++I+ +E+V+P+ E+WP +E G
Sbjct: 61 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSVFIEKVLPATKEVWPRDELGST 120
Query: 251 IFIQQDNA 258
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69340.1| transposase [Pariana radiciflora]
Length = 128
Score = 155 bits (393), Expect = 2e-36
Identities = 73/128 (57%), Positives = 96/128 (74%)
Query: 131 IDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKI 190
IDEKWFY +K++ +YL +DE DP S Q+KN+I KIMFL IARPR+D +G FSGKI
Sbjct: 1 IDEKWFYRTKKNQTYYLANDEPDPERSTQNKNFIEKIMFLAGIARPRYDGEGNVTFSGKI 60
Query: 191 GAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQP 250
G FP I EPA+RSSVNRPAGTL TK + +T+ + ++ ++ +V+P++ + WP EE G P
Sbjct: 61 GIFPFIFIEPAKRSSVNRPAGTLVTKVLPSVTKEISREYIVSKVLPAIKDKWPAEECGLP 120
Query: 251 IFIQQDNA 258
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69354.1| transposase [Zea diploperennis]
Length = 127
Score = 154 bits (390), Expect = 3e-36
Identities = 74/128 (57%), Positives = 100/128 (77%), Gaps = 1/128 (0%)
Query: 131 IDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKI 190
IDEKWF+L KS+++YL+ DE+DP +C+SKN IPK+MFL A +RPRF+ G F GKI
Sbjct: 1 IDEKWFFLTRKSERYYLLPDEDDPHRTCKSKNNIPKLMFLCATSRPRFE-NGVCTFDGKI 59
Query: 191 GAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQP 250
G FPL+T E A+RSSVNRPAGT+E KPI I R+VI++ ++E+V+P++ WP +E +P
Sbjct: 60 GCFPLVTFERAKRSSVNRPAGTMEVKPITSIKRDVIREFLIEKVLPAIRAKWPRDELNKP 119
Query: 251 IFIQQDNA 258
I+IQQDNA
Sbjct: 120 IYIQQDNA 127
>gb|AAL69339.1| transposase [Cynodon dactylon]
Length = 128
Score = 151 bits (382), Expect = 3e-35
Identities = 69/128 (53%), Positives = 96/128 (74%)
Query: 131 IDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKI 190
IDEKWF + K++++Y V DEE P +C+SKN+IPK+M L A+ARP FD+QG F GKI
Sbjct: 1 IDEKWFNITRKNERYYAVPDEEQPERTCKSKNHIPKLMILSAVARPSFDSQGNCTFDGKI 60
Query: 191 GAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQP 250
G FP I E A+RSSVNRP GT+E KP+ +T++VI++ ++E+V+P++ WP E+ +
Sbjct: 61 GCFPFIRFEAAKRSSVNRPVGTIEMKPLDSVTKDVIREYMIEKVLPAIRSKWPAEDAHKT 120
Query: 251 IFIQQDNA 258
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69348.1| transposase [Iris x nelsonii] gi|18419515|gb|AAL69347.1|
transposase [Iris fulva]
Length = 128
Score = 150 bits (378), Expect = 8e-35
Identities = 70/128 (54%), Positives = 95/128 (73%)
Query: 131 IDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKI 190
IDEKWFY+ +K++ +YL EEDP+ +CQSKNYI K+MFL A+ARPRFD +GK++FSGKI
Sbjct: 1 IDEKWFYMTKKTETYYLHPMEEDPLRTCQSKNYIGKVMFLAAMARPRFDNEGKKVFSGKI 60
Query: 191 GAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQP 250
G FP +T + A++ S N GTLE KPI + R IK ++E+V+P + E+W E+ +
Sbjct: 61 GIFPFVTMQTAKKRSKNIEVGTLEIKPITSVKRENIKSFLIEKVIPKIHEMWLEEDSRKT 120
Query: 251 IFIQQDNA 258
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69335.1| transposase [Arundinaria simonii]
Length = 128
Score = 149 bits (377), Expect = 1e-34
Identities = 69/128 (53%), Positives = 92/128 (70%)
Query: 131 IDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSGKI 190
IDEKWFY K +K+YL +EE P + +SKN+I K+MFL AIARPRFD G E FSGKI
Sbjct: 1 IDEKWFYRTRKCQKYYLALEEERPQRTVKSKNFIEKVMFLAAIARPRFDVDGNETFSGKI 60
Query: 191 GAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQP 250
G FP + EPA+R+S NRP GT+ TK + +T+ + ++ +V+P++ E WP+E+R P
Sbjct: 61 GIFPFTSTEPAKRTSANRPRGTMVTKAMTSVTKETSRAYLVNKVLPAIKEKWPLEDRESP 120
Query: 251 IFIQQDNA 258
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 632,617,572
Number of Sequences: 2540612
Number of extensions: 26063524
Number of successful extensions: 62675
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 62558
Number of HSP's gapped (non-prelim): 89
length of query: 393
length of database: 863,360,394
effective HSP length: 130
effective length of query: 263
effective length of database: 533,080,834
effective search space: 140200259342
effective search space used: 140200259342
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)
Medicago: description of AC144766.5