BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144765.1 + phase: 0 /pseudo
         (52 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAS58488.1| putative transposase [Triticum monococcum]              44  0.002
ref|NP_917688.1| P0686E09.10 [Oryza sativa (japonica cultivar-gr...    42  0.003
gb|AAX95707.1| FAR1 family, putative [Oryza sativa (japonica cul...    40  0.013
gb|AAP55110.1| putative transposase [Oryza sativa (japonica cult...    38  0.064
ref|NP_197397.1| far-red impaired responsive protein, putative [...    33  2.7
ref|XP_507459.1| PREDICTED OJ1135_F06.10-1 gene product [Oryza s...    32  4.6

>gb|AAS58488.1| putative transposase [Triticum monococcum]
          Length = 751

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 22/49 (44%), Positives = 29/49 (58%), Gaps = 1/49 (2%)

Query: 2  EEANKFWLAYSFRVGFGVRVRFANKR-EDGSVSSCRMLYEGSVNTWYVK 49
          +EA  FWL YS + GF VR R+ N+R  DG V+SCR +     + W  K
Sbjct: 7  DEAWAFWLTYSGQKGFEVRKRYTNRRPTDGKVTSCRFVCANEGHRWQDK 55


>ref|NP_917688.1| P0686E09.10 [Oryza sativa (japonica cultivar-group)]
          Length = 1066

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 2  EEANKFWLAYSFRVGFGVRVRFANK-REDGSVSSCRML 38
          +EA  FWL+YS + GF VR R+ N+ + DGSV+SCR +
Sbjct: 7  DEAWAFWLSYSGQKGFEVRKRYTNRSKSDGSVTSCRFV 44


>gb|AAX95707.1| FAR1 family, putative [Oryza sativa (japonica cultivar-group)]
          Length = 1113

 Score = 40.4 bits (93), Expect = 0.013
 Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)

Query: 1   MEEANKFWLAYSFRVGFGVRVRFANKRE-DGSVSSCR 36
           ++EA  FW++Y  + GF VR R++NKR+ DG V SCR
Sbjct: 260 VDEAWMFWVSYGGQKGFEVRKRYSNKRKSDGKVRSCR 296


>gb|AAP55110.1| putative transposase [Oryza sativa (japonica cultivar-group)]
           gi|37537042|ref|NP_922823.1| putative transposase [Oryza
           sativa (japonica cultivar-group)]
           gi|19224996|gb|AAL86472.1| putative transposase [Oryza
           sativa (japonica cultivar-group)]
           gi|49614722|dbj|BAD26733.1| putative transposase [Oryza
           sativa (japonica cultivar-group)]
          Length = 486

 Score = 38.1 bits (87), Expect = 0.064
 Identities = 19/36 (52%), Positives = 24/36 (65%), Gaps = 1/36 (2%)

Query: 2   EEANKFWLAYSFRVGFGVRVRFANKRE-DGSVSSCR 36
           +EA  FW +Y  + GF VR R+ NKR+ DG V SCR
Sbjct: 65  DEAWMFWNSYGGQKGFEVRKRYTNKRKSDGKVRSCR 100


>ref|NP_197397.1| far-red impaired responsive protein, putative [Arabidopsis
          thaliana]
          Length = 788

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 18/38 (47%), Positives = 24/38 (62%), Gaps = 1/38 (2%)

Query: 2  EEANKFWLAYSFRVGFGVRV-RFANKREDGSVSSCRML 38
          EEA +F+ AY+ R GF VR  +    R DG+VSS R +
Sbjct: 53 EEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFV 90


>ref|XP_507459.1| PREDICTED OJ1135_F06.10-1 gene product [Oryza sativa (japonica
           cultivar-group)] gi|51963940|ref|XP_506753.1| PREDICTED
           OJ1135_F06.10-1 gene product [Oryza sativa (japonica
           cultivar-group)]
          Length = 721

 Score = 32.0 bits (71), Expect = 4.6
 Identities = 15/32 (46%), Positives = 20/32 (61%)

Query: 3   EANKFWLAYSFRVGFGVRVRFANKREDGSVSS 34
           EA  F+ +Y+  VGF +R   AN R DGS+ S
Sbjct: 85  EAYDFYNSYARNVGFSIRKNHANTRADGSLCS 116


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.322    0.134    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,398,940
Number of Sequences: 2540612
Number of extensions: 2199719
Number of successful extensions: 3772
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3766
Number of HSP's gapped (non-prelim): 7
length of query: 52
length of database: 863,360,394
effective HSP length: 28
effective length of query: 24
effective length of database: 792,223,258
effective search space: 19013358192
effective search space used: 19013358192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)