BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144731.7 + phase: 0
(228 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB08227.1| MADS-box protein-like [Arabidopsis thaliana] gi|... 177 2e-43
gb|AAN52800.1| MADS-box protein AGL62 [Arabidopsis thaliana] 154 2e-36
gb|AAY78694.1| MADS-box family protein [Arabidopsis thaliana] gi... 140 3e-32
gb|AAD23028.1| putative MADS-box protein [Arabidopsis thaliana] ... 140 3e-32
gb|AAN52795.1| MADS-box protein AGL28 [Arabidopsis thaliana] gi|... 137 2e-31
emb|CAA73304.1| MADS-box protein [Arabidopsis thaliana] 137 2e-31
gb|AAN52794.1| MADS-box protein AGL23 [Arabidopsis thaliana] gi|... 135 9e-31
gb|AAN52798.1| MADS-box protein AGL40 [Arabidopsis thaliana] gi|... 128 1e-28
gb|AAO42470.1| putative MADS-box transcription factor [Arabidops... 106 6e-22
dbj|BAD45640.1| MADS-box protein-like [Oryza sativa (japonica cu... 105 7e-22
gb|AAO43321.1| putative MADS-box transcription factor [Arabidops... 105 1e-21
gb|AAO43327.1| putative MADS-box transcription factor [Arabidops... 105 1e-21
gb|AAO43325.1| putative MADS-box transcription factor [Arabidops... 104 2e-21
gb|AAO43320.1| putative MADS-box transcription factor [Arabidops... 104 2e-21
gb|AAO43326.1| putative MADS-box transcription factor [Arabidops... 103 3e-21
gb|AAO43323.1| putative MADS-box transcription factor [Arabidops... 101 1e-20
dbj|BAD61881.1| MADS-box protein-like [Oryza sativa (japonica cu... 101 1e-20
gb|AAY78782.1| MADS-box family protein [Arabidopsis thaliana] gi... 100 2e-20
gb|AAM14943.1| MADS-box protein (AGL29) [Arabidopsis thaliana] g... 100 5e-20
ref|XP_450050.1| MADS-box protein-like [Oryza sativa (japonica c... 99 9e-20
>dbj|BAB08227.1| MADS-box protein-like [Arabidopsis thaliana]
gi|15239333|ref|NP_200852.1| MADS-box protein (AGL62)
[Arabidopsis thaliana]
Length = 299
Score = 177 bits (450), Expect = 2e-43
Identities = 98/185 (52%), Positives = 128/185 (68%), Gaps = 7/185 (3%)
Query: 4 VRKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFS 63
V+K +GRQKIEM K+ NESNLQVTFSK +GLFKKASELCTLCGA+VA+VVFSP KVFS
Sbjct: 2 VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61
Query: 64 FGHPNLDTVIDRFL--SLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGD 121
FGHPN+D+VIDRF+ + +P MQ E RN+ V++LN LTQ+ + L+ EKK D
Sbjct: 62 FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121
Query: 122 ELSNLHKETEA-KFWWACVVDGMNRDQLEIFKKALEELKKLVIQHAA----TRTLPFFVG 176
EL + ++T+A WW V+ + QLE FK LE LKK+V A+ F+VG
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPNFYVG 181
Query: 177 NTSSS 181
++S++
Sbjct: 182 SSSNN 186
>gb|AAN52800.1| MADS-box protein AGL62 [Arabidopsis thaliana]
Length = 279
Score = 154 bits (389), Expect = 2e-36
Identities = 90/183 (49%), Positives = 119/183 (64%), Gaps = 23/183 (12%)
Query: 4 VRKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFS 63
V+K +GRQKIEM K+ NESNLQVTFSK +GLFKKASELCTLCGA+VA+VVFSP KVFS
Sbjct: 2 VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61
Query: 64 FGHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGDEL 123
FGHPN+D+VIDRF++ P + H++ N Q+ + L+ EKK DEL
Sbjct: 62 FGHPNVDSVIDRFINNNP---------LPPHQHNN---------QVLSQLETEKKKYDEL 103
Query: 124 SNLHKETEA-KFWWACVVDGMNRDQLEIFKKALEELKKLVIQHAA----TRTLPFFVGNT 178
+ ++T+A WW V+ + QLE FK LE LKK+V A+ F+VG++
Sbjct: 104 KKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPNFYVGSS 163
Query: 179 SSS 181
S++
Sbjct: 164 SNN 166
>gb|AAY78694.1| MADS-box family protein [Arabidopsis thaliana]
gi|30682571|ref|NP_850058.1| MADS-box family protein
[Arabidopsis thaliana]
Length = 264
Score = 140 bits (353), Expect = 3e-32
Identities = 79/171 (46%), Positives = 111/171 (64%), Gaps = 5/171 (2%)
Query: 1 MSSVRKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGK 60
MS ++ GRQKI M KI ES+ QVTFSK GLFKKASELCTLCGA++ ++VFSP+ K
Sbjct: 55 MSKKKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKK 114
Query: 61 VFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIG 120
FSFGHP++++V+DR++S + Q ++ A+ ELN QLT I + ++ EKK G
Sbjct: 115 PFSFGHPSVESVLDRYVSR-NNMSLAQSQQLQGSPAASC-ELNMQLTHILSEVEEEKKKG 172
Query: 121 DELSNLHKETEAKF---WWACVVDGMNRDQLEIFKKALEELKKLVIQHAAT 168
+ + KE+ + WW V+ MN QL+ K ALEEL+K V+ + A+
Sbjct: 173 QAMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMAS 223
>gb|AAD23028.1| putative MADS-box protein [Arabidopsis thaliana]
gi|25412255|pir||B84641 probable MADS-box protein
[imported] - Arabidopsis thaliana
Length = 210
Score = 140 bits (353), Expect = 3e-32
Identities = 79/171 (46%), Positives = 111/171 (64%), Gaps = 5/171 (2%)
Query: 1 MSSVRKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGK 60
MS ++ GRQKI M KI ES+ QVTFSK GLFKKASELCTLCGA++ ++VFSP+ K
Sbjct: 1 MSKKKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKK 60
Query: 61 VFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIG 120
FSFGHP++++V+DR++S + Q ++ A+ ELN QLT I + ++ EKK G
Sbjct: 61 PFSFGHPSVESVLDRYVSR-NNMSLAQSQQLQGSPAASC-ELNMQLTHILSEVEEEKKKG 118
Query: 121 DELSNLHKETEAKF---WWACVVDGMNRDQLEIFKKALEELKKLVIQHAAT 168
+ + KE+ + WW V+ MN QL+ K ALEEL+K V+ + A+
Sbjct: 119 QAMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMAS 169
>gb|AAN52795.1| MADS-box protein AGL28 [Arabidopsis thaliana]
gi|15223420|ref|NP_171660.1| MADS-box protein (AGL28)
[Arabidopsis thaliana] gi|25513716|pir||H86145 F22L4.7
protein - Arabidopsis thaliana gi|8920589|gb|AAF81311.1|
Contains strong similarity (practically identical) to a
MADS-box protein from Arabidopsis thaliana gi|2505875
and contains a SRF-type transcription factor
(DNA-binding and dimerisation) PF|00319 domain
Length = 247
Score = 137 bits (345), Expect = 2e-31
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 8/183 (4%)
Query: 5 RKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFSF 64
RK GR+KIE+ K++NESNLQVTFSK +GLFKK SELCTLC A++A++VFSPSGK +SF
Sbjct: 3 RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62
Query: 65 GHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGDEL- 123
GHPN++ ++D L + N+ F E+ ++ LN LT++ + E++ +
Sbjct: 63 GHPNVNKLLDHSLGRVIRHNN--TNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIV 120
Query: 124 SNLHKETEAKFWWACVVDGMNRDQLEIFKKALEELKKLVIQHAAT---RTLPFFVGNTSS 180
N + +A+ WW +N Q K LE LKK V + A R L F+VG SS
Sbjct: 121 QNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHHRNLNFYVG--SS 178
Query: 181 SNI 183
SN+
Sbjct: 179 SNV 181
>emb|CAA73304.1| MADS-box protein [Arabidopsis thaliana]
Length = 244
Score = 137 bits (345), Expect = 2e-31
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 8/183 (4%)
Query: 5 RKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFSF 64
RK GR+KIE+ K++NESNLQVTFSK +GLFKK SELCTLC A++A++VFSPSGK +SF
Sbjct: 3 RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62
Query: 65 GHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGDEL- 123
GHPN++ ++D L + N+ F E+ ++ LN LT++ + E++ +
Sbjct: 63 GHPNVNKLLDHSLGRVIRHNN--TNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIV 120
Query: 124 SNLHKETEAKFWWACVVDGMNRDQLEIFKKALEELKKLVIQHAAT---RTLPFFVGNTSS 180
N + +A+ WW +N Q K LE LKK V + A R L F+VG SS
Sbjct: 121 QNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHHRNLNFYVG--SS 178
Query: 181 SNI 183
SN+
Sbjct: 179 SNV 181
>gb|AAN52794.1| MADS-box protein AGL23 [Arabidopsis thaliana]
gi|15218647|ref|NP_176715.1| MADS-box protein (AGL23)
[Arabidopsis thaliana] gi|3335343|gb|AAC27145.1|
Contains similarity to gb|L46397 MADS box protein (ZAG3)
from Zea mays. [Arabidopsis thaliana]
gi|7487795|pir||T02359 hypothetical protein T8F5.14 -
Arabidopsis thaliana
Length = 226
Score = 135 bits (340), Expect = 9e-31
Identities = 75/183 (40%), Positives = 116/183 (62%), Gaps = 7/183 (3%)
Query: 4 VRKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFS 63
V+K GR+K+E+ K++ ESNLQVTFSK GLFKKASE CTLC A +A++VFSP+GKVFS
Sbjct: 2 VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61
Query: 64 FGHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGDEL 123
FGHPN+D ++D F + N+ + E++ +V+ LN T++ ++ E+K
Sbjct: 62 FGHPNVDVLLDHFRGCVVGHNNTNLD--ESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSR 119
Query: 124 SNLHKETE-AKFWWACVVDGMNRDQLEIFKKALEELKKLVIQHAAT---RTLP-FFVGNT 178
+ +E E A+ WW+ +N Q + L++LKK+V + A +T P F+VG++
Sbjct: 120 AQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTNPNFYVGSS 179
Query: 179 SSS 181
S++
Sbjct: 180 SNA 182
>gb|AAN52798.1| MADS-box protein AGL40 [Arabidopsis thaliana]
gi|4006904|emb|CAB16834.1| putative MADS-box protein
[Arabidopsis thaliana] gi|7270607|emb|CAB80325.1|
putative MADS-box protein [Arabidopsis thaliana]
gi|21592306|gb|AAM64257.1| putative MADS-box protein
[Arabidopsis thaliana] gi|15234456|ref|NP_195377.1|
MADS-box protein (AGL40) [Arabidopsis thaliana]
gi|25407742|pir||A85432 probable MADS-box protein
[imported] - Arabidopsis thaliana
Length = 248
Score = 128 bits (322), Expect = 1e-28
Identities = 86/239 (35%), Positives = 128/239 (52%), Gaps = 15/239 (6%)
Query: 4 VRKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFS 63
VR +GRQKIEMKK+ NESNLQVTFSK GLFKKASELCTL GA++ L+VFSP GKVFS
Sbjct: 2 VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61
Query: 64 FGHPNLDTVIDRFL-----SLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKK 118
FGHP++ +I RF S I + +Q +E + N++ LN LT++ + EK+
Sbjct: 62 FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQ 121
Query: 119 IGDELSNLHKETE-AKFWWACVVDGMNRDQLEIFKKALEELKKLVI----QHAATRTLPF 173
L L + E W+ V ++ ++ AL+++KK ++ Q++
Sbjct: 122 KRMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVNVSQN 181
Query: 174 FVGNTS----SSNIYLHHQPNPQQAEMF-PPQIFQNAMLQLQTHFFDGSMIPHHVFNNM 227
+ G +S N+ + + A + P +F N + + DG ++P N M
Sbjct: 182 YFGQSSGVIGGGNVGIDLFDQRRNAFNYNPNMVFPNHTPPMFGYNNDGVLVPISNMNYM 240
>gb|AAO42470.1| putative MADS-box transcription factor [Arabidopsis lyrata]
Length = 166
Score = 106 bits (264), Expect = 6e-22
Identities = 58/152 (38%), Positives = 94/152 (61%), Gaps = 6/152 (3%)
Query: 34 GLFKKASELCTLCGADVALVVFSPSGKVFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEA 93
GLFKK+SELCTLC A++A++VFSPSGKV+SFGHPN++ ++D+F + N+ + E+
Sbjct: 1 GLFKKSSELCTLCDAEIAIIVFSPSGKVYSFGHPNVNVLLDQFSERVLRHNNTNLD--ES 58
Query: 94 HRNANVRELNAQLTQINNTLDAEKKIGDELSNLHKETE-AKFWWACVVDGMNRDQLEIFK 152
H +++ LN LT+ + E++ + L +E + + WW + +N QL K
Sbjct: 59 HTKLHIQMLNESLTEAMAEKEKEQRKKEWLVQNEREIKNVEEWWTNSLKELNLTQLTSMK 118
Query: 153 KALEELKKLVIQHAA---TRTLPFFVGNTSSS 181
ALE+LKK V + A+ F+VG++S++
Sbjct: 119 HALEDLKKEVNERASLFHQSNSNFYVGSSSNA 150
>dbj|BAD45640.1| MADS-box protein-like [Oryza sativa (japonica cultivar-group)]
Length = 210
Score = 105 bits (263), Expect = 7e-22
Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 5 RKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFSF 64
R GRQ+IE+++I N QVTFSK NGLFKKASEL TLCGA VA+V FS +G VF+F
Sbjct: 7 RPSLGRQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAF 66
Query: 65 GHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEK----KIG 120
G P +D V+ RF L D +E + A +++ AE+ ++
Sbjct: 67 GQPTVDAVVRRFDPLHADGADPAPAAVEDGGGGGDDVVVADPEELDALRRAEEQTKAQVA 126
Query: 121 DELSNLH----KETEA----KFWWACVVDGMNRDQLEIFKKALEELKKLVIQHAAT 168
E + + K T+A WW V+ + +L F +ALE L+ V +HA+T
Sbjct: 127 AEQARMRDVGDKVTQAMAGRALWWEADVEALGEAELPEFVRALERLRDSVHRHAST 182
>gb|AAO43321.1| putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 105 bits (262), Expect = 1e-21
Identities = 59/153 (38%), Positives = 94/153 (60%), Gaps = 7/153 (4%)
Query: 34 GLFKKASELCTLCGADVALVVFSPSGKVFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEA 93
GLFKKASELCTLC A +A++VFSP+GKVFSFGHPN+D ++D F + N+ + E+
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHFRGCVVRHNNTNLD--ES 58
Query: 94 HRNANVRELNAQLTQINNTLDAEKKIGDELSNLHKETE-AKFWWACVVDGMNRDQLEIFK 152
+ +V+ LN T++ ++ E+K + +E E A+ WW+ +N Q
Sbjct: 59 YTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQNERENENAEEWWSKSPLELNLSQSTCMI 118
Query: 153 KALEELKKLVIQHAAT---RTLP-FFVGNTSSS 181
+ L++LKK+V + A +T P F+VG++S++
Sbjct: 119 RVLKDLKKIVDEKAIQLIHQTNPNFYVGSSSNA 151
>gb|AAO43327.1| putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 105 bits (261), Expect = 1e-21
Identities = 59/153 (38%), Positives = 94/153 (60%), Gaps = 7/153 (4%)
Query: 34 GLFKKASELCTLCGADVALVVFSPSGKVFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEA 93
GLFKKASELCTLC A +A++VFSP+GKVFSFGHPN+D ++D F + N+ + E+
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHFRGCVVGHNNTNLD--ES 58
Query: 94 HRNANVRELNAQLTQINNTLDAEKKIGDELSNLHKETE-AKFWWACVVDGMNRDQLEIFK 152
+ +V+ LN T++ ++ E+K + +E E A+ WW+ +N Q
Sbjct: 59 YTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQNERENENAEEWWSKSPLELNLSQSTCMI 118
Query: 153 KALEELKKLVIQHAAT---RTLP-FFVGNTSSS 181
+ L++LKK+V + A +T P F+VG++S++
Sbjct: 119 RVLKDLKKIVDEKAIQLIHQTNPNFYVGSSSNA 151
>gb|AAO43325.1| putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 104 bits (259), Expect = 2e-21
Identities = 58/153 (37%), Positives = 93/153 (59%), Gaps = 7/153 (4%)
Query: 34 GLFKKASELCTLCGADVALVVFSPSGKVFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEA 93
GLFKKASELCTLC A +A++VFSP+GKVFSFGHPN+D ++D F + N+ + E+
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHFRGRVVEHNNTNLD--ES 58
Query: 94 HRNANVRELNAQLTQINNTLDAEKKIGDELSNLHKETE-AKFWWACVVDGMNRDQLEIFK 152
+ +V+ LN T++ ++ E+K + +E E A+ WW+ +N Q
Sbjct: 59 YTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQNERENENAEEWWSKSPLELNLSQSTCMI 118
Query: 153 KALEELKKLVIQ---HAATRTLP-FFVGNTSSS 181
+ L++LKK+V + H +T P F+ G++S++
Sbjct: 119 RVLKDLKKIVDEKAFHLIHQTNPNFYFGSSSNA 151
>gb|AAO43320.1| putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 104 bits (259), Expect = 2e-21
Identities = 58/153 (37%), Positives = 93/153 (59%), Gaps = 7/153 (4%)
Query: 34 GLFKKASELCTLCGADVALVVFSPSGKVFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEA 93
GLFKKASELCTLC A +A++VFSP+GKVFSFGHPN+D ++D F + N+ + E+
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHFRGRVVEHNNTNLD--ES 58
Query: 94 HRNANVRELNAQLTQINNTLDAEKKIGDELSNLHKETE-AKFWWACVVDGMNRDQLEIFK 152
+ +V+ LN T++ ++ E+K + +E E A+ WW+ +N Q
Sbjct: 59 YTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQNERENENAEEWWSKSPLELNLSQSTCMI 118
Query: 153 KALEELKKLVIQ---HAATRTLP-FFVGNTSSS 181
+ L++LKK+V + H +T P F+ G++S++
Sbjct: 119 RVLKDLKKIVDEKAFHLIHQTNPNFYFGSSSNA 151
>gb|AAO43326.1| putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 103 bits (258), Expect = 3e-21
Identities = 59/153 (38%), Positives = 94/153 (60%), Gaps = 7/153 (4%)
Query: 34 GLFKKASELCTLCGADVALVVFSPSGKVFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEA 93
GLFKKASELCTLC A +A++VFSP+GKVFSFGHPN+D ++D F + N+ + E+
Sbjct: 1 GLFKKASELCTLCDAKLAMIVFSPAGKVFSFGHPNVDVLLDHFRGRVVGHNNTNLD--ES 58
Query: 94 HRNANVRELNAQLTQINNTLDAEKKIGDELSNLHKETE-AKFWWACVVDGMNRDQLEIFK 152
+ +V+ LN T++ ++ E+K + +E E A+ WW+ +N Q
Sbjct: 59 YTKLHVQMLNKSYTKVKAEVEKEQKNKQSRAQNERENENAEEWWSKYPLELNLSQSTCMI 118
Query: 153 KALEELKKLVIQHAAT---RTLP-FFVGNTSSS 181
+ L++LKK+V + A +T P F+VG++S++
Sbjct: 119 RVLKDLKKIVDEKAIQLIHQTNPNFYVGSSSNA 151
>gb|AAO43323.1| putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 101 bits (252), Expect = 1e-20
Identities = 57/153 (37%), Positives = 91/153 (59%), Gaps = 7/153 (4%)
Query: 34 GLFKKASELCTLCGADVALVVFSPSGKVFSFGHPNLDTVIDRFLSLIPTQNDGTMQFIEA 93
GLFKKASELCTLC A +A++VFSP+GKVFSFGHPN+D ++D F + N+ + E+
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHFRGRVVEHNNTNLD--ES 58
Query: 94 HRNANVRELNAQLTQINNTLDAEKKIGDELSNLHKETE-AKFWWACVVDGMNRDQLEIFK 152
+ +V+ LN T++ ++ E+K + +E E + WW+ +N Q
Sbjct: 59 YTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQNERENENEEEWWSKSPLELNLSQSTCMI 118
Query: 153 KALEELKKLVIQ---HAATRTLP-FFVGNTSSS 181
L++LKK+V + H +T P F+ G++S++
Sbjct: 119 SVLKDLKKIVDEKAFHLIHQTNPNFYFGSSSNA 151
>dbj|BAD61881.1| MADS-box protein-like [Oryza sativa (japonica cultivar-group)]
gi|50725502|dbj|BAD32972.1| MADS-box protein-like [Oryza
sativa (japonica cultivar-group)]
Length = 238
Score = 101 bits (252), Expect = 1e-20
Identities = 63/158 (39%), Positives = 92/158 (57%), Gaps = 6/158 (3%)
Query: 10 RQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFSFGHPNL 69
++KIE+K+I NE QV FSK +FKKASEL T+CGA+VA++V SP+GK FSFG P++
Sbjct: 3 KRKIEIKRIKNEEARQVCFSKRRPSVFKKASELYTVCGAEVAMLVKSPAGKFFSFGAPSV 62
Query: 70 DTVIDRFLSLIPTQNDGTMQFIEAHRNA---NVRELNAQLTQINNTLDAEKKIGDELSNL 126
V+ RF + ++ +M H N+ + ELN Q ++ N L A+ + L +
Sbjct: 63 GFVLSRFHATTTSRKHSSMGVTIQHDNSATIKLHELNQQHIELQNQLQAQNEKMKALQEV 122
Query: 127 -HKETEAKF--WWACVVDGMNRDQLEIFKKALEELKKL 161
KE+ K W V+ + ++ LE FK LE LK L
Sbjct: 123 AKKESGGKVMGWLNSKVEDICQEDLEEFKMVLESLKYL 160
>gb|AAY78782.1| MADS-box family protein [Arabidopsis thaliana]
gi|12321914|gb|AAG50993.1| SRF-type transcription
factor; 29224-29760 [Arabidopsis thaliana]
gi|15230767|ref|NP_187320.1| MADS-box family protein
[Arabidopsis thaliana]
Length = 178
Score = 100 bits (250), Expect = 2e-20
Identities = 62/156 (39%), Positives = 89/156 (56%), Gaps = 15/156 (9%)
Query: 9 GRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFSFGHPN 68
GR+KI+M+K+ + + QVTFSK GLFKKASEL TLC A+V +VVFSP K +SFG PN
Sbjct: 2 GRRKIKMEKVQDTNTKQVTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKPYSFGKPN 61
Query: 69 LDTVIDRFLSLIPTQNDG----TMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGDELS 124
D + +RF + + +G T + +R +++ +L I +AEKK G++
Sbjct: 62 FDVIAERFKNEFEEEEEGDSCETSGYSRGNRARQEKKICKRLNSITEEAEAEKKHGED-- 119
Query: 125 NLHKETEAKFWWACVVDGMNRDQLEIFKKALEELKK 160
LHK E + D N+ E+ LEELK+
Sbjct: 120 -LHKWLE-----SAEQDKFNKPIEEL---TLEELKE 146
>gb|AAM14943.1| MADS-box protein (AGL29) [Arabidopsis thaliana]
gi|3128222|gb|AAC26702.1| MADS-box protein (AGL29)
[Arabidopsis thaliana] gi|15226309|ref|NP_180991.1|
MADS-box family protein [Arabidopsis thaliana]
gi|7487950|pir||T02331 MADS box protein (AGL29)
[imported] - Arabidopsis thaliana
Length = 172
Score = 99.8 bits (247), Expect = 5e-20
Identities = 57/148 (38%), Positives = 89/148 (59%), Gaps = 2/148 (1%)
Query: 9 GRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFSFGHPN 68
GR+KI+M+ + + + QVTFSK GLFKKASEL TLC A++ +VVFSP GK FS+G PN
Sbjct: 2 GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61
Query: 69 LDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGDELSNLHK 128
LD+V +RF+ + G + +R ++ L+ +L +N ++AEK+ G E S
Sbjct: 62 LDSVAERFMREYDDSDSGDEEKSGNYR-PKLKRLSERLDLLNQEVEAEKERG-EKSQEKL 119
Query: 129 ETEAKFWWACVVDGMNRDQLEIFKKALE 156
E+ + ++ + D+L +K L+
Sbjct: 120 ESAGDERFKESIETLTLDELNEYKDRLQ 147
>ref|XP_450050.1| MADS-box protein-like [Oryza sativa (japonica cultivar-group)]
gi|46806648|dbj|BAD17728.1| MADS-box protein-like [Oryza
sativa (japonica cultivar-group)]
gi|46806462|dbj|BAD17598.1| MADS-box protein-like [Oryza
sativa (japonica cultivar-group)]
Length = 210
Score = 99.0 bits (245), Expect = 9e-20
Identities = 55/113 (48%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 5 RKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFSF 64
R GRQKIE+++I +E QV FSK G FKKASEL LC ADVA VVFSP+GK +SF
Sbjct: 12 RPSLGRQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSF 71
Query: 65 GHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEK 117
GHP+++ ++DRFLS + T E + V ELN Q ++ +DA K
Sbjct: 72 GHPSVEFLLDRFLS---SSLPATAGKEEGSSVSVVAELNRQYGELRAMVDAHK 121
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 370,736,316
Number of Sequences: 2540612
Number of extensions: 14576841
Number of successful extensions: 43836
Number of sequences better than 10.0: 1730
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 42066
Number of HSP's gapped (non-prelim): 1761
length of query: 228
length of database: 863,360,394
effective HSP length: 124
effective length of query: 104
effective length of database: 548,324,506
effective search space: 57025748624
effective search space used: 57025748624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)
Medicago: description of AC144731.7