BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144727.12 - phase: 0
(160 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM20247.1| putative plasma membrane associated protein [Arab... 243 1e-63
ref|NP_917087.1| putative plasma membrane associated protein [Or... 213 1e-54
dbj|BAD81491.1| putative ABA induced plasma membrane protein PM ... 198 4e-50
gb|AAD38289.1| putative ABA induced plasma membrane protein [Ory... 187 8e-47
dbj|BAB10821.1| unnamed protein product [Arabidopsis thaliana] g... 167 1e-40
gb|AAM60995.1| plasma membrane associated protein-like [Arabidop... 139 3e-32
gb|AAT85140.1| unknown protein [Oryza sativa (japonica cultivar-... 136 2e-31
gb|AAK93757.1| unknown protein [Arabidopsis thaliana] gi|1350755... 122 4e-27
ref|XP_475170.1| putative plasma membrane associated protein [Or... 119 4e-26
gb|AAB38504.1| ABA induced plasma membrane protein PM 19 [Tritic... 118 5e-26
gb|AAF29532.1| plasma membrane associated protein [Hordeum vulgare] 117 8e-26
gb|AAC37469.1| a Lea protein with hydrophobic domain, high pI va... 117 1e-25
ref|XP_467623.1| putative ABA-induced plasma membrane protein [O... 113 2e-24
ref|XP_477728.1| putative plasma membrane associated protein [Or... 110 1e-23
gb|AAP54176.1| unknown protein [Oryza sativa (japonica cultivar-... 86 3e-16
emb|CAC83360.1| putative hydrophobic LEA-like protein [Pinus pin... 78 7e-14
ref|NP_523081.1| PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solan... 38 0.081
gb|AAV93705.1| membrane protein, putative [Silicibacter pomeroyi... 38 0.11
gb|AAF96525.1| transketolase 1 [Vibrio cholerae O1 biovar eltor ... 35 0.69
gb|AAF93646.1| transketolase 1 [Vibrio cholerae O1 biovar eltor ... 35 0.69
>gb|AAM20247.1| putative plasma membrane associated protein [Arabidopsis thaliana]
gi|18377741|gb|AAL67020.1| putative plasma membrane
associated protein [Arabidopsis thaliana]
gi|15218953|ref|NP_174245.1| AWPM-19-like membrane
family protein [Arabidopsis thaliana]
gi|12323516|gb|AAG51728.1| plasma membrane associated
protein, putative; 66162-66952 [Arabidopsis thaliana]
gi|25354594|pir||B86418 probable plasma membrane
associated protein F15D2.10 - Arabidopsis thaliana
Length = 158
Score = 243 bits (620), Expect = 1e-63
Identities = 117/154 (75%), Positives = 133/154 (85%)
Query: 1 MANEQMKPIATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMG 60
MA EQ+KP+A+ LL LNFCMYVIV+ IGGWAMNRAIDHGFE+GP +LPAHFSPIYFPMG
Sbjct: 1 MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60
Query: 61 NAATGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCK 120
NAATGFFV FAL+AGVVG S ISGL+HIRSWT SLP+AA+ A IAW LTVLAMGF K
Sbjct: 61 NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120
Query: 121 EIQLNIRNSRLKTMEAFLIILTATQLFYIAAIHG 154
EI+L RN++L+TMEAFLIIL+ TQL YIAA+HG
Sbjct: 121 EIELQGRNAKLRTMEAFLIILSVTQLIYIAAVHG 154
>ref|NP_917087.1| putative plasma membrane associated protein [Oryza sativa (japonica
cultivar-group)] gi|15408768|dbj|BAB64168.1| plasma
membrane associated protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 156
Score = 213 bits (542), Expect = 1e-54
Identities = 103/154 (66%), Positives = 125/154 (80%)
Query: 1 MANEQMKPIATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMG 60
MAN +KP+A LLL LNFCMYVIV ++GGWA+N AI G+ IG G LPA+FSPIYFPMG
Sbjct: 1 MANAGLKPVAGLLLVLNFCMYVIVAAVGGWAINHAIHTGYFIGSGMALPANFSPIYFPMG 60
Query: 61 NAATGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCK 120
NAATGFFV FA+IAGVVG + ++G +H+R+W+ ESLP+AAS IAW LT+LAMG K
Sbjct: 61 NAATGFFVIFAVIAGVVGAAAALAGFHHVRAWSHESLPAAASSGFIAWTLTLLAMGLAVK 120
Query: 121 EIQLNIRNSRLKTMEAFLIILTATQLFYIAAIHG 154
EI L+ RN+RLKTME+F IIL+ATQLFY+ AIHG
Sbjct: 121 EIDLHGRNARLKTMESFTIILSATQLFYLLAIHG 154
>dbj|BAD81491.1| putative ABA induced plasma membrane protein PM 19 [Oryza sativa
(japonica cultivar-group)]
Length = 171
Score = 198 bits (504), Expect = 4e-50
Identities = 95/153 (62%), Positives = 117/153 (76%)
Query: 4 EQMKPIATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAA 63
E +KP+A LLL LN CMYVI+ IGGWA+N +ID GF +GPG LPAHF P++FP+GN A
Sbjct: 3 ETLKPVALLLLILNLCMYVILAIIGGWAVNISIDRGFILGPGLRLPAHFHPMFFPIGNWA 62
Query: 64 TGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQ 123
TGFFV F+L+AGVVGI S + G +HIR W SL AA+ +AWALTVLAMG C+EI
Sbjct: 63 TGFFVVFSLLAGVVGIASGLVGFSHIRHWNYYSLQPAATTGLLAWALTVLAMGLACQEIS 122
Query: 124 LNIRNSRLKTMEAFLIILTATQLFYIAAIHGAA 156
L+ RN++L TMEAF I+LTATQLFY+ AIH +
Sbjct: 123 LDRRNAKLGTMEAFTIVLTATQLFYVLAIHSGS 155
>gb|AAD38289.1| putative ABA induced plasma membrane protein [Oryza sativa
(japonica cultivar-group)] gi|34904644|ref|NP_913669.1|
putative ABA-induced plasma membrane protein [Oryza
sativa (japonica cultivar-group)]
gi|13486855|dbj|BAB40086.1| putative ABA-induced plasma
membrane protein [Oryza sativa (japonica
cultivar-group)]
Length = 189
Score = 187 bits (475), Expect = 8e-47
Identities = 95/171 (55%), Positives = 117/171 (67%), Gaps = 18/171 (10%)
Query: 4 EQMKPIATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAA 63
E +KP+A LLL LN CMYVI+ IGGWA+N +ID GF +GPG LPAHF P++FP+GN A
Sbjct: 3 ETLKPVALLLLILNLCMYVILAIIGGWAVNISIDRGFILGPGLRLPAHFHPMFFPIGNWA 62
Query: 64 TGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQ 123
TGFFV F+L+AGVVGI S + G +HIR W SL AA+ +AWALTVLAMG C+EI
Sbjct: 63 TGFFVVFSLLAGVVGIASGLVGFSHIRHWNYYSLQPAATTGLLAWALTVLAMGLACQEIS 122
Query: 124 LNIRNSRL------------------KTMEAFLIILTATQLFYIAAIHGAA 156
L+ RN++L TMEAF I+LTATQLFY+ AIH +
Sbjct: 123 LDRRNAKLINSFRMVCELKPWEFGIQGTMEAFTIVLTATQLFYVLAIHSGS 173
>dbj|BAB10821.1| unnamed protein product [Arabidopsis thaliana]
gi|15237455|ref|NP_199465.1| AWPM-19-like membrane
family protein [Arabidopsis thaliana]
Length = 138
Score = 167 bits (422), Expect = 1e-40
Identities = 81/118 (68%), Positives = 99/118 (83%), Gaps = 6/118 (5%)
Query: 43 GPGFDLPAHFSPIYFPMGNAATGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAAS 102
G + LPAHFSPI+FPMGNAATGFF+ FALIAGV G S+ISG++H++SWT+ SLP+A S
Sbjct: 18 GADYSLPAHFSPIHFPMGNAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVS 77
Query: 103 VAAIAWALTVLAMGFGCKEIQLNIRNSRL------KTMEAFLIILTATQLFYIAAIHG 154
A IAW+LT+LAMGFGCKEI+L +RN+RL +TMEAFLIIL+ATQL YIAAI+G
Sbjct: 78 AATIAWSLTLLAMGFGCKEIELGMRNARLVSKPLMRTMEAFLIILSATQLLYIAAIYG 135
>gb|AAM60995.1| plasma membrane associated protein-like [Arabidopsis thaliana]
gi|15239619|ref|NP_197398.1| AWPM-19-like membrane
family protein [Arabidopsis thaliana]
Length = 171
Score = 139 bits (350), Expect = 3e-32
Identities = 70/153 (45%), Positives = 97/153 (62%)
Query: 1 MANEQMKPIATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMG 60
MA+ K A +LL LN +Y ++ I WA+N I+ E LPA PIYFP+G
Sbjct: 1 MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60
Query: 61 NAATGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCK 120
N ATGFFV F LIAGVVG+ + ++G+ ++ W S +L SAA+ + I+W+LT+LAMG CK
Sbjct: 61 NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120
Query: 121 EIQLNIRNSRLKTMEAFLIILTATQLFYIAAIH 153
EI + + L+T+E II++ATQL AIH
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIH 153
>gb|AAT85140.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 169
Score = 136 bits (343), Expect = 2e-31
Identities = 67/146 (45%), Positives = 90/146 (60%)
Query: 13 LLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGFFVTFAL 72
LL LN +YV+V I GWA+N +ID F G P PIYFP+GN ATGFFV FAL
Sbjct: 13 LLFLNLVLYVVVAVIAGWAINYSIDESFNSLQGVSPPVRLFPIYFPIGNLATGFFVIFAL 72
Query: 73 IAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQLNIRNSRLK 132
+AGVVG+ + ++GL+ + S+ SAA+ + + W LT+LAMG CKEI + R L+
Sbjct: 73 LAGVVGVSTSLTGLHDVSQGYPASMMSAAAASIVTWTLTLLAMGLACKEISIGWRPPSLR 132
Query: 133 TMEAFLIILTATQLFYIAAIHGAAAI 158
+E F IIL TQL ++H A +
Sbjct: 133 ALETFTIILAGTQLLCAGSLHAGAHV 158
>gb|AAK93757.1| unknown protein [Arabidopsis thaliana] gi|13507555|gb|AAK28640.1|
unknown protein [Arabidopsis thaliana]
gi|18390408|ref|NP_563710.1| AWPM-19-like membrane
family protein [Arabidopsis thaliana]
gi|2494121|gb|AAB80630.1| Strong similarity to Triticum
ABA induced membrane protein (gb|U80037). EST gb|Z27032
comes from this gene. [Arabidopsis thaliana]
gi|25354593|pir||B86178 hypothetical protein [imported]
- Arabidopsis thaliana
Length = 186
Score = 122 bits (305), Expect = 4e-27
Identities = 68/157 (43%), Positives = 94/157 (59%), Gaps = 14/157 (8%)
Query: 1 MANEQMKPIATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMG 60
MA + IA LL LN MY+IV+ W +N+ I+ G P F G
Sbjct: 1 MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYIN-GQTNHPSFG------------G 47
Query: 61 NAATGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCK 120
N AT FF+TF+++A VVG+ S ++G NHIR W ++SL +A + + +AWA+T LAMG CK
Sbjct: 48 NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 107
Query: 121 EIQL-NIRNSRLKTMEAFLIILTATQLFYIAAIHGAA 156
+I + R RLK +EAF+IILT TQL Y+ IH +
Sbjct: 108 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAGS 144
>ref|XP_475170.1| putative plasma membrane associated protein [Oryza sativa (japonica
cultivar-group)] gi|47777422|gb|AAT38056.1| putative
plasma membrane associated protein [Oryza sativa
(japonica cultivar-group)]
Length = 173
Score = 119 bits (297), Expect = 4e-26
Identities = 65/143 (45%), Positives = 87/143 (60%), Gaps = 14/143 (9%)
Query: 13 LLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGFFVTFAL 72
LL LN MY+IVI W +N I+ G PG GN AT +F+ FA+
Sbjct: 12 LLVLNLIMYLIVIGFASWNLNHYIN-GETNHPGV------------AGNGATFYFLVFAI 58
Query: 73 IAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQL-NIRNSRL 131
+AGVVG S ++G++H+RSW + SL + A+ A IAWA+T LA G CKEI + R RL
Sbjct: 59 LAGVVGAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGGYRGWRL 118
Query: 132 KTMEAFLIILTATQLFYIAAIHG 154
+ +EAF+IIL TQL Y+A +HG
Sbjct: 119 RVLEAFVIILAFTQLLYVAMLHG 141
>gb|AAB38504.1| ABA induced plasma membrane protein PM 19 [Triticum aestivum]
gi|7489659|pir||T06978 ABA-induced plasma membrane
protein PM 19 - wheat
Length = 182
Score = 118 bits (296), Expect = 5e-26
Identities = 62/142 (43%), Positives = 87/142 (60%), Gaps = 14/142 (9%)
Query: 13 LLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGFFVTFAL 72
LL LN MY++VI W +N I+ G PG GN AT +F+ FA+
Sbjct: 12 LLVLNLIMYIVVIGFASWNLNHFIN-GLTNRPGVG------------GNGATFYFLVFAI 58
Query: 73 IAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQL-NIRNSRL 131
+AGVVG S ++G++H+R+W +SL ++AS A +AWA+T LA G CKEI + R RL
Sbjct: 59 LAGVVGAASKLAGVHHVRTWRGDSLATSASSALVAWAITALAFGLACKEIHIGGYRGWRL 118
Query: 132 KTMEAFLIILTATQLFYIAAIH 153
+ +EAF+IIL TQL Y+ A+H
Sbjct: 119 RVLEAFVIILMFTQLLYVLALH 140
>gb|AAF29532.1| plasma membrane associated protein [Hordeum vulgare]
Length = 181
Score = 117 bits (294), Expect = 8e-26
Identities = 62/142 (43%), Positives = 87/142 (60%), Gaps = 14/142 (9%)
Query: 13 LLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGFFVTFAL 72
LL LN MY+IVI W +N I+ G PG GN AT +F+ FA+
Sbjct: 12 LLVLNLIMYIIVIGFASWNLNHFIN-GITNRPGVG------------GNGATFYFLVFAI 58
Query: 73 IAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQL-NIRNSRL 131
+AGVVG S ++G++H+R+W +SL ++AS + +AWA+T LA G CKEI + R RL
Sbjct: 59 LAGVVGAASKLAGVHHVRTWRGDSLATSASSSLVAWAITALAFGLACKEIHVGGYRGWRL 118
Query: 132 KTMEAFLIILTATQLFYIAAIH 153
+ +EAF+IIL TQL Y+ A+H
Sbjct: 119 RVLEAFVIILAFTQLLYVLALH 140
>gb|AAC37469.1| a Lea protein with hydrophobic domain, high pI value (11.6); 15kD
protein; putative gi|7488688|pir||T07661 maturation
protein PM3 - soybean
Length = 181
Score = 117 bits (293), Expect = 1e-25
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 14/146 (9%)
Query: 9 IATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGFFV 68
+A LL LN MY IV+ W +NR I+ G P F GN AT FF+
Sbjct: 8 VAAPLLFLNLIMYFIVLGFASWCLNRFIN-GQTYHPSFG------------GNGATMFFL 54
Query: 69 TFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQL-NIR 127
TF+++A V+GI S + G NH+R+W S+SL SA + + +AWA+T LA G CK+I L R
Sbjct: 55 TFSILAAVLGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHR 114
Query: 128 NSRLKTMEAFLIILTATQLFYIAAIH 153
RL+ +EAF+IILT TQL Y+ IH
Sbjct: 115 GWRLRVVEAFIIILTFTQLLYLILIH 140
>ref|XP_467623.1| putative ABA-induced plasma membrane protein [Oryza sativa
(japonica cultivar-group)] gi|46390474|dbj|BAD15935.1|
putative ABA-induced plasma membrane protein [Oryza
sativa (japonica cultivar-group)]
Length = 185
Score = 113 bits (282), Expect = 2e-24
Identities = 56/141 (39%), Positives = 84/141 (58%), Gaps = 14/141 (9%)
Query: 13 LLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGFFVTFAL 72
LL +N M+ V+ + GW++N+ ID G GN ++G+ + F+L
Sbjct: 14 LLCVNLVMHAAVLGLAGWSLNKFIDGETHHHLG--------------GNTSSGYLLVFSL 59
Query: 73 IAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQLNIRNSRLK 132
+AGVVG+ S++ L H+R+W E+L +AAS ++WALT L+ G CK I L R RL+
Sbjct: 60 MAGVVGVCSVLPRLLHVRAWRGETLAAAASTGLVSWALTALSFGLACKHITLGNRGRRLR 119
Query: 133 TMEAFLIILTATQLFYIAAIH 153
T+EAF+ ILT TQL Y+ +H
Sbjct: 120 TLEAFIAILTLTQLLYLILLH 140
>ref|XP_477728.1| putative plasma membrane associated protein [Oryza sativa (japonica
cultivar-group)] gi|4097340|gb|AAD10377.1| hydrophobic
LEA-like protein [Oryza sativa]
gi|34395385|dbj|BAC84545.1| putative plasma membrane
associated protein [Oryza sativa (japonica
cultivar-group)] gi|34394744|dbj|BAC84108.1| putative
plasma membrane associated protein [Oryza sativa
(japonica cultivar-group)]
Length = 173
Score = 110 bits (276), Expect = 1e-23
Identities = 61/142 (42%), Positives = 85/142 (58%), Gaps = 14/142 (9%)
Query: 13 LLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMGNAATGFFVTFAL 72
LL LN MY+IVI W +N I+ G PG GN AT +F+ FA+
Sbjct: 12 LLVLNLIMYLIVIGFASWNLNHFIN-GQTNYPGV------------AGNGATFYFLVFAI 58
Query: 73 IAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCKEIQL-NIRNSRL 131
+AGVVG S ++G++H+R+W +SL + A+ + IAWA+T LA G CKEI + R RL
Sbjct: 59 LAGVVGAASKLAGVHHVRAWRHDSLATNAASSLIAWAITALAFGLACKEIHIGGHRGWRL 118
Query: 132 KTMEAFLIILTATQLFYIAAIH 153
+ +EAF+IIL TQL Y+ +H
Sbjct: 119 RVLEAFVIILAFTQLLYVLMLH 140
>gb|AAP54176.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|37535174|ref|NP_921889.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|22758326|gb|AAN05530.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 184
Score = 86.3 bits (212), Expect = 3e-16
Identities = 57/166 (34%), Positives = 83/166 (49%), Gaps = 15/166 (9%)
Query: 9 IATLLLALNFCMYVIVISIGGWAMNRAIDH-GFEIGPGFDLPAHFSPIYFPMGNAATGFF 67
+A LL LN MYV ++ GWA+N +I + G ++G G+ +SP Y A+ F
Sbjct: 11 VAGSLLLLNLLMYVFLLGFAGWALNSSIKNAGADVGVGWG-EQPWSPYYRQSAWFASRFH 69
Query: 68 V-TFALIAGVVGIGSLISGLNHI----RSWTSESLPSAASVAAIAWALTVLAMGFGCKEI 122
+ TFA +AG +G+ + S H SW + L +AAS+ AWA T LA G C+EI
Sbjct: 70 LATFAALAGALGVAAKASAAYHGGRSGASWRPQGLAAAASLGTAAWAATALAFGVACREI 129
Query: 123 Q--------LNIRNSRLKTMEAFLIILTATQLFYIAAIHGAAAIRR 160
R R++ +E + L TQL Y+ +H A A R
Sbjct: 130 HDAAAAGPAGAARGWRMRALEGLTVTLAFTQLLYVLLLHAAVAGER 175
>emb|CAC83360.1| putative hydrophobic LEA-like protein [Pinus pinaster]
Length = 93
Score = 78.2 bits (191), Expect = 7e-14
Identities = 39/60 (65%), Positives = 46/60 (76%)
Query: 95 ESLPSAASVAAIAWALTVLAMGFGCKEIQLNIRNSRLKTMEAFLIILTATQLFYIAAIHG 154
ESL S+AS A AW LT+LAMG CKEI + RNS+L T+E+FLIIL+ TQLFYI IHG
Sbjct: 1 ESLASSASSAMTAWGLTLLAMGLACKEIHVGGRNSKLITLESFLIILSGTQLFYILVIHG 60
>ref|NP_523081.1| PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum GMI1000]
gi|17431996|emb|CAD18673.1| PROBABLE TRANSMEMBRANE
PROTEIN [Ralstonia solanacearum]
Length = 883
Score = 38.1 bits (87), Expect = 0.081
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 58 PMGNAATGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAW---ALTVLA 114
P G AT F+ +AL +G+GSL +G R +T+ L +A+ AA+A+ AL V
Sbjct: 117 PPGTVATTSFIAYAL-GNTIGLGSLTAGSVRARLYTAAGLDAASVTAAVAFDASALGVST 175
Query: 115 MGFG 118
FG
Sbjct: 176 TAFG 179
>gb|AAV93705.1| membrane protein, putative [Silicibacter pomeroyi DSS-3]
gi|56695302|ref|YP_165650.1| membrane protein, putative
[Silicibacter pomeroyi DSS-3]
Length = 354
Score = 37.7 bits (86), Expect = 0.11
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
Query: 39 GFEIGPGFDLPAHFSPIYFPMGNAATGFFVT-----FALIAGVVGIGSLISGLNHIRSWT 93
G EIGPG A +P + +G + L A V+ G +++ H+ WT
Sbjct: 167 GIEIGPGLPQLAAVTPWAWILGQIVAALLLAPVLKALKLPAHVLIAGIVVAATTHLAGWT 226
Query: 94 SESLPSAASVAAIAWALTVLAMGFGCKEIQLNIRNSRLKTMEAFLIILTATQLFYIAAIH 153
+ LP A+ A++ ++ FG + R R I++ T L +AA+
Sbjct: 227 AGGLPGWAAQASLILMGAMIGSRFG----GMGWRELRQSLTAGLAIVVLTTGLATLAALP 282
Query: 154 GA 155
A
Sbjct: 283 AA 284
>gb|AAF96525.1| transketolase 1 [Vibrio cholerae O1 biovar eltor str. N16961]
gi|15601382|ref|NP_233013.1| transketolase 1 [Vibrio
cholerae O1 biovar eltor str. N16961]
gi|11257185|pir||C82437 transketolase 1 VCA0624
[imported] - Vibrio cholerae (strain N16961 serogroup
O1)
Length = 680
Score = 35.0 bits (79), Expect = 0.69
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 44 PGFDLPAHFSPIYFPMGNAATGFFVTFALIAGVVGIGSLI-----SGLN---HIRSWTSE 95
PG D+ HF+ ++ G G +AG +G+G LI +G++ H+ W S+
Sbjct: 155 PGHDIVDHFTYVFMGDGCLMEGISHEACSLAGTLGLGKLIAFWDDNGISIDGHVEGWFSD 214
Query: 96 SLPSAASVAAIAWALTVLAMGFGCKEIQLNIRNSRLKTMEAFLI 139
P A W + G I I ++ +T LI
Sbjct: 215 DTPK--RFEAYGWHVIPAVDGHDADAINAAIEAAKAETSRPTLI 256
>gb|AAF93646.1| transketolase 1 [Vibrio cholerae O1 biovar eltor str. N16961]
gi|15640500|ref|NP_230127.1| transketolase 1 [Vibrio
cholerae O1 biovar eltor str. N16961]
gi|11257183|pir||F82319 transketolase 1 VC0473
[imported] - Vibrio cholerae (strain N16961 serogroup
O1)
Length = 694
Score = 35.0 bits (79), Expect = 0.69
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 44 PGFDLPAHFSPIYFPMGNAATGFFVTFALIAGVVGIGSLI-----SGLN---HIRSWTSE 95
PG D+ HF+ ++ G G +AG +G+G LI +G++ H+ W S+
Sbjct: 169 PGHDIVDHFTYVFMGDGCLMEGISHEACSLAGTLGLGKLIAFWDDNGISIDGHVEGWFSD 228
Query: 96 SLPSAASVAAIAWALTVLAMGFGCKEIQLNIRNSRLKTMEAFLI 139
P A W + G I I ++ +T LI
Sbjct: 229 DTPK--RFEAYGWHVIPAVDGHDADAINAAIEAAKAETSRPTLI 270
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.328 0.140 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 249,552,985
Number of Sequences: 2540612
Number of extensions: 9722594
Number of successful extensions: 35688
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 35642
Number of HSP's gapped (non-prelim): 69
length of query: 160
length of database: 863,360,394
effective HSP length: 117
effective length of query: 43
effective length of database: 566,108,790
effective search space: 24342677970
effective search space used: 24342677970
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 69 (31.2 bits)
Medicago: description of AC144727.12