BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144726.1 + phase: 0
(240 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC35027.1| MADS-box transcription factor [Pisum sativum] gi... 474 e-133
gb|AAX13296.1| MADS box protein AP1a [Lotus corniculatus var. ja... 441 e-123
gb|AAX13297.1| MADS box protein AP1b [Lotus corniculatus var. ja... 373 e-102
emb|CAA67967.1| MADS3 protein [Betula pendula] 372 e-102
gb|AAT07447.1| AP1-like protein [Vitis vinifera] 369 e-101
emb|CAA04321.1| MADS-box protein [Malus x domestica] 360 2e-98
gb|AAD20329.1| MADS C-2 protein; MADS-box protein [Sinapis alba] 358 9e-98
gb|AAL61543.1| AP1-like protein [Malus x domestica] 357 1e-97
emb|CAA78909.1| AP1 [Arabidopsis thaliana] 356 4e-97
pir||S20886 MADS box protein squa - garden snapdragon gi|16052|e... 355 5e-97
emb|CAA57233.1| Saap1 [Sinapis alba] gi|1076477|pir||S52236 MADS... 354 1e-96
gb|AAO50484.1| putative floral homeotic protein APETALA1 [Arabid... 354 1e-96
gb|AAM65504.1| homeotic protein boi1AP1, putative [Arabidopsis t... 354 1e-96
gb|AAT39554.1| APETALA1-like MADS-box PTAP1-1 [Populus balsamife... 353 2e-96
dbj|BAD43696.1| unknown protein [Arabidopsis thaliana] 353 2e-96
gb|AAX14152.1| apetala1 [Eriobotrya japonica] gi|60116224|gb|AAX... 353 3e-96
emb|CAD47854.1| MADS-box protein AP1-c [Brassica oleracea var. b... 352 7e-96
gb|AAM28462.1| apetala 1 [Arabidopsis lyrata] gi|6707086|gb|AAF2... 350 1e-95
emb|CAD47853.1| MADS-box protein AP1-a [Brassica oleracea var. b... 350 2e-95
gb|AAF12700.2| PTM2 [Populus tremuloides] 350 3e-95
>emb|CAC35027.1| MADS-box transcription factor [Pisum sativum]
gi|13661024|emb|CAC37031.1| MADS-box transcription
factor [Pisum sativum] gi|18252655|gb|AAL66379.1|
MADS-box transcription factor MADS4 [Pisum sativum]
Length = 240
Score = 474 bits (1220), Expect = e-133
Identities = 234/240 (97%), Positives = 238/240 (98%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLG+M
Sbjct: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGTM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
SLKELQSLEQQLDTALKLIRTRRNQ+MYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA
Sbjct: 121 SLKELQSLEQQLDTALKLIRTRRNQLMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
Query: 181 QQQAQWEHPNHHGVNPNYLLQQQLPTLNMGGNYREEAPEMGRNELDLTLEPLYTCHLGCF 240
+QQ QWEHPNHHGVNPNYLL QQLP+LNMGGNYREEAPEMGRNELDLTLEPLYTCHLGCF
Sbjct: 181 EQQVQWEHPNHHGVNPNYLLHQQLPSLNMGGNYREEAPEMGRNELDLTLEPLYTCHLGCF 240
>gb|AAX13296.1| MADS box protein AP1a [Lotus corniculatus var. japonicus]
Length = 241
Score = 441 bits (1135), Expect = e-123
Identities = 225/242 (92%), Positives = 235/242 (96%), Gaps = 3/242 (1%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERY+YAERQLVANDSESQGNWTIEYTRLKAKIDLLQRN+RHYMGEDLGSM
Sbjct: 61 SCMEKILERYERYAYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNHRHYMGEDLGSM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
SLKELQSLEQQLDTALK IRTRRNQ+MYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA
Sbjct: 121 SLKELQSLEQQLDTALKHIRTRRNQLMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
Query: 181 QQQ-AQWEHPNHHGVNPNYLLQQQLPTLNMGGNYREE-APEMGRNELDLTLEPLYTCHLG 238
QQQ AQW+HPN HGVN +L+QQ LPTLNMGGNYRE+ AP++GRNELDLTLEPLY+CHLG
Sbjct: 181 QQQHAQWDHPN-HGVNAPFLMQQPLPTLNMGGNYREDHAPDVGRNELDLTLEPLYSCHLG 239
Query: 239 CF 240
CF
Sbjct: 240 CF 241
>gb|AAX13297.1| MADS box protein AP1b [Lotus corniculatus var. japonicus]
Length = 246
Score = 373 bits (958), Expect = e-102
Identities = 197/247 (79%), Positives = 220/247 (88%), Gaps = 8/247 (3%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRV+LKRIEN INRQVTFSKRR GLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD
Sbjct: 1 MGRGRVELKRIENVINRQVTFSKRRGGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
Query: 61 SCMEKILERYERYSYAERQLVAN--DSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLG 118
SCMEKILER+ERY+YAERQL N +S+ Q NWTIEYTRLK+KIDLLQRN+RHY+GEDL
Sbjct: 61 SCMEKILERHERYNYAERQLAGNADNSDEQVNWTIEYTRLKSKIDLLQRNHRHYVGEDLD 120
Query: 119 SMSLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKI--KEKE 176
+MSLKELQ LEQQLDTALK IRTRRNQVMY+SIS+LQKKEKVI+EQNNMLAKKI KEKE
Sbjct: 121 TMSLKELQCLEQQLDTALKNIRTRRNQVMYDSISDLQKKEKVIKEQNNMLAKKIKEKEKE 180
Query: 177 KIAAQQQAQWEHPNHHGVNPNYLLQQQ-LPTLNMGGNY-REEAPEMGRNELDLTLEPLYT 234
K AQ+ Q E PN+ V+ ++LL Q+ LPTLNMGGNY ++EAPE+GRN+LDLTLEP Y+
Sbjct: 181 KAVAQEAPQLEQPNYR-VDTSFLLHQEPLPTLNMGGNYHQQEAPELGRNDLDLTLEPFYS 239
Query: 235 C-HLGCF 240
C HLGCF
Sbjct: 240 CHHLGCF 246
>emb|CAA67967.1| MADS3 protein [Betula pendula]
Length = 243
Score = 372 bits (954), Expect = e-102
Identities = 187/242 (77%), Positives = 211/242 (86%), Gaps = 3/242 (1%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDAEVA+IVFSHKGKLFEYATD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRGGLLKKAHEISVLCDAEVAVIVFSHKGKLFEYATD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
S MEKILERYERYSYAE QLVA DSE QG+WT+E+ RLK K++LLQRN+RHY+G+DL S+
Sbjct: 61 SSMEKILERYERYSYAEAQLVAADSEGQGSWTMEFARLKGKVELLQRNHRHYLGDDLESL 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK +RTR+NQ+MYESIS+LQKKEK IQEQN +LAKKIKEKEK A
Sbjct: 121 SHKELQNLEQQLDTALKHVRTRKNQLMYESISQLQKKEKAIQEQNTILAKKIKEKEKTVA 180
Query: 181 QQQAQWEHPNHHGVN--PNYLLQQQLPTLNMGGNYREEAPEMGRNELDLTLEPLYTCHLG 238
Q WE N N ++LL Q LP LN+GGNY+EEAPE+ RNEL+LTLEP+Y+CHLG
Sbjct: 181 -QHVDWEQQNQGAPNGSSSFLLPQPLPCLNIGGNYQEEAPEVRRNELELTLEPIYSCHLG 239
Query: 239 CF 240
CF
Sbjct: 240 CF 241
>gb|AAT07447.1| AP1-like protein [Vitis vinifera]
Length = 241
Score = 369 bits (948), Expect = e-101
Identities = 187/240 (77%), Positives = 209/240 (86%), Gaps = 1/240 (0%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDAEVALIVFS KGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKIL+RYERYSYAERQL A D ESQGNW++EY++LKAKI+LLQR+ RH++GEDL S+
Sbjct: 61 SCMEKILDRYERYSYAERQLTATDPESQGNWSLEYSKLKAKIELLQRSQRHFLGEDLDSL 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
SLKELQ+LEQQLDTALK IR+R+NQ+MYESISELQ+KEK +QEQNNMLAK+IKEKEK A
Sbjct: 121 SLKELQNLEQQLDTALKHIRSRKNQLMYESISELQRKEKAMQEQNNMLAKEIKEKEKTVA 180
Query: 181 QQQAQWEHPNHHGVNPNYLLQQQLPTLNMGGNYREEAPEMGRNELDLTLEPLYTCHLGCF 240
QQ WE NH ++LL QQLP LNMGG Y+ EA RNELDLTLEP+Y HLGCF
Sbjct: 181 -QQTHWEQQNHGLNTSSFLLPQQLPCLNMGGTYQGEAHGARRNELDLTLEPIYPSHLGCF 239
>emb|CAA04321.1| MADS-box protein [Malus x domestica]
Length = 239
Score = 360 bits (923), Expect = 2e-98
Identities = 185/241 (76%), Positives = 209/241 (85%), Gaps = 5/241 (2%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDA+VALIVFS+KGKLFEYATD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAQVALIVFSNKGKLFEYATD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCME+ILERYERYSYAERQLV D ESQGNWT EY+RLKAK ++LQRN+RHY+GEDL S+
Sbjct: 61 SCMEQILERYERYSYAERQLVEPDFESQGNWTFEYSRLKAKAEVLQRNHRHYLGEDLDSL 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
+LKE+Q+LEQQLDTALK IR R+NQ+M ESISELQ+K K IQE+NN+LAKKIKEKEK AA
Sbjct: 121 TLKEIQNLEQQLDTALKQIRLRKNQLMNESISELQRKRKAIQEENNLLAKKIKEKEKAAA 180
Query: 181 QQQAQ-WEHPNHHGVNPNYLLQQQLPTLNMGGNYREEAPEMGRNELDLTLEPLYTCHLGC 239
Q Q Q WE N HG++ LL Q LP LN GG ++E ++ RN+LDLTLEPLY CHLGC
Sbjct: 181 QPQVQNWEQQN-HGLD---LLPQPLPCLNNGGTQQDEFLQVRRNQLDLTLEPLYECHLGC 236
Query: 240 F 240
F
Sbjct: 237 F 237
>gb|AAD20329.1| MADS C-2 protein; MADS-box protein [Sinapis alba]
Length = 254
Score = 358 bits (918), Expect = 9e-98
Identities = 180/252 (71%), Positives = 213/252 (84%), Gaps = 12/252 (4%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGL+KKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+S NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK IR+R+NQ+MY+SI+ELQ+KEK IQEQN+ML+K+IKE+EK+
Sbjct: 121 SPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQIKEREKVLR 180
Query: 181 QQQAQWEHPNH-HGVNPNYLLQQQL-----------PTLNMGGNYREEAPEMGRNELDLT 228
QQ QW+ NH H + P LQQQ+ P LNMGG Y+E+ M RN+LDL+
Sbjct: 181 AQQEQWDEQNHGHNMPPPPPLQQQIQHPYMLSHQPSPFLNMGGLYQEDQIAMRRNDLDLS 240
Query: 229 LEPLYTCHLGCF 240
LEP+Y C+LGCF
Sbjct: 241 LEPVYNCNLGCF 252
>gb|AAL61543.1| AP1-like protein [Malus x domestica]
Length = 239
Score = 357 bits (917), Expect = 1e-97
Identities = 182/241 (75%), Positives = 207/241 (85%), Gaps = 5/241 (2%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKR GLLKKAHEISVLCDA+VALIVFS+KGKL EYATD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRSTGLLKKAHEISVLCDAQVALIVFSNKGKLLEYATD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCME+ILERYERYSYAERQLV D ESQGNWT EY+RLKAK+++LQRN+RHY+GEDL S+
Sbjct: 61 SCMEQILERYERYSYAERQLVEPDFESQGNWTFEYSRLKAKVEVLQRNHRHYLGEDLDSL 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
+LKE+QSLEQQLDTA K IR R+NQ+M+ESI+ELQ+KEK IQEQNN+LAKKIKEKEK AA
Sbjct: 121 TLKEIQSLEQQLDTAHKQIRLRKNQLMHESITELQRKEKAIQEQNNLLAKKIKEKEKAAA 180
Query: 181 QQQAQ-WEHPNHHGVNPNYLLQQQLPTLNMGGNYREEAPEMGRNELDLTLEPLYTCHLGC 239
Q Q Q WE NH LL Q LP LN+GG ++E ++ RN+LDLTLEP Y+CHLGC
Sbjct: 181 QPQVQNWEQQNH----DLDLLPQPLPCLNIGGTQQDEFLQVRRNQLDLTLEPFYSCHLGC 236
Query: 240 F 240
F
Sbjct: 237 F 237
>emb|CAA78909.1| AP1 [Arabidopsis thaliana]
Length = 255
Score = 356 bits (913), Expect = 4e-97
Identities = 181/253 (71%), Positives = 209/253 (82%), Gaps = 13/253 (5%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+ NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK IRTR+NQ+MYESI+ELQKKEK IQEQN+ML+K+IKE+EKI
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180
Query: 181 QQQAQWEH------------PNHHGVNPNYLLQQQ-LPTLNMGGNYREEAPEMGRNELDL 227
QQ QW+ P H + Y+L Q P LNMGG Y+E+ P RN+L+L
Sbjct: 181 AQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAMRNDLEL 240
Query: 228 TLEPLYTCHLGCF 240
TLEP+Y C+LGCF
Sbjct: 241 TLEPVYNCNLGCF 253
>pir||S20886 MADS box protein squa - garden snapdragon gi|16052|emb|CAA45228.1|
SQUA [Antirrhinum majus]
Length = 248
Score = 355 bits (912), Expect = 5e-97
Identities = 181/247 (73%), Positives = 208/247 (83%), Gaps = 8/247 (3%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRG+VQLKRIENKINRQVTFSKRR GLLKKAHE+SVLCDAEVALIVFS+KGKLFEY+TD
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRGGLLKKAHELSVLCDAEVALIVFSNKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCM++ILE+YERYS+AERQLV+N+ +S NWT+EY++LKA+I+LLQRN+RHYMGEDL SM
Sbjct: 61 SCMDRILEKYERYSFAERQLVSNEPQSPANWTLEYSKLKARIELLQRNHRHYMGEDLDSM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
SLKE+QSLEQQLDTALK IRTR+NQ++Y+SISELQ KEK IQEQN MLAKKIKEKEK A
Sbjct: 121 SLKEIQSLEQQLDTALKNIRTRKNQLLYDSISELQHKEKAIQEQNTMLAKKIKEKEKEIA 180
Query: 181 QQQAQWEHPNHH------GVNPNYLLQQQLPTLNMGGNYR-EEAPEMGRNELDLTLEPLY 233
QQ QWEH HH P Y + Q P +N+G Y E A E RNELDLTL+ LY
Sbjct: 181 -QQPQWEHHRHHTNASIMPPPPQYSMAPQFPCINVGNTYEGEGANEDRRNELDLTLDSLY 239
Query: 234 TCHLGCF 240
+CHLGCF
Sbjct: 240 SCHLGCF 246
>emb|CAA57233.1| Saap1 [Sinapis alba] gi|1076477|pir||S52236 MADS box protein ap1 -
white mustard gi|3913047|sp|Q41276|AP1_SINAL Floral
homeotic protein APETALA1 (MADS C)
Length = 254
Score = 354 bits (909), Expect = 1e-96
Identities = 181/252 (71%), Positives = 212/252 (83%), Gaps = 12/252 (4%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+ NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK IR+R+NQ+M++SI+ELQ+KEK IQEQN+ML+K+IKE+EKI
Sbjct: 121 SSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILR 180
Query: 181 QQQAQWEHPNH-HGV----------NPNYLLQQQLPTLNMGGNYREEAP-EMGRNELDLT 228
QQ QW+ NH H + +P L Q P LNMGG Y+EE P EM RN+LDL+
Sbjct: 181 AQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMGGLYQEEDPMEMRRNDLDLS 240
Query: 229 LEPLYTCHLGCF 240
LEP+Y C+LGCF
Sbjct: 241 LEPVYNCNLGCF 252
>gb|AAO50484.1| putative floral homeotic protein APETALA1 [Arabidopsis thaliana]
gi|28393428|gb|AAO42136.1| putative floral homeotic
protein APETALA1 [Arabidopsis thaliana]
gi|15222220|ref|NP_177074.1| floral homeotic protein
APETALA1 (AP1) / agamous-like MADS box protein (AGL7)
[Arabidopsis thaliana] gi|21542380|sp|P35631|AP1_ARATH
Floral homeotic protein APETALA1 (Agamous-like MADS box
protein AGL7) gi|6730649|gb|AAF27070.1| F4N2.9
[Arabidopsis thaliana] gi|383297|prf||1902329A APETALA1
gene
Length = 256
Score = 354 bits (909), Expect = 1e-96
Identities = 182/254 (71%), Positives = 210/254 (82%), Gaps = 14/254 (5%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+ NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK IRTR+NQ+MYESI+ELQKKEK IQEQN+ML+K+IKE+EKI
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180
Query: 181 QQQAQWEH------------PNHHGVNPNYLLQQQ-LPTLNMGGNYREEAP-EMGRNELD 226
QQ QW+ P H + Y+L Q P LNMGG Y+E+ P M RN+L+
Sbjct: 181 AQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAMRRNDLE 240
Query: 227 LTLEPLYTCHLGCF 240
LTLEP+Y C+LGCF
Sbjct: 241 LTLEPVYNCNLGCF 254
>gb|AAM65504.1| homeotic protein boi1AP1, putative [Arabidopsis thaliana]
Length = 256
Score = 354 bits (909), Expect = 1e-96
Identities = 182/254 (71%), Positives = 210/254 (82%), Gaps = 14/254 (5%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+ NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK IRTR+NQ+MYESI+ELQKKEK IQEQN+ML+K+IKE+EKI
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180
Query: 181 QQQAQWEH------------PNHHGVNPNYLLQQQ-LPTLNMGGNYREEAP-EMGRNELD 226
QQ QW+ P H + Y+L Q P LNMGG Y+E+ P M RN+L+
Sbjct: 181 AQQEQWDQHNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAMRRNDLE 240
Query: 227 LTLEPLYTCHLGCF 240
LTLEP+Y C+LGCF
Sbjct: 241 LTLEPVYNCNLGCF 254
>gb|AAT39554.1| APETALA1-like MADS-box PTAP1-1 [Populus balsamifera subsp.
trichocarpa]
Length = 241
Score = 353 bits (907), Expect = 2e-96
Identities = 183/242 (75%), Positives = 210/242 (86%), Gaps = 5/242 (2%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDAEVALIVFSHKGKLFEY+T+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTN 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
+CMEKILER+ERYSYAERQLVA D +SQGNWT+EY RLKAK++LLQRN+RHY+GEDL S+
Sbjct: 61 ACMEKILERHERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRHYLGEDLDSV 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
SLKELQ+LEQQ+DTALKLIR R+N +MY+SISELQ KEK I+EQNNML K+IKEKEK A
Sbjct: 121 SLKELQNLEQQIDTALKLIRERKNHLMYQSISELQIKEKAIKEQNNMLVKQIKEKEK-AL 179
Query: 181 QQQAQWEHPNHHGVNPNYLL-QQQLPTLNMGGNYREEAPEMGRN-ELDLTLEPLYTCHLG 238
Q A W+ +H ++LL Q LP LN+ +Y+EE PE RN ELDLTLEP+Y+CHLG
Sbjct: 180 AQPALWDQQDHGPNASSFLLPQPPLPCLNI--SYQEEDPEARRNYELDLTLEPIYSCHLG 237
Query: 239 CF 240
CF
Sbjct: 238 CF 239
>dbj|BAD43696.1| unknown protein [Arabidopsis thaliana]
Length = 256
Score = 353 bits (906), Expect = 2e-96
Identities = 181/254 (71%), Positives = 210/254 (82%), Gaps = 14/254 (5%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+ NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK +RTR+NQ+MYESI+ELQKKEK IQEQN+ML+K+IKE+EKI
Sbjct: 121 SPKELQNLEQQLDTALKHMRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180
Query: 181 QQQAQWEH------------PNHHGVNPNYLLQQQ-LPTLNMGGNYREEAP-EMGRNELD 226
QQ QW+ P H + Y+L Q P LNMGG Y+E+ P M RN+L+
Sbjct: 181 AQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAMRRNDLE 240
Query: 227 LTLEPLYTCHLGCF 240
LTLEP+Y C+LGCF
Sbjct: 241 LTLEPVYNCNLGCF 254
>gb|AAX14152.1| apetala1 [Eriobotrya japonica] gi|60116224|gb|AAX14151.1| apetala1
[Eriobotrya japonica]
Length = 239
Score = 353 bits (905), Expect = 3e-96
Identities = 180/241 (74%), Positives = 209/241 (86%), Gaps = 5/241 (2%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MG GRVQLKRIENKINRQVTFSKRR GLLKKAHEISVLCDA+VA++VFS+KGKLFEYATD
Sbjct: 1 MGGGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAQVAVVVFSNKGKLFEYATD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCME+ILERYERYSYAERQLV + ESQGNWT EY RLKAK+++LQRN+RHY+GEDL S+
Sbjct: 61 SCMEQILERYERYSYAERQLVEPEFESQGNWTFEYCRLKAKVEVLQRNHRHYLGEDLDSL 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
+LKE+Q+LEQQLDTALK IR R+NQ+M+ESISELQ+K K IQE+NN+LAKKIKEKEK AA
Sbjct: 121 TLKEIQNLEQQLDTALKQIRLRKNQLMHESISELQRKRKAIQEENNLLAKKIKEKEKAAA 180
Query: 181 QQQAQ-WEHPNHHGVNPNYLLQQQLPTLNMGGNYREEAPEMGRNELDLTLEPLYTCHLGC 239
Q Q Q WE N G++ LL Q LP LN GG ++E ++ RN+LDLTLEPLY+CHLGC
Sbjct: 181 QPQVQDWEQQN-IGLD---LLPQPLPCLNNGGTQQDEFLQVRRNQLDLTLEPLYSCHLGC 236
Query: 240 F 240
F
Sbjct: 237 F 237
>emb|CAD47854.1| MADS-box protein AP1-c [Brassica oleracea var. botrytis]
gi|1561778|gb|AAB08875.1| homeotic protein boi1AP1
[Brassica oleracea]
Length = 256
Score = 352 bits (902), Expect = 7e-96
Identities = 178/254 (70%), Positives = 210/254 (82%), Gaps = 14/254 (5%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGL KKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+ NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK IR+R+NQ+MY+S++ELQ+KEK IQEQN+ML+K+IKE+EK+
Sbjct: 121 SPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREKVLM 180
Query: 181 QQQAQWEHPNH------------HGVNPNYLLQQQ-LPTLNMGGNYREEAP-EMGRNELD 226
QQ QW+ NH H + Y+L Q P LNMGG Y+EE P M RN+LD
Sbjct: 181 AQQEQWDQQNHGQNMPSPPPPQQHQIQHPYMLSHQPSPFLNMGGLYQEEDPMAMRRNDLD 240
Query: 227 LTLEPLYTCHLGCF 240
L+LEP+Y C+LGCF
Sbjct: 241 LSLEPVYNCNLGCF 254
>gb|AAM28462.1| apetala 1 [Arabidopsis lyrata] gi|6707086|gb|AAF25589.1| apetala1
[Arabidopsis lyrata]
Length = 251
Score = 350 bits (899), Expect = 1e-95
Identities = 181/251 (72%), Positives = 208/251 (82%), Gaps = 14/251 (5%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+ NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLNAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK IRTR+NQ+MYESI+ELQ+KEK IQEQN+ML+K+IKE+EKI
Sbjct: 121 SPKELQNLEQQLDTALKNIRTRKNQLMYESINELQRKEKAIQEQNSMLSKQIKEREKILR 180
Query: 181 QQQAQWEHPNH------------HGVNPNYLLQQQ-LPTLNMGGNYREEAP-EMGRNELD 226
QQ QW+ NH H + Y+L Q P LNMGG Y+EE P M RNEL+
Sbjct: 181 AQQEQWDQQNHGHNMPPPPPPQQHQIQHPYMLSHQPSPFLNMGGLYQEEDPMAMRRNELE 240
Query: 227 LTLEPLYTCHL 237
LTLEP+Y C+L
Sbjct: 241 LTLEPVYNCNL 251
>emb|CAD47853.1| MADS-box protein AP1-a [Brassica oleracea var. botrytis]
gi|1561780|gb|AAB08876.1| homeotic protein boi2AP1
[Brassica oleracea]
Length = 256
Score = 350 bits (898), Expect = 2e-95
Identities = 178/254 (70%), Positives = 210/254 (82%), Gaps = 14/254 (5%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGL+KKAHEISVLCDAEVAL+VFSHKGKLFEY+TD
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
SCMEKILERYERYSYAERQL+A +S+S NW++EY RLKAKI+LL+RN RHY+GEDL +M
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
S KELQ+LEQQLDTALK IR+R+NQ+MY+SI+ELQ+KEK IQEQN+ML+K+IKE+E +
Sbjct: 121 SPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQIKERENVLR 180
Query: 181 QQQAQWEHPNH------------HGVNPNYLLQQQ-LPTLNMGGNYREE-APEMGRNELD 226
QQ QW+ NH H + Y+L Q P LNMGG Y+EE M RN+LD
Sbjct: 181 AQQEQWDEQNHGHNMPPPPPPQQHQIQHPYMLSHQPSPFLNMGGLYQEEDQMAMRRNDLD 240
Query: 227 LTLEPLYTCHLGCF 240
L+LEP+Y C+LGCF
Sbjct: 241 LSLEPVYNCNLGCF 254
>gb|AAF12700.2| PTM2 [Populus tremuloides]
Length = 240
Score = 350 bits (897), Expect = 3e-95
Identities = 179/241 (74%), Positives = 208/241 (86%), Gaps = 4/241 (1%)
Query: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD 60
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVF HKGKLFEY+T+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFCHKGKLFEYSTN 60
Query: 61 SCMEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSM 120
+CMEKILER+ERYSYAERQLVA D +SQGNWT+EY RLK K++LLQRN+RHY+GEDL S+
Sbjct: 61 ACMEKILERHERYSYAERQLVATDLDSQGNWTLEYNRLKEKVELLQRNHRHYLGEDLDSV 120
Query: 121 SLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQNNMLAKKIKEKEKIAA 180
SLKELQ+LE+Q+DTAL+LIR R+N +MY+SISELQ KEK I+EQNNML K+IKEKEK A
Sbjct: 121 SLKELQNLEKQIDTALELIRERKNHLMYQSISELQIKEKAIKEQNNMLVKQIKEKEK-AL 179
Query: 181 QQQAQWEHPNHHGVNPNYLL-QQQLPTLNMGGNYREEAPEMGRNELDLTLEPLYTCHLGC 239
Q A W+ +H ++LL Q LP LN+ +Y+EE P RNELDLTLEP+Y+CHLGC
Sbjct: 180 AQPALWDQQDHGPNASSFLLPQPPLPCLNI--SYQEEDPIARRNELDLTLEPIYSCHLGC 237
Query: 240 F 240
F
Sbjct: 238 F 238
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.132 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 378,529,093
Number of Sequences: 2540612
Number of extensions: 14870244
Number of successful extensions: 82018
Number of sequences better than 10.0: 2635
Number of HSP's better than 10.0 without gapping: 1939
Number of HSP's successfully gapped in prelim test: 700
Number of HSP's that attempted gapping in prelim test: 77323
Number of HSP's gapped (non-prelim): 3614
length of query: 240
length of database: 863,360,394
effective HSP length: 124
effective length of query: 116
effective length of database: 548,324,506
effective search space: 63605642696
effective search space used: 63605642696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)
Medicago: description of AC144726.1