BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144721.14 - phase: 0
(234 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO49653.1| zinc finger-like protein [Phaseolus vulgaris] 155 9e-37
emb|CAB78352.1| putative protein [Arabidopsis thaliana] gi|51239... 127 3e-28
gb|AAU05520.1| At3g25030 [Arabidopsis thaliana] gi|9293985|dbj|B... 125 1e-27
ref|NP_914847.1| P0413C03.23 [Oryza sativa (japonica cultivar-gr... 124 2e-27
ref|NP_849372.2| zinc finger (C3HC4-type RING finger) family pro... 117 3e-25
gb|AAF20234.1| putative RING zinc finger protein [Arabidopsis th... 116 6e-25
gb|AAV63915.1| hypothetical protein At4g03965 [Arabidopsis thali... 100 4e-20
emb|CAB79180.1| hypothetical protein [Arabidopsis thaliana] gi|2... 99 7e-20
dbj|BAC42910.1| unknown protein [Arabidopsis thaliana] gi|289733... 99 7e-20
ref|XP_483438.1| zinc finger protein family-like [Oryza sativa (... 96 1e-18
emb|CAB80819.1| putative protein [Arabidopsis thaliana] gi|74874... 94 2e-18
gb|AAF70837.1| F2401.10 [Arabidopsis thaliana] gi|15220769|ref|N... 94 4e-18
gb|EAA18507.1| processed variable antigen-related [Plasmodium yo... 55 1e-06
ref|XP_665952.1| hypothetical protein Chro.80501 [Cryptosporidiu... 54 3e-06
ref|YP_024644.1| ORF106 [Ostreid herpesvirus 1] gi|41352484|gb|A... 52 1e-05
ref|XP_636266.1| hypothetical protein DDB0188369 [Dictyostelium ... 51 2e-05
ref|XP_638708.1| hypothetical protein DDB0220640 [Dictyostelium ... 51 3e-05
ref|XP_419487.1| PREDICTED: similar to Ubiquitin ligase protein ... 50 4e-05
gb|EAK89575.1| conserved protein [Cryptosporidium parvum] gi|663... 50 7e-05
ref|XP_419932.1| PREDICTED: similar to myelin transcription fact... 50 7e-05
>gb|AAO49653.1| zinc finger-like protein [Phaseolus vulgaris]
Length = 213
Score = 155 bits (392), Expect = 9e-37
Identities = 104/241 (43%), Positives = 128/241 (52%), Gaps = 70/241 (29%)
Query: 36 QKNTNQTLLDIIRENEPNNVVVNVSVTNSSSSSNNNVVKDRKSWKAFKELLLFKRRT--- 92
+ + ++TL DIIRE +PN KDR SWKAFKE L KR
Sbjct: 1 EASRSRTLQDIIREEKPNGDA-----------------KDRNSWKAFKEKLRLKRAVGLA 43
Query: 93 -SDESTHQQ---------------------QQNEDI---PTNSDPSEFL--------PGG 119
S ++H QQN+ + +SDP E GG
Sbjct: 44 WSSATSHSNNNDNDDGNLPQTRLHSDGAATQQNDVVVEDANDSDPIERFGSPAENTAAGG 103
Query: 120 EFSD----ETAQVSMSLMDLLEESEIELE--RISDVVDEGDDVEENNEKREEEEEREEEG 173
+ S+ + A V +SLMDLLEE+E EL+ R+SD DD + EKREE+EE +E
Sbjct: 104 DSSEGENNQEAAVGVSLMDLLEEAEQELDLYRVSD-----DDAVADFEKREEDEEEKE-- 156
Query: 174 EGEGSNVKVEHNCCVCMVRDKGAAFIPCGHTFCRMCSRELWVSRGNCPLCNHFILEVLDI 233
V+ NCCVCMVR KGAAFIPCGHTFCRMCSRE+W SR NCPLCN+ ILE+LDI
Sbjct: 157 ----GLVEYNCNCCVCMVRHKGAAFIPCGHTFCRMCSREIWASRRNCPLCNNLILEILDI 212
Query: 234 F 234
F
Sbjct: 213 F 213
>emb|CAB78352.1| putative protein [Arabidopsis thaliana] gi|5123951|emb|CAB45509.1|
putative protein [Arabidopsis thaliana]
gi|7486126|pir||T10212 hypothetical protein F25G13.190 -
Arabidopsis thaliana gi|15235589|ref|NP_193046.1| zinc
finger (C3HC4-type RING finger) family protein
[Arabidopsis thaliana]
Length = 304
Score = 127 bits (318), Expect = 3e-28
Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 50/267 (18%)
Query: 3 NRQRITLYDQMTSTSNTRSSLASLIQNDAVLSNQKNTNQTLLDIIRENEPNNVVVNVSVT 62
+R R+TL D+M++ N RSS+ + +L + ++ ++L V
Sbjct: 53 DRLRVTLLDRMSTVENGRSSVTL----EDILMAETSSFRSL-----------TTPTTPVR 97
Query: 63 NSSSSSNNNVVK-----DRKSWKAFKELLLFKRR------------------TSDESTHQ 99
N SSSS +V++ D+ +WK+ ++ L KR T D +H+
Sbjct: 98 NHSSSSLLDVMRRERRRDKTAWKSLRDKLRLKRTATGWISSNPIPTLDNHILTPDNDSHR 157
Query: 100 QQQNEDIPTNSDPSEFL-----PGGEFSDETAQVSMSLMDLLEESEIELERIS--DVVDE 152
+ + TNS+ + E ++ ++ + + E E++ R+S +++++
Sbjct: 158 FNRLGFLLTNSETNRSSRDVSDAAEEAAEREGRLRLGTVLAAEREEMQPPRMSLMELLED 217
Query: 153 GDDVEENNEKREEEEEREEEG-EGEGSNVKV----EHNCCVCMVRDKGAAFIPCGHTFCR 207
D R+E E +G +G G V V E CCVCMVR KGAAFIPCGHTFCR
Sbjct: 218 NDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCR 277
Query: 208 MCSRELWVSRGNCPLCNHFILEVLDIF 234
+CSRELWV RGNCPLCN IL+VLDIF
Sbjct: 278 LCSRELWVQRGNCPLCNTAILQVLDIF 304
>gb|AAU05520.1| At3g25030 [Arabidopsis thaliana] gi|9293985|dbj|BAB01888.1| unnamed
protein product [Arabidopsis thaliana]
gi|48958487|gb|AAT47796.1| At3g25030 [Arabidopsis
thaliana] gi|15230243|ref|NP_189139.1| zinc finger
(C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
Length = 250
Score = 125 bits (314), Expect = 1e-27
Identities = 96/263 (36%), Positives = 127/263 (47%), Gaps = 51/263 (19%)
Query: 3 NRQRITLYDQMTSTSNTRSSLASLIQNDAVLSNQKNTN--QTLLDIIRENEPNNVVVNVS 60
+R R+TL D+M++ ++RS L +A+L KN Q L ++ N +V V
Sbjct: 8 DRLRVTLLDRMSTVESSRSCLTL----EAILMADKNRTSPQILSPPPSRSQSNRSLVEVM 63
Query: 61 VTNSSSSSNNNVVKDRKSWKAFKELLLFKRRTSDESTHQQQQNEDIPTNSDPSEFLPGGE 120
S +D+ +WK+ +E L KR S I +NS PS P
Sbjct: 64 QREHRHS------RDKTAWKSLREKLRLKRNGSVW----------ISSNSIPSLDTPIPN 107
Query: 121 FSDETAQVSMSLMD----LLEESEIELE-RISDVVDEGDDVEENNEKREEEEERE----- 170
+ + Q+ L + E S +E R+ V+ E + E+ E E E
Sbjct: 108 RDNVSHQLGFLLSNSGNVTEEASSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMS 167
Query: 171 -----EEGEGEGSNVKV--------------EHNCCVCMVRDKGAAFIPCGHTFCRMCSR 211
EE EG+ S V V E +CCVCMVR KGAAFIPCGHTFCR+CSR
Sbjct: 168 LMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSR 227
Query: 212 ELWVSRGNCPLCNHFILEVLDIF 234
ELWV RGNCPLCN ILEVLD+F
Sbjct: 228 ELWVQRGNCPLCNTTILEVLDLF 250
>ref|NP_914847.1| P0413C03.23 [Oryza sativa (japonica cultivar-group)]
gi|19386767|dbj|BAB86148.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa (japonica cultivar-group)]
Length = 313
Score = 124 bits (312), Expect = 2e-27
Identities = 67/156 (42%), Positives = 90/156 (56%), Gaps = 12/156 (7%)
Query: 89 KRRTSDESTHQQQQNEDIPTNSDPSEFLPGGEFSDETAQVSMSLMDLLEESEIELERISD 148
+R D H + +++ T+ D + + D+ MSLM LLE+S+ + + D
Sbjct: 160 RRAAVDGGGHANEDDDEDHTDDDDDDD-EEEQGKDDAPAAQMSLMALLEQSDSQWDS-ED 217
Query: 149 VVDEGDDVEENNE----------KREEEEEREEEGEGEGSNVKVEHNCCVCMVRDKGAAF 198
D+G R+ + ++E +GEG ++ H CCVCMVR KGAAF
Sbjct: 218 EDDQGHGGGGGGGGNGGGGGGGGARKNGDGDDDEDDGEGREEEMVHVCCVCMVRHKGAAF 277
Query: 199 IPCGHTFCRMCSRELWVSRGNCPLCNHFILEVLDIF 234
IPCGHTFCR+CSRELWVSRGNCPLCN FI E+LDIF
Sbjct: 278 IPCGHTFCRLCSRELWVSRGNCPLCNGFIQEILDIF 313
>ref|NP_849372.2| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
Length = 265
Score = 117 bits (292), Expect = 3e-25
Identities = 80/206 (38%), Positives = 108/206 (51%), Gaps = 32/206 (15%)
Query: 61 VTNSSSSSNNNVVK-----DRKSWKAFKELLLFKRRTS---DESTHQQQQNEDIPTNSDP 112
V N SSSS +V++ D+ +WK+ ++ L KR + + N + ++D
Sbjct: 60 VRNHSSSSLLDVMRRERRRDKTAWKSLRDKLRLKRTATGWISSNPIPTLDNHILTPDNDS 119
Query: 113 SEFLPGGEF--SDETAQVSMSLMDLLEES---------------EIELERIS--DVVDEG 153
F G + ET + S + D EE+ E E R+S +++++
Sbjct: 120 HRFNRLGFLLTNSETNRSSRDVSDAAEEAAEREGRLRLGTVLAAEREPPRMSLMELLEDN 179
Query: 154 DDVEENNEKREEEEEREEEG-EGEGSNVKV----EHNCCVCMVRDKGAAFIPCGHTFCRM 208
D R+E E +G +G G V V E CCVCMVR KGAAFIPCGHTFCR+
Sbjct: 180 DGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRL 239
Query: 209 CSRELWVSRGNCPLCNHFILEVLDIF 234
CSRELWV RGNCPLCN IL+VLDIF
Sbjct: 240 CSRELWVQRGNCPLCNTAILQVLDIF 265
>gb|AAF20234.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|56381891|gb|AAV85664.1| At3g07120 [Arabidopsis
thaliana] gi|58531344|gb|AAW78594.1| At3g07120
[Arabidopsis thaliana] gi|15231396|ref|NP_187368.1| zinc
finger (C3HC4-type RING finger) family protein
[Arabidopsis thaliana]
Length = 360
Score = 116 bits (290), Expect = 6e-25
Identities = 57/138 (41%), Positives = 88/138 (63%), Gaps = 9/138 (6%)
Query: 99 QQQQNEDIPTNSDPSEFLPGGEFSDETAQVSMSLMDLLEESEIELERISD--VVDEGDDV 156
+ + ++D +S +E + S+ + +MSLMDLLEE++ ++ +DE ++
Sbjct: 230 EDEDDDDEEDDSGETEEMKSSSASEP--KQTMSLMDLLEETDRQMGLTGSRYAMDEDEEY 287
Query: 157 EENNEKREEEEEREEEGEGEGSNVKVEHNCCVCMVRDKGAAFIPCGHTFCRMCSRELWVS 216
EE+ E EEE + G GEG E +CCVCMV+ KGA+F PCGHTFC++CS+EL
Sbjct: 288 EEDEEDENNEEEGDSHGGGEG-----ELSCCVCMVKIKGASFTPCGHTFCKLCSKELMAQ 342
Query: 217 RGNCPLCNHFILEVLDIF 234
+G+CP+C+ F+LE L+IF
Sbjct: 343 KGHCPVCSSFVLEFLEIF 360
>gb|AAV63915.1| hypothetical protein At4g03965 [Arabidopsis thaliana]
gi|52354369|gb|AAU44505.1| hypothetical protein
AT4G03965 [Arabidopsis thaliana]
Length = 209
Score = 100 bits (248), Expect = 4e-20
Identities = 57/118 (48%), Positives = 71/118 (59%), Gaps = 22/118 (18%)
Query: 120 EFSDETAQVSMSLMDLLEESEIELERISDVVDEGDDVEENNEKREEEEEREEEGEGEGSN 179
E S + +SLM LLEE+ ER+ VEEN E E S
Sbjct: 111 EASGSLTPLKVSLMRLLEETA---ERVV--------VEEN--------ETERVTASASST 151
Query: 180 VKVEHN---CCVCMVRDKGAAFIPCGHTFCRMCSRELWVSRGNCPLCNHFILEVLDIF 234
V+ +N CCVCM R KGAAFIPCGHTFCR+CSRE+W++RG+CPLCN I+E+LDI+
Sbjct: 152 VRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209
>emb|CAB79180.1| hypothetical protein [Arabidopsis thaliana]
gi|2832675|emb|CAA16775.1| hypothetical protein
[Arabidopsis thaliana] gi|7486835|pir||T04906
hypothetical protein T10I14.80 - Arabidopsis thaliana
Length = 202
Score = 99.4 bits (246), Expect = 7e-20
Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 156 VEENNEKREEEEEREEE--GEGEGSNVKVEHNCCVCMVRDKGAAFIPCGHTFCRMCSREL 213
+EE EK +++ +E E G+ + CCVCM R KGAAFIPCGHTFCR+CSREL
Sbjct: 122 LEETAEKIVDDDGKETEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREL 181
Query: 214 WVSRGNCPLCNHFILEVLDIF 234
W++RG+CPLCN I+E+LDIF
Sbjct: 182 WLNRGSCPLCNRPIIEILDIF 202
>dbj|BAC42910.1| unknown protein [Arabidopsis thaliana] gi|28973395|gb|AAO64022.1|
unknown protein [Arabidopsis thaliana]
gi|30685760|ref|NP_193956.2| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
Length = 214
Score = 99.4 bits (246), Expect = 7e-20
Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 156 VEENNEKREEEEEREEE--GEGEGSNVKVEHNCCVCMVRDKGAAFIPCGHTFCRMCSREL 213
+EE EK +++ +E E G+ + CCVCM R KGAAFIPCGHTFCR+CSREL
Sbjct: 134 LEETAEKIVDDDGKETEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREL 193
Query: 214 WVSRGNCPLCNHFILEVLDIF 234
W++RG+CPLCN I+E+LDIF
Sbjct: 194 WLNRGSCPLCNRPIIEILDIF 214
>ref|XP_483438.1| zinc finger protein family-like [Oryza sativa (japonica
cultivar-group)] gi|42407637|dbj|BAD08751.1| zinc finger
protein family-like [Oryza sativa (japonica
cultivar-group)]
Length = 263
Score = 95.5 bits (236), Expect = 1e-18
Identities = 57/135 (42%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 106 IPTNSDPSEFLPGGEFSDETAQVSMSLMDLLEESEIELERISD------VVDEGDDVEEN 159
+P+ S P+ GE +E +SLM LLE++E + S + +
Sbjct: 137 LPSVSPPTV----GEEEEEEQGERVSLMALLEQTERQWSAGSGATVQQHLASPSAAASAS 192
Query: 160 NEKREEEEEREEEGEGEGSNVKVEHNCCVCMVRDKGAAFIPCGHTFCRMCSRELWVSRGN 219
E+E E G+G CCVCM R KGAAFIPCGHTFCR C+REL RG
Sbjct: 193 VSAAAEDEAEAEAGKGAAGG----GCCCVCMARAKGAAFIPCGHTFCRTCARELLAGRGR 248
Query: 220 CPLCNHFILEVLDIF 234
CPLCN IL+VLDIF
Sbjct: 249 CPLCNAAILDVLDIF 263
>emb|CAB80819.1| putative protein [Arabidopsis thaliana] gi|7487406|pir||T01867
hypothetical protein T24M8.4 - Arabidopsis thaliana
gi|3319370|gb|AAC28219.1| contains similarity to
C3HC4-type zinc fingers (Pfam: zf-C3HC4.hmm, score:
32.94) [Arabidopsis thaliana]
Length = 233
Score = 94.4 bits (233), Expect = 2e-18
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 186 CCVCMVRDKGAAFIPCGHTFCRMCSRELWVSRGNCPLCNHFILEVLDIF 234
CCVCM R KGAAFIPCGHTFCR+CSRE+W++RG+CPLCN I+E+LDI+
Sbjct: 185 CCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 233
>gb|AAF70837.1| F2401.10 [Arabidopsis thaliana] gi|15220769|ref|NP_176427.1| zinc
finger (C3HC4-type RING finger) family protein
[Arabidopsis thaliana] gi|7486109|pir||T01447
hypothetical protein F24O1.9 - Arabidopsis thaliana
Length = 204
Score = 93.6 bits (231), Expect = 4e-18
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 17/144 (11%)
Query: 94 DESTHQQQQNEDIPTNSDPSEFLPGGEFSDETAQVSMSLMDLLEESEIELERISDVVDEG 153
D+ ++ QN+ + SDP G E T + +L + L E ER++ V +E
Sbjct: 75 DDDDEEESQNQVVDF-SDPGT---GTELDCLTRGSTRNLAEALAE-----ERLAHVTEEE 125
Query: 154 DDVEENNEKREEEEEREEEGEGEGSNVKVEHN---CCVCMVRDKGAAFIPCGHTFCRMCS 210
V + R E +G S N CCVCM R+KGAAFIPCGHT+CR+CS
Sbjct: 126 TAVTKVPLMR-----LLAESDGCDSTTTWLGNDPLCCVCMGREKGAAFIPCGHTYCRVCS 180
Query: 211 RELWVSRGNCPLCNHFILEVLDIF 234
RE+W++RG CPLCN I +VLD++
Sbjct: 181 REIWMNRGTCPLCNRSIFDVLDLY 204
>gb|EAA18507.1| processed variable antigen-related [Plasmodium yoelii yoelii]
Length = 623
Score = 55.5 bits (132), Expect = 1e-06
Identities = 43/197 (21%), Positives = 80/197 (39%), Gaps = 14/197 (7%)
Query: 44 LDIIRENEPNNVVVNVSVTNSSSSSNN-NVVKDRKSWKAFKELLLFKRRTSDESTHQQQQ 102
LD+ ++ V V T + + K+ K K KE K + + +
Sbjct: 13 LDVNLSMHESSEVKEVKETKEAKEAEEAEEAKEAKEVKEAKEAKEVKEVNEAKEVKEVNE 72
Query: 103 NEDIPTNSDPSEFLPGGEFSDETAQVSMSLMDLLEESEIELERISDV-VDEGDDVEENNE 161
+++ T + GE ++ + + M + + E+ ++S+ ++ +D +E +E
Sbjct: 73 AKEV-TEIRSGDLFKNGELNNNKSSIEMENKKIDKSLELNKNKVSNSELNIFEDAKEYDE 131
Query: 162 KREEEEEREEEGEGEGS--NVKVEHN---------CCVCMVRDKGAAFIPCGHTFCRMCS 210
++E E++E + N EHN C +CM IPCGH FCR C
Sbjct: 132 SNKDEFEKKENTNDNNNILNKNSEHNEKQISSDLECVICMKLLIMPVTIPCGHNFCRDCL 191
Query: 211 RELWVSRGNCPLCNHFI 227
+ CPLC ++
Sbjct: 192 EKAKEYNDTCPLCRSYM 208
>ref|XP_665952.1| hypothetical protein Chro.80501 [Cryptosporidium hominis]
gi|54656833|gb|EAL35722.1| hypothetical protein
Chro.80501 [Cryptosporidium hominis]
Length = 996
Score = 54.3 bits (129), Expect = 3e-06
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 4 RQRITLYDQMTSTSNTRSSLASLIQNDAVLSNQKNTNQTLLDIIRENEPNNVVVNVSVTN 63
R R +L +++ + N S + S++ + ++K+ +LL NN+ N SVT+
Sbjct: 230 RHRESLEEELVNLDNAFSQVQSML---SYKQSRKDRVNSLL--------NNINSNSSVTD 278
Query: 64 SSSSSNNNV-----------VKDRKSWKAFKELLLFKRRTSDESTHQQQQNEDIPTNSDP 112
++S+ NNN +++ ++ + LL F RT S + E N++
Sbjct: 279 NNSNDNNNNNNNNIRSFDKNIEELDEYEQLRNLLKFDTRTG-VSDRIKTDEEIAKLNAEK 337
Query: 113 SEFLPGGEFSDETAQVSMSLMDLLEESEIELERISDVVDEGD-------------DVEEN 159
E L + E + S +D+ +E E E D D+ D + EE
Sbjct: 338 LERLE--KERKERMNLDDSNIDIDLSTESENEYFKDDFDDEDGEEEDGFEEEEEEEKEEG 395
Query: 160 NEKREEEEEREEEGEGEGSNVKVEHNC 186
E+ EEEEE EEE E E KVE +C
Sbjct: 396 EEEEEEEEEEEEEEEEEDEEQKVEEDC 422
>ref|YP_024644.1| ORF106 [Ostreid herpesvirus 1] gi|41352484|gb|AAS00991.1| ORF106
[Ostreid herpesvirus 1]
Length = 465
Score = 52.4 bits (124), Expect = 1e-05
Identities = 31/85 (36%), Positives = 46/85 (53%), Gaps = 14/85 (16%)
Query: 164 EEEEEREEEGEGEG------SNVKVEH----NCCVCMVRDKGAAFIPCGHTF-CRMCSRE 212
E E++EE+G G G +N +VE+ +C C R AFIPCGH F C +C+ E
Sbjct: 373 EGGEDKEEDGGGGGVIEFPKNNKEVENPKRGSCKACYERKADIAFIPCGHVFSCNICTME 432
Query: 213 LWVS---RGNCPLCNHFILEVLDIF 234
++ S + CP+C + +V IF
Sbjct: 433 MFASYKKKKRCPMCRVHVEKVQKIF 457
>ref|XP_636266.1| hypothetical protein DDB0188369 [Dictyostelium discoideum]
gi|60464621|gb|EAL62755.1| hypothetical protein
DDB0188369 [Dictyostelium discoideum]
Length = 1528
Score = 51.2 bits (121), Expect = 2e-05
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 7/178 (3%)
Query: 15 STSNTRSSLASLIQNDAVLSNQKNTNQTLLDIIRENEPNNVVVNVSVTNSSSS----SNN 70
+ +N ++ +L Q+ + NTN + N N+ + TN SSS SN+
Sbjct: 974 NNNNNNNNSTNLNQSKVPTTTTTNTNNNNNNNNNNNNSTNLNQSKVPTNESSSTLTASND 1033
Query: 71 NVVKDRKSWKAFKELLLFKRRTSDE-STHQQQQNEDIPTNSDPSEFLPGGEFSDETAQVS 129
++K+ +S++ + + K + + + NE+ N + E E +E +
Sbjct: 1034 TIIKNFRSFEIDRSPTIKKNKEKEIIKNNHDNDNENENKNENEKENDNQNEKENENENEN 1093
Query: 130 MSLMDLLEESEI--ELERISDVVDEGDDVEENNEKREEEEEREEEGEGEGSNVKVEHN 185
+ + E+EI E E ++ +E ++ EN K E E E+E E E + N V N
Sbjct: 1094 KNKNENKNENEIKNENENENENENENENENENENKNENENEKENENENKNKNENVNEN 1151
Score = 39.3 bits (90), Expect = 0.091
Identities = 35/183 (19%), Positives = 75/183 (40%), Gaps = 13/183 (7%)
Query: 3 NRQRITLYDQMTSTSNTRSSLASLIQNDAVLSNQKNTNQTLLDIIRENEPNNVVVNVSVT 62
N L T+ + S+L + ND ++ N ++ I++N+ ++ N +
Sbjct: 1008 NNNSTNLNQSKVPTNESSSTLTA--SNDTIIKNFRSFEIDRSPTIKKNKEKEIIKN-NHD 1064
Query: 63 NSSSSSNNNVVKDRKSWKAFKELLLFKRRTSDESTHQQQQNEDIPTNSDPSEFLPGGEFS 122
N + + N N + + KE ++ + +NE+ N + +E E
Sbjct: 1065 NDNENENKNENEKENDNQNEKE----NENENENKNKNENKNENEIKNENENENENENENE 1120
Query: 123 DETAQVSMSLMDLLEESEIELERISDVVDEGDDVEENNEKREEEEEREEEGEGEGSNVKV 182
+E + + E+E E E ++ ++ ++V EN ++EEE+E +N
Sbjct: 1121 NENENENKN------ENENEKENENENKNKNENVNENKNEQEEEKENNNNNNNNNNNNNN 1174
Query: 183 EHN 185
+N
Sbjct: 1175 NNN 1177
Score = 38.5 bits (88), Expect = 0.15
Identities = 28/151 (18%), Positives = 61/151 (39%), Gaps = 14/151 (9%)
Query: 48 RENEPNNVVVNVSVTNSSSSSNNNVVKDRKSWKAFKELLLFKRRTSDESTHQQQQNEDIP 107
+ N+P + T +++++NNN + S + + T+ + + N +
Sbjct: 952 KSNQPTGANTTTTTTTTNTNTNNNNNNNNNSTNLNQSKVPTTTTTNTNNNNNNNNNNNNS 1011
Query: 108 TNSDPSEFLPGGEFSDETAQVSMSLMDLLEESEIE-------------LERISDVVDEGD 154
TN + S+ +P E S + +++ EI+ ++ D +E +
Sbjct: 1012 TNLNQSK-VPTNESSSTLTASNDTIIKNFRSFEIDRSPTIKKNKEKEIIKNNHDNDNENE 1070
Query: 155 DVEENNEKREEEEEREEEGEGEGSNVKVEHN 185
+ EN ++ + + E+E E E E N N
Sbjct: 1071 NKNENEKENDNQNEKENENENENKNKNENKN 1101
Score = 35.4 bits (80), Expect = 1.3
Identities = 32/164 (19%), Positives = 71/164 (42%), Gaps = 26/164 (15%)
Query: 18 NTRSSLASLIQNDAVLSNQKNTNQTLLDIIRENEPNNVVVNVSVTNSSSSSNNNVVKDRK 77
NT ++ ++ N+ + +N KN N ++ + + NN++ N N++ + NNN+ + K
Sbjct: 1367 NTNNNYNNINNNNNINNNNKNNNNNVV----KTQNNNIIQNNINNNNNKNLNNNIGNNDK 1422
Query: 78 SWKAFKELLLFKRRTSDESTHQQQQNEDIPTNSDPSEFLPGGEFSDETAQVSMSLMDLLE 137
+ K + + + + N + TN+ E + SD +
Sbjct: 1423 NDDNNK-----LNKNDNINKNYNNNNNENDTNNSEDENVGNNTSSDTDSN---------- 1467
Query: 138 ESEIELERISDVVDEGDDVEENNEKREEEEEREEEGEGEGSNVK 181
E++++ D G++ EN E + E E+G+ S+++
Sbjct: 1468 ------EKVNENQD-GNESFENEEIDSNDGESNEDGDHLVSSIQ 1504
>ref|XP_638708.1| hypothetical protein DDB0220640 [Dictyostelium discoideum]
gi|60467321|gb|EAL65353.1| CHD gene family protein
containing chromodomain, helicase domain, and
DNA-binding domain [Dictyostelium discoideum]
Length = 1917
Score = 50.8 bits (120), Expect = 3e-05
Identities = 38/153 (24%), Positives = 69/153 (44%), Gaps = 6/153 (3%)
Query: 29 NDAVLSNQKNTNQTLLDIIRENEPNNVVVNVSVTNSSSSSNNNVVKDRKSWKAFKELLLF 88
N++ N N N +I + PNN N + N+ +++NN + KD ++K +
Sbjct: 167 NNSNSGNNNNNNNNNNNIFNQTIPNNNSNNNNNNNNINNNNNGLKKDISNFKGNESSSSE 226
Query: 89 KRRTSDESTHQQQQNEDIPTNSDPSEFLP---GGEFSDETAQVSMSLMDLLEESEIELER 145
S S + + ED P N ++ L E +E V+ ++++ + + E
Sbjct: 227 SSSESSSSEEESESQEDTP-NKQRNKVLTQQLASESEEELQPVNKKKSTMVKKVDSDFES 285
Query: 146 ISDVVDE--GDDVEENNEKREEEEEREEEGEGE 176
DV +E G D + + E E EE+ EE+ E +
Sbjct: 286 EEDVEEEQSGKDNDSDYEPSESEEQSEEDYESD 318
>ref|XP_419487.1| PREDICTED: similar to Ubiquitin ligase protein RNF8 (RING finger
protein 8) [Gallus gallus]
Length = 490
Score = 50.4 bits (119), Expect = 4e-05
Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 19/204 (9%)
Query: 37 KNTNQTLLDI----IRENEPNNVVVNVSVTNSSSSSNNNVVKDRKSWKAFKELLLFKRRT 92
+N +TL+DI ++ E V+ ++ + +++ + L K RT
Sbjct: 242 ENLRKTLIDIKKLKVKVQEKQTAVLTAKQKRRKAAQKTILAMEKELQE-----LQDKLRT 296
Query: 93 SDESTHQQQQNEDIPTNSDPSEFLPGGEFSDETAQVSMSLMDLLEESEIELERISDVVDE 152
++ HQQQ E T + L G ++ D + L +L+E +E +S +
Sbjct: 297 -EQVQHQQQVEELERTFCKEKQKLEGVKWKDGEENLKEQLAQVLQEHHALMEELSRSKKD 355
Query: 153 GDDV--------EENNEKREEEEEREEEGEGEGSNV-KVEHNCCVCMVRDKGAAFIPCGH 203
+++ EE ++E+ ++EE + ++V + E C +C A + C H
Sbjct: 356 FEEIIRAKNKELEETKVEKEKVRAQKEEVLNQMNDVLENELQCTICSEHFIEAVTLNCAH 415
Query: 204 TFCRMCSRELWVSRGNCPLCNHFI 227
+FC C E + CP+C I
Sbjct: 416 SFCSYCIDEWTKRKVECPICRQEI 439
>gb|EAK89575.1| conserved protein [Cryptosporidium parvum]
gi|66361603|ref|XP_627325.1| hypothetical protein
cgd8_4370 [Cryptosporidium parvum]
Length = 1000
Score = 49.7 bits (117), Expect = 7e-05
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 4 RQRITLYDQMTSTSNTRSSLASLIQNDAVLSNQKNTNQTLLDIIRENEPNNVVVNVSVTN 63
R R +L +++ + + S + S++ + ++K+ +LL NN+ N SVT+
Sbjct: 229 RHRESLEEELVNLDSAFSQVQSML---SYKQSRKDRVNSLL--------NNINSNSSVTD 277
Query: 64 SSSSSNNNVVKDRK-----SWKAFKELLLFKRRTSDESTHQQQQNEDIPTNSDPSEFLPG 118
++ + NN D+ ++ + LL F RT S + E N++ E L
Sbjct: 278 NNGNDNNIQSSDKNIEELDEYEQLRNLLKFDTRTG-VSDRIKTDEEIAKLNAEKLERLEK 336
Query: 119 GEFSDETAQVSMSLMDLLEESEIEL-----------------ERISDVVDEGDDVEENNE 161
S +DL ESE E + D +E ++ EE E
Sbjct: 337 ERKERMNLDDSNIDIDLSTESENEYFKDDFDDEDGEEEDGFEDEEEDEEEEEEEEEEEEE 396
Query: 162 KREEEEEREEEGEGEGSNVKVEHNC 186
+ EEEEE EEE E E KVE +C
Sbjct: 397 EEEEEEEEEEEEEEEDEGRKVEKDC 421
Score = 36.2 bits (82), Expect = 0.77
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 12/185 (6%)
Query: 11 DQMTSTSNTRSSLASLIQNDAVLSNQKNTNQTLLDIIRENEPNNVV-------VNVSVTN 63
D++ S N +S +S+ N+ +N +++++ + ++ + N++ V+ +
Sbjct: 260 DRVNSLLNNINSNSSVTDNNGNDNNIQSSDKNIEELDEYEQLRNLLKFDTRTGVSDRIKT 319
Query: 64 SSSSSNNNVVKDRKSWKAFKELLLFKRRTSDESTHQQQQNEDIPTNSDPSEFLPGGEFSD 123
+ N K + K KE + D + +NE + D + F D
Sbjct: 320 DEEIAKLNAEKLERLEKERKERMNLDDSNIDIDLSTESENEYFKDDFDDEDGEEEDGFED 379
Query: 124 ETA-----QVSMSLMDLLEESEIELERISDVVDEGDDVEENNEKREEEEEREEEGEGEGS 178
E + + EE E E E + DEG VE++ + EEE+ EE +GE
Sbjct: 380 EEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEGRKVEKDCFEEEEEDGEGEEEDGEDD 439
Query: 179 NVKVE 183
+V+
Sbjct: 440 EERVK 444
>ref|XP_419932.1| PREDICTED: similar to myelin transcription factor 1-like [Gallus
gallus]
Length = 1352
Score = 49.7 bits (117), Expect = 7e-05
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 94 DESTHQQQQNEDIPTNSDPSEFLPGGEFSDETAQVSMSLMDLLEESEIELERISDVVDEG 153
++ +++++E+ SD ++ E DE +D EE EIE E D +EG
Sbjct: 101 EKEEEEEEEDEEEEEYSDDNDDQGDEEEDDEE-------IDREEEEEIEEEEEEDE-EEG 152
Query: 154 DDVEENNEKREEEEEREEEGEGEGSNVKV 182
+DVE+ E+ EEEEE EEE E G+N +
Sbjct: 153 EDVEDEEEEEEEEEEEEEEEEERGNNQSI 181
Score = 38.5 bits (88), Expect = 0.15
Identities = 25/66 (37%), Positives = 36/66 (53%), Gaps = 4/66 (6%)
Query: 122 SDETAQVSMSLMDLLEESEIELERISDVVDEGDDVEENNE----KREEEEEREEEGEGEG 177
+D T ++ + EE E E E D D+GD+ E++ E + EE EE EEE E EG
Sbjct: 93 TDGTEEMDEKEEEEEEEDEEEEEYSDDNDDQGDEEEDDEEIDREEEEEIEEEEEEDEEEG 152
Query: 178 SNVKVE 183
+V+ E
Sbjct: 153 EDVEDE 158
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 398,365,327
Number of Sequences: 2540612
Number of extensions: 17629922
Number of successful extensions: 270031
Number of sequences better than 10.0: 5659
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 3723
Number of HSP's that attempted gapping in prelim test: 211323
Number of HSP's gapped (non-prelim): 25561
length of query: 234
length of database: 863,360,394
effective HSP length: 124
effective length of query: 110
effective length of database: 548,324,506
effective search space: 60315695660
effective search space used: 60315695660
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 73 (32.7 bits)
Medicago: description of AC144721.14