BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144541.14 - phase: 0 
         (63 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_198138.2| expressed protein [Arabidopsis thaliana]             100  1e-20
emb|CAH68932.1| novel protein [Danio rerio] gi|66472800|ref|NP_0...    58  6e-08
ref|XP_429844.1| PREDICTED: hypothetical protein XP_429844 [Gall...    55  5e-07
emb|CAF91964.1| unnamed protein product [Tetraodon nigroviridis]       54  1e-06
emb|CAH03637.1| hypothetical protein [Paramecium tetraurelia] gi...    32  3.4
emb|CAA21310.1| SPBC1734.16c [Schizosaccharomyces pombe] gi|1911...    32  4.4
gb|AAW83089.1| YdcA [Neisseria gonorrhoeae]                            32  4.4

>ref|NP_198138.2| expressed protein [Arabidopsis thaliana]
          Length = 177

 Score =  100 bits (249), Expect = 1e-20
 Identities = 51/61 (83%), Positives = 55/61 (89%)

Query: 3   GERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASF 62
           GE SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DK+KEDK AESKRNELL FLNASF
Sbjct: 117 GEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASF 176

Query: 63  D 63
           D
Sbjct: 177 D 177


>emb|CAH68932.1| novel protein [Danio rerio] gi|66472800|ref|NP_001018615.1|
           hypothetical protein LOC553945 [Danio rerio]
          Length = 175

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)

Query: 4   ERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASF 62
           + SS PVQ+SK+L   K  G + S +SGKKI +K+ K+K+DK+ +  R ELL+FLN+++
Sbjct: 118 DESSGPVQISKYLKEKKKSG-KYSMISGKKIKMKVKKSKKDKQRDKNRAELLDFLNSTY 175


>ref|XP_429844.1| PREDICTED: hypothetical protein XP_429844 [Gallus gallus]
          Length = 267

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 28/58 (48%), Positives = 39/58 (66%), Gaps = 1/58 (1%)

Query: 4   ERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNAS 61
           +  + PVQLSKF  +NK      S ++GKKI +K+ KTK+DKE +  R ELL FLN++
Sbjct: 210 KEKTGPVQLSKFF-KNKKKNENYSMITGKKIKMKIKKTKKDKERDRNRAELLEFLNSA 266


>emb|CAF91964.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 160

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)

Query: 4   ERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNAS 61
           E +S PVQ+SK+L   K    + S +SGKKI +K+ K+KEDK+ +  R ELL FLN++
Sbjct: 104 EENSGPVQISKYLKDRKKG--KYSMISGKKIKMKVKKSKEDKKRDKNRAELLEFLNST 159


>emb|CAH03637.1| hypothetical protein [Paramecium tetraurelia]
           gi|50405275|ref|YP_054367.1| hypothetical protein
           PTMB.436 [Paramecium tetraurelia]
          Length = 899

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 18/49 (36%), Positives = 26/49 (52%), Gaps = 2/49 (4%)

Query: 14  KFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASF 62
           K L  NK D   +   S  K +L +D+  +D++  S RN L+N  N SF
Sbjct: 767 KILKTNKQDS--KILTSDNKRILMVDELDKDQDVSSLRNSLVNLSNISF 813


>emb|CAA21310.1| SPBC1734.16c [Schizosaccharomyces pombe]
          gi|19112225|ref|NP_595433.1| hypothetical protein
          SPBC1734.16c [Schizosaccharomyces pombe 972h-]
          gi|7492269|pir||T39663 paired amphipathic helix,
          probable transcription regulator protein - fission
          yeast (Schizosaccharomyces pombe)
          Length = 1154

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 5  RSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKE 46
          +S SPV  S   G  KD+GV    V  K+IL +   T++D E
Sbjct: 35 QSQSPVNTSLHNGDGKDNGVATEPVENKQILSERSVTRDDYE 76


>gb|AAW83089.1| YdcA [Neisseria gonorrhoeae]
          Length = 100

 Score = 32.0 bits (71), Expect = 4.4
 Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 5  RSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDK-EAESKRNELLNFLNAS 61
          +++ P  + K LG  K D +R S + G ++LL+ + T+E++ E +    + L+FL  S
Sbjct: 13 QTTIPESVRKALGLEKQDKIRFSVLGGGQVLLEKNNTEEEEFEHDPVVGKFLHFLENS 70


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.307    0.129    0.336 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,508,939
Number of Sequences: 2540612
Number of extensions: 2862170
Number of successful extensions: 8012
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8005
Number of HSP's gapped (non-prelim): 7
length of query: 63
length of database: 863,360,394
effective HSP length: 39
effective length of query: 24
effective length of database: 764,276,526
effective search space: 18342636624
effective search space used: 18342636624
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 68 (30.8 bits)