BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144516.12 - phase: 0
(105 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB75803.1| allyl alcohol dehydrogenase-like protein [Arabid... 114 6e-25
gb|AAM62901.1| unknown [Arabidopsis thaliana] gi|20148537|gb|AAM... 114 6e-25
ref|XP_652079.1| NAD(FAD)-dependent dehydrogenase, putative [Ent... 33 1.7
ref|XP_649611.1| NAD(FAD)-dependent dehydrogenase, putative [Ent... 33 1.7
ref|XP_649234.1| glycerol-3-phosphate dehydrogenase, putative [E... 33 1.7
ref|XP_648977.1| NAD(FAD)-dependent dehydrogenase, putative [Ent... 33 1.7
gb|AAK81873.1| hunchback transcription factor [Locusta migratoria] 33 1.7
gb|AAK81872.1| hunchback transcription factor [Locusta migratoria] 33 1.7
ref|XP_526750.1| PREDICTED: similar to 60S ribosomal protein L6 ... 33 2.2
ref|XP_590270.1| PREDICTED: similar to chromosome 6 open reading... 33 2.2
gb|AAV66011.1| alcohol dehydrogenase [Carex umbellata] 32 2.9
gb|EAA69339.1| hypothetical protein FG09994.1 [Gibberella zeae P... 32 4.9
gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus ... 32 4.9
ref|ZP_00534045.1| OmpA/MotB [Chlorobium phaeobacteroides BS1] g... 31 6.5
emb|CAI17194.1| RP11-98I9.2 [Homo sapiens] 31 6.5
gb|AAV66060.1| alcohol dehydrogenase [Carex albicans var. albica... 31 6.5
gb|AAV66059.1| alcohol dehydrogenase [Carex brainerdii] gi|55818... 31 6.5
gb|AAV66052.1| alcohol dehydrogenase [Carex tonsa var. rugosperma] 31 6.5
gb|AAV66046.1| alcohol dehydrogenase [Carex globosa] 31 6.5
emb|CAH01652.1| unnamed protein product [Kluyveromyces lactis NR... 31 6.5
>emb|CAB75803.1| allyl alcohol dehydrogenase-like protein [Arabidopsis thaliana]
gi|11357163|pir||T47808 allyl alcohol dehydrogenase-like
protein - Arabidopsis thaliana
Length = 462
Score = 114 bits (285), Expect = 6e-25
Identities = 61/105 (58%), Positives = 71/105 (67%), Gaps = 8/105 (7%)
Query: 1 MGLLWWRKGKNSQPEAKLSTTENAAKNGGASAVKPTTEAPGMNGAVEVKRPKNASVSVFE 60
MG+L W G +++ S E K T APGMNGA+EV RP A+V FE
Sbjct: 366 MGILSWFTGSPKPSQSETSKPEMI------QMPKSETPAPGMNGAIEVPRPDRATV--FE 417
Query: 61 FGSVAASNDKVTLAGYCPVSEDLEPCRWEILPAVESNAPQFRVVF 105
FGSVAA+ D+VTLAGYCPVS+DLEPCRWEILPA +APQFRVVF
Sbjct: 418 FGSVAATGDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFRVVF 462
>gb|AAM62901.1| unknown [Arabidopsis thaliana] gi|20148537|gb|AAM10159.1| allyl
alcohol dehydrogenase-like protein [Arabidopsis
thaliana] gi|17473784|gb|AAL38327.1| allyl alcohol
dehydrogenase-like protein [Arabidopsis thaliana]
gi|18411349|ref|NP_567086.1| expressed protein
[Arabidopsis thaliana] gi|51970082|dbj|BAD43733.1|
unknown protein [Arabidopsis thaliana]
Length = 97
Score = 114 bits (285), Expect = 6e-25
Identities = 61/105 (58%), Positives = 71/105 (67%), Gaps = 8/105 (7%)
Query: 1 MGLLWWRKGKNSQPEAKLSTTENAAKNGGASAVKPTTEAPGMNGAVEVKRPKNASVSVFE 60
MG+L W G +++ S E K T APGMNGA+EV RP A+V FE
Sbjct: 1 MGILSWFTGSPKPSQSETSKPEMI------QMPKSETPAPGMNGAIEVPRPDRATV--FE 52
Query: 61 FGSVAASNDKVTLAGYCPVSEDLEPCRWEILPAVESNAPQFRVVF 105
FGSVAA+ D+VTLAGYCPVS+DLEPCRWEILPA +APQFRVVF
Sbjct: 53 FGSVAATGDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFRVVF 97
>ref|XP_652079.1| NAD(FAD)-dependent dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS] gi|56468885|gb|EAL46692.1| NAD(FAD)-dependent
dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 1066
Score = 33.1 bits (74), Expect = 1.7
Identities = 17/75 (22%), Positives = 34/75 (44%), Gaps = 4/75 (5%)
Query: 28 GGASAVKPTTEAPGMNGAVEVKRPKNASVSVFEFGSVAAS----NDKVTLAGYCPVSEDL 83
G K E P +N +E+ + KN V ++++ + ++ + A YCP + L
Sbjct: 89 GELMVAKTDEEIPNLNKYMEIAKTKNVPVELWDYEKIHKEEPNLSENIKKAIYCPTTSVL 148
Query: 84 EPCRWEILPAVESNA 98
+P + I + + A
Sbjct: 149 DPYEFTIATCLTAKA 163
>ref|XP_649611.1| NAD(FAD)-dependent dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS] gi|56466090|gb|EAL44225.1| NAD(FAD)-dependent
dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 1070
Score = 33.1 bits (74), Expect = 1.7
Identities = 17/75 (22%), Positives = 34/75 (44%), Gaps = 4/75 (5%)
Query: 28 GGASAVKPTTEAPGMNGAVEVKRPKNASVSVFEFGSVAAS----NDKVTLAGYCPVSEDL 83
G K E P +N +E+ + KN V ++++ + ++ + A YCP + L
Sbjct: 92 GELMVAKTDEEIPNLNKYMEIAKTKNVPVELWDYEKIHKEEPNLSENIKKAIYCPTTSVL 151
Query: 84 EPCRWEILPAVESNA 98
+P + I + + A
Sbjct: 152 DPYEFTIATCLTAKA 166
>ref|XP_649234.1| glycerol-3-phosphate dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS] gi|56465633|gb|EAL43857.1|
glycerol-3-phosphate dehydrogenase, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 384
Score = 33.1 bits (74), Expect = 1.7
Identities = 17/75 (22%), Positives = 34/75 (44%), Gaps = 4/75 (5%)
Query: 28 GGASAVKPTTEAPGMNGAVEVKRPKNASVSVFEFGSVAAS----NDKVTLAGYCPVSEDL 83
G K E P +N +E+ + KN V ++++ + ++ + A YCP + L
Sbjct: 92 GELMVAKTDEEIPNLNKYMEIAKTKNVPVELWDYEKIHKEEPNLSENIKKAIYCPTTSVL 151
Query: 84 EPCRWEILPAVESNA 98
+P + I + + A
Sbjct: 152 DPYEFTIATCLTAKA 166
>ref|XP_648977.1| NAD(FAD)-dependent dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS] gi|56465305|gb|EAL43592.1| NAD(FAD)-dependent
dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 931
Score = 33.1 bits (74), Expect = 1.7
Identities = 17/75 (22%), Positives = 34/75 (44%), Gaps = 4/75 (5%)
Query: 28 GGASAVKPTTEAPGMNGAVEVKRPKNASVSVFEFGSVAAS----NDKVTLAGYCPVSEDL 83
G K E P +N +E+ + KN V ++++ + ++ + A YCP + L
Sbjct: 89 GELMVAKTDEEIPNLNKYMEIAKTKNVPVELWDYEKIHKEEPNLSENIKKAIYCPTTSVL 148
Query: 84 EPCRWEILPAVESNA 98
+P + I + + A
Sbjct: 149 DPYEFTIATCLTAKA 163
>gb|AAK81873.1| hunchback transcription factor [Locusta migratoria]
Length = 512
Score = 33.1 bits (74), Expect = 1.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 7 RKGKNSQPEAKLSTTENAAKNGG---ASAVKPTTEAPGMNGAVEVKRPKNASVSVFEFGS 63
R+G +P A + +NAA NGG A+A P P A++ ++P+ S + +
Sbjct: 139 RRGPKQRPRAAAAAKKNAASNGGQASAAARSPVPAPPQPQAAIQPRQPQLPSAPLVPHAA 198
Query: 64 VA 65
A
Sbjct: 199 TA 200
>gb|AAK81872.1| hunchback transcription factor [Locusta migratoria]
Length = 846
Score = 33.1 bits (74), Expect = 1.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 7 RKGKNSQPEAKLSTTENAAKNGG---ASAVKPTTEAPGMNGAVEVKRPKNASVSVFEFGS 63
R+G +P A + +NAA NGG A+A P P A++ ++P+ S + +
Sbjct: 473 RRGPKQRPRAAAAAKKNAASNGGQASAAARSPVPAPPQPQAAIQPRQPQLPSAPLVPHAA 532
Query: 64 VA 65
A
Sbjct: 533 TA 534
>ref|XP_526750.1| PREDICTED: similar to 60S ribosomal protein L6 (TAX-responsive
enhancer element binding protein 107) (TAXREB107)
(Neoplasm-related protein C140) [Pan troglodytes]
Length = 350
Score = 32.7 bits (73), Expect = 2.2
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 7 RKGKNSQPEAKLSTTENAAKNGGASAVK--------PTTEAPGMNGAVEVKRPKNASVSV 58
+K K + A ++ KNGGA VK PT +AP +GA+ K +N SVS
Sbjct: 116 KKKKKKKILATVTKPAEDDKNGGAWMVKLPEMPTYAPTQDAPWNHGALANKTKQNPSVST 175
Query: 59 FEFGSVAASNDKVTLAGYCP 78
+ V ++ KV ++ P
Sbjct: 176 TYWKFVITTSIKVAISVKIP 195
>ref|XP_590270.1| PREDICTED: similar to chromosome 6 open reading frame 111, partial
[Bos taurus]
Length = 522
Score = 32.7 bits (73), Expect = 2.2
Identities = 15/45 (33%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 11 NSQPEAKLSTTENAAKNGGA-SAVKPTTEAPGMNGAVEVKRPKNA 54
+S+ ++K STT+++ K+ G+ S+ + ++E+PG + +VK+PK++
Sbjct: 452 DSRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEKKVKKPKHS 496
>gb|AAV66011.1| alcohol dehydrogenase [Carex umbellata]
Length = 156
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 41 GMNGAVEV-KRPKNASVSVFEFGSVAASNDKVTLAGYCP-VSEDLEPCRWEI 90
G+ + V K PK +SV++F G+V + + L+G P + DL P R+E+
Sbjct: 75 GLGATLNVAKPPKGSSVAIFGLGAVGLAAEGARLSGASPIIGVDLNPNRFEL 126
>gb|EAA69339.1| hypothetical protein FG09994.1 [Gibberella zeae PH-1]
gi|46136957|ref|XP_390170.1| hypothetical protein
FG09994.1 [Gibberella zeae PH-1]
Length = 1220
Score = 31.6 bits (70), Expect = 4.9
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 19 STTENAAKNGGASAVKPTTEAPGMNGAVEVKRPKNASVSVFEFGSVAASNDKV 71
+T N N A P AP + A K+ A+ S+F FG + DK+
Sbjct: 744 TTASNLFGNTSTPAAAPLFGAPSSSDATAAKKDTPATTSMFSFGGASNGADKI 796
>gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 31.6 bits (70), Expect = 4.9
Identities = 25/82 (30%), Positives = 32/82 (38%), Gaps = 14/82 (17%)
Query: 7 RKGKNSQPEAKLSTTENAAKNGGASAVKP-----------TTEAPGMNGAVEVKRPKNAS 55
RKG+ S+P+ T A+N ASA T P NG V P +
Sbjct: 137 RKGRPSEPKPDTGTP---ARNKAASATPAQTPVPLAPPPVVTPVPEKNGDVSDAHPSSTQ 193
Query: 56 VSVFEFGSVAASNDKVTLAGYC 77
FE A ++D V L YC
Sbjct: 194 KRKFEVHQEAPASDTVRLDYYC 215
>ref|ZP_00534045.1| OmpA/MotB [Chlorobium phaeobacteroides BS1]
gi|67911617|gb|EAM61590.1| OmpA/MotB [Chlorobium
phaeobacteroides BS1]
Length = 557
Score = 31.2 bits (69), Expect = 6.5
Identities = 20/70 (28%), Positives = 31/70 (43%), Gaps = 5/70 (7%)
Query: 18 LSTTENAAKNGGASAVKPTTEAPGMNGAVEVKRPKNASVSVFEFGSVAASNDKVTLAGYC 77
L+ + +A G KP +E E R KN V +F + D+V +A
Sbjct: 184 LNLSADAINTGTEGPFKPISE-----NDTEAGRAKNRRVEIFISYDQTVTVDEVVIAKAA 238
Query: 78 PVSEDLEPCR 87
PV+ ++EP R
Sbjct: 239 PVAAEIEPLR 248
>emb|CAI17194.1| RP11-98I9.2 [Homo sapiens]
Length = 805
Score = 31.2 bits (69), Expect = 6.5
Identities = 14/45 (31%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 11 NSQPEAKLSTTENAAKNGGA-SAVKPTTEAPGMNGAVEVKRPKNA 54
+S+ ++K STT+++ K+ G+ S+ + ++E+PG + + K+PK++
Sbjct: 735 DSRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEKKAKKPKHS 779
>gb|AAV66060.1| alcohol dehydrogenase [Carex albicans var. albicans]
gi|55818442|gb|AAV66054.1| alcohol dehydrogenase [Carex
deflexa var. deflexa] gi|55818434|gb|AAV66050.1| alcohol
dehydrogenase [Carex pensylvanica]
gi|55818432|gb|AAV66049.1| alcohol dehydrogenase [Carex
communis var. communis]
Length = 156
Score = 31.2 bits (69), Expect = 6.5
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 33 VKPTTEAP-------------GMNGAVEV-KRPKNASVSVFEFGSVAASNDKVTLAGYCP 78
VK +TEAP G+ + V K PK +SV++F G+V + + LAG
Sbjct: 54 VKISTEAPLDKVCILSCGISTGLGATLNVAKPPKGSSVAIFGLGAVGLAAEGARLAGASR 113
Query: 79 -VSEDLEPCRWEILPAVESNAPQF 101
+ DL P R+E PA + +F
Sbjct: 114 IIGVDLNPDRFE--PARKFGCTEF 135
>gb|AAV66059.1| alcohol dehydrogenase [Carex brainerdii] gi|55818450|gb|AAV66058.1|
alcohol dehydrogenase [Carex deflexa var. boottii]
gi|55818446|gb|AAV66056.1| alcohol dehydrogenase [Carex
rossii] gi|55818444|gb|AAV66055.1| alcohol dehydrogenase
[Carex inops subsp. inops] gi|55818428|gb|AAV66047.1|
alcohol dehydrogenase [Carex rossii]
gi|55818424|gb|AAV66045.1| alcohol dehydrogenase [Carex
globosa] gi|55818422|gb|AAV66044.1| alcohol
dehydrogenase [Carex serpenticola]
gi|55818412|gb|AAV66039.1| alcohol dehydrogenase [Carex
rossii]
Length = 156
Score = 31.2 bits (69), Expect = 6.5
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 33 VKPTTEAP-------------GMNGAVEV-KRPKNASVSVFEFGSVAASNDKVTLAGYCP 78
VK +TEAP G+ + V K PK +SV++F G+V + + LAG
Sbjct: 54 VKISTEAPLDKVCILSCGISTGLGATLNVAKPPKGSSVAIFGLGAVGLAAEGARLAGASR 113
Query: 79 -VSEDLEPCRWEILPAVESNAPQF 101
+ DL P R+E PA + +F
Sbjct: 114 IIGVDLNPDRFE--PARKFGCTEF 135
>gb|AAV66052.1| alcohol dehydrogenase [Carex tonsa var. rugosperma]
Length = 156
Score = 31.2 bits (69), Expect = 6.5
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 33 VKPTTEAP-------------GMNGAVEV-KRPKNASVSVFEFGSVAASNDKVTLAGYCP 78
VK +TEAP G+ + V K PK +SV++F G+V + + LAG
Sbjct: 54 VKISTEAPLDKVCILSCGISTGLGATLNVAKPPKGSSVAIFGLGAVGLAAEGARLAGASR 113
Query: 79 -VSEDLEPCRWEILPAVESNAPQF 101
+ DL P R+E PA + +F
Sbjct: 114 IIGVDLNPDRFE--PARKFGCTEF 135
>gb|AAV66046.1| alcohol dehydrogenase [Carex globosa]
Length = 156
Score = 31.2 bits (69), Expect = 6.5
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 33 VKPTTEAP-------------GMNGAVEV-KRPKNASVSVFEFGSVAASNDKVTLAGYCP 78
VK +TEAP G+ + V K PK +SV++F G+V + + LAG
Sbjct: 54 VKISTEAPLDKVCILSCGISTGLGATLNVAKPPKGSSVAIFGLGAVGLAAEGARLAGASR 113
Query: 79 -VSEDLEPCRWEILPAVESNAPQF 101
+ DL P R+E PA + +F
Sbjct: 114 IIGVDLNPDRFE--PARKFGCTEF 135
>emb|CAH01652.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
gi|50305681|ref|XP_452801.1| unnamed protein product
[Kluyveromyces lactis]
Length = 907
Score = 31.2 bits (69), Expect = 6.5
Identities = 19/54 (35%), Positives = 26/54 (47%), Gaps = 1/54 (1%)
Query: 11 NSQPEAKLSTTENAAKNGGASAVKPTTEAPGMNGAV-EVKRPKNASVSVFEFGS 63
N QP A +T + AKN ++AVKP A+ PK A+ F FG+
Sbjct: 603 NQQPSADNATEKQEAKNAVSTAVKPAFSFGSTPAALPSDTTPKEAAAPSFSFGT 656
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.127 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,049,441
Number of Sequences: 2540612
Number of extensions: 6569825
Number of successful extensions: 15357
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 15347
Number of HSP's gapped (non-prelim): 26
length of query: 105
length of database: 863,360,394
effective HSP length: 81
effective length of query: 24
effective length of database: 657,570,822
effective search space: 15781699728
effective search space used: 15781699728
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC144516.12