BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144513.3 - phase: 0 /pseudo
(1115 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO50698.1| unknown protein [Arabidopsis thaliana] gi|2839328... 1099 0.0
dbj|BAA95777.1| unnamed protein product [Arabidopsis thaliana] 1048 0.0
ref|NP_188306.2| WD-40 repeat family protein [Arabidopsis thaliana] 1048 0.0
dbj|BAD81067.1| putative CTV.2 [Oryza sativa (japonica cultivar-... 1025 0.0
gb|AAP45184.1| putative beta transducin-like protein [Solanum bu... 949 0.0
gb|AAN13188.1| unknown protein [Arabidopsis thaliana] gi|1502812... 925 0.0
ref|XP_480212.1| WD-40 repeat protein-like [Oryza sativa (japoni... 924 0.0
ref|NP_178164.2| WD-40 repeat family protein [Arabidopsis thalia... 921 0.0
gb|AAN62336.1| CTV.2 [Poncirus trifoliata] 919 0.0
pir||G86291 F7H2.9 protein - Arabidopsis thaliana gi|8927654|gb|... 903 0.0
ref|NP_188209.2| WD-40 repeat family protein [Arabidopsis thaliana] 902 0.0
ref|NP_851003.1| WD-40 repeat family protein [Arabidopsis thaliana] 902 0.0
dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana] 880 0.0
gb|AAD48936.1| contains similarity to Pfam family PF0040 - WD do... 485 e-135
pir||G96836 unknown protein T21F11.18 [imported] - Arabidopsis t... 421 e-116
ref|NP_912774.1| unnamed protein product [Oryza sativa (japonica... 399 e-109
gb|AAV50007.1| WD-40 repeat protein [Malus x domestica] 271 7e-71
gb|AAD20702.2| hypothetical protein [Arabidopsis thaliana] 99 8e-19
ref|NP_565594.2| transducin family protein / WD-40 repeat family... 99 8e-19
pir||B84648 hypothetical protein At2g25420 [imported] - Arabidop... 92 1e-16
>gb|AAO50698.1| unknown protein [Arabidopsis thaliana] gi|28393287|gb|AAO42071.1|
unknown protein [Arabidopsis thaliana]
gi|42568094|ref|NP_198055.3| WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 1108
Score = 1099 bits (2842), Expect = 0.0
Identities = 540/688 (78%), Positives = 604/688 (87%), Gaps = 5/688 (0%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFLEEEKFKESVH+LEKESGFFFN KYF+EKV AGEW++VE YLSGF
Sbjct: 1 MSSLSRELVFLILQFLEEEKFKESVHRLEKESGFFFNTKYFDEKVLAGEWDDVETYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDRQ+K KAVEILV DL+VFSTFNEELYKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQEKAKAVEILVQDLRVFSTFNEELYKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTKTARGIML ELKKLIEANPLFRDKL+FPTL+SSRLRTLINQSLN
Sbjct: 121 LQNFRENEQLSKYGDTKTARGIMLGELKKLIEANPLFRDKLMFPTLRSSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLF DH+CT NGPLAP+ VN PV + KPAAY SLG H PF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFTDHTCTLPNGPLAPSAVNQPVTTLTKPAAYPSLG--PHVPF 238
Query: 241 PPAAATANANALAGWMANASVSSSVQAAVVTASTIPVPHNQVSILKRPITPSTTPGMVEY 300
PP A ANA ALA WMA AS +S+VQAAVVT + +P P NQ+SILKRP TP TPG+V+Y
Sbjct: 239 PPGPAAANAGALASWMAAASGASAVQAAVVTPALMPQPQNQMSILKRPRTPPATPGIVDY 298
Query: 301 QSADHEQLMKRLRPAPSVEEVSYPSARQ-ASWSLDDLPRTVAMSLHQGSSVTSMDFHPSH 359
Q+ DHE LMKRLRPAPSVEEV+YP+ RQ A WSL+DLP A++LHQGS+VTSM+F+P
Sbjct: 299 QNPDHE-LMKRLRPAPSVEEVTYPAPRQQAPWSLEDLPTKAALALHQGSTVTSMEFYPMQ 357
Query: 360 QTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKDTP-SVSRVTWSL 418
TLLLVGS GEI+LWEL RERLVS+PFKIWD+S CS FQA + K+TP SV+RV WS
Sbjct: 358 NTLLLVGSATGEITLWELAARERLVSRPFKIWDMSNCSHQFQALIAKETPISVTRVAWSP 417
Query: 419 DGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKL 478
DG+F+GVAFTKHLI +YA++G N+L Q EIDAH+G VNDLAFA+PN+QLCV+TCGDDKL
Sbjct: 418 DGNFIGVAFTKHLIQLYAFSGPNDLRQHTEIDAHVGAVNDLAFANPNRQLCVITCGDDKL 477
Query: 479 IKVWDLTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDA 538
IKVWD++GR+ F FEGH+APVYSICPH+KENIQFIFSTA+DGKIKAWLYDN+GSRVDYDA
Sbjct: 478 IKVWDVSGRKHFTFEGHDAPVYSICPHYKENIQFIFSTAIDGKIKAWLYDNLGSRVDYDA 537
Query: 539 PGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTT 598
PG WCT MLYSADGTRLFSCGTSKDGDSFLVEWNESEG+IKRTY F+KK AGVVQFDT+
Sbjct: 538 PGKWCTRMLYSADGTRLFSCGTSKDGDSFLVEWNESEGSIKRTYKEFQKKLAGVVQFDTS 597
Query: 599 QNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNGFKIL 658
+N FLA GED QIKFWDM+N+N LTST+AEGGL LPHLRFNK+GNLLAVTTADNGFKIL
Sbjct: 598 KNHFLAVGEDGQIKFWDMNNINVLTSTDAEGGLPALPHLRFNKDGNLLAVTTADNGFKIL 657
Query: 659 ANAGGLRSLRTVETPAFEALRSPIESAA 686
AN G RSLR +ETPA E +R+P++ A
Sbjct: 658 ANPAGFRSLRAMETPASETMRTPVDFKA 685
>dbj|BAA95777.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 1048 bits (2709), Expect = 0.0
Identities = 518/685 (75%), Positives = 590/685 (85%), Gaps = 4/685 (0%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKESVHKLE+ESGFFFN+KYFEEK AGEW+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDR D+ KAVEIL DLKVF+TFNEELYKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IM ELKKLIEANPLFR+KL FP+ K+SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLF+DHSC+PSNG A TPVNLPVAAVA+P+ + LGV GPF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFLDHSCSPSNGARALTPVNLPVAAVARPSNFVPLGVHG-GPF 239
Query: 241 PPAAATA-NANALAGWMANASVSSSVQAAVVTASTIPVPHNQVSILKRPITPSTTPGMVE 299
A A NANALAGWMAN + SSSV + VV AS P+ +QV+ LK P PS + G+++
Sbjct: 240 QSNPAPAPNANALAGWMANPNPSSSVPSGVVAASPFPMQPSQVNELKHPRAPSNSLGLMD 299
Query: 300 YQSADHEQLMKRLRPAPSVEEVSYPSARQASWSLDDLPRTVAMSLHQGSSVTSMDFHPSH 359
YQSADHEQLMKRLR A + EV+YP+ SLDDLPR V ++ QGS V SMDFHPSH
Sbjct: 300 YQSADHEQLMKRLRSAQTSNEVTYPAHSHPPASLDDLPRNVVSTIRQGSVVISMDFHPSH 359
Query: 360 QTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKDTP-SVSRVTWSL 418
TLL VG ++GE++LWE+G RE++V++PFKIW+++ACS+ FQ ++VK+ SV+RV WS
Sbjct: 360 HTLLAVGCSSGEVTLWEVGSREKVVTEPFKIWNMAACSVIFQGSIVKEPSISVTRVAWSP 419
Query: 419 DGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKL 478
DG+ +GV+FTKHLIH+YAY GS +L Q +EIDAH+G VNDLAFAHPNKQ+CVVTCGDDKL
Sbjct: 420 DGNLLGVSFTKHLIHVYAYQGS-DLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKL 478
Query: 479 IKVWDLTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDA 538
IKVWDL+G++LF FEGHEAPVYSICPH KENIQFIFSTA+DGKIKAWLYDN+GSRVDYDA
Sbjct: 479 IKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYDNVGSRVDYDA 538
Query: 539 PGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTT 598
PG WCTTMLYSADG+RLFSCGTSK+GDSFLVEWNESEGA+KRTY GFRKKSAGVVQFDTT
Sbjct: 539 PGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKSAGVVQFDTT 598
Query: 599 QNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNGFKIL 658
+NRFLA GED+QIKFW+MDN N LT EAEGGL LP LRFNK+GNLLAVTTADNGFKIL
Sbjct: 599 RNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNLPRLRFNKDGNLLAVTTADNGFKIL 658
Query: 659 ANAGGLRSLRTVETPAFEALRSPIE 683
AN GLR+LR E +FEA ++ I+
Sbjct: 659 ANTDGLRTLRAFEARSFEASKASID 683
>ref|NP_188306.2| WD-40 repeat family protein [Arabidopsis thaliana]
Length = 1131
Score = 1048 bits (2709), Expect = 0.0
Identities = 518/685 (75%), Positives = 590/685 (85%), Gaps = 4/685 (0%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKESVHKLE+ESGFFFN+KYFEEK AGEW+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDR D+ KAVEIL DLKVF+TFNEELYKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IM ELKKLIEANPLFR+KL FP+ K+SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLF+DHSC+PSNG A TPVNLPVAAVA+P+ + LGV GPF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFLDHSCSPSNGARALTPVNLPVAAVARPSNFVPLGVHG-GPF 239
Query: 241 PPAAATA-NANALAGWMANASVSSSVQAAVVTASTIPVPHNQVSILKRPITPSTTPGMVE 299
A A NANALAGWMAN + SSSV + VV AS P+ +QV+ LK P PS + G+++
Sbjct: 240 QSNPAPAPNANALAGWMANPNPSSSVPSGVVAASPFPMQPSQVNELKHPRAPSNSLGLMD 299
Query: 300 YQSADHEQLMKRLRPAPSVEEVSYPSARQASWSLDDLPRTVAMSLHQGSSVTSMDFHPSH 359
YQSADHEQLMKRLR A + EV+YP+ SLDDLPR V ++ QGS V SMDFHPSH
Sbjct: 300 YQSADHEQLMKRLRSAQTSNEVTYPAHSHPPASLDDLPRNVVSTIRQGSVVISMDFHPSH 359
Query: 360 QTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKDTP-SVSRVTWSL 418
TLL VG ++GE++LWE+G RE++V++PFKIW+++ACS+ FQ ++VK+ SV+RV WS
Sbjct: 360 HTLLAVGCSSGEVTLWEVGSREKVVTEPFKIWNMAACSVIFQGSIVKEPSISVTRVAWSP 419
Query: 419 DGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKL 478
DG+ +GV+FTKHLIH+YAY GS +L Q +EIDAH+G VNDLAFAHPNKQ+CVVTCGDDKL
Sbjct: 420 DGNLLGVSFTKHLIHVYAYQGS-DLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKL 478
Query: 479 IKVWDLTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDA 538
IKVWDL+G++LF FEGHEAPVYSICPH KENIQFIFSTA+DGKIKAWLYDN+GSRVDYDA
Sbjct: 479 IKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYDNVGSRVDYDA 538
Query: 539 PGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTT 598
PG WCTTMLYSADG+RLFSCGTSK+GDSFLVEWNESEGA+KRTY GFRKKSAGVVQFDTT
Sbjct: 539 PGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKSAGVVQFDTT 598
Query: 599 QNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNGFKIL 658
+NRFLA GED+QIKFW+MDN N LT EAEGGL LP LRFNK+GNLLAVTTADNGFKIL
Sbjct: 599 RNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNLPRLRFNKDGNLLAVTTADNGFKIL 658
Query: 659 ANAGGLRSLRTVETPAFEALRSPIE 683
AN GLR+LR E +FEA ++ I+
Sbjct: 659 ANTDGLRTLRAFEARSFEASKASID 683
>dbj|BAD81067.1| putative CTV.2 [Oryza sativa (japonica cultivar-group)]
Length = 1129
Score = 1025 bits (2651), Expect = 0.0
Identities = 524/703 (74%), Positives = 594/703 (83%), Gaps = 21/703 (2%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYFEEKV AGEW+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEEKVHAGEWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDR D+ KAV+ILV DLKVFSTFNEELYKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVDILVKDLKVFSTFNEELYKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IML+ELKKLIEANPLFR+KLVFPTLK+SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARSIMLIELKKLIEANPLFREKLVFPTLKASRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLF DH+CTP NG A +PV++P+AAV K A T + AH PF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFTDHTCTPPNGARA-SPVSVPLAAVPK-AGGTYPPLTAHTPF 238
Query: 241 PPAAATANANALAGWMANASVS-SSVQAAVVTASTIPVPHNQ-VSILKRPITPSTTPGMV 298
P A +LAGWMANA+ + SSV +AVV AS++PVP NQ V I+KRP +
Sbjct: 239 QPPPA---GPSLAGWMANAAAATSSVPSAVVAASSLPVPPNQAVPIMKRPT-------IT 288
Query: 299 EYQSADHEQLMKRLRPAP-SVEEVSYPSA-RQASWSLDDLPRTVAMSLHQGSSVTSMDFH 356
+YQSA+ EQLMKRLRP+ V+E +YP+ Q WS++DLPRTVA +L QGSSVTSMDFH
Sbjct: 289 DYQSAESEQLMKRLRPSGHGVDEATYPAPIPQPLWSVEDLPRTVACTLSQGSSVTSMDFH 348
Query: 357 PSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKDTPSVSRVTW 416
P+ TLLLVGS NGEI+LWE+GMRERL SKPFKIWDI ACS FQ+ + + S++RVTW
Sbjct: 349 PTRHTLLLVGSTNGEITLWEVGMRERLFSKPFKIWDIQACSPQFQSVAKESSISINRVTW 408
Query: 417 SLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDD 476
S DG +GVAF KHLIH++AY NE Q +EIDAH G VND+AF+ PNKQLCVVTCGDD
Sbjct: 409 SPDGDLIGVAFAKHLIHLHAYQQPNETRQVLEIDAHSGAVNDIAFSRPNKQLCVVTCGDD 468
Query: 477 KLIKVWDLTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDY 536
+LIKVWD+ G++LF+FEGHEAPVYSICPHHKE+IQFIFST++DGKIKAWLYD+MGSRVDY
Sbjct: 469 RLIKVWDMHGQKLFSFEGHEAPVYSICPHHKESIQFIFSTSLDGKIKAWLYDHMGSRVDY 528
Query: 537 DAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSA--GVVQ 594
DAPG WCTTMLYSADGTRLFSCGTSKDGDS+LVEWNESEG+IKRTY+GFRKKSA GVVQ
Sbjct: 529 DAPGKWCTTMLYSADGTRLFSCGTSKDGDSYLVEWNESEGSIKRTYSGFRKKSAGVGVVQ 588
Query: 595 FDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNG 654
FDT QN LAAGED+QIKFWD+DN L+STEA+GGL GLP LRFNKEGNLLAVTT DNG
Sbjct: 589 FDTAQNHILAAGEDNQIKFWDVDNTTMLSSTEADGGLPGLPRLRFNKEGNLLAVTTVDNG 648
Query: 655 FKILANAGGLRSLRTVETPAFEALRSPIESAANKAVKWKGAPL 697
FKILANA GLR+LR FEA RS E++ ++K GAP+
Sbjct: 649 FKILANADGLRTLRAFGNRPFEAFRSQYEAS---SMKVSGAPV 688
>gb|AAP45184.1| putative beta transducin-like protein [Solanum bulbocastanum]
Length = 1078
Score = 949 bits (2454), Expect = 0.0
Identities = 473/685 (69%), Positives = 559/685 (81%), Gaps = 10/685 (1%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYF+E+VQAGEW+EVE+YL GF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFDEQVQAGEWDEVERYLGGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKV+DNRYSMKIFFEIRKQKYLEALD+ D+ KAVEILV DLKVF++FNE+L+KEITQLLT
Sbjct: 61 TKVEDNRYSMKIFFEIRKQKYLEALDKHDRVKAVEILVKDLKVFASFNEDLFKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFR+NEQLSKYGDTK+AR IML+ELKKLIEANPLFRDKL FP+ K+SRLRTLINQSLN
Sbjct: 121 LDNFRQNEQLSKYGDTKSARNIMLVELKKLIEANPLFRDKLAFPSFKASRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAA-VAKPAAYTSLGVGAHGP 239
WQHQLCKNPRPNPDIKTLF DH+C+ SNG P P N P+A V KP A+ L GAH P
Sbjct: 181 WQHQLCKNPRPNPDIKTLFTDHTCSSSNGTRPPPPGNTPLAGPVPKPGAFPPL--GAHSP 238
Query: 240 FPPAAATANANALAGWMANASVSSSVQAAVVTASTIPVPHNQVSILKRPITPSTTPGMVE 299
F P + + +A+AGWM++A+ S S A + LK P PGM +
Sbjct: 239 FQP-VVSPSPSAIAGWMSSANPSMSHTAVAPGPPGLVQAPGAAGFLKHPRANPGGPGM-D 296
Query: 300 YQSADHEQLMKRLRPAPSVEEVSYPSARQA--SWSLDDLPRTVAMSLHQGSSVTSMDFHP 357
+Q A+ E LMKR+R S +EVS+ + +S DDLP+TV +L QGS+V SMDFHP
Sbjct: 297 FQMAESEHLMKRMRAGQS-DEVSFSGSTHPPNMYSPDDLPKTVVRNLSQGSNVMSMDFHP 355
Query: 358 SHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKD-TPSVSRVTW 416
QT+LLVG+N G+IS+WE+G RERL K FK+WDISACS+PFQ+A+VKD T SV+R W
Sbjct: 356 QQQTVLLVGTNVGDISIWEVGSRERLAHKSFKVWDISACSMPFQSALVKDATVSVNRCVW 415
Query: 417 SLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDD 476
DGS +GVAF+KH++ IY Y+ + EL Q +EIDAH GGVND+AF+HPNKQLCVVTCGDD
Sbjct: 416 GPDGSILGVAFSKHIVQIYTYSPAGELRQHLEIDAHAGGVNDIAFSHPNKQLCVVTCGDD 475
Query: 477 KLIKVWD-LTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVD 535
K IKVWD ++GRR FEGHEAPVYS+CPH+KE+IQFIFSTA+DGKIKAWLYD MGSRVD
Sbjct: 476 KTIKVWDAVSGRRQHMFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDGMGSRVD 535
Query: 536 YDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQF 595
YDAPGHWCTTM YSADGTRLFSCGTSK+G+S LVEWNESEGAIKRT++GFRK+S GVVQF
Sbjct: 536 YDAPGHWCTTMAYSADGTRLFSCGTSKEGESHLVEWNESEGAIKRTFSGFRKRSLGVVQF 595
Query: 596 DTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNGF 655
DTT+NRFLAAG++ QIKFW+MDN N LT+T+ +GGL P LRFNKEG+LLAVTT+DNG
Sbjct: 596 DTTRNRFLAAGDEFQIKFWEMDNTNMLTATDGDGGLPASPRLRFNKEGSLLAVTTSDNGI 655
Query: 656 KILANAGGLRSLRTVETPAFEALRS 680
K+LAN G R LR +E+ AFE R+
Sbjct: 656 KVLANTDGQRMLRMLESRAFEGSRA 680
>gb|AAN13188.1| unknown protein [Arabidopsis thaliana] gi|15028127|gb|AAK76687.1|
unknown protein [Arabidopsis thaliana]
gi|18394279|ref|NP_563981.1| WD-40 repeat family protein
[Arabidopsis thaliana] gi|30684518|ref|NP_849672.1|
WD-40 repeat family protein [Arabidopsis thaliana]
Length = 1131
Score = 925 bits (2391), Expect = 0.0
Identities = 471/706 (66%), Positives = 552/706 (77%), Gaps = 24/706 (3%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYFE++V G W+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD+ D+PKAV+ILV DLKVFSTFNEEL+KEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IML+ELKKLIEANPLFRDKL FPTL++SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLP-VAAVAKPAAYTSLGVGAHGP 239
WQHQLCKNPRPNPDIKTLF+DHSC P NG AP+PVN P + + K + L GAHGP
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCGPPNGARAPSPVNNPLLGGIPKAGGFPPL--GAHGP 238
Query: 240 FPPAAATANANALAGWMANASVSSSVQAAVVTASTIPVPHNQV-SILKRPITPSTTPGMV 298
F P A+ LAGWM S SSV V+A I + + + LK P TP T +
Sbjct: 239 FQPTASPV-PTPLAGWM---SSPSSVPHPAVSAGAIALGGPSIPAALKHPRTPPTNASL- 293
Query: 299 EYQSADHEQLMKRLRPAPSVEEVSY-------------PSARQASWSLDDLPRTVAMSLH 345
+Y SAD E + KR RP +EV+ A + DDLP+TVA +L
Sbjct: 294 DYPSADSEHVSKRTRPMGISDEVNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLS 353
Query: 346 QGSSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVV 405
QGSS SMDFHP QTLLLVG+N G+I LWE+G RERLV K FK+WD+S CS+P QAA+V
Sbjct: 354 QGSSPMSMDFHPIKQTLLLVGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALV 413
Query: 406 KD-TPSVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHP 464
K+ SV+RV WS DGS GVA+++H++ +Y+Y+G ++ Q +EIDAH+GGVND++F+ P
Sbjct: 414 KEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTP 473
Query: 465 NKQLCVVTCGDDKLIKVWD-LTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIK 523
NKQLCV+TCGDDK IKVWD TG + FEGHEAPVYS+CPH+KENIQFIFSTA+DGKIK
Sbjct: 474 NKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIK 533
Query: 524 AWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYN 583
AWLYDNMGSRVDYDAPG WCTTM YSADGTRLFSCGTSKDG+SF+VEWNESEGA+KRTY
Sbjct: 534 AWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQ 593
Query: 584 GFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEG 643
GF K+S GVVQFDTT+NR+LAAG+D IKFWDMD V LT+ + +GGLQ P +RFNKEG
Sbjct: 594 GFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEG 653
Query: 644 NLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIESAANKA 689
+LLAV+ +N KI+AN+ GLR L T E + E+ + I S A A
Sbjct: 654 SLLAVSGNENVIKIMANSDGLRLLHTFENISSESSKPAINSIAAAA 699
>ref|XP_480212.1| WD-40 repeat protein-like [Oryza sativa (japonica cultivar-group)]
gi|37806272|dbj|BAC99788.1| WD-40 repeat protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 1150
Score = 924 bits (2388), Expect = 0.0
Identities = 467/711 (65%), Positives = 555/711 (77%), Gaps = 28/711 (3%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ES F+FNMK+FE+ VQ GEW+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKV+DNRYSMKIFFEIRKQKYLEALDR D+ KAVEILV DLKVF++FNEEL+KEITQLLT
Sbjct: 61 TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQS-- 178
L NFR+NEQLSKYGDTK+AR IML+ELKKLIEANPLFRDKL FP K SRLRTLINQ
Sbjct: 121 LENFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVSRLRTLINQRDV 180
Query: 179 ---------------LNWQHQLCKNPRPNPDIKTLFIDHSCT-PSNGPLAPTPVNLP-VA 221
LNWQHQLCKNPRPNPDIKTLF DHSC P+NG AP P N P V
Sbjct: 181 ICMNNNVNIQIGNAPLNWQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPANGPLVG 240
Query: 222 AVAKPAAYTSLGVGAHGPFPPAAATANANALAGWMANASVSSSVQAAVVTASTIPVPHNQ 281
+ K AA+ +G AH PF P + + NA+AGWM NA+ S A + P N
Sbjct: 241 PIPKSAAFPPMG--AHAPFQPVVSPS-PNAIAGWMTNANPSLPHAAVAQGPPGLVQPPNT 297
Query: 282 VSILKRPITPSTTPGMVEYQSADHEQLMKRLRPAPSVEEVSYPSARQAS--WSLDDLPRT 339
+ LK P TP++ P ++YQSAD E LMKR+R +EVS+ A + ++ DDLP+
Sbjct: 298 AAFLKHPRTPTSAPA-IDYQSADSEHLMKRMRVGQP-DEVSFSGASHPANIYTQDDLPKQ 355
Query: 340 VAMSLHQGSSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLP 399
V +L+QGS+V S+DFHP QT+LLVG+N G+I +WE+G RER+ K FK+WDIS+C+LP
Sbjct: 356 VVRNLNQGSNVMSLDFHPVQQTILLVGTNVGDIGIWEVGSRERIAHKTFKVWDISSCTLP 415
Query: 400 FQAAVVKDTP-SVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVND 458
QAA++KD SV+R WS DGS +GVAF+KH++ YA+ + EL Q+ EIDAHIGGVND
Sbjct: 416 LQAALMKDAAISVNRCLWSPDGSILGVAFSKHIVQTYAFVLNGELRQQAEIDAHIGGVND 475
Query: 459 LAFAHPNKQLCVVTCGDDKLIKVWDL-TGRRLFNFEGHEAPVYSICPHHKENIQFIFSTA 517
+AF+HPNK L ++TCGDDKLIKVWD TG++ + FEGHEAPVYS+CPH+KE+IQFIFSTA
Sbjct: 476 IAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTA 535
Query: 518 VDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGA 577
+DGKIKAWLYD +GSRVDYDAPGHWCTTM YSADGTRLFSCGTSKDGDS LVEWNE+EGA
Sbjct: 536 IDGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGA 595
Query: 578 IKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHL 637
IKRTYNGFRK+S GVVQFDTT+NRFLAAG++ +KFWDMDN N LT+T+ +GGL P L
Sbjct: 596 IKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRL 655
Query: 638 RFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIESAANK 688
RFN+EG+LLAVT +NG KILAN G R LR +E+ A+E R P + K
Sbjct: 656 RFNREGSLLAVTANENGIKILANTDGQRLLRMLESRAYEGSRGPPQQINTK 706
>ref|NP_178164.2| WD-40 repeat family protein [Arabidopsis thaliana]
gi|42570257|ref|NP_849913.2| WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 1120
Score = 921 bits (2380), Expect = 0.0
Identities = 468/700 (66%), Positives = 549/700 (77%), Gaps = 22/700 (3%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYFE++V G W+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDR D+PKAV+ILV DLKVFSTFNEEL+KEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IML+ELKKLIEANPLFRDKL FPTL++SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLF+DHSC N AP+PVN P+ + P A +GAHGPF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCRLPNDARAPSPVNNPLLG-SLPKAEGFPPLGAHGPF 239
Query: 241 PPAAATANANALAGWMANASVSSSVQAAVVTASTIPVPHNQV-SILKRPITPSTTPGMVE 299
P + LAGWM S SSV V+ I + + + LK P TP + V+
Sbjct: 240 QPTPSPV-PTPLAGWM---SSPSSVPHPAVSGGPIALGAPSIQAALKHPRTPPSN-SAVD 294
Query: 300 YQSADHEQLMKRLRPAPSVEEVS---------YPSA----RQASWSLDDLPRTVAMSLHQ 346
Y S D + + KR RP +EVS +P Q + DDLP+TVA +L Q
Sbjct: 295 YPSGDSDHVSKRTRPMGISDEVSLGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQ 354
Query: 347 GSSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVK 406
GSS SMDFHP QTLLLVG+N G+I LWE+G RERLV K FK+WD+S CS+P QAA+VK
Sbjct: 355 GSSPMSMDFHPIKQTLLLVGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVK 414
Query: 407 D-TPSVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPN 465
+ SV+RV WS DGS GVA+++H++ +Y+Y+G ++ Q +EIDAH+GGVND+AF+ PN
Sbjct: 415 EPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPN 474
Query: 466 KQLCVVTCGDDKLIKVWD-LTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKA 524
KQLCV TCGDDK IKVWD TG + + FEGHEAPVYSICPH+KENIQFIFSTA+DGKIKA
Sbjct: 475 KQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKA 534
Query: 525 WLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNG 584
WLYDNMGSRVDY+APG WCTTM YSADGTRLFSCGTSKDG+SF+VEWNESEGA+KRTY G
Sbjct: 535 WLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQG 594
Query: 585 FRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGN 644
F K+S GVVQFDTT+NR+LAAG+D IKFWDMD + LT+ +A+GGLQ P +RFNKEG+
Sbjct: 595 FHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGS 654
Query: 645 LLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIES 684
LLAV+ DN K++AN+ GLR L TVE + E+ + I S
Sbjct: 655 LLAVSANDNMIKVMANSDGLRLLHTVENLSSESSKPAINS 694
>gb|AAN62336.1| CTV.2 [Poncirus trifoliata]
Length = 1127
Score = 919 bits (2375), Expect = 0.0
Identities = 469/718 (65%), Positives = 551/718 (76%), Gaps = 38/718 (5%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYFE++V G W++VEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDDVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD+ D+ KAVEILV DLKVFSTFNEEL+KEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IML+ELKKLIEANPLFRDKL FP LK N SLN
Sbjct: 121 LENFRENEQLSKYGDTKSARSIMLVELKKLIEANPLFRDKLQFPNLK--------NSSLN 172
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLF+DH+C NG AP+P N P+ + P A +GAHGPF
Sbjct: 173 WQHQLCKNPRPNPDIKTLFVDHTCGQPNGARAPSPANNPLLG-SLPKAGVFPPLGAHGPF 231
Query: 241 PPAAATANANALAGWMANASVSS--SVQAAVVTASTIPVPHNQVSILKRPITPSTTPGMV 298
P A LAGWM+N + +V + + +P + LK P TP T P V
Sbjct: 232 QPTPAPV-PTPLAGWMSNPPTVTHPAVSGGAIGLGSPSIP---AAALKHPRTPPTNPS-V 286
Query: 299 EYQSADHEQLMKRLRPAPSVEEVSYP-----------SARQASWSLDDLPRTVAMSLHQG 347
+Y S D + L KR RP +E++ P S QA + +DLP+TV +L+QG
Sbjct: 287 DYPSGDSDHLSKRTRPIGISDEINLPVNVLPVSFTGHSHSQAFSAPEDLPKTVTRTLNQG 346
Query: 348 SSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKD 407
SS SMDFHP QTLLLVG+N G+I LWE+G RERLV + FK+WD+ ACS+P QAA+VKD
Sbjct: 347 SSPMSMDFHPVQQTLLLVGTNVGDIGLWEVGSRERLVLRNFKVWDLGACSMPLQAALVKD 406
Query: 408 TP-SVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNK 466
SV+RV WS DGS GVA+++H++ IY+Y+G +E+ Q +EIDAH+GGVND+AF+HPNK
Sbjct: 407 PGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNK 466
Query: 467 QLCVVTCGDDKLIKVWDLT-GRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAW 525
QLCV+TCGDDK IKVWD T G + + FEGHEAPVYS+CPHHKENIQFIFSTA+DGKIKAW
Sbjct: 467 QLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
Query: 526 LYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGF 585
LYDN+GSRVDY+APG WCTTM YSADGTRLFSCGTSKDG+SF+VEWNESEGA+KRTY GF
Sbjct: 527 LYDNLGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGF 586
Query: 586 RKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNL 645
RK+S GVVQFDTT+NRFLAAG+D IKFWDMD+V LTS +A+GGL P +RFNK+G L
Sbjct: 587 RKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCL 646
Query: 646 LAVTTADNGFKILANAGGLRSLRTVETPAFEALR---------SPIESAANKAVKWKG 694
LAV+T DNG KILA + G+R LRT E A++A R SPI +AA A G
Sbjct: 647 LAVSTNDNGIKILATSDGIRLLRTFENLAYDASRTSENSKPTISPISAAAAAAATSAG 704
>pir||G86291 F7H2.9 protein - Arabidopsis thaliana gi|8927654|gb|AAF82145.1|
Strong similarity to an unknown protein T21F11.18
gi|6730738 from Arabidopsis thaliana BAC T21F11
gb|AC018849 and contains multiple WD PF|00400 domains.
ESTs gb|Z34157, gb|AA006273, gb|AA605431, gb|W43588,
gb|W43605, gb|Z34559, gb|R90037, gb|AI994125 come from
this gene
Length = 1153
Score = 903 bits (2334), Expect = 0.0
Identities = 467/725 (64%), Positives = 550/725 (75%), Gaps = 40/725 (5%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYFE++V G W+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD+ D+PKAV+ILV DLKVFSTFNEEL+KEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IML+ELKKLIEANPLFRDKL FPTL++SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLP-VAAVAKPAAYTSLGVGAHGP 239
WQHQLCKNPRPNPDIKTLF+DHSC P NG AP+PVN P + + K + L GAHGP
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCGPPNGARAPSPVNNPLLGGIPKAGGFPPL--GAHGP 238
Query: 240 FPPAAATANANALAGWMANAS----VSSSVQAAVVTASTIP---------------VPHN 280
F P A+ LAGWM++ S + S A + +IP P
Sbjct: 239 FQPTASPV-PTPLAGWMSSPSSVPHPAVSAGAIALGGPSIPDTLCVIYAICLQWNSFPIF 297
Query: 281 QVSILKRPITPSTTPGMVEYQSADHEQLMKRLRPAPSVEEVSY-------------PSAR 327
++ LK P TP T + +Y SAD E + KR RP +EV+
Sbjct: 298 GIAALKHPRTPPTNASL-DYPSADSEHVSKRTRPMGISDEVNLGVNMLPMSFSGQAHGHS 356
Query: 328 QASWSLDDLPRTVAMSLHQGSSVTSMDFHPSHQTLLL-VGSNNGEISLWELGMRERLVSK 386
A + DDLP+TVA +L QGSS SMDFHP QTLLL V +I LWE+G RERLV K
Sbjct: 357 PAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLGVFLALCDIGLWEVGSRERLVQK 416
Query: 387 PFKIWDISACSLPFQAAVVKD-TPSVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQ 445
FK+WD+S CS+P QAA+VK+ SV+RV WS DGS GVA+++H++ +Y+Y+G ++ Q
Sbjct: 417 TFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQ 476
Query: 446 RVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKLIKVWD-LTGRRLFNFEGHEAPVYSICP 504
+EIDAH+GGVND++F+ PNKQLCV+TCGDDK IKVWD TG + FEGHEAPVYS+CP
Sbjct: 477 HLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCP 536
Query: 505 HHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDG 564
H+KENIQFIFSTA+DGKIKAWLYDNMGSRVDYDAPG WCTTM YSADGTRLFSCGTSKDG
Sbjct: 537 HYKENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDG 596
Query: 565 DSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTS 624
+SF+VEWNESEGA+KRTY GF K+S GVVQFDTT+NR+LAAG+D IKFWDMD V LT+
Sbjct: 597 ESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTA 656
Query: 625 TEAEGGLQGLPHLRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIES 684
+ +GGLQ P +RFNKEG+LLAV+ +N KI+AN+ GLR L T E + E+ + I S
Sbjct: 657 IDGDGGLQASPRIRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTFENISSESSKPAINS 716
Query: 685 AANKA 689
A A
Sbjct: 717 IAAAA 721
>ref|NP_188209.2| WD-40 repeat family protein [Arabidopsis thaliana]
Length = 1135
Score = 902 bits (2332), Expect = 0.0
Identities = 459/705 (65%), Positives = 555/705 (78%), Gaps = 26/705 (3%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFK++VH+LEKESGFFFNM+YFE+ V AGEW++VEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKDTVHRLEKESGFFFNMRYFEDSVTAGEWDDVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD++D KAV+ILV +LKVFSTFNEEL+KEIT LLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITMLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
LTNFRENEQLSKYGDTK+ARGIML ELKKLIEANPLFRDKL FP+LK+SRLRTLINQSLN
Sbjct: 121 LTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTP-VNLPVAAVAKPAAYTSLGVGAHGP 239
WQHQLCKNPRPNPDIKTLF+DH+C NG P+P N + +V K + L GAHGP
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHTCGHPNGAHTPSPTTNHLMGSVPKVGGFPPL--GAHGP 238
Query: 240 FPPAAATANANALAGWMANASVSSSVQAAVVTASTIPV--PHNQVSILK--RPITPSTTP 295
F P A +LAGWM N SVQ V+A I + P++ VS+LK RP +P T
Sbjct: 239 FQPTPAPL-TTSLAGWMPN----PSVQHPTVSAGPIGLGAPNSAVSMLKRERPRSPPTNS 293
Query: 296 GMVEYQSADHEQLMKRLRP----------APSVEEVSYP--SARQASWSLDDLPRTVAMS 343
++YQ+AD E ++KR RP +V V+YP S A++S DDLP+ V+
Sbjct: 294 LSMDYQTADSESVLKRPRPFGISDGVNNLPVNVLPVTYPGQSHAHATYSTDDLPKNVSRI 353
Query: 344 LHQGSSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAA 403
L QGS++ SMDFHP QT+LLVG+N G+I++WE+G RE+LVS+ FK+WD++ C++ QA+
Sbjct: 354 LSQGSAIKSMDFHPVQQTMLLVGTNLGDIAIWEVGSREKLVSRSFKVWDLATCTVNLQAS 413
Query: 404 VVKD-TPSVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFA 462
+ + T +V+RV WS DG +GVA++KH++HIY+Y+G +L +EIDAH G VNDLAF+
Sbjct: 414 LASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFS 473
Query: 463 HPNKQLCVVTCGDDKLIKVWD-LTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGK 521
PN+QLCVVTCG+DK IKVWD +TG +L FEGHEAPVYS+CPH KENIQFIFSTAVDGK
Sbjct: 474 QPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGK 533
Query: 522 IKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRT 581
IKAWLYDNMGSRVDYDAPG CT+M Y ADGTRLFSCGTSK+G+SF+VEWNESEGA+KRT
Sbjct: 534 IKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVKRT 593
Query: 582 YNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNK 641
Y G K+S GVVQFDT +N+FL AG++ Q+KFWDMD+V+ L+ST AEGGL P LR NK
Sbjct: 594 YLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAEGGLPSSPCLRINK 653
Query: 642 EGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIESAA 686
EG LLAV+T DNG KILANA G R L ++ ++ R+P S A
Sbjct: 654 EGTLLAVSTTDNGIKILANAEGSRILHSMANRGLDSSRAPPGSVA 698
>ref|NP_851003.1| WD-40 repeat family protein [Arabidopsis thaliana]
Length = 1137
Score = 902 bits (2332), Expect = 0.0
Identities = 459/705 (65%), Positives = 555/705 (78%), Gaps = 26/705 (3%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFK++VH+LEKESGFFFNM+YFE+ V AGEW++VEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKDTVHRLEKESGFFFNMRYFEDSVTAGEWDDVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD++D KAV+ILV +LKVFSTFNEEL+KEIT LLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITMLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
LTNFRENEQLSKYGDTK+ARGIML ELKKLIEANPLFRDKL FP+LK+SRLRTLINQSLN
Sbjct: 121 LTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTP-VNLPVAAVAKPAAYTSLGVGAHGP 239
WQHQLCKNPRPNPDIKTLF+DH+C NG P+P N + +V K + L GAHGP
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHTCGHPNGAHTPSPTTNHLMGSVPKVGGFPPL--GAHGP 238
Query: 240 FPPAAATANANALAGWMANASVSSSVQAAVVTASTIPV--PHNQVSILK--RPITPSTTP 295
F P A +LAGWM N SVQ V+A I + P++ VS+LK RP +P T
Sbjct: 239 FQPTPAPL-TTSLAGWMPN----PSVQHPTVSAGPIGLGAPNSAVSMLKRERPRSPPTNS 293
Query: 296 GMVEYQSADHEQLMKRLRP----------APSVEEVSYP--SARQASWSLDDLPRTVAMS 343
++YQ+AD E ++KR RP +V V+YP S A++S DDLP+ V+
Sbjct: 294 LSMDYQTADSESVLKRPRPFGISDGVNNLPVNVLPVTYPGQSHAHATYSTDDLPKNVSRI 353
Query: 344 LHQGSSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAA 403
L QGS++ SMDFHP QT+LLVG+N G+I++WE+G RE+LVS+ FK+WD++ C++ QA+
Sbjct: 354 LSQGSAIKSMDFHPVQQTMLLVGTNLGDIAIWEVGSREKLVSRSFKVWDLATCTVNLQAS 413
Query: 404 VVKD-TPSVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFA 462
+ + T +V+RV WS DG +GVA++KH++HIY+Y+G +L +EIDAH G VNDLAF+
Sbjct: 414 LASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFS 473
Query: 463 HPNKQLCVVTCGDDKLIKVWD-LTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGK 521
PN+QLCVVTCG+DK IKVWD +TG +L FEGHEAPVYS+CPH KENIQFIFSTAVDGK
Sbjct: 474 QPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGK 533
Query: 522 IKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRT 581
IKAWLYDNMGSRVDYDAPG CT+M Y ADGTRLFSCGTSK+G+SF+VEWNESEGA+KRT
Sbjct: 534 IKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGAVKRT 593
Query: 582 YNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNK 641
Y G K+S GVVQFDT +N+FL AG++ Q+KFWDMD+V+ L+ST AEGGL P LR NK
Sbjct: 594 YLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAEGGLPSSPCLRINK 653
Query: 642 EGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIESAA 686
EG LLAV+T DNG KILANA G R L ++ ++ R+P S A
Sbjct: 654 EGTLLAVSTTDNGIKILANAEGSRILHSMANRGLDSSRAPPGSVA 698
>dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana]
Length = 1128
Score = 880 bits (2275), Expect = 0.0
Identities = 452/705 (64%), Positives = 548/705 (77%), Gaps = 33/705 (4%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFK++VH+LEKESGFFFNM+YFE+ V AGEW++VEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKDTVHRLEKESGFFFNMRYFEDSVTAGEWDDVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD++D KAV+ILV +LKVFSTFNEEL+KEIT LLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITMLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
LTNFRENEQLSKYGDTK+ARGIML ELKKLIEANPLFRDKL FP+LK+SRLRTLINQSLN
Sbjct: 121 LTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTP-VNLPVAAVAKPAAYTSLGVGAHGP 239
WQHQLCKNPRPNPDIKTLF+DH+C NG P+P N + +V K + L GAHGP
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHTCGHPNGAHTPSPTTNHLMGSVPKVGGFPPL--GAHGP 238
Query: 240 FPPAAATANANALAGWMANASVSSSVQAAVVTASTIPV--PHNQVSILK--RPITPSTTP 295
F P A +LAGWM N SVQ V+A I + P++ VS+LK RP +P T
Sbjct: 239 FQPTPAPL-TTSLAGWMPN----PSVQHPTVSAGPIGLGAPNSAVSMLKRERPRSPPTNS 293
Query: 296 GMVEYQSADHEQLMKRLRP----------APSVEEVSYP--SARQASWSLDDLPRTVAMS 343
++YQ+AD E ++KR RP +V V+YP S A++S DDLP+ V+
Sbjct: 294 LSMDYQTADSESVLKRPRPFGISDGVNNLPVNVLPVTYPGQSHAHATYSTDDLPKNVSRI 353
Query: 344 LHQGSSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAA 403
L QGS++ SMDFHP QT+LLVG+N G+I++WE+G RE+LVS+ FK+WD++ C++ QA+
Sbjct: 354 LSQGSAIKSMDFHPVQQTMLLVGTNLGDIAIWEVGSREKLVSRSFKVWDLATCTVNLQAS 413
Query: 404 VVKD-TPSVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFA 462
+ + T +V+RV WS DG +GVA++KH++HIY+Y+G +L +EIDAH G VNDLAF+
Sbjct: 414 LASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFS 473
Query: 463 HPNKQLCVVTCGDDKLIKVWD-LTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGK 521
PN+QLCVVTCG+DK IKVWD +TG +L FEGHEAPVYS+CPH KENIQFIFSTAVDGK
Sbjct: 474 QPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGK 533
Query: 522 IKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRT 581
IKAWLYDNMGSRVDYDAPG CT+M Y AD GTSK+G+SF+VEWNESEGA+KRT
Sbjct: 534 IKAWLYDNMGSRVDYDAPGRSCTSMAYCAD-------GTSKEGESFIVEWNESEGAVKRT 586
Query: 582 YNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNK 641
Y G K+S GVVQFDT +N+FL AG++ Q+KFWDMD+V+ L+ST AEGGL P LR NK
Sbjct: 587 YLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAEGGLPSSPCLRINK 646
Query: 642 EGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIESAA 686
EG LLAV+T DNG KILANA G R L ++ ++ R+P S A
Sbjct: 647 EGTLLAVSTTDNGIKILANAEGSRILHSMANRGLDSSRAPPGSVA 691
>gb|AAD48936.1| contains similarity to Pfam family PF0040 - WD domain, G-beta
repeat; score=10.8, E=3.2, N-2 [Arabidopsis thaliana]
Length = 892
Score = 485 bits (1248), Expect = e-135
Identities = 272/405 (67%), Positives = 294/405 (72%), Gaps = 61/405 (15%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFLEEEKFKESVH+LEKESGFFFN KYF+EKV AGEW++VE YLSGF
Sbjct: 1 MSSLSRELVFLILQFLEEEKFKESVHRLEKESGFFFNTKYFDEKVLAGEWDDVETYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDR-------------QDKPKAVEILVGDLKVFSTF 107
TKVDDNRYSMKIFFEIRKQKYLEALDR Q+K KAVEILV DL+VFSTF
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRFVVLEFDVLCCYRQEKAKAVEILVQDLRVFSTF 120
Query: 108 NEELYKEITQLLTLTNFR---------------------------ENEQLSKYGDTKTAR 140
NEELYKEITQLLTL NFR ENEQLSKYGDTKTAR
Sbjct: 121 NEELYKEITQLLTLQNFRNMRLGLGSVQVEFVMLCRLFLFGCERGENEQLSKYGDTKTAR 180
Query: 141 GIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFI 200
GIML ELKKLIEANPLFRDKL+FPTL+SSRLRTLINQSLNWQHQLCKNPRPNPDIKTLF
Sbjct: 181 GIMLGELKKLIEANPLFRDKLMFPTLRSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFT 240
Query: 201 DHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLG---VGAHGPFPPAAATANANALAGWMA 257
DH+CT NGPLAP+ VN PV + KPAAY SLG V PFPP A ANA ALA WMA
Sbjct: 241 DHTCTLPNGPLAPSAVNQPVTTLTKPAAYPSLGPHVVRNLDPFPPGPAAANAGALASWMA 300
Query: 258 NASVSSSVQAAVVTASTIPVPHNQ------------VSILKRPITPSTTPGMVEYQSADH 305
AS +S+VQAAVVT + +P P NQ VSILKRP TP TPG+V+YQ+ DH
Sbjct: 301 AASGASAVQAAVVTPALMPQPQNQISIKNLLFFFQKVSILKRPRTPPATPGIVDYQNPDH 360
Query: 306 EQLMKRLRPAPSVEEVSYP-----SARQASWSLDDLPRTVAMSLH 345
E LMKRLRPAPSVEE S + +WS D VA + H
Sbjct: 361 E-LMKRLRPAPSVEEALIAKETPISVTRVAWSPDGNFIGVAFTKH 404
Score = 452 bits (1162), Expect = e-125
Identities = 221/329 (67%), Positives = 255/329 (77%), Gaps = 43/329 (13%)
Query: 401 QAAVVKDTP-SVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDL 459
+A + K+TP SV+RV WS DG+F+GVAFTKHLI +YA++G N+L Q EIDAH+G VNDL
Sbjct: 374 EALIAKETPISVTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHTEIDAHVGAVNDL 433
Query: 460 AFAHPNKQLCVVTCGDDKLIK---------VWDLTGRRLFNFEGHEAPVYSICPHHKENI 510
AFA+PN+QLCV+TCGDDKLIK VWD++GR+ F FEGH+APVYSICPH+KENI
Sbjct: 434 AFANPNRQLCVITCGDDKLIKLANLINVEQVWDVSGRKHFTFEGHDAPVYSICPHYKENI 493
Query: 511 Q---------------------------------FIFSTAVDGKIKAWLYDNMGSRVDYD 537
Q FIFSTA+DGKIKAWLYDN+GSRVDYD
Sbjct: 494 QVRQGLNQTIFYINYYTVLPIRLKNNKVDDTFHIFIFSTAIDGKIKAWLYDNLGSRVDYD 553
Query: 538 APGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDT 597
APG WCT MLYSADGTRLFSCGTSKDGDSFLVEWNESEG+IKRTY F+KK AGVVQFDT
Sbjct: 554 APGKWCTRMLYSADGTRLFSCGTSKDGDSFLVEWNESEGSIKRTYKEFQKKLAGVVQFDT 613
Query: 598 TQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNGFKI 657
++N FLA GED QIKFWDM+N+N LTST+AEGGL LPHLRFNK+GNLLAVTTADNGFKI
Sbjct: 614 SKNHFLAVGEDGQIKFWDMNNINVLTSTDAEGGLPALPHLRFNKDGNLLAVTTADNGFKI 673
Query: 658 LANAGGLRSLRTVETPAFEALRSPIESAA 686
LAN G RSLR +ETPA E +R+P++ A
Sbjct: 674 LANPAGFRSLRAMETPASETMRTPVDFKA 702
>pir||G96836 unknown protein T21F11.18 [imported] - Arabidopsis thaliana
gi|6730738|gb|AAF27128.1| unknown protein; 52184-57536
[Arabidopsis thaliana]
Length = 1073
Score = 421 bits (1083), Expect = e-116
Identities = 230/351 (65%), Positives = 261/351 (73%), Gaps = 12/351 (3%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYFE++V G W+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDR D+PKAV+ILV DLKVFSTFNEEL+KEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IML+ELKKLIEANPLFRDKL FPTL++SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLF+DHSC N AP+PVN P+ + P A +GAHGPF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCRLPNDARAPSPVNNPLLG-SLPKAEGFPPLGAHGPF 239
Query: 241 PPAAATANANALAGWMANASVSSSVQAAVVTASTIPVPHNQV-SILKRPITPSTTPGMVE 299
P + LAGWM S SSV V+ I + + + LK P TP + V+
Sbjct: 240 QPTPSPV-PTPLAGWM---SSPSSVPHPAVSGGPIALGAPSIQAALKHPRTPPSN-SAVD 294
Query: 300 YQSADHEQLMKRLRPAPSVEEVS-----YPSARQASWSLDDLPRTVAMSLH 345
Y S D + + KR RP +E + S + WS D VA S H
Sbjct: 295 YPSGDSDHVSKRTRPMGISDEAALVKEPVVSVNRVIWSPDGSLFGVAYSRH 345
Score = 418 bits (1074), Expect = e-115
Identities = 195/286 (68%), Positives = 238/286 (83%), Gaps = 2/286 (0%)
Query: 401 QAAVVKD-TPSVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDL 459
+AA+VK+ SV+RV WS DGS GVA+++H++ +Y+Y+G ++ Q +EIDAH+GGVND+
Sbjct: 315 EAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDI 374
Query: 460 AFAHPNKQLCVVTCGDDKLIKVWDL-TGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAV 518
AF+ PNKQLCV TCGDDK IKVWD TG + + FEGHEAPVYSICPH+KENIQFIFSTA+
Sbjct: 375 AFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTAL 434
Query: 519 DGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAI 578
DGKIKAWLYDNMGSRVDY+APG WCTTM YSADGTRLFSCGTSKDG+SF+VEWNESEGA+
Sbjct: 435 DGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAV 494
Query: 579 KRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLR 638
KRTY GF K+S GVVQFDTT+NR+LAAG+D IKFWDMD + LT+ +A+GGLQ P +R
Sbjct: 495 KRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQASPRIR 554
Query: 639 FNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIES 684
FNKEG+LLAV+ DN K++AN+ GLR L TVE + E+ + I S
Sbjct: 555 FNKEGSLLAVSANDNMIKVMANSDGLRLLHTVENLSSESSKPAINS 600
>ref|NP_912774.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 930
Score = 399 bits (1025), Expect = e-109
Identities = 204/255 (80%), Positives = 222/255 (87%), Gaps = 15/255 (5%)
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFL+EEKFKE+VHKLE+ESGFFFNMKYFEEKV AGEW+EVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEEKVHAGEWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDR D+ KAV+ILV DLKVFSTFNEELYKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVDILVKDLKVFSTFNEELYKEITQLLT 120
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IML+ELKKLIEANPLFR+KLVFPTLK+SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARSIMLIELKKLIEANPLFREKLVFPTLKASRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPF 240
WQHQLCKNPRPNPDIKTLF DH+CTP NG A +PV++P+AAV K A G +
Sbjct: 181 WQHQLCKNPRPNPDIKTLFTDHTCTPPNGARA-SPVSVPLAAVPK----------AGGTY 229
Query: 241 PPAAATANANALAGW 255
PP A+ GW
Sbjct: 230 PP----LTAHTRVGW 240
Score = 365 bits (936), Expect = 6e-99
Identities = 187/281 (66%), Positives = 213/281 (75%), Gaps = 39/281 (13%)
Query: 421 SFV--GVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKL 478
SFV GVAF KHLIH++AY NE Q +
Sbjct: 268 SFVVSGVAFAKHLIHLHAYQQPNETRQ--------------------------------V 295
Query: 479 IKVWDLTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDA 538
++VWD+ G++LF+FEGHEAPVYSICPHHKE+IQFIFST++DGKIKAWLYD+MGSRVDYDA
Sbjct: 296 LEVWDMHGQKLFSFEGHEAPVYSICPHHKESIQFIFSTSLDGKIKAWLYDHMGSRVDYDA 355
Query: 539 PGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSA--GVVQFD 596
PG WCTTMLYSADGTRLFSCGTSKDGDS+LVEWNESEG+IKRTY+GFRKKSA GVVQFD
Sbjct: 356 PGKWCTTMLYSADGTRLFSCGTSKDGDSYLVEWNESEGSIKRTYSGFRKKSAGVGVVQFD 415
Query: 597 TTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNGFK 656
T QN LAAGED+QIKFWD+DN L+STEA+GGL GLP LRFNKEGNLLAVTT DNGFK
Sbjct: 416 TAQNHILAAGEDNQIKFWDVDNTTMLSSTEADGGLPGLPRLRFNKEGNLLAVTTVDNGFK 475
Query: 657 ILANAGGLRSLRTVETPAFEALRSPIESAANKAVKWKGAPL 697
ILANA GLR+LR FEA RS E++ ++K GAP+
Sbjct: 476 ILANADGLRTLRAFGNRPFEAFRSQYEAS---SMKVSGAPV 513
>gb|AAV50007.1| WD-40 repeat protein [Malus x domestica]
Length = 182
Score = 271 bits (694), Expect = 7e-71
Identities = 123/179 (68%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 454 GGVNDLAFAHPNKQLCVVTCGDDKLIKVWDLT-GRRLFNFEGHEAPVYSICPHHKENIQF 512
G VNDLAF +P K+LC +TCGDDK IKVW+ T G +L+ FEGH+A V+S+CPH+KEN+ F
Sbjct: 2 GSVNDLAFCNPAKKLCAITCGDDKAIKVWNATTGSKLYTFEGHDAAVHSVCPHNKENVHF 61
Query: 513 IFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWN 572
FST+V+GKIKAWLYDNMG RVDYDAPGH TTM YSADG RLFSCGTSKDG+S +VEWN
Sbjct: 62 FFSTSVNGKIKAWLYDNMGYRVDYDAPGHSITTMAYSADGKRLFSCGTSKDGESHVVEWN 121
Query: 573 ESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGL 631
E++G IKR Y GF+K S+GVVQFDT++N++LA G+D IK WDMD +N LT+ +AEGGL
Sbjct: 122 ENDGVIKRNYVGFQKPSSGVVQFDTSENKYLAVGDDYAIKVWDMDKINILTTIDAEGGL 180
>gb|AAD20702.2| hypothetical protein [Arabidopsis thaliana]
Length = 730
Score = 99.0 bits (245), Expect = 8e-19
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 18/171 (10%)
Query: 6 RELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKVDD 65
+ LVFLILQF +EE ++ES+H LE++SG FF+ Y + G W++ + YLS FT +
Sbjct: 9 KNLVFLILQFFDEEGYEESLHLLEQDSGVFFDFSYLSNAILNGNWKDADDYLSAFTSPEA 68
Query: 66 NRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLTLTNFR 125
N +S K+FF L + +AV+I DL+ ++ + ++ +++ T
Sbjct: 69 NTFSRKMFF---------GLFKSGGSEAVKIFSKDLRRIPVLKDDSFDDLVEVIAET--- 116
Query: 126 ENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLIN 176
D R + ++L KL E+NP R KL FP+L S L LI+
Sbjct: 117 ------CCVDKAPGRAKLCVDLHKLAESNPSLRGKLDFPSLNKSALLALIS 161
Score = 92.0 bits (227), Expect = 1e-16
Identities = 55/178 (30%), Positives = 92/178 (50%), Gaps = 38/178 (21%)
Query: 4 LSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKV 63
L +L+ LILQFL E K+K ++HKLE+E+ FFN+ Y E ++ GE+ + E+YL FT
Sbjct: 174 LKEDLICLILQFLYEAKYKNTLHKLEQETKVFFNLNYLAEVMKLGEYGKAEEYLGAFTNW 233
Query: 64 DDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLTLTN 123
+DN+YS +F E++K L++ + ++ T +
Sbjct: 234 EDNKYSKAMFLELQKLICLQSTE-----------------------------WEVATPSG 264
Query: 124 FRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLNW 181
+N L K + +L K NP+ +D+L FP+++ SRL TL+ Q+++W
Sbjct: 265 SLDNMSLK----IKLHASVAMLAKK-----NPVLKDELKFPSMEKSRLLTLVKQTMDW 313
>ref|NP_565594.2| transducin family protein / WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 717
Score = 99.0 bits (245), Expect = 8e-19
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 18/171 (10%)
Query: 6 RELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKVDD 65
+ LVFLILQF +EE ++ES+H LE++SG FF+ Y + G W++ + YLS FT +
Sbjct: 9 KNLVFLILQFFDEEGYEESLHLLEQDSGVFFDFSYLSNAILNGNWKDADDYLSAFTSPEA 68
Query: 66 NRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLTLTNFR 125
N +S K+FF L + +AV+I DL+ ++ + ++ +++ T
Sbjct: 69 NTFSRKMFF---------GLFKSGGSEAVKIFSKDLRRIPVLKDDSFDDLVEVIAET--- 116
Query: 126 ENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLIN 176
D R + ++L KL E+NP R KL FP+L S L LI+
Sbjct: 117 ------CCVDKAPGRAKLCVDLHKLAESNPSLRGKLDFPSLNKSALLALIS 161
Score = 92.0 bits (227), Expect = 1e-16
Identities = 55/178 (30%), Positives = 92/178 (50%), Gaps = 38/178 (21%)
Query: 4 LSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKV 63
L +L+ LILQFL E K+K ++HKLE+E+ FFN+ Y E ++ GE+ + E+YL FT
Sbjct: 174 LKEDLICLILQFLYEAKYKNTLHKLEQETKVFFNLNYLAEVMKLGEYGKAEEYLGAFTNW 233
Query: 64 DDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLTLTN 123
+DN+YS +F E++K L++ + ++ T +
Sbjct: 234 EDNKYSKAMFLELQKLICLQSTE-----------------------------WEVATPSG 264
Query: 124 FRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLNW 181
+N L K + +L K NP+ +D+L FP+++ SRL TL+ Q+++W
Sbjct: 265 SLDNMSLK----IKLHASVAMLAKK-----NPVLKDELKFPSMEKSRLLTLVKQTMDW 313
>pir||B84648 hypothetical protein At2g25420 [imported] - Arabidopsis thaliana
Length = 572
Score = 92.0 bits (227), Expect = 1e-16
Identities = 55/178 (30%), Positives = 92/178 (50%), Gaps = 38/178 (21%)
Query: 4 LSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKV 63
L +L+ LILQFL E K+K ++HKLE+E+ FFN+ Y E ++ GE+ + E+YL FT
Sbjct: 93 LKEDLICLILQFLYEAKYKNTLHKLEQETKVFFNLNYLAEVMKLGEYGKAEEYLGAFTNW 152
Query: 64 DDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLTLTN 123
+DN+YS +F E++K L++ + ++ T +
Sbjct: 153 EDNKYSKAMFLELQKLICLQSTE-----------------------------WEVATPSG 183
Query: 124 FRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLNW 181
+N L K + +L K NP+ +D+L FP+++ SRL TL+ Q+++W
Sbjct: 184 SLDNMSLK----IKLHASVAMLAKK-----NPVLKDELKFPSMEKSRLLTLVKQTMDW 232
Score = 35.8 bits (81), Expect = 8.3
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 103 VFSTFNEELYKEITQLLTLTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLV 162
+ F+EE Y+E L+ + + D R + ++L KL E+NP R KL
Sbjct: 15 ILQFFDEEGYEESLHLIP--------EETCCVDKAPGRAKLCVDLHKLAESNPSLRGKLD 66
Query: 163 FPTLKSSRLRTLIN 176
FP+L S L LI+
Sbjct: 67 FPSLNKSALLALIS 80
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.333 0.143 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,840,915,447
Number of Sequences: 2540612
Number of extensions: 76985488
Number of successful extensions: 322121
Number of sequences better than 10.0: 2204
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 2192
Number of HSP's that attempted gapping in prelim test: 314115
Number of HSP's gapped (non-prelim): 7974
length of query: 1115
length of database: 863,360,394
effective HSP length: 139
effective length of query: 976
effective length of database: 510,215,326
effective search space: 497970158176
effective search space used: 497970158176
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 81 (35.8 bits)
Medicago: description of AC144513.3