BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144481.8 + phase: 0 /pseudo
(119 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB02285.1| unnamed protein product [Arabidopsis thaliana] g... 135 2e-31
emb|CAC87643.1| alcohol oxidase [Arabidopsis thaliana] 135 2e-31
ref|NP_171895.2| alcohol oxidase-related [Arabidopsis thaliana] 135 2e-31
pir||A86171 hypothetical protein [imported] - Arabidopsis thalia... 135 2e-31
gb|AAM63097.1| unknown [Arabidopsis thaliana] 132 1e-30
emb|CAB81445.1| putative protein [Arabidopsis thaliana] gi|22798... 131 3e-30
gb|AAK64154.1| unknown protein [Arabidopsis thaliana] 131 3e-30
ref|XP_466807.1| putative alcohol oxidase [Oryza sativa (japonic... 125 2e-28
gb|AAL31021.1| putative alcohol oxidase [Oryza sativa] 112 3e-24
gb|AAP54256.1| putative oxidase [Oryza sativa (japonica cultivar... 108 3e-23
gb|AAP54248.1| putative alcohol oxidase [Oryza sativa (japonica ... 107 9e-23
gb|AAP54254.1| putative alcohol oxidase [Oryza sativa (japonica ... 100 6e-21
ref|NP_193673.2| alcohol oxidase-related [Arabidopsis thaliana] 82 2e-15
emb|CAB78940.1| putative protein [Arabidopsis thaliana] gi|30803... 81 7e-15
ref|YP_117187.1| putative oxidoreductase [Nocardia farcinica IFM... 60 9e-09
ref|YP_000037.1| GMC oxidoreductase [Leptospira interrogans sero... 59 2e-08
ref|XP_331369.1| hypothetical protein [Neurospora crassa] gi|289... 57 1e-07
ref|XP_629786.1| hypothetical protein DDB0184181 [Dictyostelium ... 55 3e-07
gb|AAQ60160.1| probable glucose-methanol-choline oxidoreductase ... 53 2e-06
ref|ZP_00506378.1| oxidoreductase, GMC family [Polaromonas sp. J... 51 7e-06
>dbj|BAB02285.1| unnamed protein product [Arabidopsis thaliana]
gi|27363420|gb|AAO11629.1| At3g23410/MLM24_23
[Arabidopsis thaliana] gi|13605692|gb|AAK32839.1|
AT3g23410/MLM24_23 [Arabidopsis thaliana]
gi|18403753|ref|NP_566729.1| alcohol oxidase-related
[Arabidopsis thaliana]
Length = 746
Score = 135 bits (341), Expect = 2e-31
Identities = 67/107 (62%), Positives = 84/107 (77%), Gaps = 1/107 (0%)
Query: 6 NGENQAWEAIGYHVDNDEST-SNIQKERPLEKGIVEAMNEDDLSLAQSLSNKGLEIDIDA 64
NGEN AWEAIGY V+ DE+ S ERPLEKGIVE M E + +L +SL++KGLE +D
Sbjct: 165 NGENPAWEAIGYRVNPDENKPSETHNERPLEKGIVETMEETEQTLLESLAHKGLEAVLDT 224
Query: 65 NSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRD 111
+ +++KCDVV+VGSG GGGVAA+VLA SGLKV+VLEKG+YFTP +
Sbjct: 225 EHDAIRIKCDVVVVGSGSGGGVAASVLAKSGLKVVVLEKGSYFTPSE 271
>emb|CAC87643.1| alcohol oxidase [Arabidopsis thaliana]
Length = 678
Score = 135 bits (341), Expect = 2e-31
Identities = 67/107 (62%), Positives = 84/107 (77%), Gaps = 1/107 (0%)
Query: 6 NGENQAWEAIGYHVDNDEST-SNIQKERPLEKGIVEAMNEDDLSLAQSLSNKGLEIDIDA 64
NGEN AWEAIGY V+ DE+ S ERPLEKGIVE M E + +L +SL++KGLE +D
Sbjct: 97 NGENPAWEAIGYRVNPDENKPSETHNERPLEKGIVETMEETEQTLLESLAHKGLEAVLDT 156
Query: 65 NSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRD 111
+ +++KCDVV+VGSG GGGVAA+VLA SGLKV+VLEKG+YFTP +
Sbjct: 157 EHDAIRIKCDVVVVGSGSGGGVAASVLAKSGLKVVVLEKGSYFTPSE 203
>ref|NP_171895.2| alcohol oxidase-related [Arabidopsis thaliana]
Length = 758
Score = 135 bits (340), Expect = 2e-31
Identities = 60/111 (54%), Positives = 84/111 (75%)
Query: 4 DENGENQAWEAIGYHVDNDESTSNIQKERPLEKGIVEAMNEDDLSLAQSLSNKGLEIDID 63
+EN EN W+AI Y V+ E+ QKERPL++GI+E ED++++ Q + NKGL++ D
Sbjct: 177 NENSENPVWDAINYSVEIGENEDMEQKERPLDEGIIETAKEDEMTIKQRMINKGLKVTED 236
Query: 64 ANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFSS 114
+ K++CD V+VGSGCGGGVAAA+LA SGL+V+V+EKGNYF PRD+S+
Sbjct: 237 RERDTYKIECDAVVVGSGCGGGVAAAILAKSGLRVVVIEKGNYFAPRDYSA 287
>pir||A86171 hypothetical protein [imported] - Arabidopsis thaliana
gi|4204315|gb|AAD10696.1| Unknown protein [Arabidopsis
thaliana]
Length = 736
Score = 135 bits (340), Expect = 2e-31
Identities = 60/111 (54%), Positives = 84/111 (75%)
Query: 4 DENGENQAWEAIGYHVDNDESTSNIQKERPLEKGIVEAMNEDDLSLAQSLSNKGLEIDID 63
+EN EN W+AI Y V+ E+ QKERPL++GI+E ED++++ Q + NKGL++ D
Sbjct: 155 NENSENPVWDAINYSVEIGENEDMEQKERPLDEGIIETAKEDEMTIKQRMINKGLKVTED 214
Query: 64 ANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFSS 114
+ K++CD V+VGSGCGGGVAAA+LA SGL+V+V+EKGNYF PRD+S+
Sbjct: 215 RERDTYKIECDAVVVGSGCGGGVAAAILAKSGLRVVVIEKGNYFAPRDYSA 265
>gb|AAM63097.1| unknown [Arabidopsis thaliana]
Length = 748
Score = 132 bits (333), Expect = 1e-30
Identities = 67/117 (57%), Positives = 85/117 (72%), Gaps = 5/117 (4%)
Query: 2 QYDENGENQAWEAIGYHVDNDESTSNI-----QKERPLEKGIVEAMNEDDLSLAQSLSNK 56
Q DEN +N A EAIGY +D E +SN +K RPLEKGI+E M+E DL++ QSL+ K
Sbjct: 162 QTDENLKNPALEAIGYCIDGTERSSNKKSEADEKRRPLEKGIIETMHESDLTITQSLTEK 221
Query: 57 GLEIDIDANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFS 113
G+ + D N+ +++CD V+VGSG GGGVAAA LA +GLKVLVLEKGNYFT D+S
Sbjct: 222 GVHVARDDGDNVYRIRCDAVVVGSGSGGGVAAANLAKAGLKVLVLEKGNYFTAHDYS 278
>emb|CAB81445.1| putative protein [Arabidopsis thaliana] gi|22798798|emb|CAC87644.1|
alcohol oxidase [Arabidopsis thaliana]
gi|15235348|ref|NP_194586.1| alcohol oxidase-related
[Arabidopsis thaliana] gi|25054929|gb|AAN71941.1|
unknown protein [Arabidopsis thaliana]
gi|7487681|pir||T10651 hypothetical protein T5F17.20 -
Arabidopsis thaliana
Length = 748
Score = 131 bits (330), Expect = 3e-30
Identities = 66/117 (56%), Positives = 85/117 (72%), Gaps = 5/117 (4%)
Query: 2 QYDENGENQAWEAIGYHVDNDESTSNI-----QKERPLEKGIVEAMNEDDLSLAQSLSNK 56
Q DEN +N A EAIGY +D E +SN +K RPLEKGI+E M+E D+++ QSL+ K
Sbjct: 162 QTDENLKNPALEAIGYCIDGTERSSNKKSEADEKRRPLEKGIIETMHESDVTITQSLTEK 221
Query: 57 GLEIDIDANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFS 113
G+ + D N+ +++CD V+VGSG GGGVAAA LA +GLKVLVLEKGNYFT D+S
Sbjct: 222 GVHVARDDGDNVYRIRCDAVVVGSGSGGGVAAANLAKAGLKVLVLEKGNYFTAHDYS 278
>gb|AAK64154.1| unknown protein [Arabidopsis thaliana]
Length = 748
Score = 131 bits (330), Expect = 3e-30
Identities = 66/117 (56%), Positives = 85/117 (72%), Gaps = 5/117 (4%)
Query: 2 QYDENGENQAWEAIGYHVDNDESTSNI-----QKERPLEKGIVEAMNEDDLSLAQSLSNK 56
Q DEN +N A EAIGY +D E +SN +K RPLEKGI+E M+E D+++ QSL+ K
Sbjct: 162 QTDENLKNPALEAIGYCIDGTERSSNKKSEADEKRRPLEKGIIETMHESDVTITQSLTEK 221
Query: 57 GLEIDIDANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFS 113
G+ + D N+ +++CD V+VGSG GGGVAAA LA +GLKVLVLEKGNYFT D+S
Sbjct: 222 GVHVARDDGDNVYRIRCDAVVVGSGSGGGVAAANLAKAGLKVLVLEKGNYFTAHDYS 278
>ref|XP_466807.1| putative alcohol oxidase [Oryza sativa (japonica cultivar-group)]
gi|47847770|dbj|BAD21547.1| putative alcohol oxidase
[Oryza sativa (japonica cultivar-group)]
Length = 770
Score = 125 bits (315), Expect = 2e-28
Identities = 64/114 (56%), Positives = 79/114 (69%), Gaps = 3/114 (2%)
Query: 4 DENGENQAWEAIGYHVDNDESTSNIQKE---RPLEKGIVEAMNEDDLSLAQSLSNKGLEI 60
DE+ EN W AIGY DE + E RPL+ G+VE +N D SL SL+ KGL +
Sbjct: 191 DESSENPHWRAIGYSPPTDEPPAEEHTEATKRPLDDGVVETINLTDASLPSSLAEKGLAV 250
Query: 61 DIDANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFSS 114
DA N+ +V+CDV IVGSGCGGGVAAAVLA +G KV+V+EKGNYFT RD++S
Sbjct: 251 TDDAARNVCRVECDVAIVGSGCGGGVAAAVLAGAGHKVVVIEKGNYFTSRDYTS 304
>gb|AAL31021.1| putative alcohol oxidase [Oryza sativa]
Length = 590
Score = 112 bits (279), Expect = 3e-24
Identities = 62/124 (50%), Positives = 80/124 (64%), Gaps = 11/124 (8%)
Query: 1 MQYDENGENQAWEAIGYHVDNDE----------STSNIQKERPLEKGIVEAMNEDDLSLA 50
MQ +EN EN W+AIGY V+ S S + + RPL+ G+VE D +L
Sbjct: 1 MQVNENSENPYWKAIGYRVEEPRRDRAESMPSPSPSPVSR-RPLDNGVVETRALTDTTLL 59
Query: 51 QSLSNKGLEIDIDANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPR 110
+SL+ KGL + A+ V+CD VIVGSGCGGGVAAAVLAS+G KV+V+EKG+YFT
Sbjct: 60 RSLAAKGLAVRPGASDEHHTVRCDAVIVGSGCGGGVAAAVLASAGYKVVVVEKGDYFTKE 119
Query: 111 DFSS 114
D+SS
Sbjct: 120 DYSS 123
>gb|AAP54256.1| putative oxidase [Oryza sativa (japonica cultivar-group)]
gi|37535334|ref|NP_921969.1| putative oxidase [Oryza
sativa (japonica cultivar-group)]
gi|16905179|gb|AAL31049.1| putative oxidase [Oryza
sativa]
Length = 595
Score = 108 bits (270), Expect = 3e-23
Identities = 60/121 (49%), Positives = 78/121 (63%), Gaps = 11/121 (9%)
Query: 4 DENGENQAWEAIGYHVDNDE----------STSNIQKERPLEKGIVEAMNEDDLSLAQSL 53
+EN EN W+AIGY V+ S S + + RPL+ G+VE D +L +SL
Sbjct: 9 NENSENPYWKAIGYRVEEPRRDRAESMPSPSPSPVSR-RPLDNGVVETRALTDTTLLRSL 67
Query: 54 SNKGLEIDIDANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFS 113
+ KGL + A+ V+CD VIVGSGCGGGVAAAVLAS+G KV+V+EKG+YFT D+S
Sbjct: 68 AAKGLAVRPGASDEHHTVRCDAVIVGSGCGGGVAAAVLASAGYKVVVVEKGDYFTKEDYS 127
Query: 114 S 114
S
Sbjct: 128 S 128
>gb|AAP54248.1| putative alcohol oxidase [Oryza sativa (japonica cultivar-group)]
gi|37535318|ref|NP_921961.1| putative alcohol oxidase
[Oryza sativa (japonica cultivar-group)]
gi|16905154|gb|AAL31024.1| putative alcohol oxidase
[Oryza sativa]
Length = 756
Score = 107 bits (266), Expect = 9e-23
Identities = 65/134 (48%), Positives = 79/134 (58%), Gaps = 22/134 (16%)
Query: 1 MQYDENGENQAWEAIGYHVDNDESTSNIQKE-----------------RPLEKGIVEAMN 43
M DEN EN +W+AIGY V E QKE RPL+ G+VE
Sbjct: 143 MPVDENLENPSWKAIGYSVPAAEEEP--QKEEPTEATPTPAPATAPPCRPLDNGVVETKQ 200
Query: 44 EDDLSLAQSLSNKGLEIDIDANSNILK---VKCDVVIVGSGCGGGVAAAVLASSGLKVLV 100
DD +L SL+ KGL + A+S V CD V+VGSGCGGGVAAAVLAS+G KV+V
Sbjct: 201 LDDNALLMSLAEKGLALKTGASSPSAHHHTVLCDAVVVGSGCGGGVAAAVLASAGYKVVV 260
Query: 101 LEKGNYFTPRDFSS 114
+EKG+YF RD+SS
Sbjct: 261 VEKGDYFAARDYSS 274
>gb|AAP54254.1| putative alcohol oxidase [Oryza sativa (japonica cultivar-group)]
gi|37535330|ref|NP_921967.1| putative alcohol oxidase
[Oryza sativa (japonica cultivar-group)]
gi|16905157|gb|AAL31027.1| putative alcohol oxidase
[Oryza sativa]
Length = 637
Score = 100 bits (250), Expect = 6e-21
Identities = 55/117 (47%), Positives = 73/117 (62%), Gaps = 7/117 (5%)
Query: 4 DENGENQAWEAIGYHVDNDESTSNIQKE------RPLEKGIVEAMNEDDLSLAQSLSNKG 57
DE N +W+AIGY + + Q+ RPLE G+VE DD +L +SL KG
Sbjct: 61 DEKSRNPSWKAIGYAAPAAAAAAVEQRRPASPSRRPLEDGVVETRRMDDNALLRSLVEKG 120
Query: 58 LEIDIDANSNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFSS 114
L + ++ V+CD V+VGSGCGGGVAAAVLAS G KV+V+EKG+YF D++S
Sbjct: 121 LAVKTGTAAHHT-VQCDAVVVGSGCGGGVAAAVLASKGYKVVVVEKGDYFATEDYTS 176
>ref|NP_193673.2| alcohol oxidase-related [Arabidopsis thaliana]
Length = 726
Score = 82.4 bits (202), Expect = 2e-15
Identities = 49/127 (38%), Positives = 74/127 (57%), Gaps = 22/127 (17%)
Query: 2 QYDENGENQAWEAIGY------HVDNDESTSNIQKER-------PLEKGIVEAMNEDDLS 48
Q DE G N AW+AIGY H D++ + +K++ PL GIV+ + + +
Sbjct: 133 QVDEKGRNLAWKAIGYNGPSPDHSDHEVELNEEKKKKKPEEIFGPLYNGIVDLKSPRE-A 191
Query: 49 LAQSLSNKGLEIDIDA-NSN-------ILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLV 100
+ + L+ +G + N+N ++K++CD V+VGSG GGGVAA VLA +G KVLV
Sbjct: 192 VEKKLAGRGFAVSNQKRNTNGSSISDPVMKIQCDAVVVGSGSGGGVAAGVLAKAGYKVLV 251
Query: 101 LEKGNYF 107
+E GNY+
Sbjct: 252 IESGNYY 258
>emb|CAB78940.1| putative protein [Arabidopsis thaliana] gi|3080368|emb|CAA18625.1|
putative protein [Arabidopsis thaliana]
gi|7487715|pir||T05821 hypothetical protein T5K18.160 -
Arabidopsis thaliana
Length = 678
Score = 80.9 bits (198), Expect = 7e-15
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 22/125 (17%)
Query: 4 DENGENQAWEAIGY------HVDNDESTSNIQKER-------PLEKGIVEAMNEDDLSLA 50
DE G N AW+AIGY H D++ + +K++ PL GIV+ + + ++
Sbjct: 87 DEKGRNLAWKAIGYNGPSPDHSDHEVELNEEKKKKKPEEIFGPLYNGIVDLKSPRE-AVE 145
Query: 51 QSLSNKGLEIDIDA-NSN-------ILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLE 102
+ L+ +G + N+N ++K++CD V+VGSG GGGVAA VLA +G KVLV+E
Sbjct: 146 KKLAGRGFAVSNQKRNTNGSSISDPVMKIQCDAVVVGSGSGGGVAAGVLAKAGYKVLVIE 205
Query: 103 KGNYF 107
GNY+
Sbjct: 206 SGNYY 210
>ref|YP_117187.1| putative oxidoreductase [Nocardia farcinica IFM 10152]
gi|54014453|dbj|BAD55823.1| putative oxidoreductase
[Nocardia farcinica IFM 10152]
Length = 664
Score = 60.5 bits (145), Expect = 9e-09
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 73 CDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFSS 114
CDVV+VGSG GGG AAAVLA +GL V+VLE+G+Y+ DF +
Sbjct: 174 CDVVVVGSGAGGGTAAAVLAEAGLDVVVLERGDYYDDADFGN 215
>ref|YP_000037.1| GMC oxidoreductase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130] gi|24212742|ref|NP_710223.1| GMC
oxidoreductase [Leptospira interrogans serovar Lai str.
56601] gi|24193381|gb|AAN47241.1| GMC oxidoreductase
[Leptospira interrogans serovar lai str. 56601]
gi|45599184|gb|AAS68674.1| GMC oxidoreductase
[Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 537
Score = 59.3 bits (142), Expect = 2e-08
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 66 SNILKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFSSRRFL 118
+ I ++ DVV++GSG GG VAAA LA +G V+++E+G+YFTP F+ F+
Sbjct: 28 NGIWELNSDVVVIGSGAGGAVAAATLAKNGWNVILIEEGSYFTPAQFNGNEFI 80
>ref|XP_331369.1| hypothetical protein [Neurospora crassa] gi|28920401|gb|EAA29769.1|
hypothetical protein [Neurospora crassa]
Length = 763
Score = 56.6 bits (135), Expect = 1e-07
Identities = 26/39 (66%), Positives = 31/39 (78%)
Query: 71 VKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTP 109
V DVVI+GSGCGGGV A VLA +G +VLV++KG YF P
Sbjct: 220 VDTDVVIIGSGCGGGVCAKVLAEAGHRVLVVDKGYYFNP 258
>ref|XP_629786.1| hypothetical protein DDB0184181 [Dictyostelium discoideum]
gi|60463184|gb|EAL61377.1| hypothetical protein
DDB0184181 [Dictyostelium discoideum]
Length = 781
Score = 55.5 bits (132), Expect = 3e-07
Identities = 24/43 (55%), Positives = 34/43 (78%)
Query: 71 VKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFS 113
+K DVV++GSG GGGV AA+LA +G KV+VLEKG+Y + + +
Sbjct: 221 LKADVVVIGSGAGGGVTAALLAEAGYKVIVLEKGSYISSNNMT 263
>gb|AAQ60160.1| probable glucose-methanol-choline oxidoreductase [Chromobacterium
violaceum ATCC 12472] gi|34497944|ref|NP_902159.1|
probable glucose-methanol-choline oxidoreductase
[Chromobacterium violaceum ATCC 12472]
Length = 516
Score = 53.1 bits (126), Expect = 2e-06
Identities = 25/44 (56%), Positives = 33/44 (74%)
Query: 69 LKVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDF 112
L + DVVIVGSG GGG+AA VL+ +GL VL+LE+G ++ DF
Sbjct: 10 LSLAADVVIVGSGAGGGIAAEVLSRAGLDVLLLEEGGLYSSSDF 53
>ref|ZP_00506378.1| oxidoreductase, GMC family [Polaromonas sp. JS666]
gi|67780051|gb|EAM39668.1| oxidoreductase, GMC family
[Polaromonas sp. JS666]
Length = 541
Score = 50.8 bits (120), Expect = 7e-06
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 70 KVKCDVVIVGSGCGGGVAAAVLASSGLKVLVLEKGNYFTPRDFSSR 115
K+ CDV I+GSG G G+ A +LA +GL+VL++E+G + DF+ +
Sbjct: 29 KIVCDVAIIGSGAGAGITAELLAKAGLQVLIIEEGPLKSSSDFNQK 74
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.134 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,311,814
Number of Sequences: 2540612
Number of extensions: 7897345
Number of successful extensions: 31074
Number of sequences better than 10.0: 1785
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 29265
Number of HSP's gapped (non-prelim): 1914
length of query: 119
length of database: 863,360,394
effective HSP length: 95
effective length of query: 24
effective length of database: 622,002,254
effective search space: 14928054096
effective search space used: 14928054096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC144481.8