BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144430.7 + phase: 0 /pseudo
         (491 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAH75228.1| conserved hypothetical protein [Plasmodium chaba...    36  2.4
ref|NP_266481.1| ABC transporter ATP binding protein [Lactococcu...    36  3.1
gb|EAK88407.1| predicted DNAJ protein [Cryptosporidium parvum] g...    34  9.2

>emb|CAH75228.1| conserved hypothetical protein [Plasmodium chabaudi]
          Length = 846

 Score = 36.2 bits (82), Expect = 2.4
 Identities = 28/104 (26%), Positives = 55/104 (51%), Gaps = 12/104 (11%)

Query: 185 KNCRVLLKHMNCW*LIEVQKDQFNKLFRFKQPRKREILRISR--------REEVKQTGLI 236
           K+C+ +L   NC+ L +  + Q N+L +     K++ L IS          EE+K+  L+
Sbjct: 246 KSCKFILLKKNCYYLKKKIQKQNNELKKHLNIIKKQELAISNCSEQNEKLSEELKRHDLL 305

Query: 237 MQNPNLRTKL---NLLKEEVLEKIRTKRGILTRVKFSAIIVKNL 277
           +++ + + KL   NL+K+E +  I+ K      +K+  + +KN+
Sbjct: 306 IKSRDNKIKLLENNLIKKEEINHIQIKEN-ANAIKYGEMELKNI 348


>ref|NP_266481.1| ABC transporter ATP binding protein [Lactococcus lactis subsp.
           lactis Il1403] gi|12723191|gb|AAK04423.1| ABC
           transporter ATP binding protein [Lactococcus lactis
           subsp. lactis Il1403] gi|25402466|pir||E86665 ABC
           transporter ATP binding protein ydcE [imported] -
           Lactococcus lactis subsp. lactis (strain IL1403)
          Length = 565

 Score = 35.8 bits (81), Expect = 3.1
 Identities = 17/44 (38%), Positives = 26/44 (58%)

Query: 217 RKREILRISRREEVKQTGLIMQNPNLRTKLNLLKEEVLEKIRTK 260
           R++ I+  S  E  K+ G IMQNPNL    N++ +EV   +R +
Sbjct: 357 REQSIIADSISERAKKIGYIMQNPNLMISQNIVSDEVAAGLRLR 400


>gb|EAK88407.1| predicted DNAJ protein [Cryptosporidium parvum]
           gi|66362130|ref|XP_628029.1| predicted DNAJ protein
           [Cryptosporidium parvum]
          Length = 331

 Score = 34.3 bits (77), Expect = 9.2
 Identities = 27/97 (27%), Positives = 51/97 (51%), Gaps = 9/97 (9%)

Query: 208 NKLFRFKQPRKREILRISRREE---VKQTGLIMQNPNLRTKLNLLKEEVLEKIRTKRGIL 264
           NKL+R  +  K+E LRIS +EE   + +T + +    ++T   +L  E+  K  ++   L
Sbjct: 5   NKLYRIYKREKKEDLRISDKEEPLIISKTRMALLELEIKTLAYILSREL--KTSSQISNL 62

Query: 265 TRVKFSAIIVKNL----AILLMNVGSRKIRRLKKPIL 297
           + +K++ I   +L    +IL  NV   +I  + K ++
Sbjct: 63  SEIKWAEITTDDLDRLESILFENVYEIEINPIVKSLI 99


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.371    0.167    0.604 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 595,059,343
Number of Sequences: 2540612
Number of extensions: 19148449
Number of successful extensions: 125625
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 125623
Number of HSP's gapped (non-prelim): 4
length of query: 491
length of database: 863,360,394
effective HSP length: 132
effective length of query: 359
effective length of database: 527,999,610
effective search space: 189551859990
effective search space used: 189551859990
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 77 (34.3 bits)