BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144345.6 - phase: 0
(360 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL27029.1| matrix metalloproteinase MMP2 [Glycine max] 243 8e-63
emb|CAA77093.1| MtN9 [Medicago truncatula] 206 7e-52
ref|NP_177174.1| matrixin family protein [Arabidopsis thaliana] ... 147 4e-34
gb|AAU90055.1| At1g24140 [Arabidopsis thaliana] gi|30688744|ref|... 136 1e-30
sp|P29136|MEP1_SOYBN Metalloendoproteinase 1 precursor (SMEP1) g... 136 1e-30
pir||T00643 zinc metalloproteinase homolog F3I6.6 - Arabidopsis ... 136 1e-30
ref|NP_176205.1| matrixin family protein [Arabidopsis thaliana] ... 127 7e-28
gb|AAP68221.1| At2g45040 [Arabidopsis thaliana] gi|26452204|dbj|... 120 6e-26
ref|XP_467714.1| putative zinc metalloproteinase [Oryza sativa (... 118 2e-25
dbj|BAD37908.1| putative metalloproteinase [Oryza sativa (japoni... 118 2e-25
gb|AAP54980.1| putative metalloproteinase [Oryza sativa (japonic... 117 5e-25
gb|AAC31167.1| metalloproteinase [Arabidopsis thaliana] gi|25455... 117 5e-25
emb|CAB10439.1| proteinase like protein [Arabidopsis thaliana] g... 114 6e-24
gb|AAM62476.1| proteinase like protein [Arabidopsis thaliana] 114 6e-24
gb|AAO42162.1| putative proteinase [Arabidopsis thaliana] 114 6e-24
emb|CAB76364.1| matrix metalloproteinase [Cucumis sativus] 111 3e-23
prf||1905425A metalloprotease 86 1e-15
gb|EAL26300.1| GA18484-PA [Drosophila pseudoobscura] 83 1e-14
gb|AAG00603.1| matrix metalloproteinase-26 [Homo sapiens] gi|902... 83 1e-14
gb|AAP54983.1| putative metalloproteinase [Oryza sativa (japonic... 82 2e-14
>gb|AAL27029.1| matrix metalloproteinase MMP2 [Glycine max]
Length = 357
Score = 243 bits (619), Expect = 8e-63
Identities = 160/374 (42%), Positives = 224/374 (59%), Gaps = 34/374 (9%)
Query: 1 MMKLYQFEFFLFLLIIVNTTLS-SSFPTLSQFAKPLEY-IKKTTEAADYIWDKKIKKLVE 58
MMK +FLL + T LS S + S F K L+ ++K+ D++ I +
Sbjct: 1 MMKSSSHLSAIFLLFFLLTALSPSDGVSFSSFLKQLKQKLEKSPTLKDFLKPTTIGDIYY 60
Query: 59 DLKDKNLKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLEQSGPFNNTLDQETVL-ALKTYQ 117
L N I S P V IK YLS++GY+E SGP +N++DQET++ A+KTYQ
Sbjct: 61 TL---NFTEIFSSEERSAPP---VSLIKDYLSNYGYIESSGPLSNSMDQETIISAIKTYQ 114
Query: 118 RYFNIQQDTL--SEILQHIALPRCGVPDRILKYNLTND-ISFPK-GNQWFPKGTKNLTYG 173
+Y+ +Q +E LQ ++ RCGVPD + YN T+D +S+PK G++WFP NLTYG
Sbjct: 115 QYYCLQPTGKLNNETLQQMSFLRCGVPDINIDYNFTDDNMSYPKAGHRWFPH--TNLTYG 172
Query: 174 FDPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAV 233
F P N+IP +MT VFR + +W+ + VLN TET +YD+A+I++GFYN T GI+
Sbjct: 173 FLPENQIPANMTKVFRDSFARWAQASGVLNLTET-TYDNADIQVGFYNFTYL-GIDIEVY 230
Query: 234 GFTFIVLDSTNVKSGFITLDAT-KYWALPTEHRGF-------DLETAAMHQIGHLLGLEH 285
G + I L + K G I LD T K WALP+E+ DLE+AAMH+IGHLLGL+H
Sbjct: 231 GGSLIFLQPDSTKKGVILLDGTNKLWALPSENGRLSWEEGVLDLESAAMHEIGHLLGLDH 290
Query: 286 SSDNKSIMYPTILPSHQKNVQITDSDNLAIQKLYSSSTKANANSDDSSGCFKLFGSSSSL 345
S+ S+MYP ILPSHQ+ VQ++ SD +Q + AN +DS+G G SL
Sbjct: 291 SNKEDSVMYPCILPSHQRKVQLSKSDKTNVQHQF-------ANVEDSAGHVGRLG--VSL 341
Query: 346 LISLSIVFAFVALL 359
+ +LS+VFA++ LL
Sbjct: 342 ITTLSLVFAYLLLL 355
>emb|CAA77093.1| MtN9 [Medicago truncatula]
Length = 191
Score = 206 bits (525), Expect = 7e-52
Identities = 119/204 (58%), Positives = 141/204 (68%), Gaps = 20/204 (9%)
Query: 161 QWFPKGTKNLTYGFDPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFY 220
+WFPKGTK LTYGF P +KI +D NVFR A T+WS TTRVL F+E SYDDA+IKIGFY
Sbjct: 1 KWFPKGTKELTYGFLPESKISIDKVNVFRNAFTRWSQTTRVLKFSEATSYDDADIKIGFY 60
Query: 221 NIT-DDDGINDVAVGFTFIVLDSTNVKSGFITLDATKYWALPTEHRGFDLETAAMHQIGH 279
NI+ + + DV V FI N++S I L+A+K W DLET AMHQIGH
Sbjct: 61 NISYNSKEVIDVVVSDFFI-----NLRSFTIRLEASKVW---------DLETVAMHQIGH 106
Query: 280 LLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNLAIQKLYSSSTKANANS---DDSSGCF 336
LLGL+HSSD +SIMYPTI+P HQK VQIT SDN AIQ+LY+ T + + D SG F
Sbjct: 107 LLGLDHSSDVESIMYPTIVPLHQKKVQITVSDNQAIQQLYTKQTNQDRDELGFFDYSGDF 166
Query: 337 KLFGSSSSLLISLSIVFAFVALLN 360
F SSS LL SLS+ FAFVAL+N
Sbjct: 167 --FESSSGLLNSLSLGFAFVALMN 188
>ref|NP_177174.1| matrixin family protein [Arabidopsis thaliana]
gi|25406033|pir||E96724 hypothetical protein F20P5.11
[imported] - Arabidopsis thaliana
gi|2194124|gb|AAB61099.1| Similar to Glycine
metalloendoproteinase (gb|U63725). [Arabidopsis
thaliana]
Length = 378
Score = 147 bits (372), Expect = 4e-34
Identities = 106/314 (33%), Positives = 163/314 (51%), Gaps = 51/314 (16%)
Query: 81 GVDQIKQYLSDFGYLEQ--SGPFNNTLDQETVLALKTYQRYFNI----QQDTLSEILQHI 134
G+ +IK+Y FGY+ + SG F + D A++ YQ FN+ + D L+ +QHI
Sbjct: 58 GLYRIKKYFQRFGYIPETFSGNFTDDFDDILKAAVELYQTNFNLNVTGELDALT--IQHI 115
Query: 135 ALPRCGVPDRILKYNL-------TNDISFPK-------------GNQWFPKGTKNLTYGF 174
+PRCG PD + +L T +++F + G +P+ ++LTY F
Sbjct: 116 VIPRCGNPDVVNGTSLMHGGRRKTFEVNFSRTHLHAVKRYTLFPGEPRWPRNRRDLTYAF 175
Query: 175 DPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVG 234
DP+N + ++ +VF A +WS+ T LNFT ++S+ ++I IGFY T D G + G
Sbjct: 176 DPKNPLTEEVKSVFSRAFGRWSDVT-ALNFTLSESFSTSDITIGFY--TGDHGDGEPFDG 232
Query: 235 FTFIVLDSTNVKSGFITLDATKYWALPTEHRGF-------DLETAAMHQIGHLLGLEHSS 287
+ + + SG LDA + W + + F DLE+ A+H+IGHLLGL HSS
Sbjct: 233 VLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLLGLGHSS 292
Query: 288 DNKSIMYPTILPSHQKNVQITDSDNLAIQKLYS------------SSTKANANSDDSSGC 335
+SIMYPTI +K V +T+ D IQ LY S+TK ++ S
Sbjct: 293 VEESIMYPTITTGKRK-VDLTNDDVEGIQYLYGANPNFNGTTSPPSTTKHQRDTGGFSAA 351
Query: 336 FKLFGSSSSLLISL 349
+++ GSS S ++SL
Sbjct: 352 WRIDGSSRSTIVSL 365
>gb|AAU90055.1| At1g24140 [Arabidopsis thaliana] gi|30688744|ref|NP_173824.2|
matrixin family protein [Arabidopsis thaliana]
Length = 384
Score = 136 bits (342), Expect = 1e-30
Identities = 93/285 (32%), Positives = 138/285 (47%), Gaps = 38/285 (13%)
Query: 78 KYKGVDQIKQYLSDFGYLEQ---SGPFNNTLDQETVLALKTYQRYFNIQ-QDTLSEI-LQ 132
KY G+ +KQY FGY+ + SG F + D A++ YQR F + L E+ L+
Sbjct: 57 KYDGLYMLKQYFQHFGYITETNLSGNFTDDFDDILKNAVEMYQRNFQLNVTGVLDELTLK 116
Query: 133 HIALPRCGVPD---------------------RILKYNLTNDISFPKGNQWFPKGTKNLT 171
H+ +PRCG PD R +++ SF G +P+ ++LT
Sbjct: 117 HVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQRFHAVKHYSFFPGEPRWPRNRRDLT 176
Query: 172 YGFDPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDV 231
Y FDPRN + ++ +VF A T+W T L FT + + ++I IGFY+ DG +
Sbjct: 177 YAFDPRNALTEEVKSVFSRAFTRWEEVTP-LTFTRVERFSTSDISIGFYSGEHGDG--EP 233
Query: 232 AVGFTFIVLDSTNVKSGFITLDATKYWALPTE--------HRGFDLETAAMHQIGHLLGL 283
G + + + +G LD + W + E DLE+ A+H+IGHLLGL
Sbjct: 234 FDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHEIGHLLGL 293
Query: 284 EHSSDNKSIMYPTILPSHQKNVQITDSDNLAIQKLYSSSTKANAN 328
HSS SIMYPTI +K V +T D +Q LY ++ N +
Sbjct: 294 GHSSVEGSIMYPTIRTGRRK-VDLTTDDVEGVQYLYGANPNFNGS 337
>sp|P29136|MEP1_SOYBN Metalloendoproteinase 1 precursor (SMEP1) gi|1679656|gb|AAB26959.1|
metalloproteinase [Glycine max]
Length = 305
Score = 136 bits (342), Expect = 1e-30
Identities = 91/260 (35%), Positives = 129/260 (49%), Gaps = 28/260 (10%)
Query: 79 YKGVDQIKQYLSDFGYLEQSGPFNNTLDQETVLALKTYQRYFNIQQDTLSEI--LQHIAL 136
YKG+ +K Y GY+ + F++ D V A+KTYQ+ +N+ +I L+ I
Sbjct: 51 YKGLSNVKNYFHHLGYIPNAPHFDDNFDDTLVSAIKTYQKNYNLNVTGKFDINTLKQIMT 110
Query: 137 PRCGVPDRILKYNLT------NDISFPKGNQWFPKGTKNLTYGFDPRNKIPLDMTNVFRT 190
PRCGVPD I+ N T +D +F K + GT LTY F P ++ +
Sbjct: 111 PRCGVPDIIINTNKTTSFGMISDYTFFKDMPRWQAGTTQLTYAFSPEPRLDDTFKSAIAR 170
Query: 191 ALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDD-----GINDVAVGFTFIVLDSTNV 245
A ++W+ + F ET SY+ ANIKI F + D G + +G F D
Sbjct: 171 AFSKWTPVVNIA-FQETTSYETANIKILFASKNHGDPYPFDGPGGI-LGHAFAPTD---- 224
Query: 246 KSGFITLDATKYWALPTE------HRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILP 299
G DA +YW + FDLE+ A+H+IGHLLGL HSSD ++IMYP+I P
Sbjct: 225 --GRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHEIGHLLGLGHSSDLRAIMYPSI-P 281
Query: 300 SHQKNVQITDSDNLAIQKLY 319
+ V + D I+KLY
Sbjct: 282 PRTRKVNLAQDDIDGIRKLY 301
>pir||T00643 zinc metalloproteinase homolog F3I6.6 - Arabidopsis thaliana
gi|2829864|gb|AAC00572.1| similar to zinc
metalloproteinases [Arabidopsis thaliana]
Length = 377
Score = 136 bits (342), Expect = 1e-30
Identities = 93/285 (32%), Positives = 138/285 (47%), Gaps = 38/285 (13%)
Query: 78 KYKGVDQIKQYLSDFGYLEQ---SGPFNNTLDQETVLALKTYQRYFNIQ-QDTLSEI-LQ 132
KY G+ +KQY FGY+ + SG F + D A++ YQR F + L E+ L+
Sbjct: 50 KYDGLYMLKQYFQHFGYITETNLSGNFTDDFDDILKNAVEMYQRNFQLNVTGVLDELTLK 109
Query: 133 HIALPRCGVPD---------------------RILKYNLTNDISFPKGNQWFPKGTKNLT 171
H+ +PRCG PD R +++ SF G +P+ ++LT
Sbjct: 110 HVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQRFHAVKHYSFFPGEPRWPRNRRDLT 169
Query: 172 YGFDPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDV 231
Y FDPRN + ++ +VF A T+W T L FT + + ++I IGFY+ DG +
Sbjct: 170 YAFDPRNALTEEVKSVFSRAFTRWEEVTP-LTFTRVERFSTSDISIGFYSGEHGDG--EP 226
Query: 232 AVGFTFIVLDSTNVKSGFITLDATKYWALPTE--------HRGFDLETAAMHQIGHLLGL 283
G + + + +G LD + W + E DLE+ A+H+IGHLLGL
Sbjct: 227 FDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHEIGHLLGL 286
Query: 284 EHSSDNKSIMYPTILPSHQKNVQITDSDNLAIQKLYSSSTKANAN 328
HSS SIMYPTI +K V +T D +Q LY ++ N +
Sbjct: 287 GHSSVEGSIMYPTIRTGRRK-VDLTTDDVEGVQYLYGANPNFNGS 330
>ref|NP_176205.1| matrixin family protein [Arabidopsis thaliana]
gi|4249376|gb|AAD14473.1| Strong similarity to
gi|2829864 F3I6.6 zinc metalloproteinase homolog from
Arabidopsis thaliana BAC gb|AC002396. EST gb|Z26412
comes from this gene gi|51971615|dbj|BAD44472.1|
predicted GPI-anchored protein [Arabidopsis thaliana]
Length = 360
Score = 127 bits (318), Expect = 7e-28
Identities = 97/308 (31%), Positives = 149/308 (47%), Gaps = 35/308 (11%)
Query: 81 GVDQIKQYLSDFGYLEQSGPFNNTLDQETVLALKTYQRYFNIQQDTL--SEILQHIALPR 138
G+ ++KQY FGY+ +G + D A+ TYQ+ FN++ S L+ I PR
Sbjct: 59 GLSKLKQYFRRFGYITTTGNCTDDFDDVLQSAINTYQKNFNLKVTGKLDSSTLRQIVKPR 118
Query: 139 CGVPD-----------RILKYNLTNDISFPKGNQWFPKGTKNLTYGFDPRNKIPLDMTNV 187
CG PD +IL+ T SF G +PK ++LTY F P+N + ++ V
Sbjct: 119 CGNPDLIDGVSEMNGGKILR--TTEKYSFFPGKPRWPKRKRDLTYAFAPQNNLTDEVKRV 176
Query: 188 FRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGIN-DVAVGFTFIVLDSTNVK 246
F A T+W+ T LNFT ++S A+I IGF++ DG D A+G + +++
Sbjct: 177 FSRAFTRWAEVTP-LNFTRSESILRADIVIGFFSGEHGDGEPFDGAMG---TLAHASSPP 232
Query: 247 SGFITLDATKYWALPTEHRG---------FDLETAAMHQIGHLLGLEHSSDNKSIMYPTI 297
+G + LD + W + DLE+ A+H+IGHLLGL HSS +IM+P I
Sbjct: 233 TGMLHLDGDEDWLISNGEISRRILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAI 292
Query: 298 LPSHQKNVQITDSDNLAIQKLYSSSTKANANSDDSSGCFKLFGSSS-----SLLISLSIV 352
+K V++ D IQ LY + + S + G S +ISLS +
Sbjct: 293 SGGDRK-VELAKDDIEGIQHLYGGNPNGDGGGSKPSRESQSTGGDSVRRWRGWMISLSSI 351
Query: 353 FAFVALLN 360
+ L++
Sbjct: 352 ATCIFLIS 359
>gb|AAP68221.1| At2g45040 [Arabidopsis thaliana] gi|26452204|dbj|BAC43190.1|
putative metalloproteinase [Arabidopsis thaliana]
gi|4895247|gb|AAD32832.1| putative metalloproteinase
[Arabidopsis thaliana] gi|25408919|pir||G84885 probable
metalloproteinase [imported] - Arabidopsis thaliana
gi|15225398|ref|NP_182030.1| matrix metalloproteinase
[Arabidopsis thaliana]
Length = 342
Score = 120 bits (301), Expect = 6e-26
Identities = 86/267 (32%), Positives = 133/267 (49%), Gaps = 30/267 (11%)
Query: 82 VDQIKQYLSDFGYLEQSGPFNNTLDQETVLALKTYQRYFNI------QQDTLSEILQHIA 135
+ +IK++L +GYL Q+ ++ ++ AL YQ+ + DTLS+IL
Sbjct: 50 IPEIKRHLQQYGYLPQNKESDDVSFEQ---ALVRYQKNLGLPITGKPDSDTLSQIL---- 102
Query: 136 LPRCGVPDRILK-----YNLTNDISFPKGNQWFPKGTKNLTYGFDPRNKIPL----DMTN 186
LPRCG PD + + + FP +W LTY F N P D+
Sbjct: 103 LPRCGFPDDVEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRR 162
Query: 187 VFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTNVK 246
VFR A +W++ V +F ET+ Y A+IKIGF+N D G + G ++ + + +
Sbjct: 163 VFRRAFGKWASVIPV-SFIETEDYVIADIKIGFFN--GDHGDGEPFDGVLGVLAHTFSPE 219
Query: 247 SGFITLDATKYWALPTEHR----GFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQ 302
+G + LD + WA+ + DLE+ A+H+IGH+LGL HSS + MYPT+ P
Sbjct: 220 NGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKP-RS 278
Query: 303 KNVQITDSDNLAIQKLYSSSTKANANS 329
K V + D + +Q LY ++ NS
Sbjct: 279 KKVNLNMDDVVGVQSLYGTNPNFTLNS 305
>ref|XP_467714.1| putative zinc metalloproteinase [Oryza sativa (japonica
cultivar-group)] gi|46390313|dbj|BAD15762.1| putative
zinc metalloproteinase [Oryza sativa (japonica
cultivar-group)]
Length = 372
Score = 118 bits (296), Expect = 2e-25
Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 35/272 (12%)
Query: 80 KGVDQIKQYLSDFGYLE---QSGPFNNTLDQETVLALKTYQRYF--NIQQDTLSEILQHI 134
+G+ ++K YLS FGYL S P+++ D A+ YQR F N + ++ + +
Sbjct: 60 EGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNFGLNATGELDTDTVDQM 119
Query: 135 ALPRCGVPDRILKYNLTNDIS--------------FPKGNQWFPKGTKNLTYGFDPRNKI 180
PRCGV D ++ T D + FP G W P +NL Y +
Sbjct: 120 VAPRCGVAD-VINGTSTMDRNSSAAALRGRHLYSYFPGGPMW-PPFRRNLRYAITATSAT 177
Query: 181 PLD---MTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTF 237
+D ++ VF A ++W+ TR L FTE S +A+I IGFY+ D G + G
Sbjct: 178 SIDRATLSAVFARAFSRWAAATR-LQFTEVSSASNADITIGFYS--GDHGDGEAFDGPLG 234
Query: 238 IVLDSTNVKSGFITLDATKYWALPTE-------HRGFDLETAAMHQIGHLLGLEHSSDNK 290
+ + + G LDA + W + DLE+ A+H+IGHLLGL HSS
Sbjct: 235 TLAHAFSPTDGRFHLDAAEAWVASGDVSTSSSFGTAVDLESVAVHEIGHLLGLGHSSVPD 294
Query: 291 SIMYPTILPSHQKNVQITDSDNLAIQKLYSSS 322
SIMYPTI +K V + D L IQ LY ++
Sbjct: 295 SIMYPTIRTGTRK-VDLESDDVLGIQSLYGTN 325
>dbj|BAD37908.1| putative metalloproteinase [Oryza sativa (japonica cultivar-group)]
gi|51535159|dbj|BAD37871.1| putative metalloproteinase
[Oryza sativa (japonica cultivar-group)]
Length = 371
Score = 118 bits (296), Expect = 2e-25
Identities = 100/320 (31%), Positives = 148/320 (46%), Gaps = 55/320 (17%)
Query: 80 KGVDQIKQYLSDFGYLEQ------SGPFNNTLDQETVLALKTYQRYF--NIQQDTLSEIL 131
+G+ ++K YL FGYL S FN+ D + LA+K YQ F ++ D + +
Sbjct: 60 QGLGKLKDYLWHFGYLSYPSSSSLSPSFNDLFDADMELAIKMYQGNFGLDVTGDLDAATV 119
Query: 132 QHIALPRCGVPDRILKYNLTNDIS-------------FPKGNQWFPKGTKNLTYGFDPRN 178
+ PRCGV D + N T+ + FP +W P+ L Y +
Sbjct: 120 SQMMAPRCGVADVV---NGTSTMGGGGGVRGRGLYSYFPGSPRW-PRSRTTLRYAITATS 175
Query: 179 KIPLD---MTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDG-INDVAVG 234
+ +D ++ VF +A +WS T LNFTE S DA+I IGFY DG D +G
Sbjct: 176 QTSIDRATLSKVFASAFARWSAAT-TLNFTEAASAADADITIGFYGGDHGDGEAFDGPLG 234
Query: 235 FTFIVLDSTNVKSGFITLDATKYWAL------PTEHRGFDLETAAMHQIGHLLGLEHSSD 288
TN G + LDA++ W + + DLE+ A+H+IGH+LGL HSS
Sbjct: 235 TLAHAFSPTN---GRLHLDASEAWVAGGDVTRASSNAAVDLESVAVHEIGHILGLGHSSA 291
Query: 289 NKSIMYPTILPSHQKNVQITDSDNLAIQKLYSSSTK--------ANANSDDSSGC----- 335
SIM+PT L S K V + D IQ LY ++ ++ DS+G
Sbjct: 292 ADSIMFPT-LTSRTKKVNLATDDVAGIQGLYGNNPNFKGVTPPATSSREMDSAGAGELSR 350
Query: 336 --FKLFGSSSSLLISLSIVF 353
+L ++ LL+ LS+ +
Sbjct: 351 PWRRLLDGAAGLLVGLSLAW 370
>gb|AAP54980.1| putative metalloproteinase [Oryza sativa (japonica cultivar-group)]
gi|37536782|ref|NP_922693.1| putative metalloproteinase
[Oryza sativa (japonica cultivar-group)]
gi|14165321|gb|AAK55453.1| putative metalloproteinase
[Oryza sativa (japonica cultivar-group)]
Length = 355
Score = 117 bits (293), Expect = 5e-25
Identities = 92/306 (30%), Positives = 158/306 (51%), Gaps = 42/306 (13%)
Query: 81 GVDQIKQYLSDFGYLEQSG-PFNNTLDQETVLALKTYQRYFNIQQDTLSE--ILQHIALP 137
G+ ++K+YL+ FGY+ + G + D+ +A++ YQ F++ + L I P
Sbjct: 53 GLAELKRYLARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLDQIMSP 112
Query: 138 RCGVPDRILKYNLTNDIS------------FPKGNQWFPKGTKN-----LTYGFDPRNKI 180
RCGV D ++ ++ +S F KG P+ T++ L+Y P +
Sbjct: 113 RCGVGDDDVERPVSVALSPGAQGGVVSRFTFFKGE---PRWTRSDPPIVLSYAVSPTATV 169
Query: 181 ----PLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGIN-DVAVGF 235
P + VF+ A +W+ T V F ET Y+ A+IK+GFY DG+ D +G
Sbjct: 170 GYLPPAAVRAVFQRAFARWARTIPV-GFVETDDYEAADIKVGFYAGNHGDGVPFDGPLG- 227
Query: 236 TFIVLDSTNVKSGFITLDATKYWALPTE----HRGFDLETAAMHQIGHLLGLEHSSDNKS 291
I+ + + K+G + LDA+++WA+ + DLE+ A H+IGH+LGL HS+ ++
Sbjct: 228 --ILGHAFSPKNGRLHLDASEHWAVDFDVDATASAIDLESVATHEIGHVLGLGHSASPRA 285
Query: 292 IMYPTILPSHQKNVQITDSDNLAIQKLYSSSTKANANS-----DDSSGCFKLFGSSSSLL 346
+MYP+I P +K V++T D +Q LY S+ + + +S SS +L S+ LL
Sbjct: 286 VMYPSIKP-REKKVRLTVDDVEGVQALYGSNPQFSLSSLSEQGTSSSSPRRLLAGSARLL 344
Query: 347 ISLSIV 352
++ ++
Sbjct: 345 CTVLVI 350
>gb|AAC31167.1| metalloproteinase [Arabidopsis thaliana] gi|25455788|pir||T51957
metalloproteinase (EC 3.4.24.-) [imported] - Arabidopsis
thaliana
Length = 341
Score = 117 bits (293), Expect = 5e-25
Identities = 87/266 (32%), Positives = 134/266 (49%), Gaps = 29/266 (10%)
Query: 82 VDQIKQYLSDFGYLEQSGPFNNTLDQETVLALKTYQRYFNI------QQDTLSEILQHIA 135
+ +IK++L +GYL Q+ ++ ++ AL YQ+ + DTLS+IL
Sbjct: 50 IPEIKRHLQQYGYLPQNKESDDVSFEQ---ALVRYQKNLGLPITGKPDSDTLSQIL---- 102
Query: 136 LPRCGVPDRILK-----YNLTNDISFPKGNQWFPKGTKNLTYGFDPRNKIP-LDMTN--V 187
LPRCG PD + + + FP +W LTY F N P L T+ V
Sbjct: 103 LPRCGFPDDVEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRV 162
Query: 188 FRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTNVKS 247
FR A +W++ V +F ET+ Y A+IKIGF+N D G + G ++ + + ++
Sbjct: 163 FRRAFGEWASVIPV-SFIETEDYVIADIKIGFFN--GDHGDGEPFDGVLGVLAHTFSPEN 219
Query: 248 GFITLDATKYWALPTEHR----GFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQK 303
G + LD + WA+ + DLE+ A+H+IGH+LGL HSS + MYPT+ P K
Sbjct: 220 GRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKP-RSK 278
Query: 304 NVQITDSDNLAIQKLYSSSTKANANS 329
V + D + +Q LY ++ NS
Sbjct: 279 KVNLNMDDVVGVQSLYGTNPNFTLNS 304
>emb|CAB10439.1| proteinase like protein [Arabidopsis thaliana]
gi|7268414|emb|CAB78706.1| proteinase like protein
[Arabidopsis thaliana] gi|7488133|pir||E71433 probable
metalloproteinase (EC 3.4.24.-) - Arabidopsis thaliana
gi|15235820|ref|NP_193397.1| matrix metalloproteinase,
putative [Arabidopsis thaliana]
Length = 364
Score = 114 bits (284), Expect = 6e-24
Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 27/268 (10%)
Query: 81 GVDQIKQYLSDFGYLEQSGP-FNNTLDQETVLALKTYQRYFNI----QQDTLSEILQHIA 135
GV ++K+YL FGY+ F++ D A+ YQ + + DT + L ++
Sbjct: 69 GVSELKRYLHRFGYVNDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTSTVTL--MS 126
Query: 136 LPRCGVPDRILKYNLTNDISFPKGNQWF----PKGTKN-LTYGFDPRNKIPL----DMTN 186
LPRCGV D + N ND + + PK ++ LTY +K+ D+
Sbjct: 127 LPRCGVSDTHMTIN--NDFLHTTAHYTYFNGKPKWNRDTLTYAISKTHKLDYLTSEDVKT 184
Query: 187 VFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTNVK 246
VFR A +QWS+ V +F E + A++KIGFY DG+ V T + + +
Sbjct: 185 VFRRAFSQWSSVIPV-SFEEVDDFTTADLKIGFYAGDHGDGLPFDGVLGT--LAHAFAPE 241
Query: 247 SGFITLDATKYWALPTEHRG-----FDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSH 301
+G + LDA + W + + +G DLE+ A H+IGHLLGL HSS ++MYP++ P
Sbjct: 242 NGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRP-R 300
Query: 302 QKNVQITDSDNLAIQKLYSSSTKANANS 329
K V +T D + KLY + K +S
Sbjct: 301 TKKVDLTVDDVAGVLKLYGPNPKLRLDS 328
>gb|AAM62476.1| proteinase like protein [Arabidopsis thaliana]
Length = 364
Score = 114 bits (284), Expect = 6e-24
Identities = 87/268 (32%), Positives = 134/268 (49%), Gaps = 27/268 (10%)
Query: 81 GVDQIKQYLSDFGYLEQSGP-FNNTLDQETVLALKTYQRYFNI----QQDTLSEILQHIA 135
GV ++K+YL FGY++ F++ D A+ YQ + + DT + L ++
Sbjct: 69 GVSELKRYLHRFGYVKDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTSTVTL--MS 126
Query: 136 LPRCGVPDRILKYNLTNDISFPKGNQWF----PKGTKN-LTYGFDPRNKIPL----DMTN 186
LPRCGV D + N ND + + PK ++ LTY +K+ D+
Sbjct: 127 LPRCGVXDTHMTIN--NDFLHTTAHYTYFNGKPKWNRDTLTYAISKTHKLDYLTSEDVKT 184
Query: 187 VFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTNVK 246
VFR A +QWS+ V +F E + A++KIGFY DG+ V T + + +
Sbjct: 185 VFRRAFSQWSSVIPV-SFEEVDDFTTADLKIGFYAGDHGDGLPFDGVLGT--LAHAFAPE 241
Query: 247 SGFITLDATKYWALPTEHRG-----FDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSH 301
+G + LDA + W + + +G DLE+ A H+IGHLLGL HSS ++MYP++ P
Sbjct: 242 NGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRP-R 300
Query: 302 QKNVQITDSDNLAIQKLYSSSTKANANS 329
K V +T D + KLY + K +S
Sbjct: 301 TKKVDLTVDDVAGVLKLYGPNPKLRLDS 328
>gb|AAO42162.1| putative proteinase [Arabidopsis thaliana]
Length = 364
Score = 114 bits (284), Expect = 6e-24
Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 27/268 (10%)
Query: 81 GVDQIKQYLSDFGYLEQSGP-FNNTLDQETVLALKTYQRYFNI----QQDTLSEILQHIA 135
GV ++K+YL FGY+ F++ D A+ YQ + + DT + L ++
Sbjct: 69 GVSELKRYLHRFGYVNDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTSTVTL--MS 126
Query: 136 LPRCGVPDRILKYNLTNDISFPKGNQWF----PKGTKN-LTYGFDPRNKIPL----DMTN 186
LPRCGV D + N ND + + PK ++ LTY +K+ D+
Sbjct: 127 LPRCGVSDTHMTIN--NDFLHTTAHYTYFNGKPKWNRDTLTYAISKTHKLDYLTSEDVKT 184
Query: 187 VFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTNVK 246
VFR A +QWS+ V +F E + A++KIGFY DG+ V T + + +
Sbjct: 185 VFRRAFSQWSSVIPV-SFEEVDDFTTADLKIGFYAGDHGDGLPFDGVLGT--LAHAFAPE 241
Query: 247 SGFITLDATKYWALPTEHRG-----FDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSH 301
+G + LDA + W + + +G DLE+ A H+IGHLLGL HSS ++MYP++ P
Sbjct: 242 NGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRP-R 300
Query: 302 QKNVQITDSDNLAIQKLYSSSTKANANS 329
K V +T D + KLY + K +S
Sbjct: 301 TKKVDLTVDDVAGVLKLYGPNPKLRLDS 328
>emb|CAB76364.1| matrix metalloproteinase [Cucumis sativus]
Length = 320
Score = 111 bits (278), Expect = 3e-23
Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 32/265 (12%)
Query: 80 KGVDQIKQYLSDFGYL-----EQSGP-FNNTLDQETVLALKTYQRYFNIQQDTL--SEIL 131
+G+ QIK+YL FGY+ + S P F++T D ALKTYQ N+ + S +
Sbjct: 61 QGIHQIKKYLQRFGYITTNIQKHSNPIFDDTFDHILESALKTYQTNHNLAPSGILDSNTI 120
Query: 132 QHIALPRCGVPDRILK-------YNLTND----------ISFPKGNQWFPKGTKNLTYGF 174
IA+PRCGV D I N TN+ +F +GN +P +L+YGF
Sbjct: 121 AQIAMPRCGVQDVIKNKKTKKRNQNFTNNGHTHFHKVSHFTFFEGNLKWPSSKLHLSYGF 180
Query: 175 DPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVG 234
P P+D A ++WS T F+ Y A+IKI F + G N G
Sbjct: 181 LPN--YPIDAIKPVSRAFSKWSLNTH-FKFSHVADYRKADIKISFER--GEHGDNAPFDG 235
Query: 235 FTFIVLDSTNVKSGFITLDATKYWALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMY 294
++ + G + D W++ FD+ET A+H+IGH+LGL+HS+ ++IM+
Sbjct: 236 VGGVLAHAYAPTDGRLHFDGDDAWSVGAISGYFDVETVALHEIGHILGLQHSTIEEAIMF 295
Query: 295 PTILPSHQKNVQITDSDNLAIQKLY 319
P+I K + D I+ LY
Sbjct: 296 PSIPEGVTKGLH--GDDIAGIKALY 318
>prf||1905425A metalloprotease
Length = 171
Score = 86.3 bits (212), Expect = 1e-15
Identities = 59/165 (35%), Positives = 81/165 (48%), Gaps = 20/165 (12%)
Query: 166 GTKNLTYGFDPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDD 225
GT LTY F P ++ + A ++W+ + F ET SY+ ANIKI F +
Sbjct: 13 GTTQLTYAFSPEPRLDDTFKSAIARAFSKWTPVVNIA-FQETTSYETANIKILFASKNHG 71
Query: 226 D-----GINDVAVGFTFIVLDSTNVKSGFITLDATKYWALPTE------HRGFDLETAAM 274
D G + +G F D G DA +YW + FDLE+ A+
Sbjct: 72 DPYPFDGPGGI-LGHAFAPTD------GRCHFDADEYWVASGDVTKSPVTSAFDLESVAV 124
Query: 275 HQIGHLLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNLAIQKLY 319
H+IGHLLGL HSSD ++IMYP+I P + V + D I+KLY
Sbjct: 125 HEIGHLLGLGHSSDLRAIMYPSI-PPRTRKVNLAQDDIDGIRKLY 168
>gb|EAL26300.1| GA18484-PA [Drosophila pseudoobscura]
Length = 603
Score = 83.2 bits (204), Expect = 1e-14
Identities = 79/248 (31%), Positives = 115/248 (45%), Gaps = 16/248 (6%)
Query: 84 QIKQYLSDFGYLEQSG--PFNNTL-DQETVL-ALKTYQRY--FNIQQDTLSEILQHIALP 137
Q + YLS FGYL S P N+ L D+ T L A++ +Q + NI + E L+ ++LP
Sbjct: 49 QAEMYLSQFGYLPASARNPANSGLQDKSTWLNAIQEFQNFAGLNITGELDDETLKLMSLP 108
Query: 138 RCGVPDRILKYNLTNDISFPKGNQWFPKGTKNLTYGFD--PRNKIPLDMTNVFRTALTQW 195
RCGV DR+ + + +G++W KNLTY P+ +D+ A W
Sbjct: 109 RCGVRDRVGTGDSRSKRYALQGSRW---RVKNLTYKVSKYPKRLKRVDVDAEIGRAFAVW 165
Query: 196 SNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTNVKSGFITLDAT 255
S T L FT+ K+ +I+I F DG G T + V G D
Sbjct: 166 SEDTD-LTFTK-KTTGPVHIEIKFVESEHGDGDAFDGQGGT-LAHAFFPVFGGDAHFDDA 222
Query: 256 KYWALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNLAI 315
+ W + + RG +L A H+ GH LGL HS + ++M P + ++ D D AI
Sbjct: 223 ELWTIGSP-RGTNLFQVAAHEFGHSLGLSHSDQSSALMAP-FYRGFEPVFRLDDDDKAAI 280
Query: 316 QKLYSSST 323
Q LY T
Sbjct: 281 QSLYGKKT 288
>gb|AAG00603.1| matrix metalloproteinase-26 [Homo sapiens]
gi|9022385|gb|AAF82359.1| matrix metalloproteinase-26
precursor [Homo sapiens] gi|11141873|ref|NP_068573.1|
matrix metalloproteinase 26 preproprotein [Homo sapiens]
Length = 261
Score = 82.8 bits (203), Expect = 1e-14
Identities = 71/251 (28%), Positives = 110/251 (43%), Gaps = 20/251 (7%)
Query: 79 YKGVDQIKQYLSDFGYLEQSGPFNNTLDQETVLALKTYQRYFNIQQDTLSEILQHIAL-- 136
+KG D ++ Y F E+ P L QET L + F+ L ++ H L
Sbjct: 26 HKGWDFVEGYFHQFFLTEKESPL---LTQETQTQLL---QQFHRNGTDLLDMQMHALLHQ 79
Query: 137 PRCGVPDRILKYNLTNDISFPKGNQWFPKGTKNLTYGFDPRNKIPLDMTNVFRTALTQWS 196
P CGVPD +D S G + K T P + P + + A++ WS
Sbjct: 80 PHCGVPDG-------SDTSISPGRCKWNKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWS 132
Query: 197 NTTRVLNFTETKSYDDANIKIGFYNITDDDGIN-DVAVGFTFIVLDSTNVKSGFITLDAT 255
N T ++ F + ++ DA+IK+ F+ +DG D G + G + D
Sbjct: 133 NVTPLI-FQQVQN-GDADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKN 190
Query: 256 KYWALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNLAI 315
++W+ G++L A H+IGH LGL+HS + SIMYPT + Q++ D I
Sbjct: 191 EHWS--ASDTGYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRI 248
Query: 316 QKLYSSSTKAN 326
Q LY ++
Sbjct: 249 QHLYGEKCSSD 259
>gb|AAP54983.1| putative metalloproteinase [Oryza sativa (japonica cultivar-group)]
gi|37536788|ref|NP_922696.1| putative metalloproteinase
[Oryza sativa (japonica cultivar-group)]
gi|14165330|gb|AAK55462.1| putative metalloproteinase
[Oryza sativa (japonica cultivar-group)]
Length = 289
Score = 82.4 bits (202), Expect = 2e-14
Identities = 62/188 (32%), Positives = 88/188 (45%), Gaps = 26/188 (13%)
Query: 156 FPKGNQWFPKGTKNLTYGFDPRNKI----PLDMTNVFRTALTQWSNTTRVLNFTETKSYD 211
FP +W + + LTY P P + R+A +W++ + F E + YD
Sbjct: 48 FPGKPRW-TRPDRVLTYAVSPTATADHLPPSAVRAALRSAFARWADVIP-MRFLEAERYD 105
Query: 212 DANIKIGFYNITD-------------DDGINDVAVGFTFIVLDSTNVKSGFITLDATKYW 258
A+IK+GFY TD DD D G + S KSG I L A W
Sbjct: 106 AADIKVGFYLYTDGRCDGCACIDSDDDDDDGDDCEGV--LAHSSMPEKSGQIHLHAAHRW 163
Query: 259 ----ALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNLA 314
A T DLE+ A H+IGH+LGL+HSS S+MYP + ++ V++T D
Sbjct: 164 TVNLAADTAPLAVDLESVAAHEIGHVLGLDHSSSRSSMMYP-FISCRERKVRLTTDDVHG 222
Query: 315 IQKLYSSS 322
IQ+LY ++
Sbjct: 223 IQELYGAN 230
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.135 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 596,495,426
Number of Sequences: 2540612
Number of extensions: 25760325
Number of successful extensions: 72569
Number of sequences better than 10.0: 578
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 71696
Number of HSP's gapped (non-prelim): 711
length of query: 360
length of database: 863,360,394
effective HSP length: 129
effective length of query: 231
effective length of database: 535,621,446
effective search space: 123728554026
effective search space used: 123728554026
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)
Medicago: description of AC144345.6