BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142498.2 + phase: 0 /pseudo
(193 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP40446.1| unknown protein [Arabidopsis thaliana] gi|1581048... 205 6e-52
emb|CAB87852.1| putative protein [Arabidopsis thaliana] gi|11357... 205 6e-52
gb|AAM91337.1| putative CCCH-type zinc finger protein [Arabidops... 196 3e-49
gb|AAM65365.1| AT5g58620/mzn1_70 [Arabidopsis thaliana] gi|88437... 183 3e-45
emb|CAB88249.1| zinc finger transcription factor-like protein [A... 159 3e-38
gb|AAM91291.1| zinc finger transcription factor-like protein [Ar... 159 3e-38
gb|AAM16218.1| At2g41900/T6D20.20 [Arabidopsis thaliana] gi|2019... 150 2e-35
pir||E84847 probable CCCH-type zinc finger protein [imported] - ... 150 2e-35
gb|AAU10743.1| putative finger transcription factor [Oryza sativ... 143 2e-33
ref|NP_911262.1| CCCH-type zinc finger protein-like protein [Ory... 138 7e-32
ref|XP_469392.1| unknown protein [Oryza sativa (japonica cultiva... 93 4e-18
emb|CAB87939.1| zinc finger transcription factor [Arabidopsis th... 68 1e-10
gb|AAQ56110.1| zing finger transcription factor PEI1 [Boechera d... 68 1e-10
gb|AAR13693.1| zinc finger transcription factor [Brassica oleracea] 67 3e-10
gb|AAQ56099.1| zing finger transcription factor PEI1 [Arabidopsi... 67 4e-10
gb|AAR15490.1| Zn-finger transcription factor [Arabidopsis arenosa] 67 4e-10
gb|AAR15441.1| Cu2+ plastocyanin-like [Arabidopsis arenosa] 67 4e-10
gb|AAR15427.1| Zn-finger transcription factor [Sisymbrium irio] 66 6e-10
gb|AAR15476.1| Zn-finger transcription factor [Olimarabidopsis p... 65 1e-09
gb|AAR15458.1| Zn-finger transcription factor [Capsella rubella] 64 2e-09
>gb|AAP40446.1| unknown protein [Arabidopsis thaliana] gi|15810487|gb|AAL07131.1|
unknown protein [Arabidopsis thaliana]
gi|18410398|ref|NP_567030.1| zinc finger (CCCH-type)
family protein [Arabidopsis thaliana]
Length = 580
Score = 205 bits (521), Expect = 6e-52
Identities = 107/210 (50%), Positives = 136/210 (63%), Gaps = 28/210 (13%)
Query: 10 LLELSAIDDIEAFKREVEEKGYDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIRVV 69
LLE +A DD+++FKREVEEKG D++E+G WYCR++GSKKM E+RTPLM+A+++GSI+V+
Sbjct: 30 LLEFAACDDLDSFKREVEEKGLDLDESGLWYCRRVGSKKMGLEERTPLMVAAMYGSIKVL 89
Query: 70 KYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDF--------LD 121
+I+ T +VN A G E VT LHCAVAG S + E++ +LLDA A V+ LD
Sbjct: 90 TFIVSTGKSDVNRACGEERVTPLHCAVAGCSVNMIEVINVLLDASALVNSVDANGNQPLD 149
Query: 122 EVVRQKLSVANSKELVAE--------------------KKDSGYAIDTSLPDINNGVFVT 161
VR VA+ + E K S Y D SLPDIN GV+ +
Sbjct: 150 VFVRVSRFVASPRRKAVELLLRGGGVGGLIDEAVEEEIKIVSKYPADASLPDINEGVYGS 209
Query: 162 DEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
DEFRMYSFKVK CSR Y+HDWTEC FVHPG
Sbjct: 210 DEFRMYSFKVKPCSRAYSHDWTECAFVHPG 239
>emb|CAB87852.1| putative protein [Arabidopsis thaliana] gi|11357692|pir||T49210
hypothetical protein F27K19.160 - Arabidopsis thaliana
Length = 586
Score = 205 bits (521), Expect = 6e-52
Identities = 107/210 (50%), Positives = 136/210 (63%), Gaps = 28/210 (13%)
Query: 10 LLELSAIDDIEAFKREVEEKGYDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIRVV 69
LLE +A DD+++FKREVEEKG D++E+G WYCR++GSKKM E+RTPLM+A+++GSI+V+
Sbjct: 36 LLEFAACDDLDSFKREVEEKGLDLDESGLWYCRRVGSKKMGLEERTPLMVAAMYGSIKVL 95
Query: 70 KYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDF--------LD 121
+I+ T +VN A G E VT LHCAVAG S + E++ +LLDA A V+ LD
Sbjct: 96 TFIVSTGKSDVNRACGEERVTPLHCAVAGCSVNMIEVINVLLDASALVNSVDANGNQPLD 155
Query: 122 EVVRQKLSVANSKELVAE--------------------KKDSGYAIDTSLPDINNGVFVT 161
VR VA+ + E K S Y D SLPDIN GV+ +
Sbjct: 156 VFVRVSRFVASPRRKAVELLLRGGGVGGLIDEAVEEEIKIVSKYPADASLPDINEGVYGS 215
Query: 162 DEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
DEFRMYSFKVK CSR Y+HDWTEC FVHPG
Sbjct: 216 DEFRMYSFKVKPCSRAYSHDWTECAFVHPG 245
>gb|AAM91337.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana]
gi|20260234|gb|AAM13015.1| putative CCCH-type zinc
finger protein [Arabidopsis thaliana]
gi|6598933|gb|AAF18728.1| putative CCCH-type zinc finger
protein [Arabidopsis thaliana] gi|4587989|gb|AAD25930.1|
hypothetical Cys-3-His zinc finger protein [Arabidopsis
thaliana] gi|15225637|ref|NP_181543.1| zinc finger
(CCCH-type) family protein [Arabidopsis thaliana]
gi|25370571|pir||G84825 probable CCCH-type zinc finger
protein [imported] - Arabidopsis thaliana
Length = 597
Score = 196 bits (498), Expect = 3e-49
Identities = 102/210 (48%), Positives = 135/210 (63%), Gaps = 28/210 (13%)
Query: 10 LLELSAIDDIEAFKREVEEK-GYDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIRV 68
LLE +A DD+ +FKRE+EE +++E+GFWYCR++GSKKM +E+RTPLM+A+++GS+ V
Sbjct: 33 LLEFAACDDLSSFKREIEENPSVEIDESGFWYCRRVGSKKMGFEERTPLMVAAMYGSMEV 92
Query: 69 VKYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDFLD------- 121
+ YII T +VN E VTALHCAV+G S S EI+K+LLDA A + +D
Sbjct: 93 LNYIIATGRSDVNRVCSDEKVTALHCAVSGCSVSIVEIIKILLDASASPNCVDANGNKPV 152
Query: 122 ------------------EVVRQKL--SVANSKELVAEKKDSGYAIDTSLPDINNGVFVT 161
EV+ + SV +E + + Y D SLPDIN GV+ T
Sbjct: 153 DLLAKDSRFVPNQSRKAVEVLLTGIHGSVMEEEEEELKSVVTKYPADASLPDINEGVYGT 212
Query: 162 DEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
D+FRM+SFKVK CSR Y+HDWTECPFVHPG
Sbjct: 213 DDFRMFSFKVKPCSRAYSHDWTECPFVHPG 242
>gb|AAM65365.1| AT5g58620/mzn1_70 [Arabidopsis thaliana] gi|8843784|dbj|BAA97332.1|
zinc finger transcription factor-like protein
[Arabidopsis thaliana] gi|15237721|ref|NP_200670.1| zinc
finger (CCCH-type) family protein [Arabidopsis thaliana]
gi|17064830|gb|AAL32569.1| zinc finger transcription
factor-like protein [Arabidopsis thaliana]
gi|15809818|gb|AAL06837.1| AT5g58620/mzn1_70
[Arabidopsis thaliana] gi|25083596|gb|AAN72094.1| zinc
finger transcription factor-like protein [Arabidopsis
thaliana]
Length = 607
Score = 183 bits (464), Expect = 3e-45
Identities = 105/226 (46%), Positives = 136/226 (59%), Gaps = 42/226 (18%)
Query: 8 STLLELSAIDDIEAFKREVEEKGYD-VNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSI 66
S LLE SA +D+ FK VEE+G + ++ +G WY R++GSKKM +E+RTPLMIA+LFGS
Sbjct: 12 SLLLESSACNDLSGFKSLVEEEGLESIDGSGLWYGRRLGSKKMGFEERTPLMIAALFGSK 71
Query: 67 RVVKYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDFLD----- 121
VV YII T +V+VN + GS+ TALHCAV+G S + EIV LLL A+ D D
Sbjct: 72 EVVDYIISTGLVDVNRSCGSDGATALHCAVSGLSANSLEIVTLLLKGSANPDSCDAYGNK 131
Query: 122 --EVVRQKLS-VANSKELVAEKKDSG---------------------------------Y 145
+V+ LS V +++ V E+ G Y
Sbjct: 132 PGDVIFPCLSPVFSARMKVLERLLKGNDDLNEVNGQEESEPEVEVEVEVSPPRGSERKEY 191
Query: 146 AIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
+D +LPDI NGV+ TDEFRMY+FK+K CSR Y+HDWTECPFVHPG
Sbjct: 192 PVDPTLPDIKNGVYGTDEFRMYAFKIKPCSRAYSHDWTECPFVHPG 237
>emb|CAB88249.1| zinc finger transcription factor-like protein [Arabidopsis
thaliana] gi|15239917|ref|NP_196789.1| zinc finger
(CCCH-type) family protein [Arabidopsis thaliana]
gi|11358930|pir||T49899 zinc finger transcription
factor-like protein - Arabidopsis thaliana
Length = 706
Score = 159 bits (403), Expect = 3e-38
Identities = 91/247 (36%), Positives = 132/247 (52%), Gaps = 64/247 (25%)
Query: 8 STLLELSAIDDIEAFKREVEEKGYDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIR 67
S LLE +A +D+E F+R++ + +N+ G WY R+ ++M E+RTPLM+ASL+GS+
Sbjct: 40 SALLEFAADNDVEGFRRQLSDVSC-INQMGLWYRRQRFVRRMVLEQRTPLMVASLYGSLD 98
Query: 68 VVKYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGAD----------- 116
VVK+I+ +N++ G + TALHCA +G S + ++VKLLL GAD
Sbjct: 99 VVKFILSFPEAELNLSCGPDKSTALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRP 158
Query: 117 VDFL-------------------DEVVRQKL-----SVANSKELVAEKKDSG-------- 144
VD L DE++ + L S+ +S ++ D+G
Sbjct: 159 VDVLVVSPHAPGLRTILEEILKKDEIISEDLHASSSSLGSSFRSLSSSPDNGSSLLSLDS 218
Query: 145 --------------------YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTE 184
Y ID SLPDI +G++ TDEFRM+SFK++ CSR Y+HDWTE
Sbjct: 219 VSSPTKPHGTDVTFASEKKEYPIDPSLPDIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTE 278
Query: 185 CPFVHPG 191
CPF HPG
Sbjct: 279 CPFAHPG 285
>gb|AAM91291.1| zinc finger transcription factor-like protein [Arabidopsis
thaliana] gi|20466590|gb|AAM20612.1| zinc finger
transcription factor-like protein [Arabidopsis thaliana]
Length = 706
Score = 159 bits (403), Expect = 3e-38
Identities = 91/247 (36%), Positives = 132/247 (52%), Gaps = 64/247 (25%)
Query: 8 STLLELSAIDDIEAFKREVEEKGYDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIR 67
S LLE +A +D+E F+R++ + +N+ G WY R+ ++M E+RTPLM+ASL+GS+
Sbjct: 40 SALLEFAADNDVEGFRRQLSDVSC-INQMGLWYRRQRFVRRMVLEQRTPLMVASLYGSLD 98
Query: 68 VVKYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGAD----------- 116
VVK+I+ +N++ G + TALHCA +G S + ++VKLLL GAD
Sbjct: 99 VVKFILSFPEAELNLSCGPDKSTALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRP 158
Query: 117 VDFL-------------------DEVVRQKL-----SVANSKELVAEKKDSG-------- 144
VD L DE++ + L S+ +S ++ D+G
Sbjct: 159 VDVLVVSPHAPGLRTILEEILKKDEIISEDLHASSSSLGSSFRSLSSSPDNGSSLLSLDS 218
Query: 145 --------------------YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTE 184
Y ID SLPDI +G++ TDEFRM+SFK++ CSR Y+HDWTE
Sbjct: 219 VSSPTKPHGTDVTFASEKKEYPIDPSLPDIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTE 278
Query: 185 CPFVHPG 191
CPF HPG
Sbjct: 279 CPFAHPG 285
>gb|AAM16218.1| At2g41900/T6D20.20 [Arabidopsis thaliana]
gi|20198317|gb|AAB63552.2| putative CCCH-type zinc
finger protein [Arabidopsis thaliana]
gi|14335106|gb|AAK59832.1| At2g41900/T6D20.20
[Arabidopsis thaliana] gi|18405834|ref|NP_565962.1| zinc
finger (CCCH-type) family protein [Arabidopsis thaliana]
Length = 716
Score = 150 bits (378), Expect = 2e-35
Identities = 91/244 (37%), Positives = 118/244 (48%), Gaps = 60/244 (24%)
Query: 8 STLLELSAIDDIEAFKREVEEKGYDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIR 67
++LLEL+A +D+E + +E V+EAG WY R+ GSK M + RTPLM+A+ +GSI
Sbjct: 46 ASLLELAANNDVEGVRLSIERDPSCVDEAGLWYGRQKGSKAMVNDYRTPLMVAATYGSID 105
Query: 68 VVKYIIETNMVNVNMAIGSENVTALHCAVAGGSKS------------------------- 102
V+K I+ +VN A G++ TALHCA +GG+ +
Sbjct: 106 VIKLIVSLTDADVNRACGNDQTTALHCAASGGAVNAIQVVKLLLAAGADLNLLDAEGQRA 165
Query: 103 --------KFEIVKLLLDAGADVDFLDEVVRQKLSVANSKEL--------VAEKKDSG-- 144
K E VKL+L D R V N E SG
Sbjct: 166 GDVIVVPPKLEGVKLMLQELLSADGSSTAERNLRVVTNVPNRSSSPCHSPTGENGGSGSG 225
Query: 145 -----------------YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPF 187
Y +D SLPDI N ++ TDEFRMYSFKV+ CSR Y+HDWTECPF
Sbjct: 226 SPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWTECPF 285
Query: 188 VHPG 191
VHPG
Sbjct: 286 VHPG 289
>pir||E84847 probable CCCH-type zinc finger protein [imported] - Arabidopsis
thaliana
Length = 727
Score = 150 bits (378), Expect = 2e-35
Identities = 91/244 (37%), Positives = 118/244 (48%), Gaps = 60/244 (24%)
Query: 8 STLLELSAIDDIEAFKREVEEKGYDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIR 67
++LLEL+A +D+E + +E V+EAG WY R+ GSK M + RTPLM+A+ +GSI
Sbjct: 57 ASLLELAANNDVEGVRLSIERDPSCVDEAGLWYGRQKGSKAMVNDYRTPLMVAATYGSID 116
Query: 68 VVKYIIETNMVNVNMAIGSENVTALHCAVAGGSKS------------------------- 102
V+K I+ +VN A G++ TALHCA +GG+ +
Sbjct: 117 VIKLIVSLTDADVNRACGNDQTTALHCAASGGAVNAIQVVKLLLAAGADLNLLDAEGQRA 176
Query: 103 --------KFEIVKLLLDAGADVDFLDEVVRQKLSVANSKEL--------VAEKKDSG-- 144
K E VKL+L D R V N E SG
Sbjct: 177 GDVIVVPPKLEGVKLMLQELLSADGSSTAERNLRVVTNVPNRSSSPCHSPTGENGGSGSG 236
Query: 145 -----------------YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPF 187
Y +D SLPDI N ++ TDEFRMYSFKV+ CSR Y+HDWTECPF
Sbjct: 237 SPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWTECPF 296
Query: 188 VHPG 191
VHPG
Sbjct: 297 VHPG 300
>gb|AAU10743.1| putative finger transcription factor [Oryza sativa (japonica
cultivar-group)]
Length = 601
Score = 143 bits (361), Expect = 2e-33
Identities = 84/215 (39%), Positives = 113/215 (52%), Gaps = 31/215 (14%)
Query: 8 STLLELSAIDDIEAFKREVEEKGYDVNEAGFWYCRKI-GSKKMCYEKRTPLMIASLFGSI 66
S LLEL+A DD+ A +R VEE+ + AG WY G ++ E+RT M+A+L+GS
Sbjct: 26 SLLLELAAADDVAAVRRVVEEEKVSLGVAGLWYGPSASGVARLGMERRTAAMVAALYGST 85
Query: 67 RVVKYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDFL------ 120
V+ Y++ A ++ T LH A AGG+ + +LLL AGA VD L
Sbjct: 86 GVLGYVVAAAPAEAARASETDGATPLHMAAAGGAANAVAATRLLLAAGASVDALSASGLR 145
Query: 121 -----------DEVVRQKLSVANSKELVAEKKDSG-------------YAIDTSLPDINN 156
++ +R L + KK + Y D +LPD+ +
Sbjct: 146 AGDLLPRATAAEKAIRLLLKSPAVSPSSSPKKSASPPSPPPPQEAKKEYPPDLTLPDLKS 205
Query: 157 GVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
G+F TDEFRMYSFKVK CSR Y+HDWTECPFVHPG
Sbjct: 206 GLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPG 240
>ref|NP_911262.1| CCCH-type zinc finger protein-like protein [Oryza sativa (japonica
cultivar-group)] gi|51963484|ref|XP_506415.1| PREDICTED
OJ1092_A07.129 gene product [Oryza sativa (japonica
cultivar-group)] gi|27817905|dbj|BAC55671.1| CCCH-type
zinc finger protein-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 657
Score = 138 bits (348), Expect = 7e-32
Identities = 87/243 (35%), Positives = 121/243 (48%), Gaps = 64/243 (26%)
Query: 8 STLLELSAIDDIEAFKREVEEKGYDVNE----AGFWYCRKIGSKKMCYEKRTPLMIASLF 63
+ LLEL+A DD++ + + E G + E G WY R YE RTPLM+A+ +
Sbjct: 25 AALLELAAADDVDGLRGALAEGGEEAAELADGVGLWYGRS-----KAYEARTPLMVAATY 79
Query: 64 GSIRVVKYIIETN-MVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDFLD- 121
GS VV ++ V+VN G++ TALHCA +GGS++ +VKLLL AGAD D
Sbjct: 80 GSAGVVSLLVGLGGCVDVNRRPGADGATALHCAASGGSRNAVAVVKLLLAAGADPATPDS 139
Query: 122 ----------------------EVV---RQKLSVANS----------------------- 133
EV+ R+ L+VA S
Sbjct: 140 AGRFPADVILAPPASPDALGDLEVLLGRRRALAVATSVASGSSSPPLSSSPDEGNRSPSS 199
Query: 134 -----KELVAEKKDSGYAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFV 188
+ ++ Y +D +LPDI + V+ +DEFRM++FKV+ CSR Y+HDWTECPFV
Sbjct: 200 RSSSLSPITVDRGKKEYPVDPTLPDIKSSVYASDEFRMFAFKVRPCSRAYSHDWTECPFV 259
Query: 189 HPG 191
HPG
Sbjct: 260 HPG 262
>ref|XP_469392.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|28273376|gb|AAO38462.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 749
Score = 93.2 bits (230), Expect = 4e-18
Identities = 53/113 (46%), Positives = 69/113 (60%), Gaps = 6/113 (5%)
Query: 10 LLELSAIDDIEAFKREVEEKG-YDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIRV 68
LLEL+A DD E +R +E +EAG WY R+ E RTPLM+A+ +GS+ V
Sbjct: 55 LLELAADDDAEGLRRALERAPPAAADEAGLWYGRR-----KVLEHRTPLMVAATYGSLAV 109
Query: 69 VKYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDFLD 121
++ ++ V+VN GS+ TALHCA +GGS S E VKLLL AGAD D D
Sbjct: 110 LRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATD 162
Score = 89.0 bits (219), Expect = 7e-17
Identities = 36/56 (64%), Positives = 46/56 (81%), Gaps = 2/56 (3%)
Query: 136 LVAEKKDSGYAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
+ +EKK+ Y +D SLPDI N ++ +DEFRMYSFK++ CSR Y+HDWTECPFVHPG
Sbjct: 241 VTSEKKE--YPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPG 294
>emb|CAB87939.1| zinc finger transcription factor [Arabidopsis thaliana]
gi|15240799|ref|NP_196367.1| zinc finger (CCCH-type)
family protein [Arabidopsis thaliana]
gi|11358929|pir||T49889 zinc finger transcription
factor, embryo-specific [validated] - Arabidopsis
thaliana gi|2961542|gb|AAC05744.1| zinc finger
transcription factor [Arabidopsis thaliana]
Length = 245
Score = 68.2 bits (165), Expect = 1e-10
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 145 YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
Y ID S+P+I++ ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 34 YEIDPSIPNIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 80
>gb|AAQ56110.1| zing finger transcription factor PEI1 [Boechera drummondii]
Length = 246
Score = 68.2 bits (165), Expect = 1e-10
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Query: 133 SKELVAEKKDSGYAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
SK +AE Y +D +P INN ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 26 SKPGIAE----AYDLDHPIPTINNAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 80
>gb|AAR13693.1| zinc finger transcription factor [Brassica oleracea]
Length = 246
Score = 67.0 bits (162), Expect = 3e-10
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 145 YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
Y ID LP +N+ ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 34 YEIDPPLPTVNDVIYSSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 80
>gb|AAQ56099.1| zing finger transcription factor PEI1 [Arabidopsis lyrata subsp.
lyrata]
Length = 246
Score = 66.6 bits (161), Expect = 4e-10
Identities = 26/57 (45%), Positives = 43/57 (74%), Gaps = 1/57 (1%)
Query: 136 LVAEKKDSG-YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
+V++ ++G Y ID +P+I++ ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 25 IVSKPGNAGAYEIDPPIPNIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 81
>gb|AAR15490.1| Zn-finger transcription factor [Arabidopsis arenosa]
Length = 247
Score = 66.6 bits (161), Expect = 4e-10
Identities = 26/57 (45%), Positives = 43/57 (74%), Gaps = 1/57 (1%)
Query: 136 LVAEKKDSG-YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
+V++ ++G Y ID +P+I++ ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 24 IVSKPGNAGAYEIDPPIPNIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 80
>gb|AAR15441.1| Cu2+ plastocyanin-like [Arabidopsis arenosa]
Length = 247
Score = 66.6 bits (161), Expect = 4e-10
Identities = 26/57 (45%), Positives = 43/57 (74%), Gaps = 1/57 (1%)
Query: 136 LVAEKKDSG-YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
+V++ ++G Y ID +P+I++ ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 24 IVSKPGNAGAYEIDPPIPNIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 80
>gb|AAR15427.1| Zn-finger transcription factor [Sisymbrium irio]
Length = 246
Score = 65.9 bits (159), Expect = 6e-10
Identities = 25/57 (43%), Positives = 42/57 (72%), Gaps = 1/57 (1%)
Query: 136 LVAEKKDSG-YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
+V++ ++G Y ID +P +++ ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 24 IVSKPGNAGAYEIDPPIPSVDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 80
>gb|AAR15476.1| Zn-finger transcription factor [Olimarabidopsis pumila]
Length = 246
Score = 65.1 bits (157), Expect = 1e-09
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 145 YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
Y ID +P I++ ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 34 YDIDPPIPTIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 80
>gb|AAR15458.1| Zn-finger transcription factor [Capsella rubella]
Length = 249
Score = 64.3 bits (155), Expect = 2e-09
Identities = 23/47 (48%), Positives = 35/47 (73%)
Query: 145 YAIDTSLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPG 191
Y +D +P I++ ++ +DEFRMY++K+K C R +HDWTECP+ H G
Sbjct: 36 YDLDPPIPTIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRG 82
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 309,494,275
Number of Sequences: 2540612
Number of extensions: 11578388
Number of successful extensions: 41464
Number of sequences better than 10.0: 974
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 934
Number of HSP's that attempted gapping in prelim test: 39768
Number of HSP's gapped (non-prelim): 2448
length of query: 193
length of database: 863,360,394
effective HSP length: 121
effective length of query: 72
effective length of database: 555,946,342
effective search space: 40028136624
effective search space used: 40028136624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)
Medicago: description of AC142498.2