BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142142.4 - phase: 0
(508 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA77373.1| PSII 47kD protein [Nicotiana tabacum] gi|2006835... 1043 0.0
dbj|BAA84411.1| PSII 47KDa protein [Arabidopsis thaliana] gi|752... 1042 0.0
dbj|BAB33222.1| PSII 47KDa protein [Lotus corniculatus var. japo... 1039 0.0
gb|AAD41884.1| photosystem II chlorophyll a-apoprotein [Pisum sa... 1038 0.0
prf||1612384A psbB gene 1038 0.0
ref|YP_086991.1| PSII 47kD protein [Panax ginseng] gi|51235338|g... 1037 0.0
emb|CAD28746.1| PSII 47KDa protein [Calycanthus floridus var. gl... 1036 0.0
emb|CAD45132.1| PSII 47KDa protein [Amborella trichopoda] gi|345... 1030 0.0
emb|CAA39388.1| unnamed protein product [Oenothera argillicola] ... 1030 0.0
emb|CAA39391.1| unnamed protein product [Oenothera elata subsp. ... 1029 0.0
emb|CAB88753.1| PSII 47kDa protein [Spinacia oleracea] gi|114975... 1028 0.0
emb|CAA60311.1| PSII 47KDa protein [Zea mays] gi|12435|emb|CAA28... 1026 0.0
emb|CAF28620.1| PSII 47KDa protein [Nymphaea alba] gi|50346809|r... 1026 0.0
emb|CAA67379.1| CP47 [Spinacia oleracea] 1026 0.0
ref|YP_052775.1| photosystem II 47 kDa protein [Oryza nivara] gi... 1025 0.0
gb|AAS46071.1| photosystem II 47 kDa protein; psbB [Oryza sativa... 1023 0.0
emb|CAA32264.1| chlorophyll a-binding protein [Hordeum vulgare s... 1022 0.0
dbj|BAD33053.1| photosystem II 47kDa protein _ chloroplast [Oryz... 1021 0.0
gb|AAQ09401.1| photosystem II cp47 protein [Pachysandra terminalis] 1020 0.0
gb|AAQ09373.1| photosystem II cp47 protein [Cornus mas] 1019 0.0
>emb|CAA77373.1| PSII 47kD protein [Nicotiana tabacum] gi|20068357|emb|CAC88070.1|
PSII 47kD protein [Atropa belladonna]
gi|28261743|ref|NP_783257.1| photosystem II 47 kDa
protein [Atropa belladonna] gi|11465984|ref|NP_054526.1|
photosystem II 47 kDa protein [Nicotiana tabacum]
gi|131276|sp|P06411|PSBB_TOBAC Photosystem II P680
chlorophyll A apoprotein (CP-47 protein)
gi|225224|prf||1211235BF photosystem II P680 apoprotein
Length = 508
Score = 1043 bits (2698), Expect = 0.0
Identities = 496/507 (97%), Positives = 504/507 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+ITGGT+TNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQA 507
GIDPDLDAQVEFGAFQKLGDPTTK+QA
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRQA 507
>dbj|BAA84411.1| PSII 47KDa protein [Arabidopsis thaliana]
gi|7525059|ref|NP_051084.1| photosystem II 47 kDa
protein [Arabidopsis thaliana]
gi|6685792|sp|P56777|PSBB_ARATH Photosystem II P680
chlorophyll A apoprotein (CP-47 protein)
Length = 508
Score = 1042 bits (2694), Expect = 0.0
Identities = 494/508 (97%), Positives = 505/508 (99%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLL+VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGWNITGGTITNPG+WSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGLWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AW+KIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FR+KEGRELFVRRMP
Sbjct: 301 AWAKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRNKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFGAFQKLGDPTTK+QAV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRQAV 508
>dbj|BAB33222.1| PSII 47KDa protein [Lotus corniculatus var. japonicus]
gi|13518464|ref|NP_084823.1| photosystem II 47 kDa
protein [Lotus corniculatus var. japonicus]
gi|23821992|sp|Q9BBQ8|PSBB_LOTJA Photosystem II P680
chlorophyll A apoprotein (CP-47 protein)
Length = 508
Score = 1039 bits (2686), Expect = 0.0
Identities = 493/508 (97%), Positives = 503/508 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLL+VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIF DERTGKPSLDLPKIFGIHLFLAG+ACFGFGAFHVTGL+GPGIWVSDPYGLTGRVQ
Sbjct: 121 EIFSDERTGKPSLDLPKIFGIHLFLAGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQP 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWGV+GFDPFVPGG+ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGVASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQS SE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSFSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHG+RTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGSRTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLD+QVEFGAFQKLGDPTT++Q V
Sbjct: 481 GIDPDLDSQVEFGAFQKLGDPTTRRQVV 508
>gb|AAD41884.1| photosystem II chlorophyll a-apoprotein [Pisum sativum]
Length = 507
Score = 1038 bits (2684), Expect = 0.0
Identities = 494/505 (97%), Positives = 500/505 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHW+YWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWLYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AG ENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGHVENQSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVR DVPFRRAESKYSVEQVGV VEF+GGELNGV+YSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRGDVPFRRAESKYSVEQVGVIVEFYGGELNGVTYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRD+FA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDLFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKK 505
GIDPDLDAQVEFGAFQKLGDPTT++
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTRR 505
>prf||1612384A psbB gene
Length = 507
Score = 1038 bits (2684), Expect = 0.0
Identities = 494/505 (97%), Positives = 500/505 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHW+YWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWLYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AG ENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGHVENQSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVR DVPFRRAESKYSVEQVGV VEF+GGELNGV+YSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRGDVPFRRAESKYSVEQVGVIVEFYGGELNGVTYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRD+FA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDLFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKK 505
GIDPDLDAQVEFGAFQKLGDPTT++
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTRR 505
>ref|YP_086991.1| PSII 47kD protein [Panax ginseng] gi|51235338|gb|AAT98534.1| PSII
47kD protein [Panax ginseng]
Length = 508
Score = 1037 bits (2682), Expect = 0.0
Identities = 494/508 (97%), Positives = 502/508 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW++TGG I NPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSVTGGAIPNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIF DERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQS
Sbjct: 121 EIFSDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQS 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFGAFQKLGDPTT++Q V
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTRRQVV 508
>emb|CAD28746.1| PSII 47KDa protein [Calycanthus floridus var. glaucus]
gi|32480868|ref|NP_862779.1| photosystem II 47 kDa
protein [Calycanthus floridus var. glaucus]
Length = 508
Score = 1036 bits (2679), Expect = 0.0
Identities = 491/508 (96%), Positives = 502/508 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+ITGGTITNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWG +GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENLSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEG ELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGHELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHA+FALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFGAFQKLGDPTT++Q V
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTRRQVV 508
>emb|CAD45132.1| PSII 47KDa protein [Amborella trichopoda]
gi|34500939|ref|NP_904124.1| PSII 47KDa protein
[Amborella trichopoda]
Length = 508
Score = 1030 bits (2664), Expect = 0.0
Identities = 486/508 (95%), Positives = 501/508 (97%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDP+LDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPILDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+ITGGT+TNPGIWSYEGVA AHIVFSGLCFLA+IWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLASIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQS
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQS 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWG +GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAF+VAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVG GLAEN SLSE
Sbjct: 241 SIAAVFFAAFIVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGTGLAENLSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIP+KLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEG ELFVRRMP
Sbjct: 301 AWSKIPDKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGHELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELN VSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNRVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFGAFQK+GDPTT++Q V
Sbjct: 481 GIDPDLDAQVEFGAFQKIGDPTTRRQIV 508
>emb|CAA39388.1| unnamed protein product [Oenothera argillicola]
gi|131270|sp|P19819|PSBB_OENAR Photosystem II P680
chlorophyll A apoprotein (CP-47 protein)
gi|100129|pir||S12132 photosystem II chlorophyll
a-binding protein psbB - Hooker's evening primrose
chloroplast
Length = 508
Score = 1030 bits (2662), Expect = 0.0
Identities = 488/508 (96%), Positives = 502/508 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLL+VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+ITGGT+TNPGIWSYEGVA +HI+FSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGSHILFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
IF DERTGKPSLDLPKIFGIHLFL+G+ACFGFGAFHVTGL+GPGIWVSDPYGLTG VQ
Sbjct: 121 AIFSDERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGEVQP 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLA+NQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAKNQSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMD+GDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDSGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLD QVEFGAFQKLGDPTT++QAV
Sbjct: 481 GIDPDLDTQVEFGAFQKLGDPTTRRQAV 508
>emb|CAA39391.1| unnamed protein product [Oenothera elata subsp. hookeri]
gi|6723776|emb|CAB67185.1| PSII P680 apoprotein (CP47)
[Oenothera elata subsp. hookeri]
gi|13518360|ref|NP_084719.1| photosystem II 47 kDa
protein [Oenothera elata subsp. hookeri]
gi|25167325|sp|Q9MTJ7|PSBB_OENHO Photosystem II P680
chlorophyll A apoprotein (CP-47 protein)
Length = 508
Score = 1029 bits (2661), Expect = 0.0
Identities = 487/508 (95%), Positives = 502/508 (97%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLL+VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+ITGGT+TNPGIWSYEGVA +HI+FSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGSHILFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
IF DERTGKPSLDLPKIFGIHLFL+G+ACFGFGAFHVTGL+GPGIWVSDPYGLTG VQ
Sbjct: 121 AIFSDERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGEVQP 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLA+NQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAKNQSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMD+GDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDSGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVT+EF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTIEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLD QVEFGAFQKLGDPTT++QAV
Sbjct: 481 GIDPDLDTQVEFGAFQKLGDPTTRRQAV 508
>emb|CAB88753.1| PSII 47kDa protein [Spinacia oleracea] gi|11497552|ref|NP_054960.1|
photosystem II 47 kDa protein [Spinacia oleracea]
gi|19855072|sp|P04160|PSBB_SPIOL Photosystem II P680
chlorophyll A apoprotein (CP-47 protein) (cp47 protein)
Length = 508
Score = 1028 bits (2657), Expect = 0.0
Identities = 486/508 (95%), Positives = 501/508 (97%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRL+SVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+ITGGTIT+PGIWSYEGVA AHI+FSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSITGGTITDPGIWSYEGVAGAHIMFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIF DERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ
Sbjct: 121 EIFSDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
V+PAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VSPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQS SE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSFSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVL+DGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLIDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHG+RTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGSRTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLD QVEFGAFQK+GDPTT++Q V
Sbjct: 481 GIDPDLDVQVEFGAFQKIGDPTTRRQGV 508
>emb|CAA60311.1| PSII 47KDa protein [Zea mays] gi|12435|emb|CAA28997.1| psbB [Zea
mays] gi|48478697|gb|AAT44717.1| photosystem II 47 kDa
protein [Saccharum hybrid cultivar SP-80-3280]
gi|50812553|ref|YP_054655.1| PSII 47kD protein
[Saccharum officinarum] gi|11467217|ref|NP_043049.1|
photosystem II 47 kDa protein [Zea mays]
gi|48478795|ref|YP_024402.1| photosystem II 47 kDa
protein [Saccharum hybrid cultivar SP-80-3280]
gi|131268|sp|P05641|PSBB_MAIZE Photosystem II P680
chlorophyll A apoprotein (CP-47 protein)
gi|49659537|dbj|BAD27318.1| PSII 47kD protein [Saccharum
officinarum]
Length = 508
Score = 1026 bits (2653), Expect = 0.0
Identities = 485/507 (95%), Positives = 500/507 (97%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+I+GGT+TNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ+
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQA 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWG +GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV GLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSDGLAENLSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVD +GIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDEEGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHA+FALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQA 507
GIDPDLDAQVEFG FQK+GDPTT++QA
Sbjct: 481 GIDPDLDAQVEFGTFQKVGDPTTRRQA 507
>emb|CAF28620.1| PSII 47KDa protein [Nymphaea alba] gi|50346809|ref|YP_053180.1|
PSII 47KDa protein [Nymphaea alba]
Length = 508
Score = 1026 bits (2652), Expect = 0.0
Identities = 484/508 (95%), Positives = 500/508 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+ITGGT+TNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNP+WG +GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYK LRMGNIETVLSS
Sbjct: 181 VNPSWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKALRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVNAGLAENLSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
+WSKIP+KLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEG ELFVRRMP
Sbjct: 301 SWSKIPDKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGHELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGEL+GVSY+DPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELDGVSYNDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFGAFQKLGDPTT++Q V
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTRRQVV 508
>emb|CAA67379.1| CP47 [Spinacia oleracea]
Length = 511
Score = 1026 bits (2652), Expect = 0.0
Identities = 485/507 (95%), Positives = 500/507 (97%)
Query: 2 GLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
GLPWYRVHTVVLNDPGRL+SVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF
Sbjct: 5 GLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 64
Query: 62 VIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDLE 121
VIPFMTRLGITNSWGGW+ITGGTIT+PGIWSYEGVA AHI+FSGLCFLAAIWHWVYWDLE
Sbjct: 65 VIPFMTRLGITNSWGGWSITGGTITDPGIWSYEGVAGAHIMFSGLCFLAAIWHWVYWDLE 124
Query: 122 IFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQSV 181
IF DERTGKPSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ V
Sbjct: 125 IFSDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPV 184
Query: 182 NPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSS 241
+PAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSS
Sbjct: 185 SPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSS 244
Query: 242 IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSEA 301
IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQS SEA
Sbjct: 245 IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSFSEA 304
Query: 302 WSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPT 361
WSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPT
Sbjct: 305 WSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPT 364
Query: 362 FFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKYA 421
FFETFPVVL+DGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKYA
Sbjct: 365 FFETFPVVLIDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYA 424
Query: 422 RRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAG 481
RRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHG+RTLFRDVFAG
Sbjct: 425 RRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGSRTLFRDVFAG 484
Query: 482 IDPDLDAQVEFGAFQKLGDPTTKKQAV 508
IDPDLD QVEFGAFQK+GDPTT++Q V
Sbjct: 485 IDPDLDVQVEFGAFQKIGDPTTRRQGV 511
>ref|YP_052775.1| photosystem II 47 kDa protein [Oryza nivara]
gi|49615021|dbj|BAD26804.1| photosystem II 47 kDa
protein [Oryza nivara]
Length = 508
Score = 1025 bits (2650), Expect = 0.0
Identities = 485/508 (95%), Positives = 500/508 (97%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+I+GGT+TNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ+
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQA 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWG +GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV GLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSDGLAENLSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVD +GIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDEEGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARR+QLGEIFELDRATLKSDGVFRSSPRGWFTFGHA+FALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFG FQK+GDPTT++Q V
Sbjct: 481 GIDPDLDAQVEFGTFQKVGDPTTRRQPV 508
>gb|AAS46071.1| photosystem II 47 kDa protein; psbB [Oryza sativa (indica
cultivar-group)]
Length = 508
Score = 1023 bits (2646), Expect = 0.0
Identities = 484/508 (95%), Positives = 499/508 (97%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+I+GGT+TNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ+
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQA 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNP WG +GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPVWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV GLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSDGLAENLSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVD +GIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDEEGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARR+QLGEIFELDRATLKSDGVFRSSPRGWFTFGHA+FALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFG FQK+GDPTT++Q V
Sbjct: 481 GIDPDLDAQVEFGTFQKVGDPTTRRQPV 508
>emb|CAA32264.1| chlorophyll a-binding protein [Hordeum vulgare subsp. vulgare]
gi|131267|sp|P10900|PSBB_HORVU Photosystem II P680
chlorophyll A apoprotein (CP-47 protein)
Length = 508
Score = 1022 bits (2642), Expect = 0.0
Identities = 484/508 (95%), Positives = 500/508 (98%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGIT+SWGGW+I+GGT+TNPGIWSYEGVAA HIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITDSWGGWSISGGTVTNPGIWSYEGVAATHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIF DERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ+
Sbjct: 121 EIFSDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQA 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWG +GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV GLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSNGLAENLSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVD +GIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGV+YSDPATVKKY
Sbjct: 361 TFFETFPVVLVDEEGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVNYSDPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARR+QLGEIFELDRATLKSDGVFRSSPRGWFTFGHA+FALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFG FQK+GDPTTKKQAV
Sbjct: 481 GIDPDLDAQVEFGTFQKVGDPTTKKQAV 508
>dbj|BAD33053.1| photosystem II 47kDa protein _ chloroplast [Oryza sativa (japonica
cultivar-group)] gi|50725459|dbj|BAD32930.1| photosystem
II 47kDa protein _ chloroplast [Oryza sativa (japonica
cultivar-group)]
Length = 508
Score = 1021 bits (2640), Expect = 0.0
Identities = 482/508 (94%), Positives = 499/508 (97%)
Query: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
MGLPWYRVHTVVLNDPGRLLSVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
Query: 61 FVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDL 120
FVIPFMTRLGITNSWGGW+I+GGT+TNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61 FVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQS 180
EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ+
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQA 180
Query: 181 VNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
VNPAWG +GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300
SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV GLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSDGLAENLSLSE 300
Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360
Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKY 420
TFFETFPVVLVD +GIVRADVPFRRAESKYSVEQVG+TVEF+GGELNGVSYS+PATVKKY
Sbjct: 361 TFFETFPVVLVDEEGIVRADVPFRRAESKYSVEQVGITVEFYGGELNGVSYSNPATVKKY 420
Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
ARR+QLGEIFELDRATLKSDGVFRSSPRGWFTFGH +FALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHTTFALLFFFGHIWHGARTLFRDVFA 480
Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKKQAV 508
GIDPDLDAQVEFG FQK+GDPTT++Q V
Sbjct: 481 GIDPDLDAQVEFGTFQKVGDPTTRRQPV 508
>gb|AAQ09401.1| photosystem II cp47 protein [Pachysandra terminalis]
Length = 498
Score = 1020 bits (2638), Expect = 0.0
Identities = 486/498 (97%), Positives = 495/498 (98%)
Query: 11 VVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLG 70
VVLNDPGRLL+VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLG
Sbjct: 1 VVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLG 60
Query: 71 ITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGK 130
ITNSWGGW+ITGGTITNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDLEIFCDERTGK
Sbjct: 61 ITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGK 120
Query: 131 PSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQSVNPAWGVDGF 190
PSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQSVNPAWGV+GF
Sbjct: 121 PSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGF 180
Query: 191 DPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAF 250
DPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAF
Sbjct: 181 DPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAF 240
Query: 251 VVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSEAWSKIPEKLA 310
VVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVG GLAENQSLSEAWSKIPEKLA
Sbjct: 241 VVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGVGLAENQSLSEAWSKIPEKLA 300
Query: 311 FYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVL 370
FYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVL
Sbjct: 301 FYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVL 360
Query: 371 VDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKYARRAQLGEIF 430
VDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKYARRAQLGEIF
Sbjct: 361 VDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIF 420
Query: 431 ELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQV 490
ELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQV
Sbjct: 421 ELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQV 480
Query: 491 EFGAFQKLGDPTTKKQAV 508
EFGAFQKLGDPTT++Q V
Sbjct: 481 EFGAFQKLGDPTTRRQVV 498
>gb|AAQ09373.1| photosystem II cp47 protein [Cornus mas]
Length = 498
Score = 1019 bits (2636), Expect = 0.0
Identities = 486/498 (97%), Positives = 494/498 (98%)
Query: 11 VVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLG 70
VVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLG
Sbjct: 1 VVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLG 60
Query: 71 ITNSWGGWNITGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGK 130
ITNSWGGW+ITGGTITNPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDLEIFCDERTGK
Sbjct: 61 ITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGK 120
Query: 131 PSLDLPKIFGIHLFLAGVACFGFGAFHVTGLFGPGIWVSDPYGLTGRVQSVNPAWGVDGF 190
PSLDLPKIFGIHLFL+GVACFGFGAFHVTGL+GPGIWVSDPYGLTG+VQ VNPAWGV+GF
Sbjct: 121 PSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGF 180
Query: 191 DPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAF 250
DPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAF
Sbjct: 181 DPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAF 240
Query: 251 VVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSEAWSKIPEKLA 310
VVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVG GLAENQSLSEAWSKIPEKLA
Sbjct: 241 VVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGVGLAENQSLSEAWSKIPEKLA 300
Query: 311 FYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVL 370
FYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVL
Sbjct: 301 FYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVL 360
Query: 371 VDGDGIVRADVPFRRAESKYSVEQVGVTVEFFGGELNGVSYSDPATVKKYARRAQLGEIF 430
VDGDGIVRADVPFRRAESKYSVEQVGVTVEF+GGELNGVSYSDPATVKKYARRAQLGEIF
Sbjct: 361 VDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIF 420
Query: 431 ELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQV 490
ELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQV
Sbjct: 421 ELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQV 480
Query: 491 EFGAFQKLGDPTTKKQAV 508
EFGAFQKLGDPTT++Q V
Sbjct: 481 EFGAFQKLGDPTTRRQVV 498
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.143 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 972,383,689
Number of Sequences: 2540612
Number of extensions: 45240290
Number of successful extensions: 129089
Number of sequences better than 10.0: 667
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 126970
Number of HSP's gapped (non-prelim): 1033
length of query: 508
length of database: 863,360,394
effective HSP length: 132
effective length of query: 376
effective length of database: 527,999,610
effective search space: 198527853360
effective search space used: 198527853360
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)
Medicago: description of AC142142.4