BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142142.2 + phase: 0
(119 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA84718.1| ribosomal protein L16 gi|1172974|sp|P42353|RK16_V... 224 5e-58
gb|AAN04889.1| ribosomal protein L16 [Vigna angularis] 223 8e-58
ref|YP_087003.1| ribosomal protein L16 [Panax ginseng] gi|512353... 221 3e-57
dbj|BAB33233.1| ribosomal protein L16 [Lotus corniculatus var. j... 221 4e-57
dbj|BAA84422.1| ribosomal protein L16 [Arabidopsis thaliana] gi|... 220 7e-57
emb|CAC88081.1| ribosomal protein L16 [Atropa belladonna] gi|282... 219 1e-56
emb|CAA77380.1| ribosomal protein L16 [Nicotiana tabacum] gi|114... 217 5e-56
emb|CAJ00796.1| ribosomal protein L16 [Cucumis sativus] 217 6e-56
emb|CAB67197.1| ribosomal protein L16 [Oenothera elata subsp. ho... 214 5e-55
dbj|BAD05009.1| ribosomal protein large subunit 16 [Scutellaria ... 214 5e-55
emb|CAB88765.1| ribosomal protein L16 [Spinacia oleracea] gi|114... 213 9e-55
dbj|BAD05007.1| ribosomal protein large subunit 16 [Scutellaria ... 213 1e-54
dbj|BAB72243.1| ribosomal protein large subunit 16 [Cistanche sa... 211 3e-54
emb|CAA33933.1| ribosomal protein L16 [Oryza sativa (japonica cu... 210 6e-54
dbj|BAC76874.1| ribosomal protein large subunit 16 [Papaver somn... 210 6e-54
emb|CAA31716.1| ribosomal protein L16 [Spinacia oleracea] gi|712... 209 1e-53
dbj|BAD04080.1| ribosomal protein large subunit 16 [Cistanche de... 209 1e-53
dbj|BAC76869.1| ribosomal protein large subunit 16 [Papaver brac... 209 1e-53
dbj|BAD04082.1| ribosomal protein large subunit 16 [Cistanche si... 209 1e-53
gb|AAS46146.1| ribosomal protein L16; rpl16 [Oryza sativa (japon... 209 1e-53
>gb|AAA84718.1| ribosomal protein L16 gi|1172974|sp|P42353|RK16_VIGUN Chloroplast
50S ribosomal protein L16 gi|7440878|pir||T09650
ribosomal protein L16 - Vigna unguiculata chloroplast
(fragment)
Length = 137
Score = 224 bits (570), Expect = 5e-58
Identities = 109/118 (92%), Positives = 114/118 (96%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG +YRGN I FG+YALQALEPAWITSRQIEAGRRAMSRNVRRGG+IWVRIFPDKPVTV
Sbjct: 19 MKGISYRGNNICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTV 78
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RPTETRMGSGKG PEYWVAVVKPGKILYEMGGVPENIARKAISIA+SKMPIRTQFI+S
Sbjct: 79 RPTETRMGSGKGFPEYWVAVVKPGKILYEMGGVPENIARKAISIASSKMPIRTQFIIS 136
>gb|AAN04889.1| ribosomal protein L16 [Vigna angularis]
Length = 136
Score = 223 bits (568), Expect = 8e-58
Identities = 109/118 (92%), Positives = 114/118 (96%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG +YRGN I FG+YALQALEPAWITSRQIEAGRRAMSRNVRRGG+IWVRIFPDKPVTV
Sbjct: 18 MKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTV 77
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RPTETRMGSGKG PEYWVAVVKPGKILYEMGGVPENIARKAISIA+SKMPIRTQFI+S
Sbjct: 78 RPTETRMGSGKGFPEYWVAVVKPGKILYEMGGVPENIARKAISIASSKMPIRTQFIIS 135
>ref|YP_087003.1| ribosomal protein L16 [Panax ginseng] gi|51235350|gb|AAT98546.1|
ribosomal protein L16 [Panax ginseng]
Length = 135
Score = 221 bits (563), Expect = 3e-57
Identities = 108/118 (91%), Positives = 113/118 (95%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG +YRGN ISFGKYALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVTV
Sbjct: 17 MKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTV 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RP ETRMGSGKGSPEYWVAVVKPG+ILYEMGGV ENIARKAISIA+SKMPIRTQFI+S
Sbjct: 77 RPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARKAISIASSKMPIRTQFIIS 134
>dbj|BAB33233.1| ribosomal protein L16 [Lotus corniculatus var. japonicus]
gi|13518475|ref|NP_084834.1| ribosomal protein L16
[Lotus corniculatus var. japonicus]
gi|23822033|sp|Q9BBP9|RK16_LOTJA Chloroplast 50S
ribosomal protein L16
Length = 135
Score = 221 bits (562), Expect = 4e-57
Identities = 108/118 (91%), Positives = 114/118 (96%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG ++RGN I FG+YALQALEPAWITSRQIEAGRRAMSRNVRRGG+IWVRIFPDKPVTV
Sbjct: 17 MKGISHRGNQICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTV 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RPTETRMGSGKGSPEYWVAVVKPGKI+YEMGGV ENIARKAISIAASKMPIRTQFI+S
Sbjct: 77 RPTETRMGSGKGSPEYWVAVVKPGKIVYEMGGVAENIARKAISIAASKMPIRTQFIIS 134
>dbj|BAA84422.1| ribosomal protein L16 [Arabidopsis thaliana]
gi|7525070|ref|NP_051095.1| ribosomal protein L16
[Arabidopsis thaliana] gi|6685863|sp|P56793|RK16_ARATH
Chloroplast 50S ribosomal protein L16
Length = 135
Score = 220 bits (560), Expect = 7e-57
Identities = 107/119 (89%), Positives = 113/119 (94%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
+KG + RGN I FG+YALQ LEPAWITSRQIEAGRRAM+RNVRRGGKIWVRIFPDKPVTV
Sbjct: 17 LKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTV 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILSE 119
RP ETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPI+TQFI+SE
Sbjct: 77 RPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 135
>emb|CAC88081.1| ribosomal protein L16 [Atropa belladonna]
gi|28261754|ref|NP_783268.1| ribosomal protein L16
[Atropa belladonna]
Length = 134
Score = 219 bits (558), Expect = 1e-56
Identities = 106/118 (89%), Positives = 113/118 (94%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG +YRGN ISFGKYALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVT+
Sbjct: 17 MKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTL 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RP ETRMGSGKGSPEYWVAVVKPG+ILYEMGGV ENIAR+AIS+AASKMPIRTQFI+S
Sbjct: 77 RPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISLAASKMPIRTQFIIS 134
>emb|CAA77380.1| ribosomal protein L16 [Nicotiana tabacum]
gi|11465994|ref|NP_054536.1| ribosomal protein L16
[Nicotiana tabacum] gi|71249|pir||R5NT16 ribosomal
protein L16 - common tobacco chloroplast
gi|132715|sp|P06384|RK16_TOBAC Chloroplast 50S ribosomal
protein L16 gi|225234|prf||1211235BR ribosomal protein
L16
Length = 134
Score = 217 bits (553), Expect = 5e-56
Identities = 105/118 (88%), Positives = 113/118 (94%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG ++RGN ISFGKYALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVT+
Sbjct: 17 MKGISHRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTL 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RP ETRMGSGKGSPEYWVAVVKPG+ILYEMGGV ENIAR+AIS+AASKMPIRTQFI+S
Sbjct: 77 RPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISLAASKMPIRTQFIIS 134
>emb|CAJ00796.1| ribosomal protein L16 [Cucumis sativus]
Length = 135
Score = 217 bits (552), Expect = 6e-56
Identities = 105/118 (88%), Positives = 112/118 (93%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG +YRGN+I FG+YA+QALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVT+
Sbjct: 17 MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTL 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RPTETRMGSGKGSPEYWVAVVKPG+ILYEM GV ENIARKAISIAASKMPIRTQFI S
Sbjct: 77 RPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENIARKAISIAASKMPIRTQFITS 134
>emb|CAB67197.1| ribosomal protein L16 [Oenothera elata subsp. hookeri]
gi|13518371|ref|NP_084730.1| ribosomal protein L16
[Oenothera elata subsp. hookeri]
Length = 135
Score = 214 bits (544), Expect = 5e-55
Identities = 104/118 (88%), Positives = 111/118 (93%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
M+G +YRGN I FGKYALQALEPAWITSRQIEAGRRAM+RNVRRGGK WVRIFPDKPVT+
Sbjct: 17 MRGISYRGNRICFGKYALQALEPAWITSRQIEAGRRAMTRNVRRGGKTWVRIFPDKPVTL 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
R ETRMGSGKG+PEYWVAVVKPG+ILYEMGGV ENIARKAISIAASKMPIRTQFI+S
Sbjct: 77 RAAETRMGSGKGNPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIIS 134
>dbj|BAD05009.1| ribosomal protein large subunit 16 [Scutellaria lateriflora]
gi|39748655|dbj|BAD05008.1| robosomal protein large
subunit 16 [Scutellaria indica]
gi|39748651|dbj|BAD05006.1| ribosomal protein large
subunit 16 [Scutellaria galericulata]
gi|39748649|dbj|BAD05005.1| ribosomal protein large
subunit 16 [Scutellaria baicalensis]
gi|39748647|dbj|BAD05004.1| ribosormal protein large
subunit 16 [Scutellaria altissima]
Length = 118
Score = 214 bits (544), Expect = 5e-55
Identities = 104/117 (88%), Positives = 110/117 (93%)
Query: 2 KGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTVR 61
KG +YRGN I FGKYALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVTVR
Sbjct: 1 KGISYRGNHICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVR 60
Query: 62 PTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
P ETRMGSGKGSPEYWVAVVKPG+ILYEMGGV ENIA++AI IAASKMPIRTQFI+S
Sbjct: 61 PAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIAKRAILIAASKMPIRTQFIIS 117
>emb|CAB88765.1| ribosomal protein L16 [Spinacia oleracea]
gi|11497564|ref|NP_054972.1| ribosomal protein L16
[Spinacia oleracea] gi|19856541|sp|P17353|RK16_SPIOL
Chloroplast 50S ribosomal protein L16 (Ribosomal protein
CS-L24)
Length = 135
Score = 213 bits (542), Expect = 9e-55
Identities = 102/118 (86%), Positives = 111/118 (93%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG +YRGN I FG+YALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVTV
Sbjct: 17 MKGISYRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTV 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RP ETRMGSGKGSPEYWVAVVKPG+ILYE+ GV ENIAR+A++IAASKMPIRTQFI+S
Sbjct: 77 RPAETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARRAVAIAASKMPIRTQFIIS 134
>dbj|BAD05007.1| ribosomal protein large subunit 16 [Scutellaria incana]
Length = 118
Score = 213 bits (541), Expect = 1e-54
Identities = 103/117 (88%), Positives = 110/117 (93%)
Query: 2 KGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTVR 61
KG +YRGN I FGKYALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVTVR
Sbjct: 1 KGISYRGNHICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVR 60
Query: 62 PTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
P ETR+GSGKGSPEYWVAVVKPG+ILYEMGGV ENIA++AI IAASKMPIRTQFI+S
Sbjct: 61 PAETRLGSGKGSPEYWVAVVKPGRILYEMGGVTENIAKRAILIAASKMPIRTQFIIS 117
>dbj|BAB72243.1| ribosomal protein large subunit 16 [Cistanche salsa]
Length = 118
Score = 211 bits (537), Expect = 3e-54
Identities = 103/117 (88%), Positives = 109/117 (93%)
Query: 2 KGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTVR 61
KG +YRGN ISFGKYALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKP+TVR
Sbjct: 1 KGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPITVR 60
Query: 62 PTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
P ETRMGSGKG PEYWVAVVKP +ILYEMGGV ENIAR+AI IAASKMPIRTQFI+S
Sbjct: 61 PAETRMGSGKGVPEYWVAVVKPERILYEMGGVTENIARRAILIAASKMPIRTQFIIS 117
>emb|CAA33933.1| ribosomal protein L16 [Oryza sativa (japonica cultivar-group)]
gi|11466827|ref|NP_039423.1| ribosomal protein L16
[Oryza sativa (japonica cultivar-group)]
gi|71250|pir||R5RZ16 ribosomal protein L16 - rice
chloroplast gi|132712|sp|P12138|RK16_ORYSA Chloroplast
50S ribosomal protein L16 gi|226645|prf||1603356BV
ribosomal protein L16
Length = 136
Score = 210 bits (535), Expect = 6e-54
Identities = 100/119 (84%), Positives = 110/119 (92%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKGK+YRGN I FG+YALQALEP WIT+RQIEAGRRAM+R RRGGKIWVRIFPDKPVT+
Sbjct: 17 MKGKSYRGNCICFGRYALQALEPTWITARQIEAGRRAMTRYARRGGKIWVRIFPDKPVTI 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILSE 119
RPTETRMGSGKGSPEYWVAVVKPG+ILYEMGGV E +AR+AISIAASKMPIR+QF+ E
Sbjct: 77 RPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVSETVARRAISIAASKMPIRSQFLRLE 135
>dbj|BAC76874.1| ribosomal protein large subunit 16 [Papaver somniferum]
gi|31076423|dbj|BAC76873.1| ribosomal protein large
subunit 16 [Papaver setigerum]
gi|31076421|dbj|BAC76872.1| ribosomal protein large
subunit 16 [Papaver rhoeas] gi|31076419|dbj|BAC76871.1|
ribosomal protein large subunit 16 [Papaver
pseudo-orientale] gi|31076417|dbj|BAC76870.1| ribosomal
protein large subunit 16 [Papaver orientale]
Length = 118
Score = 210 bits (535), Expect = 6e-54
Identities = 101/118 (85%), Positives = 112/118 (94%)
Query: 2 KGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTVR 61
KG +YRGN ISFG+YALQALEPAWITSRQIEAGRRAM+R RRGGKIWVRIFPDKPVT+R
Sbjct: 1 KGISYRGNHISFGRYALQALEPAWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTLR 60
Query: 62 PTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILSE 119
PTETRMGSGKGSPEYWV+VVKPG+ILYEMGGV E +AR+AISIAASKMPIRTQF+++E
Sbjct: 61 PTETRMGSGKGSPEYWVSVVKPGRILYEMGGVSEIVAREAISIAASKMPIRTQFLIAE 118
>emb|CAA31716.1| ribosomal protein L16 [Spinacia oleracea] gi|71248|pir||R5SP16
ribosomal protein L16 - spinach chloroplast
Length = 135
Score = 209 bits (533), Expect = 1e-53
Identities = 101/118 (85%), Positives = 110/118 (92%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKG +YRGN I FG+YALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVTV
Sbjct: 17 MKGISYRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNGRRGGKIWVRIFPDKPVTV 76
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
RP ETRMGSGKGSPEYWVAVVKPG+ILYE+ GV ENIAR+ ++IAASKMPIRTQFI+S
Sbjct: 77 RPAETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARRDVAIAASKMPIRTQFIIS 134
>dbj|BAD04080.1| ribosomal protein large subunit 16 [Cistanche deserticola]
gi|17129606|dbj|BAB72241.1| ribosomal protein large
subunit 16 [Cistanche salsa]
Length = 118
Score = 209 bits (533), Expect = 1e-53
Identities = 103/117 (88%), Positives = 108/117 (92%)
Query: 2 KGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTVR 61
KG +YRGN I FGKYALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVTVR
Sbjct: 1 KGISYRGNHICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVR 60
Query: 62 PTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
P ETRMGSGKG PEYWVAVVKP +ILYEMGGV ENIAR+AI IAASKMPIRTQFI+S
Sbjct: 61 PAETRMGSGKGVPEYWVAVVKPERILYEMGGVTENIARRAILIAASKMPIRTQFIIS 117
>dbj|BAC76869.1| ribosomal protein large subunit 16 [Papaver bracteatum]
Length = 118
Score = 209 bits (533), Expect = 1e-53
Identities = 101/118 (85%), Positives = 111/118 (93%)
Query: 2 KGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTVR 61
KG +YRGN ISFG+YALQALEPAWITSRQIEAGRRAM+R RRGGKIWVRIFPDKPVT+R
Sbjct: 1 KGISYRGNHISFGRYALQALEPAWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTLR 60
Query: 62 PTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILSE 119
PTETRMGSGKGSPEYWV+VVKPG+ILYEMGGV E +AR+AISIAASKMPIRTQF+ +E
Sbjct: 61 PTETRMGSGKGSPEYWVSVVKPGRILYEMGGVSEIVAREAISIAASKMPIRTQFLFAE 118
>dbj|BAD04082.1| ribosomal protein large subunit 16 [Cistanche sinensis]
gi|39573660|dbj|BAD04081.1| ribosomal protein large
subunit 16 [Cistanche sinensis]
Length = 118
Score = 209 bits (532), Expect = 1e-53
Identities = 102/117 (87%), Positives = 109/117 (92%)
Query: 2 KGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTVR 61
KG +YRGN I FGKYALQALEPAWITSRQIEAGRRAM+RN RRGGKIWVRIFPDKPVTVR
Sbjct: 1 KGISYRGNHICFGKYALQALEPAWITSRQIEAGRRAMTRNTRRGGKIWVRIFPDKPVTVR 60
Query: 62 PTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILS 118
P ETRMGSGKGSPEYWVAVVKP +ILYEMGGV +NIAR+AI IAASKMPI+TQFI+S
Sbjct: 61 PAETRMGSGKGSPEYWVAVVKPAQILYEMGGVSKNIARRAILIAASKMPIQTQFIIS 117
>gb|AAS46146.1| ribosomal protein L16; rpl16 [Oryza sativa (japonica
cultivar-group)] gi|42795644|gb|AAS46209.1| ribosomal
protein L16; grpl16 [Oryza sativa (japonica
cultivar-group)]
Length = 120
Score = 209 bits (532), Expect = 1e-53
Identities = 100/119 (84%), Positives = 109/119 (91%)
Query: 1 MKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIWVRIFPDKPVTV 60
MKGK+YRGN I FG+YALQALEP WIT+RQIEAGRRAM+R RRGGKIWVRIFPDKPVT+
Sbjct: 1 MKGKSYRGNCICFGRYALQALEPTWITARQIEAGRRAMTRYARRGGKIWVRIFPDKPVTI 60
Query: 61 RPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIRTQFILSE 119
RPTETRMGSGKGSPEYWVAVVKPG+ILYEMGGV E +AR AISIAASKMPIR+QF+ E
Sbjct: 61 RPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVSETVARAAISIAASKMPIRSQFLRLE 119
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,388,117
Number of Sequences: 2540612
Number of extensions: 8256948
Number of successful extensions: 16710
Number of sequences better than 10.0: 487
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 16171
Number of HSP's gapped (non-prelim): 487
length of query: 119
length of database: 863,360,394
effective HSP length: 95
effective length of query: 24
effective length of database: 622,002,254
effective search space: 14928054096
effective search space used: 14928054096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC142142.2