BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141436.3 + phase: 0 /pseudo
(223 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB51950.1| transposase related protein [Zea mays] 102 8e-21
gb|AAU44336.1| putative polyprotein [Oryza sativa (japonica cult... 99 7e-20
gb|AAP53670.1| putative transposable element [Oryza sativa (japo... 99 9e-20
ref|XP_474817.1| OSJNBa0014F04.28 [Oryza sativa (japonica cultiv... 99 9e-20
gb|AAV44119.1| putative polyprotein [Oryza sativa (japonica cult... 99 9e-20
gb|AAV44079.1| putative polyprotein [Oryza sativa (japonica cult... 99 9e-20
emb|CAE05572.2| OSJNBb0013O03.13 [Oryza sativa (japonica cultiva... 98 2e-19
emb|CAD41543.2| OSJNBb0091E11.13 [Oryza sativa (japonica cultiva... 98 2e-19
gb|AAP52233.1| putative retroelement [Oryza sativa (japonica cul... 97 3e-19
ref|NP_909710.1| putative mutator-like transposase [Oryza sativa... 96 6e-19
gb|AAF24584.1| F22C12.1 [Arabidopsis thaliana] 92 1e-17
ref|NP_918834.1| putative transposable element [Oryza sativa (ja... 91 3e-17
gb|AAP54539.1| putative Mu transposable element [Oryza sativa (j... 87 3e-16
gb|AAP53004.1| putative transposase related protein [Oryza sativ... 86 6e-16
gb|AAP51873.1| putative mutator-like transposase [Oryza sativa (... 86 6e-16
emb|CAE01942.2| OSJNBa0073L13.4 [Oryza sativa (japonica cultivar... 86 6e-16
gb|AAX92808.1| transposon protein, putative, mutator sub-class [... 86 6e-16
ref|XP_474655.1| OSJNBa0052P16.6 [Oryza sativa (japonica cultiva... 86 6e-16
ref|XP_463603.1| putative mutator-like transposase [Oryza sativa... 86 6e-16
ref|NP_915301.1| putative mutator-like transposase [Oryza sativa... 86 6e-16
>emb|CAB51950.1| transposase related protein [Zea mays]
Length = 863
Score = 102 bits (254), Expect = 8e-21
Identities = 64/208 (30%), Positives = 104/208 (49%), Gaps = 7/208 (3%)
Query: 20 MNIPTFEYYRSEI-DVADRKALAWVDNIPK--QKWNQSHDDGR-RWGHMTSNLVESQNNV 75
+ + FE E+ D + + W+ + + QKW ++D+G R+ TSN+ E N+V
Sbjct: 614 LEVSFFEDKLKELKDATNAEGKNWIAGLLREPQKWTSAYDEGGWRFEFQTSNMAELFNSV 673
Query: 76 YKGIRGLPITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHH 135
KGIRG+P+ AIV ++YRL A F R +A A G ++ +L N ++N H
Sbjct: 674 LKGIRGMPVNAIVTFTFYRLVAWFNDRHAQAKAMQTRGLRWAPKPTAHLNNAKERANRHE 733
Query: 136 VTQFDRDRYTFSVRE---TIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACS 192
V FD D + VR T E P + V L C CG+ R H PCSH +AA
Sbjct: 734 VQCFDEDLGKYEVRTMGGTTSDGEVRPSRTHVVLLDAFSCGCGKPRQYHFPCSHYVAAAR 793
Query: 193 SFSHDYKTFVDNKFTNECVYAVYNIHFD 220
+ +++ + ++F+ E + ++ F+
Sbjct: 794 HRNFAFESMIPSEFSVESLVRTWSPRFE 821
>gb|AAU44336.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1378
Score = 99.4 bits (246), Expect = 7e-20
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GRRWG+MT+N+ E N+V G+R L
Sbjct: 480 EALRQRIPEGPRK---WLEDELVDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKL 536
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P TAIV ++ + F R EA RV G+ +S ++ + K+N H FD+
Sbjct: 537 PATAIVSFTFMKCNDYFVNRHDEALKRVQLGQRWSTKVDSKMKVQKSKANKHTARCFDKQ 596
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ +G +KV+++ C C R H+PCSH+I
Sbjct: 597 KKTYEVTE----RGGVTRGGVRFGARAFKVEVEGNSCSCQRPLLYHMPCSHLI 645
>gb|AAP53670.1| putative transposable element [Oryza sativa (japonica
cultivar-group)] gi|37534162|ref|NP_921383.1| putative
transposable element [Oryza sativa (japonica
cultivar-group)] gi|21671916|gb|AAM74278.1| Putative
transposable element [Oryza sativa (japonica
cultivar-group)]
Length = 1592
Score = 99.0 bits (245), Expect = 9e-20
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GRRWG+MT+N+ E N+V G+R L
Sbjct: 670 EALRQRIPEGPRK---WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKL 726
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + F R EA RV G+ +S ++ + K+N H FD+
Sbjct: 727 PVTAIVSFTFMKCNDYFVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQ 786
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ +G +KV+ + C C R H+PCSH+I
Sbjct: 787 KKTYEVTE----RGGITRGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLI 835
>ref|XP_474817.1| OSJNBa0014F04.28 [Oryza sativa (japonica cultivar-group)]
gi|32488049|emb|CAE02862.1| OSJNBa0014F04.28 [Oryza
sativa (japonica cultivar-group)]
gi|38345180|emb|CAE03336.2| OSJNBb0005B05.3 [Oryza
sativa (japonica cultivar-group)]
Length = 1575
Score = 99.0 bits (245), Expect = 9e-20
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GRRWG+MT+N+ E N+V G+R L
Sbjct: 627 EALRQRIPEGPRK---WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKL 683
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + F R EA RV G+ +S ++ + K+N H FD+
Sbjct: 684 PVTAIVSFTFMKCNDYFVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQ 743
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ +G +KV+ + C C R H+PCSH+I
Sbjct: 744 KKTYEVTE----RGGITRGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLI 792
>gb|AAV44119.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 99.0 bits (245), Expect = 9e-20
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GRRWG+MT+N+ E N+V G+R L
Sbjct: 670 EALRQRIPEGPRK---WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKL 726
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + F R EA RV G+ +S ++ + K+N H FD+
Sbjct: 727 PVTAIVSFTFMKCNDYFVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQ 786
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ +G +KV+ + C C R H+PCSH+I
Sbjct: 787 KKTYEVTE----RGGITRGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLI 835
>gb|AAV44079.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1567
Score = 99.0 bits (245), Expect = 9e-20
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GRRWG+MT+N+ E N+V G+R L
Sbjct: 685 EALRQRIPEGPRK---WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKL 741
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + F R EA RV G+ +S ++ + K+N H FD+
Sbjct: 742 PVTAIVSFTFMKCNDYFVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQ 801
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ +G +KV+ + C C R H+PCSH+I
Sbjct: 802 KKTYEVTE----RGGITRGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLI 850
>emb|CAE05572.2| OSJNBb0013O03.13 [Oryza sativa (japonica cultivar-group)]
Length = 1611
Score = 98.2 bits (243), Expect = 2e-19
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GRRWG+MT+N+ E N+V G+R L
Sbjct: 637 EAVRQRIPEGPRK---WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKL 693
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + F R EA RV G+ +S ++ + K+N H FD+
Sbjct: 694 PVTAIVSFTFMKCNDYFVNRHDEALKRVQLGQRWSTKIDSKMKVQKNKANEHTARCFDQQ 753
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ +G +KV+ + C C R H+PCSH+I
Sbjct: 754 KKTYEVTE----RGGITRGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLI 802
>emb|CAD41543.2| OSJNBb0091E11.13 [Oryza sativa (japonica cultivar-group)]
gi|50925901|ref|XP_473014.1| OSJNBb0091E11.13 [Oryza
sativa (japonica cultivar-group)]
Length = 1107
Score = 98.2 bits (243), Expect = 2e-19
Identities = 58/173 (33%), Positives = 92/173 (52%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GRRWG+MT+N+ E N+V G+R L
Sbjct: 674 EALRQHIPEGSRK---WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKL 730
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + F R EA RV G+ +S ++ + K+N H FD+
Sbjct: 731 PVTAIVSFTFMKCNDYFVNRHDEALKRVQLGQRWSTKVDSKMKVQKSKANKHTARCFDKQ 790
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ G +KV+ + C C R H+PCSH+I
Sbjct: 791 KKTYEVTE----RGGITHGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLI 839
>gb|AAP52233.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37531288|ref|NP_919946.1| putative retroelement
[Oryza sativa (japonica cultivar-group)]
gi|22655792|gb|AAN04209.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 1460
Score = 97.1 bits (240), Expect = 3e-19
Identities = 57/173 (32%), Positives = 92/173 (52%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GRRWG+MT+N+ E N+V G+ L
Sbjct: 727 EALRQRIPEGPRK---WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVHKL 783
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + F R EA RV G+ +S ++ + K+N H FD+
Sbjct: 784 PVTAIVSFTFMKCNDYFVNRHDEALKRVQLGQRWSTKVDSKMKVQKSKANKHTARCFDKQ 843
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ +G +KV+ + C C R H+PCSH+I
Sbjct: 844 KKTYEVTE----RGGITRGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLI 892
>ref|NP_909710.1| putative mutator-like transposase [Oryza sativa (japonica
cultivar-group)] gi|28269461|gb|AAO38004.1| putative
mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 1360
Score = 96.3 bits (238), Expect = 6e-19
Identities = 57/173 (32%), Positives = 92/173 (52%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D + RWG+MT+N+ E N+V G+R L
Sbjct: 663 EALRQRIPEGPRK---WLEDELLDKDKWSRAYDRNSCRWGYMTTNMAEQFNSVLVGVRKL 719
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + F R +EA RV SGE +S ++ + K+N H FD+
Sbjct: 720 PVTAIVAFTFMKCNHYFVNRQNEAVKRVQSGERWSAKVASKMKVQKSKANKHTSRCFDKQ 779
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E K G+ + +KV+ + C C R H+PCSH++
Sbjct: 780 KKTYEVTE----KGGITRSGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLV 828
>gb|AAF24584.1| F22C12.1 [Arabidopsis thaliana]
Length = 3290
Score = 91.7 bits (226), Expect = 1e-17
Identities = 60/224 (26%), Positives = 104/224 (45%), Gaps = 17/224 (7%)
Query: 4 FKDGELKKKVEGMGYAMNIPTFEYYRSEIDVADRKALAWVDNIPKQKWNQSHDDGRRWGH 63
F+D LK V G F+ Y +EI+ + +A W+D P+ +W Q+HD GRR+
Sbjct: 1556 FQDDYLKNLVYEAGSTSEKEEFDSYMNEIEKKNSEARKWLDQFPQYQWAQAHDSGRRYRV 1615
Query: 64 MTSNLVESQN-----NVYKGIRGLPITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSE 118
MT ++++N ++ + GLP+TA + + F +++ RVN G+ +++
Sbjct: 1616 MT---IDAENLFAFCESFQSL-GLPVTATALLLFDEMRFFFYSGLCDSSGRVNRGDMYTK 1671
Query: 119 NSMKYLRNEVIKSNSHHVTQFDRDRYTFSVRETIEHKEGLPKGEYKVDLQNKWCDCGRFR 178
M L + S H V ++ + + E L + E+ V L C CG F+
Sbjct: 1672 PVMDQLEKLMTDSIPHVVMPLEKGLFQVT--------EPLQEDEWIVQLSEWSCTCGEFQ 1723
Query: 179 ALHLPCSHVIAACSSFSHDYKTFVDNKFTNECVYAVYNIHFDVV 222
PC HV+A C + +VD+ ++ + +Y Y F V
Sbjct: 1724 LKKFPCLHVLAVCEKLKINPLQYVDDCYSLDRLYKTYAATFSPV 1767
Score = 80.9 bits (198), Expect = 2e-14
Identities = 62/225 (27%), Positives = 99/225 (43%), Gaps = 19/225 (8%)
Query: 4 FKDGELKKKVEGMGYAMNIPTFEYYRSEIDVADRKALAWVDNIPKQKWNQSHDDGRRWGH 63
F+D L+ VE G F+ Y ++I + +A W+D IP+ KW +HD G R+G
Sbjct: 3053 FRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHKWALAHDSGLRYG- 3111
Query: 64 MTSNLVE-SQNNVYKGIRGLP-----ITAIVKASYYRLAALFAKRGHEAAARVNSGEPFS 117
++E + ++ RG P +T V + L + F K + +N G ++
Sbjct: 3112 ----IIEIDREALFAVCRGFPYCTVAMTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVYT 3167
Query: 118 ENSMKYLRNEVIKSNSHHVTQFDRDRYTFSVRETIEHKEGLPKGEYKVDLQNKWCDCGRF 177
E M L + S + +TQ +RD +F V E+ E K E+ V L C C +F
Sbjct: 3168 EPFMDKLEEFMTDSIPYVITQLERD--SFKVSESSE------KEEWIVQLNVSTCTCRKF 3219
Query: 178 RALHLPCSHVIAACSSFSHDYKTFVDNKFTNECVYAVYNIHFDVV 222
++ PC H +A + +VD +T E Y F V
Sbjct: 3220 QSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPV 3264
Score = 73.9 bits (180), Expect = 3e-12
Identities = 58/225 (25%), Positives = 96/225 (41%), Gaps = 13/225 (5%)
Query: 2 RSFKDGELKKKVEGMGYAMNIPTFEYYRSEIDVADRKALAWVDNIPKQKWNQSHDDGRRW 61
R F L ++ G F Y ++I + +A W+D P+ +W +HD+GRR+
Sbjct: 2328 RVFPSFCLGARIRRAGSTSQKDEFVSYMNDIKEKNPEARKWLDQFPQNRWALAHDNGRRY 2387
Query: 62 GHMTSNL--VESQNNVYKGIRGLPITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSEN 119
G M N + + N ++ G +T V + L + F K + + +N G+ ++E
Sbjct: 2388 GIMEINTKALFAVCNAFEQA-GHVVTGSVLLLFDELRSKFDKSFSCSRSSLNCGDVYTEP 2446
Query: 120 SMKYLRN--EVIKSNSHHVTQFDRDRYTFSVRETIEHKEGLPKGEYKVDLQNKWCDCGRF 177
M L + S+ VT D + + + L KGE V L + C CG F
Sbjct: 2447 VMDKLEEFRTTFVTYSYIVTPLDNNAFQVAT--------ALDKGECIVQLSDCSCTCGDF 2498
Query: 178 RALHLPCSHVIAACSSFSHDYKTFVDNKFTNECVYAVYNIHFDVV 222
+ PC H +A C + +VD+ +T E + Y F V
Sbjct: 2499 QRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYATIFSHV 2543
Score = 72.8 bits (177), Expect = 7e-12
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 13/222 (5%)
Query: 4 FKDGELKKKVEGMGYAMNIPTFEYYRSEIDVADRKALAWVDNIPKQKWNQSHDDGRRWGH 63
F+D L+ V+ G F+ Y +I+ + +A W+D P+ +W +HD+GRR+G
Sbjct: 728 FRDYYLEDLVKRAGSTSQKEEFDSYMKDIEKKNSEARKWLDQFPQNQWALAHDNGRRYGI 787
Query: 64 M---TSNLVESQNNVYKGIRGLPITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENS 120
M T+ L E N + +T V + L F + + G ++E
Sbjct: 788 MEIETTTLFEDFN--VSHLDNHVLTGYVLRLFDELRHSFDEFFCFSRGSRKCGNVYTEPV 845
Query: 121 MKYLRNEVIKSNSHHVTQFDRDRYTFSVRETIEHKEGLPKGEYKVDLQNKWCDCGRFRAL 180
+ L S ++ V D + + + + E+ V L + C CG F++
Sbjct: 846 TEKLAESRKDSVTYDVMPLDNNAFQVTAPQ--------ENDEWTVQLSDCSCTCGEFQSC 897
Query: 181 HLPCSHVIAACSSFSHDYKTFVDNKFTNECVYAVYNIHFDVV 222
PC H +A C + +VD+ +T E +Y Y F V
Sbjct: 898 KFPCLHALAVCKLLKINPLEYVDDCYTLERLYKTYTATFSPV 939
>ref|NP_918834.1| putative transposable element [Oryza sativa (japonica
cultivar-group)]
Length = 1250
Score = 90.5 bits (223), Expect = 3e-17
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 26 EYYRSEIDVADRKALAWVDN--IPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGL 82
E R I RK W+++ + K KW++++D +GR WG+MT+N+ E N+V G+R L
Sbjct: 638 EALRQRIPEGPRK---WLEDELLDKDKWSRAYDRNGRWWGYMTTNMAEQFNSVLVGVRKL 694
Query: 83 PITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRD 142
P+TAIV ++ + R EA RV G+ +S ++ + K+N H FD+
Sbjct: 695 PVTAIVSFTFMKCNDYIVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQ 754
Query: 143 RYTFSVRETIEHKEGLPKG-------EYKVDLQNKWCDCGRFRALHLPCSHVI 188
+ T+ V E + G+ G +KV + C C R H+PCSH+I
Sbjct: 755 KKTYEVTE----RGGITCGGVRFGARAFKVKGEGNSCSCQRPLLYHMPCSHLI 803
>gb|AAP54539.1| putative Mu transposable element [Oryza sativa (japonica
cultivar-group)] gi|37535900|ref|NP_922252.1| putative
Mu transposable element [Oryza sativa (japonica
cultivar-group)] gi|22324952|gb|AAM95679.1| putative Mu
transposable element [Oryza sativa (japonica
cultivar-group)]
Length = 1536
Score = 87.0 bits (214), Expect = 3e-16
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 37 RKALAWVDNIPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRL 95
R W++N PK+KW+ D DG R+G MT+NL E N V +G+R LP+ AIV+ +
Sbjct: 601 RNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGT 660
Query: 96 AALFAKRGHE-AAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSV------ 148
A F R + + ++ F KY+ +++ K+ H V + + +
Sbjct: 661 QAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRS 720
Query: 149 RETIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTN 208
R I K+ + + K D C C + + HLPCSHV+AA +V N F
Sbjct: 721 RRVIYRKQAVQECVLKAD-GGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRK 779
Query: 209 ECVYAVYN 216
E ++ ++
Sbjct: 780 EAIFHTWS 787
>gb|AAP53004.1| putative transposase related protein [Oryza sativa (japonica
cultivar-group)] gi|37532830|ref|NP_920717.1| putative
transposase related protein [Oryza sativa (japonica
cultivar-group)] gi|20303617|gb|AAM19044.1| putative
transposase related protein [Oryza sativa (japonica
cultivar-group)]
Length = 1557
Score = 86.3 bits (212), Expect = 6e-16
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 37 RKALAWVDNIPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRL 95
R W++N PK+KW+ D DG R+G MT+NL E N V +G+R LP+ AIV+ +
Sbjct: 574 RNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGT 633
Query: 96 AALFAKRGHE-AAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSV------ 148
A F R + + ++ F KY+ +++ K+ H V + + +
Sbjct: 634 QAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRS 693
Query: 149 RETIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTN 208
R I K+ + + K D C C + + HLPCSHV+ A S +V N F
Sbjct: 694 RRGIYRKQAVQECVLKAD-GGCTCSCMKPKLHHLPCSHVLTAASDCGISPNVYVSNYFRK 752
Query: 209 ECVYAVYN 216
E ++ ++
Sbjct: 753 EAIFHTWS 760
>gb|AAP51873.1| putative mutator-like transposase [Oryza sativa (japonica
cultivar-group)] gi|37530568|ref|NP_919586.1| putative
mutator-like transposase [Oryza sativa (japonica
cultivar-group)] gi|17047024|gb|AAL34929.1| Putative
mutator-like transposase [Oryza sativa]
Length = 1597
Score = 86.3 bits (212), Expect = 6e-16
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 37 RKALAWVDNIPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRL 95
R W++N PK+KW+ D DG R+G MT+NL E N V +G+R LP+ AIV+ +
Sbjct: 601 RNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGT 660
Query: 96 AALFAKRGHE-AAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSV------ 148
A F R + + ++ F KY+ +++ K+ H V + + +
Sbjct: 661 QAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRS 720
Query: 149 RETIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTN 208
R I K+ + + K D C C + + HLPCSHV+AA +V N F
Sbjct: 721 RRGIYRKQAVQECVLKAD-GGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRK 779
Query: 209 ECVYAVYN 216
E ++ ++
Sbjct: 780 EAIFHTWS 787
>emb|CAE01942.2| OSJNBa0073L13.4 [Oryza sativa (japonica cultivar-group)]
gi|50921337|ref|XP_471029.1| OSJNBa0073L13.4 [Oryza
sativa (japonica cultivar-group)]
Length = 1342
Score = 86.3 bits (212), Expect = 6e-16
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 37 RKALAWVDNIPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRL 95
R W++N PK+KW+ D DG R+G MT+NL E N V +G+R LP+ AIV+ +
Sbjct: 472 RNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGT 531
Query: 96 AALFAKRGHE-AAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSV------ 148
A F R + + ++ F KY+ +++ K+ H V + + +
Sbjct: 532 QAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKAQRHRVVAQGTQVHRYEIMCVDRS 591
Query: 149 RETIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTN 208
R I K+ + + K D C C + + HLPCSHV+AA +V N F
Sbjct: 592 RRGIYRKQAVQECVLKAD-GGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRK 650
Query: 209 ECVYAVYN 216
E ++ ++
Sbjct: 651 EAIFHTWS 658
>gb|AAX92808.1| transposon protein, putative, mutator sub-class [Oryza sativa
(japonica cultivar-group)]
Length = 1597
Score = 86.3 bits (212), Expect = 6e-16
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 37 RKALAWVDNIPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRL 95
R W++N PK+KW+ D DG R+G MT+NL E N V +G+R LP+ AIV+ +
Sbjct: 601 RNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGT 660
Query: 96 AALFAKRGHE-AAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSV------ 148
A F R + + ++ F KY+ +++ K+ H V + + +
Sbjct: 661 QAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRS 720
Query: 149 RETIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTN 208
R I K+ + + K D C C + + HLPCSHV+AA +V N F
Sbjct: 721 RRGIYRKQAVQECVLKAD-GGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRK 779
Query: 209 ECVYAVYN 216
E ++ ++
Sbjct: 780 EAIFHTWS 787
>ref|XP_474655.1| OSJNBa0052P16.6 [Oryza sativa (japonica cultivar-group)]
gi|38569201|emb|CAE04557.3| OSJNBa0052P16.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1489
Score = 86.3 bits (212), Expect = 6e-16
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 37 RKALAWVDNIPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRL 95
R W++N PK+KW+ D DG R+G MT+NL E N V +G+R LP+ AIV+ +
Sbjct: 450 RNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGT 509
Query: 96 AALFAKRGHE-AAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSV------ 148
A F R + + ++ F KY+ +++ K+ H V + + +
Sbjct: 510 QAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHQYEIMCVDRS 569
Query: 149 RETIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTN 208
R I K+ + + K D C C + + HLPCSHV+AA +V N F
Sbjct: 570 RRGIYRKQAVQECVLKAD-GGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRK 628
Query: 209 ECVYAVYN 216
E ++ ++
Sbjct: 629 EAIFHTWS 636
>ref|XP_463603.1| putative mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 1592
Score = 86.3 bits (212), Expect = 6e-16
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 37 RKALAWVDNIPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRL 95
R W++N PK+KW+ D DG R+G MT+NL E N V +G+R LP+ AIV+ +
Sbjct: 601 RNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGT 660
Query: 96 AALFAKRGHE-AAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSV------ 148
A F R + + ++ F KY+ +++ K+ H V + + +
Sbjct: 661 QAYFRDRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRS 720
Query: 149 RETIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTN 208
R I K+ + + K D C C + + HLPCSHV+AA +V N F
Sbjct: 721 RRGIYRKQAVQECVLKAD-GGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRK 779
Query: 209 ECVYAVYN 216
E ++ ++
Sbjct: 780 EAIFHTWS 787
>ref|NP_915301.1| putative mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 1626
Score = 86.3 bits (212), Expect = 6e-16
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 37 RKALAWVDNIPKQKWNQSHD-DGRRWGHMTSNLVESQNNVYKGIRGLPITAIVKASYYRL 95
R W++N PK+KW+ D DG R+G MT+NL E N V +G+R LP+ AIV+ +
Sbjct: 601 RNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRILPLVAIVEFILHGT 660
Query: 96 AALFAKRGHE-AAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSV------ 148
A F R + + ++ F KY+ +++ K+ H V + + +
Sbjct: 661 QAYFRDRYQKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRS 720
Query: 149 RETIEHKEGLPKGEYKVDLQNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTN 208
R I K+ + + K D C C + + HLPCSHV+AA +V N F
Sbjct: 721 RRGIYRKQAVQECVLKAD-GGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRK 779
Query: 209 ECVYAVYN 216
E ++ ++
Sbjct: 780 EAIFHTWS 787
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.135 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 390,107,403
Number of Sequences: 2540612
Number of extensions: 15821844
Number of successful extensions: 32557
Number of sequences better than 10.0: 265
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 32037
Number of HSP's gapped (non-prelim): 284
length of query: 223
length of database: 863,360,394
effective HSP length: 123
effective length of query: 100
effective length of database: 550,865,118
effective search space: 55086511800
effective search space used: 55086511800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)
Medicago: description of AC141436.3