Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141414.1 - phase: 0 
         (104 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_974615.1| Expressed protein [Arabidopsis thaliana]              76  2e-13
dbj|BAD33827.1| hypothetical protein [Oryza sativa (japonica cul...    73  1e-12
emb|CAD70286.1| conserved hypothetical protein [Neurospora crass...    42  0.004
emb|CAB61466.1| SPAC227.17c [Schizosaccharomyces pombe] gi|19113...    41  0.008
gb|AAB64954.1| Ydr512cp; CAI: 0.08 [Saccharomyces cerevisiae] gi...    39  0.031
emb|CAG83250.1| unnamed protein product [Yarrowia lipolytica CLI...    39  0.031
gb|EAL20050.1| hypothetical protein CNBF3760 [Cryptococcus neofo...    37  0.12
gb|AAW43945.1| hypothetical protein CNF00930 [Cryptococcus neofo...    37  0.12
emb|CAH01107.1| unnamed protein product [Kluyveromyces lactis NR...    37  0.15
gb|EAK84398.1| hypothetical protein UM03168.1 [Ustilago maydis 5...    35  0.34
gb|AAS54079.1| AFR707Cp [Ashbya gossypii ATCC 10895] gi|45199226...    35  0.45
gb|EAA62317.1| hypothetical protein AN5136.2 [Aspergillus nidula...    35  0.59
emb|CAG61439.1| unnamed protein product [Candida glabrata CBS138...    33  1.7
gb|EAA70430.1| hypothetical protein FG00837.1 [Gibberella zeae P...    32  2.9
gb|EAA55307.1| hypothetical protein MG06964.4 [Magnaporthe grise...    32  2.9
gb|EAK95916.1| hypothetical protein CaO19.11017 [Candida albican...    32  3.8
gb|EAL88445.1| conserved hypothetical protein [Aspergillus fumig...    31  8.5

>ref|NP_974615.1| Expressed protein [Arabidopsis thaliana]
          Length = 127

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 41/88 (46%), Positives = 53/88 (59%), Gaps = 20/88 (22%)

Query: 26 MSSEKEELSSTVKRKLSCFEHFDALWFCY-------------------SPVYQMKQYYRL 66
          MSSE E+ SS+V+R++SC + FDALWFCY                   +P YQM+QYYR+
Sbjct: 1  MSSENED-SSSVRRRVSCTKCFDALWFCYWMSRWSNITSNGDDTGNDLAPFYQMQQYYRV 59

Query: 67 GTLDNCRGKWKAWTDCLMLKTKPKSQVE 94
          G LD+C  K+    DCL LKTK  S+ E
Sbjct: 60 GKLDDCTKKFSDLFDCLSLKTKRASEAE 87


>dbj|BAD33827.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 169

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 30/52 (57%), Positives = 36/52 (68%)

Query: 43 CFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKTKPKSQVE 94
          C + FDALWFCYSP YQ++ YYR G  DNC GKW    DCL LKT+  ++ E
Sbjct: 23 CVKCFDALWFCYSPYYQLQNYYRHGEFDNCFGKWGDLVDCLWLKTRRAAEAE 74


>emb|CAD70286.1| conserved hypothetical protein [Neurospora crassa]
           gi|32419611|ref|XP_330249.1| predicted protein
           [Neurospora crassa] gi|28924843|gb|EAA33941.1| predicted
           protein [Neurospora crassa]
          Length = 282

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 17/47 (36%), Positives = 24/47 (50%)

Query: 41  LSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKT 87
           +SC + FD  W C +P  Q    YR GT+ NC   W  +  C+  K+
Sbjct: 155 MSCRDAFDYAWHCQTPGAQFNAVYRYGTMKNCSELWDDFWFCMRTKS 201


>emb|CAB61466.1| SPAC227.17c [Schizosaccharomyces pombe]
          gi|19113883|ref|NP_592971.1| hypothetical protein
          SPAC227.17c [Schizosaccharomyces pombe 972h-]
          gi|11289169|pir||T50173 hypothetical protein
          SPAC227.17c [imported] - fission yeast
          (Schizosaccharomyces pombe)
          gi|50401807|sp|Q9UTC2|YIDH_SCHPO Hypothetical protein
          C227.17c in chromosome I
          Length = 121

 Score = 40.8 bits (94), Expect = 0.008
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 46 HFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKTKPKSQVEVG 96
          +FD +  C +   QM  YYR G  + C+G +K +  CL  K+K   + + G
Sbjct: 39 YFDQMAMCLTVFSQMNHYYRYGEYNRCKGNFKDFKWCLSTKSKAHEEAQEG 89


>gb|AAB64954.1| Ydr512cp; CAI: 0.08 [Saccharomyces cerevisiae]
           gi|6320721|ref|NP_010800.1| Non-essential protein of
           unknown function required for transcriptional induction
           of the early meiotic-specific transcription factor IME1,
           also required for sporulation; Emi1p [Saccharomyces
           cerevisiae] gi|2131539|pir||S69569 hypothetical protein
           YDR512c - yeast (Saccharomyces cerevisiae)
          Length = 187

 Score = 38.9 bits (89), Expect = 0.031
 Identities = 19/64 (29%), Positives = 31/64 (47%)

Query: 26  MSSEKEELSSTVKRKLSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLML 85
           +  ++E +S+     +SC E FD L  CYS   Q + YYR G   +C  +   +  C++ 
Sbjct: 90  LRKKQERMSTKYPTTMSCREAFDQLTSCYSIGGQFRSYYRYGDFTSCDKQVSKFKFCIIH 149

Query: 86  KTKP 89
              P
Sbjct: 150 GNDP 153


>emb|CAG83250.1| unnamed protein product [Yarrowia lipolytica CLIB99]
           gi|50547055|ref|XP_500997.1| hypothetical protein
           [Yarrowia lipolytica]
          Length = 181

 Score = 38.9 bits (89), Expect = 0.031
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 40  KLSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKTKPK 90
           ++SC+E F+ +  CYS   Q++  YR G+L+ C      W  C+ +K  P+
Sbjct: 100 EMSCWEAFNEVVACYSVGGQVRNLYRFGSLNYCDKPKDKWKFCMGVKLDPE 150


>gb|EAL20050.1| hypothetical protein CNBF3760 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 163

 Score = 37.0 bits (84), Expect = 0.12
 Identities = 16/46 (34%), Positives = 25/46 (53%)

Query: 43  CFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKTK 88
           C    D    CY+ V Q++  YR G L NC  K++ +  C+ LK++
Sbjct: 64  CMRLLDEFLMCYALVPQLRNIYRHGELHNCSWKFQDFKYCMSLKSE 109


>gb|AAW43945.1| hypothetical protein CNF00930 [Cryptococcus neoformans var.
           neoformans JEC21] gi|58268192|ref|XP_571252.1|
           hypothetical protein CNF00930 [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 163

 Score = 37.0 bits (84), Expect = 0.12
 Identities = 16/46 (34%), Positives = 25/46 (53%)

Query: 43  CFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKTK 88
           C    D    CY+ V Q++  YR G L NC  K++ +  C+ LK++
Sbjct: 64  CMRLLDEFLMCYALVPQLRNIYRHGELHNCSWKFQDFKYCMSLKSE 109


>emb|CAH01107.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
          gi|50304601|ref|XP_452256.1| unnamed protein product
          [Kluyveromyces lactis]
          Length = 86

 Score = 36.6 bits (83), Expect = 0.15
 Identities = 17/57 (29%), Positives = 30/57 (51%)

Query: 33 LSSTVKRKLSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKTKP 89
          +SS     +SC + FD L  C+S   Q + YYR G ++ C  +++ +  C++    P
Sbjct: 1  MSSNYPTTMSCTDAFDQLTGCFSLGGQFRNYYRHGHMNECLKEFEKFKFCVIHSKDP 57


>gb|EAK84398.1| hypothetical protein UM03168.1 [Ustilago maydis 521]
          gi|49073076|ref|XP_400783.1| hypothetical protein
          UM03168.1 [Ustilago maydis 521]
          Length = 160

 Score = 35.4 bits (80), Expect = 0.34
 Identities = 18/53 (33%), Positives = 26/53 (48%)

Query: 34 SSTVKRKLSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLK 86
          S+ V    SC   FD    C++   Q+K  YR G L +C+ K   +  CL +K
Sbjct: 28 STPVSEMPSCTNMFDKWAACFALGPQLKAVYRYGGLQDCKAKLDDFKHCLTMK 80


>gb|AAS54079.1| AFR707Cp [Ashbya gossypii ATCC 10895]
          gi|45199226|ref|NP_986255.1| AFR707Cp [Eremothecium
          gossypii]
          Length = 97

 Score = 35.0 bits (79), Expect = 0.45
 Identities = 17/61 (27%), Positives = 31/61 (49%)

Query: 29 EKEELSSTVKRKLSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKTK 88
          E ++ +     ++SC E FD L  CYS    ++ YYR G  + C  + + +  C++  + 
Sbjct: 8  EPQQPAEQYPSQISCTEAFDRLTDCYSIGGLVRHYYRHGEFNGCSKEIERFKFCILHGSD 67

Query: 89 P 89
          P
Sbjct: 68 P 68


>gb|EAA62317.1| hypothetical protein AN5136.2 [Aspergillus nidulans FGSC A4]
           gi|67537932|ref|XP_662740.1| hypothetical protein
           AN5136_2 [Aspergillus nidulans FGSC A4]
           gi|49095624|ref|XP_409273.1| hypothetical protein
           AN5136.2 [Aspergillus nidulans FGSC A4]
          Length = 221

 Score = 34.7 bits (78), Expect = 0.59
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 41  LSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLKT 87
           +SC + FD  +FC S   Q    YR G L +C   W+ +  C+  +T
Sbjct: 105 MSCRDAFDYAFFCQSLGGQFVNVYRYGELRSCSEHWENFWLCMKTRT 151


>emb|CAG61439.1| unnamed protein product [Candida glabrata CBS138]
          gi|50292091|ref|XP_448478.1| unnamed protein product
          [Candida glabrata]
          Length = 88

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 26 MSSEKEELSSTVKRKLSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLML 85
          MS E  +  +T    +SC E FD L  C S   Q + YYR G    C  +   +  C++ 
Sbjct: 1  MSQENVKYPTT----MSCREAFDQLTTCLSIGGQFRNYYRYGEFSACEKQVNKFKFCILN 56

Query: 86 KTKP 89
             P
Sbjct: 57 AKDP 60


>gb|EAA70430.1| hypothetical protein FG00837.1 [Gibberella zeae PH-1]
           gi|46107908|ref|XP_381013.1| hypothetical protein
           FG00837.1 [Gibberella zeae PH-1]
          Length = 210

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 14/46 (30%), Positives = 21/46 (45%)

Query: 41  LSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLK 86
           +SC + FD  W C     Q    YR G + +C   W  +  C+ +K
Sbjct: 112 MSCRQAFDQAWSCNGMGGQFIAVYRYGEMRSCSEHWDDFWFCMRVK 157


>gb|EAA55307.1| hypothetical protein MG06964.4 [Magnaporthe grisea 70-15]
           gi|39978159|ref|XP_370467.1| hypothetical protein
           MG06964.4 [Magnaporthe grisea 70-15]
          Length = 274

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 16/59 (27%), Positives = 29/59 (49%)

Query: 28  SEKEELSSTVKRKLSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCLMLK 86
           +++E + S +   +SC + FD  + C S   Q    YR G + +C   W  +  C+ +K
Sbjct: 127 AKEEIVQSLMPTDMSCRDAFDYAYGCNSIRGQFNAVYRYGEVRSCSELWDNFWFCMRVK 185


>gb|EAK95916.1| hypothetical protein CaO19.11017 [Candida albicans SC5314]
          gi|46436491|gb|EAK95852.1| hypothetical protein
          CaO19.3533 [Candida albicans SC5314]
          Length = 149

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 10/64 (15%)

Query: 26 MSSEKEELSSTVKRKLSCFEH---------FDALWFCYSPVYQMKQYYRLGTLDNC-RGK 75
          +   ++E++ ++++  S  E+          D L  C++   Q+K YYR GT D+C R +
Sbjct: 22 VQKRRKEITKSIQKDTSLNEYPGSVSMMTALDELIACFALGGQVKNYYRYGTYDSCTRQR 81

Query: 76 WKAW 79
           K W
Sbjct: 82 EKFW 85


>gb|EAL88445.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
          Length = 227

 Score = 30.8 bits (68), Expect = 8.5
 Identities = 15/43 (34%), Positives = 20/43 (45%)

Query: 41  LSCFEHFDALWFCYSPVYQMKQYYRLGTLDNCRGKWKAWTDCL 83
           +SC   FD  +FC S   Q    YR G L +C   W  +  C+
Sbjct: 115 MSCRSAFDYAFFCQSFGGQFVNVYRYGELRSCSEHWDNFWLCM 157


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.326    0.137    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,996,350
Number of Sequences: 2540612
Number of extensions: 5627075
Number of successful extensions: 12398
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12376
Number of HSP's gapped (non-prelim): 17
length of query: 104
length of database: 863,360,394
effective HSP length: 80
effective length of query: 24
effective length of database: 660,111,434
effective search space: 15842674416
effective search space used: 15842674416
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 68 (30.8 bits)


Medicago: description of AC141414.1