BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140913.5 + phase: 0 /pseudo
(584 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU44336.1| putative polyprotein [Oryza sativa (japonica cult... 125 4e-27
emb|CAE05572.2| OSJNBb0013O03.13 [Oryza sativa (japonica cultiva... 122 2e-26
ref|XP_474817.1| OSJNBa0014F04.28 [Oryza sativa (japonica cultiv... 121 7e-26
gb|AAP52233.1| putative retroelement [Oryza sativa (japonica cul... 120 2e-25
gb|AAV44119.1| putative polyprotein [Oryza sativa (japonica cult... 119 3e-25
gb|AAV44079.1| putative polyprotein [Oryza sativa (japonica cult... 119 3e-25
gb|AAP53670.1| putative transposable element [Oryza sativa (japo... 118 6e-25
emb|CAD41543.2| OSJNBb0091E11.13 [Oryza sativa (japonica cultiva... 117 8e-25
emb|CAB51950.1| transposase related protein [Zea mays] 114 7e-24
ref|NP_909710.1| putative mutator-like transposase [Oryza sativa... 107 1e-21
gb|AAX95472.1| SWIM zinc finger, putative [Oryza sativa (japonic... 102 3e-20
ref|NP_915301.1| putative mutator-like transposase [Oryza sativa... 101 6e-20
gb|AAP51873.1| putative mutator-like transposase [Oryza sativa (... 100 1e-19
gb|AAX92808.1| transposon protein, putative, mutator sub-class [... 100 1e-19
gb|AAP53004.1| putative transposase related protein [Oryza sativ... 100 1e-19
gb|AAP53990.1| putative mutator protein [Oryza sativa (japonica ... 100 2e-19
emb|CAE01942.2| OSJNBa0073L13.4 [Oryza sativa (japonica cultivar... 100 2e-19
ref|XP_474655.1| OSJNBa0052P16.6 [Oryza sativa (japonica cultiva... 100 2e-19
emb|CAI44652.1| OSJNBa0096F01.20 [Oryza sativa (japonica cultiva... 100 2e-19
gb|AAP54160.1| putative transposase [Oryza sativa (japonica cult... 100 2e-19
>gb|AAU44336.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1378
Score = 125 bits (314), Expect = 4e-27
Identities = 69/227 (30%), Positives = 116/227 (50%), Gaps = 8/227 (3%)
Query: 339 WVDN--IPKENWTQAYDE-GRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD GRRWG+MT+N+ E +N V G R LP T IV T+ + +
Sbjct: 493 WLEDELVDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKLPATAIVSFTFMKCNDY 552
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREGR 455
F +R + RV G ++ + +K K+N H F++++ T+ V E G
Sbjct: 553 FVNRHDEALKRVQLGQRWSTKVDSKMKVQKSKANKHTARCFDKQKKTYEVTERGGVTRGG 612
Query: 456 ---PMRTFKVDLRAGWCDCGKFQALHLPCSHVIAA--CSSFRHDYTTLIPGVLKNESVYS 510
R FKV++ C C + H+PCSH+I + + +P + +V +
Sbjct: 613 VRFGARAFKVEVEGNSCSCQRPLLYHMPCSHLIHVYLIHAIDEESPNRMPYQFSSRAVVN 672
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMD 557
+ + F+ D + WLPYDG +PN++ +G+ S R + EMD
Sbjct: 673 TWASRFEPYLDPTQWLPYDGEEFVADPNLKIKTRGKRRSKRFKNEMD 719
>emb|CAE05572.2| OSJNBb0013O03.13 [Oryza sativa (japonica cultivar-group)]
Length = 1611
Score = 122 bits (307), Expect = 2e-26
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 20/255 (7%)
Query: 339 WVDN--IPKENWTQAYDE-GRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD GRRWG+MT+N+ E +N V G R LPVT IV T+ + +
Sbjct: 650 WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKLPVTAIVSFTFMKCNDY 709
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREGR 455
F +R + RV G ++ + +K K+N H F++++ T+ V E G
Sbjct: 710 FVNRHDEALKRVQLGQRWSTKIDSKMKVQKNKANEHTARCFDQQKKTYEVTERGGITRGG 769
Query: 456 ---PMRTFKVDLRAGWCDCGKFQALHLPCSHVIAACSSFRHDYTT--LIPGVLKNESVYS 510
R FKV+ C C + H+PCSH+I + D + +P + +V +
Sbjct: 770 VRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYLIYAIDEESPNRMPYQFSSRAVVN 829
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDEEV---------- 560
+ + F+ D + W PYDG +PN++ +G+ S R + EMD +
Sbjct: 830 TWASRFEPYLDPTQWPPYDGEEFVADPNLKIKTRGKRRSKRFKNEMDSGLGGSGRKPPSC 889
Query: 561 --VERTPIPRQCWLC 573
+ P+ +C LC
Sbjct: 890 VQLYAAPVQNRCSLC 904
>ref|XP_474817.1| OSJNBa0014F04.28 [Oryza sativa (japonica cultivar-group)]
gi|32488049|emb|CAE02862.1| OSJNBa0014F04.28 [Oryza
sativa (japonica cultivar-group)]
gi|38345180|emb|CAE03336.2| OSJNBb0005B05.3 [Oryza
sativa (japonica cultivar-group)]
Length = 1575
Score = 121 bits (303), Expect = 7e-26
Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 20/255 (7%)
Query: 339 WVDN--IPKENWTQAYDE-GRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD GRRWG+MT+N+ E +N V G R LPVT IV T+ + +
Sbjct: 640 WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKLPVTAIVSFTFMKCNDY 699
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREGR 455
F +R + RV G ++ + +K K+N H F++++ T+ V E G
Sbjct: 700 FVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQKKTYEVTERGGITRGG 759
Query: 456 ---PMRTFKVDLRAGWCDCGKFQALHLPCSHVIAA--CSSFRHDYTTLIPGVLKNESVYS 510
R FKV+ C C + H+PCSH+I + + +P + +V +
Sbjct: 760 VRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYLIHAIDKESPNRMPYQFSSRAVVN 819
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDEEV---------- 560
+ + F+ D + W YDG +PN++ +G+ S R + EMD +
Sbjct: 820 TWASRFEPYLDPTQWPSYDGEEFVADPNLKIKTRGKRRSKRFKNEMDSGLGGSGRKPPSC 879
Query: 561 --VERTPIPRQCWLC 573
++ P+ +C LC
Sbjct: 880 VQLDAAPVQNRCSLC 894
>gb|AAP52233.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37531288|ref|NP_919946.1| putative retroelement
[Oryza sativa (japonica cultivar-group)]
gi|22655792|gb|AAN04209.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 1460
Score = 120 bits (300), Expect = 2e-25
Identities = 68/227 (29%), Positives = 114/227 (49%), Gaps = 8/227 (3%)
Query: 339 WVDN--IPKENWTQAYDE-GRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD GRRWG+MT+N+ E +N V G LPVT IV T+ + +
Sbjct: 740 WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVHKLPVTAIVSFTFMKCNDY 799
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREGR 455
F +R + RV G ++ + +K K+N H F++++ T+ V E G
Sbjct: 800 FVNRHDEALKRVQLGQRWSTKVDSKMKVQKSKANKHTARCFDKQKKTYEVTERGGITRGG 859
Query: 456 ---PMRTFKVDLRAGWCDCGKFQALHLPCSHVIAA--CSSFRHDYTTLIPGVLKNESVYS 510
R FKV+ C C + H+PCSH+I + + +P + +V +
Sbjct: 860 VRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYMIHAIDEESPNRMPYQFSSRAVVN 919
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMD 557
+ + F+ D + W PYDG +PN++ +G+ S R + EMD
Sbjct: 920 TWASRFEPYLDPTQWPPYDGEEFVADPNLKIKTRGKRRSKRFKNEMD 966
>gb|AAV44119.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 119 bits (298), Expect = 3e-25
Identities = 71/255 (27%), Positives = 123/255 (47%), Gaps = 20/255 (7%)
Query: 339 WVDN--IPKENWTQAYDE-GRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD GRRWG+MT+N+ E +N V G R LPVT IV T+ + +
Sbjct: 683 WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKLPVTAIVSFTFMKCNDY 742
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREGR 455
F +R + RV G ++ + +K K+N H F++++ T+ V E G
Sbjct: 743 FVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQKKTYEVTERGGITRGG 802
Query: 456 ---PMRTFKVDLRAGWCDCGKFQALHLPCSHVIAA--CSSFRHDYTTLIPGVLKNESVYS 510
R FKV+ C C + H+PCSH+I + + +P + +V +
Sbjct: 803 VRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYLIHAIDKESPNRMPYQFSSRAVVN 862
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDEEV---------- 560
+ + F+ D + W Y+G +PN++ +G+ S R + EMD +
Sbjct: 863 TWASRFEPYLDPTQWPSYNGEEFVADPNLKIKTRGKRRSKRFKNEMDSGLGGSGRKPPSC 922
Query: 561 --VERTPIPRQCWLC 573
++ P+ +C LC
Sbjct: 923 VQLDAAPVQNRCSLC 937
>gb|AAV44079.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1567
Score = 119 bits (298), Expect = 3e-25
Identities = 71/255 (27%), Positives = 123/255 (47%), Gaps = 20/255 (7%)
Query: 339 WVDN--IPKENWTQAYDE-GRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD GRRWG+MT+N+ E +N V G R LPVT IV T+ + +
Sbjct: 698 WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKLPVTAIVSFTFMKCNDY 757
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREGR 455
F +R + RV G ++ + +K K+N H F++++ T+ V E G
Sbjct: 758 FVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQKKTYEVTERGGITRGG 817
Query: 456 ---PMRTFKVDLRAGWCDCGKFQALHLPCSHVIAA--CSSFRHDYTTLIPGVLKNESVYS 510
R FKV+ C C + H+PCSH+I + + +P + +V +
Sbjct: 818 VRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYLIHAIDKESPNRMPYQFSSRAVVN 877
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDEEV---------- 560
+ + F+ D + W Y+G +PN++ +G+ S R + EMD +
Sbjct: 878 TWASRFEPYLDPTQWPSYNGEEFVADPNLKIKTRGKRRSKRFKNEMDSGLGGSGRKPPSC 937
Query: 561 --VERTPIPRQCWLC 573
++ P+ +C LC
Sbjct: 938 VQLDAAPVQNRCSLC 952
>gb|AAP53670.1| putative transposable element [Oryza sativa (japonica
cultivar-group)] gi|37534162|ref|NP_921383.1| putative
transposable element [Oryza sativa (japonica
cultivar-group)] gi|21671916|gb|AAM74278.1| Putative
transposable element [Oryza sativa (japonica
cultivar-group)]
Length = 1592
Score = 118 bits (295), Expect = 6e-25
Identities = 71/255 (27%), Positives = 123/255 (47%), Gaps = 20/255 (7%)
Query: 339 WVDN--IPKENWTQAYDE-GRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD GRRWG+MT+N+ E +N V G R LPVT IV T+ + +
Sbjct: 683 WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKLPVTAIVSFTFMKCNDY 742
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREGR 455
F +R + RV G ++ + +K K+N H F++++ T+ V E G
Sbjct: 743 FVNRHDEALKRVQLGQRWSTKVDSKMKVQESKANKHTARCFDKQKKTYEVTERGGITRGG 802
Query: 456 ---PMRTFKVDLRAGWCDCGKFQALHLPCSHVIAACSSFRHDYTTL--IPGVLKNESVYS 510
R FKV+ C C + H+PCSH+I D +L +P + ++ +
Sbjct: 803 VRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYLIHAIDKESLNRMPYQFSSRAIVN 862
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDEEV---------- 560
+ + F+ D + W Y+G +PN++ +G+ R + EMD +
Sbjct: 863 TWASRFEPYLDPTQWPSYNGEEFVADPNLKIKTRGKRRLKRFKNEMDSGLGGSGRKPPSC 922
Query: 561 --VERTPIPRQCWLC 573
++ P+ +C LC
Sbjct: 923 VQLDAAPVQNRCSLC 937
>emb|CAD41543.2| OSJNBb0091E11.13 [Oryza sativa (japonica cultivar-group)]
gi|50925901|ref|XP_473014.1| OSJNBb0091E11.13 [Oryza
sativa (japonica cultivar-group)]
Length = 1107
Score = 117 bits (294), Expect = 8e-25
Identities = 67/234 (28%), Positives = 118/234 (49%), Gaps = 8/234 (3%)
Query: 339 WVDN--IPKENWTQAYDE-GRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD GRRWG+MT+N+ E +N V G R LPVT IV T+ + +
Sbjct: 687 WLEDELLDKDKWSRAYDRNGRRWGYMTTNMAEQFNSVLVGVRKLPVTAIVSFTFMKCNDY 746
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREGR 455
F +R + RV G ++ + +K K+N H F++++ T+ V E G
Sbjct: 747 FVNRHDEALKRVQLGQRWSTKVDSKMKVQKSKANKHTARCFDKQKKTYEVTERGGITHGG 806
Query: 456 ---PMRTFKVDLRAGWCDCGKFQALHLPCSHVIAA--CSSFRHDYTTLIPGVLKNESVYS 510
R FKV+ C C + H+PCSH+I + + +P + +V +
Sbjct: 807 VRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYLIHAIDEESPNRMPYQFSSRAVVN 866
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDEEVVERT 564
+ + F+ D + W YDG +PN++ +G+ S R + E + ++++ T
Sbjct: 867 TWASRFEPYLDPTQWPSYDGEEFVADPNLKIKTRGKRRSKRFKNEEETQILKCT 920
>emb|CAB51950.1| transposase related protein [Zea mays]
Length = 863
Score = 114 bits (286), Expect = 7e-24
Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 312 QLIYALNVPLFDYYRGVIKKA-NQRALDWVDNIPKE--NWTQAYDEGR-RWGHMTSNIVE 367
++ L V F+ +K A N +W+ + +E WT AYDEG R+ TSN+ E
Sbjct: 609 EICQQLEVSFFEDKLKELKDATNAEGKNWIAGLLREPQKWTSAYDEGGWRFEFQTSNMAE 668
Query: 368 SWNFVFKGTRNLPVTPIVQSTYYRLACFFADRAQKGFVRVGSGDLFTEYCQNAIKDDIVK 427
+N V KG R +PV IV T+YRL +F DR + G + + + +
Sbjct: 669 LFNSVLKGIRGMPVNAIVTFTFYRLVAWFNDRHAQAKAMQTRGLRWAPKPTAHLNNAKER 728
Query: 428 SNTHHVEQFNRERYTFSVREI---VNYREGRPMRTFKVDLRAGWCDCGKFQALHLPCSHV 484
+N H V+ F+ + + VR + + E RP RT V L A C CGK + H PCSH
Sbjct: 729 ANRHEVQCFDEDLGKYEVRTMGGTTSDGEVRPSRTHVVLLDAFSCGCGKPRQYHFPCSHY 788
Query: 485 IAACSSFRHDYTTLIPGVLKNESVYSIYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKK 544
+AA + ++IP ES+ ++ F+ D+S W Y GP+ +P R K
Sbjct: 789 VAAARHRNFAFESMIPSEFSVESLVRTWSPRFEPFLDESQWPTYTGPIYIADPAHRWDKC 848
Query: 545 GRPNSTRIRTEM 556
G +R M
Sbjct: 849 GTRKRSRCNMVM 860
>ref|NP_909710.1| putative mutator-like transposase [Oryza sativa (japonica
cultivar-group)] gi|28269461|gb|AAO38004.1| putative
mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 1360
Score = 107 bits (267), Expect = 1e-21
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 339 WVDN--IPKENWTQAYDEGR-RWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACF 395
W+++ + K+ W++AYD RWG+MT+N+ E +N V G R LPVT IV T+ + +
Sbjct: 676 WLEDELLDKDKWSRAYDRNSCRWGYMTTNMAEQFNSVLVGVRKLPVTAIVAFTFMKCNHY 735
Query: 396 FADRAQKGFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVRE---IVNYR 452
F +R + RV SG+ ++ + +K K+N H F++++ T+ V E I
Sbjct: 736 FVNRQNEAVKRVQSGERWSAKVASKMKVQKSKANKHTSRCFDKQKKTYEVTEKGGITRSG 795
Query: 453 EGRPMRTFKVDLRAGWCDCGKFQALHLPCSHVIAA--CSSFRHDYTTLIPGVLKNESVYS 510
R FKV+ C C + H+PCSH++ + + I + +V +
Sbjct: 796 VRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLVHVYLIHAIDEESPNRISYQFSSRAVVN 855
Query: 511 IYNTTFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDEEVV 561
+ + F+ D + W PYDG +P+++ +G+ R + E +V
Sbjct: 856 TWASRFEPYLDPTQWPPYDGEEFVADPDLKIKTRGKRRLKRFKNEWTRVLV 906
>gb|AAX95472.1| SWIM zinc finger, putative [Oryza sativa (japonica cultivar-group)]
Length = 1187
Score = 102 bits (254), Expect = 3e-20
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 186 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 245
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G + +F ++D I K+ H V + + + + + R G
Sbjct: 246 DRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRSRRGIY 305
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSH++A + + E+++
Sbjct: 306 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHILAVAGDCGISPNVYVSNYFRKEAIFHT 365
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 366 WSEEIYGFGILGSYTTLSAQVFYVP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 417
Query: 562 ERTPIPRQCWLCRHT 576
RT +C LC HT
Sbjct: 418 GRTLRCSKCDLCGHT 432
>ref|NP_915301.1| putative mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 1626
Score = 101 bits (252), Expect = 6e-20
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 606 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRILPLVAIVEFILHGTQAYFR 665
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR QK G + +F ++D I K+ H V + + + + + R G
Sbjct: 666 DRYQKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRSRRGIY 725
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+AA + + E+++
Sbjct: 726 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHT 785
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 786 WSEEIYGFGISGSYTTLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 837
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 838 GRTLRCSKCDLRGHT 852
>gb|AAP51873.1| putative mutator-like transposase [Oryza sativa (japonica
cultivar-group)] gi|37530568|ref|NP_919586.1| putative
mutator-like transposase [Oryza sativa (japonica
cultivar-group)] gi|17047024|gb|AAL34929.1| Putative
mutator-like transposase [Oryza sativa]
Length = 1597
Score = 100 bits (250), Expect = 1e-19
Identities = 71/255 (27%), Positives = 121/255 (46%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 606 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 665
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G + +F ++D I K+ H V + + + + + R G
Sbjct: 666 DRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRSRRGIY 725
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+AA + + E+++
Sbjct: 726 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHT 785
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 786 WSEEIYGFGISGSYTTLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 837
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 838 GRTLRCSKCDLLGHT 852
>gb|AAX92808.1| transposon protein, putative, mutator sub-class [Oryza sativa
(japonica cultivar-group)]
Length = 1597
Score = 100 bits (250), Expect = 1e-19
Identities = 71/255 (27%), Positives = 121/255 (46%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 606 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 665
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G + +F ++D I K+ H V + + + + + R G
Sbjct: 666 DRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRSRRGIY 725
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+AA + + E+++
Sbjct: 726 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHT 785
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 786 WSEEIYGFGISGSYTTLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 837
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 838 GRTLRCSKCDLLGHT 852
>gb|AAP53004.1| putative transposase related protein [Oryza sativa (japonica
cultivar-group)] gi|37532830|ref|NP_920717.1| putative
transposase related protein [Oryza sativa (japonica
cultivar-group)] gi|20303617|gb|AAM19044.1| putative
transposase related protein [Oryza sativa (japonica
cultivar-group)]
Length = 1557
Score = 100 bits (249), Expect = 1e-19
Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 579 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 638
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G + +F ++D I K+ H V + + + + + R G
Sbjct: 639 DRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRSRRGIY 698
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+ A S + + E+++
Sbjct: 699 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLTAASDCGISPNVYVSNYFRKEAIFHT 758
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ ++ + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 759 WSEEIYGFGISGSYTMLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 810
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 811 GRTLRCSKCDLRGHT 825
>gb|AAP53990.1| putative mutator protein [Oryza sativa (japonica cultivar-group)]
gi|37534802|ref|NP_921703.1| putative mutator protein
[Oryza sativa (japonica cultivar-group)]
Length = 1656
Score = 100 bits (248), Expect = 2e-19
Identities = 71/255 (27%), Positives = 121/255 (46%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 606 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 665
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G + +F ++D I K+ H V + + + + + R G
Sbjct: 666 DRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRSRRGIY 725
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+AA + + E+++
Sbjct: 726 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHT 785
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 786 WSEEIYGFGISGSYTTLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 837
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 838 GRTLRCSKCDLRGHT 852
>emb|CAE01942.2| OSJNBa0073L13.4 [Oryza sativa (japonica cultivar-group)]
gi|50921337|ref|XP_471029.1| OSJNBa0073L13.4 [Oryza
sativa (japonica cultivar-group)]
Length = 1342
Score = 100 bits (248), Expect = 2e-19
Identities = 71/255 (27%), Positives = 121/255 (46%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 477 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 536
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G + +F ++D I K+ H V + + + + + R G
Sbjct: 537 DRYKKIGPSMADNNIVFGNVVTKYMEDKIKKAQRHRVVAQGTQVHRYEIMCVDRSRRGIY 596
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+AA + + E+++
Sbjct: 597 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHT 656
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 657 WSEEIYGFGISGSYTTLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 708
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 709 GRTLRCSKCDLRGHT 723
>ref|XP_474655.1| OSJNBa0052P16.6 [Oryza sativa (japonica cultivar-group)]
gi|38569201|emb|CAE04557.3| OSJNBa0052P16.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1489
Score = 100 bits (248), Expect = 2e-19
Identities = 71/255 (27%), Positives = 121/255 (46%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 455 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 514
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G + +F ++D I K+ H V + + + + + R G
Sbjct: 515 DRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHQYEIMCVDRSRRGIY 574
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+AA + + E+++
Sbjct: 575 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHT 634
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 635 WSEEIYGFGISGSYTTLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 686
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 687 GRTLRCSKCDLRGHT 701
>emb|CAI44652.1| OSJNBa0096F01.20 [Oryza sativa (japonica cultivar-group)]
Length = 1422
Score = 100 bits (248), Expect = 2e-19
Identities = 71/255 (27%), Positives = 121/255 (46%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 455 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 514
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G + +F ++D I K+ H V + + + + + R G
Sbjct: 515 DRYKKIGPSMADNNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHQYEIMCVDRSRRGIY 574
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+AA + + E+++
Sbjct: 575 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHT 634
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 635 WSEEIYGFGISGSYTTLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 686
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 687 GRTLRCSKCDLRGHT 701
>gb|AAP54160.1| putative transposase [Oryza sativa (japonica cultivar-group)]
gi|37535142|ref|NP_921873.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
gi|22758321|gb|AAN05525.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 1597
Score = 99.8 bits (247), Expect = 2e-19
Identities = 71/255 (27%), Positives = 120/255 (46%), Gaps = 25/255 (9%)
Query: 339 WVDNIPKENWTQAYD-EGRRWGHMTSNIVESWNFVFKGTRNLPVTPIVQSTYYRLACFFA 397
W++N PKE W+ +D +G R+G MT+N+ E +N+V +G R LP+ IV+ + +F
Sbjct: 606 WIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMRGVRVLPLVAIVEFILHGTQAYFR 665
Query: 398 DRAQK-GFVRVGSGDLFTEYCQNAIKDDIVKSNTHHVEQFNRERYTFSVREIVNYREG-- 454
DR +K G +F ++D I K+ H V + + + + + R G
Sbjct: 666 DRYKKIGPSMADDNIVFGNVVTKYMEDKIKKARRHRVVAQGTQVHRYEIMCVDRSRRGIY 725
Query: 455 RPMRTFKVDLRAG---WCDCGKFQALHLPCSHVIAACSSFRHDYTTLIPGVLKNESVYSI 511
R + L+A C C K + HLPCSHV+AA + + E+++
Sbjct: 726 RKQAVQECVLKADGGCTCSCMKPKLHHLPCSHVLAAAGDCGISPNVYVSNYFRKEAIFHT 785
Query: 512 YNT---------TFKVVQDKSYWLPYDGPVLCHNPNMRRLKKGRPNSTRIRTEMDE-EVV 561
++ ++ + + +++P +P+ R+KKGR + RIR +MDE E
Sbjct: 786 WSEEIYGFGISGSYTTLSAQVFYIP--------DPSKLRVKKGRRQTRRIRNDMDESEAG 837
Query: 562 ERTPIPRQCWLCRHT 576
RT +C L HT
Sbjct: 838 GRTLRCSKCDLRGHT 852
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.339 0.146 0.487
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 914,126,424
Number of Sequences: 2540612
Number of extensions: 36002480
Number of successful extensions: 103782
Number of sequences better than 10.0: 250
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 103016
Number of HSP's gapped (non-prelim): 420
length of query: 584
length of database: 863,360,394
effective HSP length: 134
effective length of query: 450
effective length of database: 522,918,386
effective search space: 235313273700
effective search space used: 235313273700
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 78 (34.7 bits)
Medicago: description of AC140913.5