BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140913.1 - phase: 0 /pseudo
         (695 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAA66482.1| transcription factor [Vicia faba] gi|7488864|pir...   169  3e-40
dbj|BAB11464.1| transcription factor-like protein [Arabidopsis t...    81  1e-13
ref|NP_198973.2| zinc finger (MIZ type) family protein [Arabidop...    81  1e-13
dbj|BAD67847.1| putative transcription factor [Oryza sativa (jap...    62  8e-08
ref|NP_172366.2| zinc finger (MIZ type) family protein [Arabidop...    40  0.34

>emb|CAA66482.1| transcription factor [Vicia faba] gi|7488864|pir||T12184 probable
           transcription factor - fava bean
          Length = 828

 Score =  169 bits (428), Expect = 3e-40
 Identities = 89/112 (79%), Positives = 95/112 (84%), Gaps = 2/112 (1%)

Query: 1   METNTSSPLSTLPESGAMTATANPVSPSLVNLYRITKVLERLATHFVPGNRSDAFEFFNL 60
           ME+NTSS +   P+  A   T NPVSPSLVNLYRITKVL+RLA HF PGNRSD+FEFFNL
Sbjct: 1   MESNTSSSMP--PDLAATNGTTNPVSPSLVNLYRITKVLDRLAFHFQPGNRSDSFEFFNL 58

Query: 61  CLSLSRGIDYALANGEVPLKANELPILMKQMYQRKTDDHSQAAVMVLMISVK 112
           CLSLSRGIDYALANGE P KANELP LMKQMYQRKTD+ S AAVMVLMISVK
Sbjct: 59  CLSLSRGIDYALANGEPPPKANELPTLMKQMYQRKTDELSLAAVMVLMISVK 110


>dbj|BAB11464.1| transcription factor-like protein [Arabidopsis thaliana]
          Length = 719

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 41/96 (42%), Positives = 60/96 (61%)

Query: 17  AMTATANPVSPSLVNLYRITKVLERLATHFVPGNRSDAFEFFNLCLSLSRGIDYALANGE 76
           A T      + SLVN +R+  V +RL  H   G + D  EF   C+S ++GID+A+AN +
Sbjct: 11  AGTGLREKTAASLVNSFRLASVTQRLRYHIQDGAKVDPKEFQICCISFAKGIDFAIANND 70

Query: 77  VPLKANELPILMKQMYQRKTDDHSQAAVMVLMISVK 112
           +P K  E P L+KQ+ +  TD +++ A+MVLMISVK
Sbjct: 71  IPKKVEEFPWLLKQLCRHGTDVYTKTALMVLMISVK 106


>ref|NP_198973.2| zinc finger (MIZ type) family protein [Arabidopsis thaliana]
          Length = 703

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 41/96 (42%), Positives = 60/96 (61%)

Query: 17  AMTATANPVSPSLVNLYRITKVLERLATHFVPGNRSDAFEFFNLCLSLSRGIDYALANGE 76
           A T      + SLVN +R+  V +RL  H   G + D  EF   C+S ++GID+A+AN +
Sbjct: 11  AGTGLREKTAASLVNSFRLASVTQRLRYHIQDGAKVDPKEFQICCISFAKGIDFAIANND 70

Query: 77  VPLKANELPILMKQMYQRKTDDHSQAAVMVLMISVK 112
           +P K  E P L+KQ+ +  TD +++ A+MVLMISVK
Sbjct: 71  IPKKVEEFPWLLKQLCRHGTDVYTKTALMVLMISVK 106


>dbj|BAD67847.1| putative transcription factor [Oryza sativa (japonica
           cultivar-group)]
          Length = 872

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 33/85 (38%), Positives = 55/85 (63%), Gaps = 2/85 (2%)

Query: 30  VNLYRITKVLERLATHFVPGNRS--DAFEFFNLCLSLSRGIDYALANGEVPLKANELPIL 87
           +N  R+  + +RL THF  G  +  +  +  +L  + +RGID+AL++G+VP  A+E+P +
Sbjct: 34  MNARRLVMIGDRLRTHFRGGGGTVLEPPDLAHLVYAFARGIDFALSSGDVPTVASEIPSI 93

Query: 88  MKQMYQRKTDDHSQAAVMVLMISVK 112
           +K++Y    D   Q++VMVLMIS K
Sbjct: 94  LKKVYLVGKDQFLQSSVMVLMISCK 118


>ref|NP_172366.2| zinc finger (MIZ type) family protein [Arabidopsis thaliana]
          Length = 842

 Score = 39.7 bits (91), Expect = 0.34
 Identities = 21/46 (45%), Positives = 30/46 (64%), Gaps = 1/46 (2%)

Query: 68  IDYALANGEVPLKANELPILMKQMYQRKTDDH-SQAAVMVLMISVK 112
           ID A+   EVP    EL +++  + +RK DD+ ++A VM LMISVK
Sbjct: 44  IDAAIGRNEVPGNIQELALILNNVCRRKCDDYQTRAVVMALMISVK 89


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.357    0.160    0.557 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 970,347,483
Number of Sequences: 2540612
Number of extensions: 34130797
Number of successful extensions: 143936
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 143929
Number of HSP's gapped (non-prelim): 6
length of query: 695
length of database: 863,360,394
effective HSP length: 135
effective length of query: 560
effective length of database: 520,377,774
effective search space: 291411553440
effective search space used: 291411553440
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 79 (35.0 bits)