BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140849.7 + phase: 0 /pseudo/partial
(191 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_481363.1| putative threonyl-tRNA synthetase [Oryza sativa... 196 2e-49
emb|CAA74705.1| threonyl-tRNA synthetase [Arabidopsis thaliana] ... 195 5e-49
gb|AAO64760.1| At5g26830/F2P16_90 [Arabidopsis thaliana] gi|1508... 195 5e-49
ref|NP_198035.2| threonyl-tRNA synthetase / threonine--tRNA liga... 195 5e-49
gb|AAB61048.1| Similar to threonyl-tRNA synthetase; coded for by... 170 2e-41
emb|CAC79651.1| threonyl-tRNA synthetase [Oryza sativa (japonica... 155 6e-37
emb|CAG08617.1| unnamed protein product [Tetraodon nigroviridis] 134 2e-30
ref|NP_758514.1| threonyl-tRNA synthetase-like 2 [Mus musculus] ... 123 3e-27
ref|XP_536172.1| PREDICTED: similar to FLJ25005 protein [Canis f... 123 3e-27
ref|XP_413774.1| PREDICTED: similar to FLJ25005 protein [Gallus ... 123 3e-27
dbj|BAC30749.1| unnamed protein product [Mus musculus] 123 3e-27
ref|NP_001014042.1| hypothetical LOC308701 [Rattus norvegicus] g... 121 9e-27
gb|EAK86112.1| hypothetical protein UM04848.1 [Ustilago maydis 5... 119 4e-26
gb|AAW41750.1| threonine-tRNA ligase, putative [Cryptococcus neo... 102 4e-21
gb|AAL94807.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum... 83 4e-15
ref|ZP_00129320.1| COG0441: Threonyl-tRNA synthetase [Desulfovib... 80 3e-14
gb|AAP09286.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14... 80 4e-14
gb|AAH83525.1| Zgc:92586 [Danio rerio] gi|54400362|ref|NP_001005... 80 4e-14
ref|YP_011750.1| threonyl-tRNA synthetase [Desulfovibrio vulgari... 79 5e-14
ref|ZP_00144407.1| Threonyl-tRNA synthetase [Fusobacterium nucle... 79 5e-14
>ref|XP_481363.1| putative threonyl-tRNA synthetase [Oryza sativa (japonica
cultivar-group)] gi|38175524|dbj|BAD01219.1| putative
threonyl-tRNA synthetase [Oryza sativa (japonica
cultivar-group)] gi|38175707|dbj|BAD01414.1| putative
threonyl-tRNA synthetase [Oryza sativa (japonica
cultivar-group)]
Length = 745
Score = 196 bits (499), Expect = 2e-49
Identities = 113/206 (54%), Positives = 135/206 (64%), Gaps = 21/206 (10%)
Query: 6 HGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQA 62
+GCKLCIGPCTT GFYYDA Y +L L + F II++ A K V EKQP IEV+R +A
Sbjct: 197 YGCKLCIGPCTTRGEGFYYDAYYNDLTLNETHFGIIDAQAQKAVAEKQPFERIEVSRAEA 256
Query: 63 LEIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRAC----LEFPGFFSILEGGQ---K 115
LE+F+++KFKVEIIN L D+TITVYRCGPLVDL R F F+ L+ +
Sbjct: 257 LEMFAENKFKVEIINELPEDKTITVYRCGPLVDLCRGPHIPNTSFVKAFACLKASSSYWR 316
Query: 116 *KKFTECLWHIVS*S-------KEFK----EAKKYDHRILGLKQELVSLHEWSPGSWFFL 164
K E L + S KE+K EAKK DHR+LG Q+L H+ SPGS FFL
Sbjct: 317 GKADRESLQRVYGISFPDSKRLKEYKHLLEEAKKRDHRLLGQTQDLFFFHQLSPGSCFFL 376
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEV 190
PHGA+IYNKLMDF+R QYR RGYQEV
Sbjct: 377 PHGAIIYNKLMDFLRQQYRDRGYQEV 402
>emb|CAA74705.1| threonyl-tRNA synthetase [Arabidopsis thaliana]
gi|11271129|pir||T51624 threonine-tRNA ligase (EC
6.1.1.3) [imported] - Arabidopsis thaliana
Length = 709
Score = 195 bits (496), Expect = 5e-49
Identities = 112/207 (54%), Positives = 129/207 (62%), Gaps = 21/207 (10%)
Query: 5 KHGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQ 61
++GC+LCIGPCTT GFYYD Y LGL D F IE+GA K E QP IEVT+DQ
Sbjct: 160 EYGCQLCIGPCTTRGEGFYYDGFYGELGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQ 219
Query: 62 ALEIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRAC----LEFPGFFSILEGGQ--- 114
ALE+FS++ FKVE+IN L D TITVYRCGPLVDL R F F L
Sbjct: 220 ALEMFSENNFKVELINGLPADMTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYW 279
Query: 115 K*KKFTECLWHIVS*S----KEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFF 163
K K E L + S K+ K EAKKYDHR+LG KQEL H+ SPGS+FF
Sbjct: 280 KGDKDRESLQRVYGISYPDQKQLKKYLQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFF 339
Query: 164 LPHGALIYNKLMDFIRNQYRHRGYQEV 190
LP G +YN+LMDFI+NQY HRGY EV
Sbjct: 340 LPLGTRVYNRLMDFIKNQYWHRGYTEV 366
>gb|AAO64760.1| At5g26830/F2P16_90 [Arabidopsis thaliana]
gi|15081626|gb|AAK82468.1| AT5g26830/F2P16_90
[Arabidopsis thaliana]
Length = 676
Score = 195 bits (496), Expect = 5e-49
Identities = 112/207 (54%), Positives = 129/207 (62%), Gaps = 21/207 (10%)
Query: 5 KHGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQ 61
++GC+LCIGPCTT GFYYD Y LGL D F IE+GA K E QP IEVT+DQ
Sbjct: 127 EYGCQLCIGPCTTRGEGFYYDGFYGELGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQ 186
Query: 62 ALEIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRAC----LEFPGFFSILEGGQ--- 114
ALE+FS++ FKVE+IN L D TITVYRCGPLVDL R F F L
Sbjct: 187 ALEMFSENNFKVELINGLPADMTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYW 246
Query: 115 K*KKFTECLWHIVS*S----KEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFF 163
K K E L + S K+ K EAKKYDHR+LG KQEL H+ SPGS+FF
Sbjct: 247 KGDKDRESLQRVYGISYPDQKQLKKYLQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFF 306
Query: 164 LPHGALIYNKLMDFIRNQYRHRGYQEV 190
LP G +YN+LMDFI+NQY HRGY EV
Sbjct: 307 LPLGTRVYNRLMDFIKNQYWHRGYTEV 333
>ref|NP_198035.2| threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)
[Arabidopsis thaliana] gi|27735258|sp|O04630|SYTM_ARATH
Threonyl-tRNA synthetase, mitochondrial precursor
(Threonine--tRNA ligase) (ThrRS)
Length = 709
Score = 195 bits (496), Expect = 5e-49
Identities = 112/207 (54%), Positives = 129/207 (62%), Gaps = 21/207 (10%)
Query: 5 KHGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQ 61
++GC+LCIGPCTT GFYYD Y LGL D F IE+GA K E QP IEVT+DQ
Sbjct: 160 EYGCQLCIGPCTTRGEGFYYDGFYGELGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQ 219
Query: 62 ALEIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRAC----LEFPGFFSILEGGQ--- 114
ALE+FS++ FKVE+IN L D TITVYRCGPLVDL R F F L
Sbjct: 220 ALEMFSENNFKVELINGLPADMTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYW 279
Query: 115 K*KKFTECLWHIVS*S----KEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFF 163
K K E L + S K+ K EAKKYDHR+LG KQEL H+ SPGS+FF
Sbjct: 280 KGDKDRESLQRVYGISYPDQKQLKKYLQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFF 339
Query: 164 LPHGALIYNKLMDFIRNQYRHRGYQEV 190
LP G +YN+LMDFI+NQY HRGY EV
Sbjct: 340 LPLGTRVYNRLMDFIKNQYWHRGYTEV 366
>gb|AAB61048.1| Similar to threonyl-tRNA synthetase; coded for by A. thaliana cDNA
R65376 [Arabidopsis thaliana] gi|7437517|pir||T01763
threonine-tRNA ligase (EC 6.1.1.3) - Arabidopsis
thaliana
Length = 702
Score = 170 bits (431), Expect = 2e-41
Identities = 102/191 (53%), Positives = 116/191 (60%), Gaps = 21/191 (10%)
Query: 21 GFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQALEIFSDDKFKVEIIN 77
GFYYD Y LGL D F IE+GA K E QP IEVT+DQALE+FS++ FKVE+IN
Sbjct: 156 GFYYDGFYGELGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENNFKVELIN 215
Query: 78 NLAPDETITVYRCGPLVDLYRAC----LEFPGFFSILEGGQ---K*KKFTECLWHIVS*S 130
L D TITVYRCGPLVDL R F F L K K E L + S
Sbjct: 216 GLPADMTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYWKGDKDRESLQRVYGIS 275
Query: 131 ----KEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFFLPHGALIYNKLMDFIR 179
K+ K EAKKYDHR+LG KQEL H+ SPGS+FFLP G +YN+LMDFI+
Sbjct: 276 YPDQKQLKKYLQFLEEAKKYDHRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIK 335
Query: 180 NQYRHRGYQEV 190
NQY HRGY EV
Sbjct: 336 NQYWHRGYTEV 346
>emb|CAC79651.1| threonyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)]
Length = 531
Score = 155 bits (392), Expect = 6e-37
Identities = 95/182 (52%), Positives = 116/182 (63%), Gaps = 21/182 (11%)
Query: 30 NLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQALEIFSDDKFKVEIINNLAPDETIT 86
+L L + F II++ A K V EKQP IEV+R +ALE+F+++KFKVEIIN L D+TIT
Sbjct: 7 DLTLNETHFGIIDAQAQKAVAEKQPFERIEVSRAEALEMFAENKFKVEIINELPEDKTIT 66
Query: 87 VYRCGPLVDLYRAC----LEFPGFFSILEGGQ---K*KKFTECLWHIVS*S-------KE 132
VYRCGPLVDL R F F+ L+ + K E L + S KE
Sbjct: 67 VYRCGPLVDLCRGPHIPNTSFVKAFACLKASSSYWRGKADRESLQRVYGISFPDSKRLKE 126
Query: 133 FK----EAKKYDHRILGLKQELVSLHEWSPGSWFFLPHGALIYNKLMDFIRNQYRHRGYQ 188
+K EAKK DHR+LG Q+L H+ SPGS FFLPHGA+IYNKLMDF+R QYR RGYQ
Sbjct: 127 YKHLLEEAKKRDHRLLGQTQDLFFFHQLSPGSCFFLPHGAIIYNKLMDFLRQQYRDRGYQ 186
Query: 189 EV 190
EV
Sbjct: 187 EV 188
>emb|CAG08617.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 134 bits (336), Expect = 2e-30
Identities = 88/205 (42%), Positives = 114/205 (54%), Gaps = 24/205 (11%)
Query: 7 GCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQAL 63
GC LC GP ENGFYYD N G+ F +E+ K++ EKQP +E+ ++ L
Sbjct: 162 GC-LCYGP--PIENGFYYDMFLENEGVSSNDFPCLENLCKKIIKEKQPFERLEIKKETLL 218
Query: 64 EIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYRA-CLEFPGFFSILEGGQ------K* 116
E+F +KFK I+N T TVYRCGPL+DL R + G L+ + +
Sbjct: 219 EMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEG 278
Query: 117 KKFTECLWHIVS*S-------KEF----KEAKKYDHRILGLKQELVSLHEWSPGSWFFLP 165
K E L I S KE+ +EAK DHR LG +QEL H+ SPGS FFLP
Sbjct: 279 KADMESLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKLGREQELFFFHDLSPGSCFFLP 338
Query: 166 HGALIYNKLMDFIRNQYRHRGYQEV 190
GA IYN L++FIR++YR RG+QEV
Sbjct: 339 KGAFIYNTLIEFIRSEYRRRGFQEV 363
>ref|NP_758514.1| threonyl-tRNA synthetase-like 2 [Mus musculus]
gi|24657723|gb|AAH39225.1| Threonyl-tRNA synthetase-like
2 [Mus musculus]
Length = 790
Score = 123 bits (308), Expect = 3e-27
Identities = 79/206 (38%), Positives = 103/206 (49%), Gaps = 23/206 (11%)
Query: 6 HGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQA 62
+G LC GP ENGFYYD + + + +E+ ++ EKQP +EV++D
Sbjct: 236 YGGHLCYGP--PIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDTL 293
Query: 63 LEIFSDDKFKVEIINNLAPDETITVYRCGPLVDL-----------YRACLEFPGFFSILE 111
LE+F +KFK I+ T TVYRCGPL+DL +A F + E
Sbjct: 294 LEMFKYNKFKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSSTYWE 353
Query: 112 GGQK*KKFTECLWHIVS*SKEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFFL 164
G + + SK K EAK DHR +G +QEL H+ SPGS FFL
Sbjct: 354 GNPEMETLQRIYGISFPDSKMMKDWEKIQEEAKSRDHRKIGKEQELFFFHDLSPGSCFFL 413
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEV 190
P GA IYN LMDFIR +Y R + EV
Sbjct: 414 PRGAFIYNALMDFIREEYHKRNFTEV 439
>ref|XP_536172.1| PREDICTED: similar to FLJ25005 protein [Canis familiaris]
Length = 834
Score = 123 bits (308), Expect = 3e-27
Identities = 80/210 (38%), Positives = 106/210 (50%), Gaps = 31/210 (14%)
Query: 6 HGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQA 62
+G LC GP ENGFYYD + + + +E+ ++ EKQP +E++++
Sbjct: 280 YGGHLCYGP--PIENGFYYDMFIEDRAVSSTELSALENICKTIIKEKQPFERLEISKEVL 337
Query: 63 LEIFSDDKFKVEIINNLAPDETITVYRCGPLVDL-----------YRACLEFPGFFSILE 111
LE+F +KFK I+N T TVYRCGPL+DL +A F + E
Sbjct: 338 LEMFKYNKFKCRILNEKVHTSTTTVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSSTYWE 397
Query: 112 GGQK*KKFTECLWHIVS*S-----------KEFKEAKKYDHRILGLKQELVSLHEWSPGS 160
G + E L I S K +EAK DHR +G +QEL H+ SPGS
Sbjct: 398 GNPE----METLQRIYGISFPDNKMMKTWEKFQEEAKNRDHRKVGKEQELFFFHDLSPGS 453
Query: 161 WFFLPHGALIYNKLMDFIRNQYRHRGYQEV 190
FFLP GA IYN LMDFIR +Y R + EV
Sbjct: 454 CFFLPRGAFIYNTLMDFIREEYHRRNFTEV 483
>ref|XP_413774.1| PREDICTED: similar to FLJ25005 protein [Gallus gallus]
Length = 784
Score = 123 bits (308), Expect = 3e-27
Identities = 83/209 (39%), Positives = 108/209 (50%), Gaps = 32/209 (15%)
Query: 7 GCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQAL 63
GC LC GP ENGFYYD + G+ +F +E+ ++ EKQP +EV ++ L
Sbjct: 232 GC-LCYGP--PIENGFYYDMYIEDRGVSSTEFPALENRCKNIIKEKQPFERLEVKKEILL 288
Query: 64 EIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYR-----------ACLEFPGFFSILEG 112
++F +KFK I+N T TVYRCGPL+DL R A F + EG
Sbjct: 289 DMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIFKNSSTYWEG 348
Query: 113 GQK*KKFTECLWHIVS*S-------KEF----KEAKKYDHRILGLKQELVSLHEWSPGSW 161
K E L I S KE+ +EA+ DHR +G +QEL H+ SPGS
Sbjct: 349 ----KADMETLQRIYGISFPDNKMMKEWEKFQEEARNRDHRKIGKEQELFFFHDLSPGSC 404
Query: 162 FFLPHGALIYNKLMDFIRNQYRHRGYQEV 190
FFLP GA +YN L DFIR +Y R + EV
Sbjct: 405 FFLPRGAFLYNTLTDFIREEYHRRNFTEV 433
>dbj|BAC30749.1| unnamed protein product [Mus musculus]
Length = 790
Score = 123 bits (308), Expect = 3e-27
Identities = 79/206 (38%), Positives = 103/206 (49%), Gaps = 23/206 (11%)
Query: 6 HGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQA 62
+G LC GP ENGFYYD + + + +E+ ++ EKQP +EV++D
Sbjct: 236 YGGHLCYGP--PIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDTL 293
Query: 63 LEIFSDDKFKVEIINNLAPDETITVYRCGPLVDL-----------YRACLEFPGFFSILE 111
LE+F +KFK I+ T TVYRCGPL+DL +A F + E
Sbjct: 294 LEMFKYNKFKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSSTYWE 353
Query: 112 GGQK*KKFTECLWHIVS*SKEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFFL 164
G + + SK K EAK DHR +G +QEL H+ SPGS FFL
Sbjct: 354 GNPEMETLQRIYGISFPDSKMMKDWEKFQEEAKSRDHRKIGKEQELFFFHDLSPGSCFFL 413
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEV 190
P GA IYN LMDFIR +Y R + EV
Sbjct: 414 PRGAFIYNALMDFIREEYHKRNFTEV 439
>ref|NP_001014042.1| hypothetical LOC308701 [Rattus norvegicus]
gi|54035500|gb|AAH83878.1| Hypothetical LOC308701
[Rattus norvegicus]
Length = 553
Score = 121 bits (304), Expect = 9e-27
Identities = 77/206 (37%), Positives = 103/206 (49%), Gaps = 23/206 (11%)
Query: 6 HGCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQA 62
+G LC GP ENGFYYD + + + +E+ ++ EKQP +EV++D
Sbjct: 236 YGGHLCYGP--PIENGFYYDMFIGDRVVSSTELSALENICKTIIKEKQPFERLEVSKDSL 293
Query: 63 LEIFSDDKFKVEIINNLAPDETITVYRCGPLVDL-----------YRACLEFPGFFSILE 111
LE+F +KFK I+ T TVYRCGPL+DL +A F + E
Sbjct: 294 LEMFKYNKFKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSSTYWE 353
Query: 112 GGQK*KKFTECLWHIVS*SKEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFFL 164
G + + SK + EA+ DHR +G +QEL H+ SPGS FFL
Sbjct: 354 GNPEMETLQRVYGISFPDSKMMRDWEKFQEEARSRDHRKIGKEQELFFFHDLSPGSCFFL 413
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEV 190
P GA IYN LMDFIR +Y R + EV
Sbjct: 414 PRGAFIYNTLMDFIREEYHKRNFTEV 439
>gb|EAK86112.1| hypothetical protein UM04848.1 [Ustilago maydis 521]
gi|49077126|ref|XP_402463.1| hypothetical protein
UM04848.1 [Ustilago maydis 521]
Length = 759
Score = 119 bits (298), Expect = 4e-26
Identities = 82/211 (38%), Positives = 113/211 (52%), Gaps = 29/211 (13%)
Query: 6 HGCKLCIGPCTTTENGFYYDAIYCNLG---LKDYQFKIIESGAFKVVVEKQPIE---VTR 59
+GC LCIGP TE GF+Y+ + G + F +E+ EKQ E V++
Sbjct: 194 YGCHLCIGP--PTEEGFFYEMAMGDSGERMISQSDFGALETLIKNATKEKQKFERLVVSK 251
Query: 60 DQALEIFSDDKFKVEIINNLAPDET-ITVYRCGPLVDL-----------YRACLEFPGFF 107
+Q LE+F+ +K+K II + PD T TVYRCGP++DL +A
Sbjct: 252 EQLLEMFNYNKYKQHIIQSKIPDGTSTTVYRCGPMIDLCVGPHIPHTGRIKAMTVLKNSA 311
Query: 108 SILEGGQK*KKFTECLWHI-------VS*SKEF-KEAKKYDHRILGLKQELVSLHEWSPG 159
S G Q + L+ I +S K+F EA K DHR +G +QEL HE SPG
Sbjct: 312 SYFLGDQN-NDSLQRLYGISFPDAKQMSEYKQFLLEAAKRDHRKIGKEQELFMFHELSPG 370
Query: 160 SWFFLPHGALIYNKLMDFIRNQYRHRGYQEV 190
S F+LPHGA IYN L +F++++YR RG+ EV
Sbjct: 371 SCFWLPHGARIYNTLQEFLKSEYRQRGFDEV 401
>gb|AAW41750.1| threonine-tRNA ligase, putative [Cryptococcus neoformans var.
neoformans JEC21] gi|50259678|gb|EAL22348.1|
hypothetical protein CNBB5220 [Cryptococcus neoformans
var. neoformans B-3501A] gi|58263294|ref|XP_569057.1|
threonine-tRNA ligase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 772
Score = 102 bits (255), Expect = 4e-21
Identities = 76/207 (36%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 7 GCKLCIGPCTTTENGFYYDAIYCN-LGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQA 62
GC L GP E GF+YD N + +K IE V EKQP +E+ ++
Sbjct: 209 GCCLGYGP-PLEEGGFFYDMSLANGRTISQDDYKPIEDVCKAAVKEKQPFERLELPKEVL 267
Query: 63 LEIFSDDKFKVEIINNLAPDETI-TVYRCGPLVDL-----------YRACLEFPGFFSIL 110
LE+F +K+K I + PD T TVYRCGPL+DL ++ S
Sbjct: 268 LEMFKYNKYKQHYIQDKVPDGTSSTVYRCGPLIDLCLGPHVPHTGRIKSLAVTKNSSSYF 327
Query: 111 EGGQK*KKFTECLWHIVS*SKEFKEAKKY-------DHRILGLKQELVSLHEWSPGSWFF 163
G K F + + KE KKY DHR +G QEL ++ SPGS FF
Sbjct: 328 LGDAKNDTFQRVYGMSFPDNAQMKEYKKYLEEAAKRDHRKIGKDQELFIFNDLSPGSAFF 387
Query: 164 LPHGALIYNKLMDFIRNQYRHRGYQEV 190
LP G IYN LM FI+++Y RG+ EV
Sbjct: 388 LPMGMRIYNTLMSFIKDEYFKRGFSEV 414
>gb|AAL94807.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586] gi|19703946|ref|NP_603508.1| Threonyl-tRNA
synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586] gi|22654111|sp|Q8RFS6|SYT_FUSNN
Threonyl-tRNA synthetase (Threonine--tRNA ligase)
(ThrRS)
Length = 620
Score = 83.2 bits (204), Expect = 4e-15
Identities = 64/207 (30%), Positives = 99/207 (46%), Gaps = 27/207 (13%)
Query: 9 KLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQALEI 65
K+ IGP ENGFYYD ++ + IE+ ++V E +E + RD+A+E
Sbjct: 72 KVTIGP--VIENGFYYDFDPVEQFTEE-DLEKIEAEMKRIVKENIKLEKYVLPRDEAIEY 128
Query: 66 FSD---DKFKVEIINNLAPDETITVYRCGPLVDLYRAC-LEFPGFFSILE---------- 111
F D +K+KVE++ + E ++ Y+ G DL R + G+ +
Sbjct: 129 FRDVDKNKYKVEVVEGIPQGEQVSFYKQGDFTDLCRGTHVPSTGYLKAFKLRTVAGAYWR 188
Query: 112 GGQK*KKFTECLWHIVS*SKEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFFL 164
G K K + S + K EA+K DHR LG + EL L E+ PG FFL
Sbjct: 189 GNSKNKMLQRIYGYSFSNEERLKHHLKLMEEAEKRDHRKLGKELELFFLSEYGPGFPFFL 248
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEVK 191
P G ++ N L+D R ++ GYQ+++
Sbjct: 249 PKGMIVRNVLIDLWRREHEKAGYQQLE 275
>ref|ZP_00129320.1| COG0441: Threonyl-tRNA synthetase [Desulfovibrio desulfuricans G20]
Length = 644
Score = 80.1 bits (196), Expect = 3e-14
Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 28/209 (13%)
Query: 7 GCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQAL 63
G K+ IGP ENGFYYD Y D + IE+ K++ P E +++D+A
Sbjct: 89 GVKVTIGPAI--ENGFYYDFDYERPFTAD-DLEAIEAEMDKIIKAAHPFERSVMSKDEAK 145
Query: 64 EIFSD--DKFKVEIINNLAPDETITVYRCGPLVDLYRA-------CLEFPGFFSIL---- 110
++F+D + +K+E+I+ + PD+ +++YR G VDL R C+ S+
Sbjct: 146 KMFADMGETYKLELIDAV-PDDIVSIYRSGDFVDLCRGPHIPDTGCINAFKLMSVAGAYW 204
Query: 111 EGGQK*KKFTECLWHIVS*SKEFK-------EAKKYDHRILGLKQELVSLHE-WSPGSWF 162
G +K + KE K EAKK DHR LG + +L S E G +
Sbjct: 205 RGDEKNAMLSRVYGTAFPDEKELKSYLNRIEEAKKRDHRKLGTQLDLFSFQEEGGSGMVY 264
Query: 163 FLPHGALIYNKLMDFIRNQYRHRGYQEVK 191
+ P GAL+ L DF R ++ RGYQ V+
Sbjct: 265 WHPKGALVRAILEDFERKEHLKRGYQIVQ 293
>gb|AAP09286.1| Threonyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|30020454|ref|NP_832085.1| Threonyl-tRNA synthetase
[Bacillus cereus ATCC 14579]
Length = 640
Score = 79.7 bits (195), Expect = 4e-14
Identities = 61/206 (29%), Positives = 106/206 (50%), Gaps = 28/206 (13%)
Query: 10 LCIGPCTTTENGFYYDA-IYCNLGLKDYQFKIIESGAFKVVVEK---QPIEVTRDQALEI 65
L +GP ENGFYYD + ++ ++D + IE K++ E + +EV+R++A ++
Sbjct: 96 LGVGP--VIENGFYYDMDLPSSVNVED--LRKIEKEMKKIINENIKIERVEVSREEAAKL 151
Query: 66 FSD--DKFKVEIINNLAPDETITVYRCGPLVDLYRAC-LEFPGFFSILE---------GG 113
F + D+ K+E++ + E++T+Y+ G VDL R L F G+ + G
Sbjct: 152 FQEMNDRLKLELLEAIPSGESVTLYKQGEFVDLCRGPHLPFTGYLKAFQLTHVSGAYWRG 211
Query: 114 QK*KKFTECLWHIVS*SKE--------FKEAKKYDHRILGLKQELVSLHEWSPGSWFFLP 165
+ + ++ + S++ +EA K +HR LG + EL E +PG F+LP
Sbjct: 212 DSNNQVLQRIYGVAFSSQKELEEYLHFVEEAAKRNHRKLGSELELFMFSEEAPGMPFYLP 271
Query: 166 HGALIYNKLMDFIRNQYRHRGYQEVK 191
G +I N+L F+R + YQEV+
Sbjct: 272 KGQMIRNELEAFLREIQKEYNYQEVR 297
>gb|AAH83525.1| Zgc:92586 [Danio rerio] gi|54400362|ref|NP_001005932.1| zgc:92586
[Danio rerio]
Length = 624
Score = 79.7 bits (195), Expect = 4e-14
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 7 GCKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQP---IEVTRDQAL 63
GC LC GP ENGFYYD N G+ F +E+ K++ EKQP +EV ++ L
Sbjct: 166 GC-LCYGP--PIENGFYYDMYLDNEGVSSNDFPCLENLCKKIIKEKQPFERLEVKKETLL 222
Query: 64 EIFSDDKFKVEIINNLAPDETITVYRCGPLVDLYR 98
E+F +KFK I+N T TVYRCGPL+DL R
Sbjct: 223 EMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLCR 257
>ref|YP_011750.1| threonyl-tRNA synthetase [Desulfovibrio vulgaris subsp. vulgaris
str. Hildenborough] gi|46450362|gb|AAS97010.1|
threonyl-tRNA synthetase [Desulfovibrio vulgaris subsp.
vulgaris str. Hildenborough]
Length = 644
Score = 79.3 bits (194), Expect = 5e-14
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 28/207 (13%)
Query: 9 KLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQALEI 65
K+ IGP + +NGFYYD F+ IE K+V P E + RD+A+ +
Sbjct: 91 KVTIGP--SIDNGFYYD-FDAERPFSPEDFEAIEREMQKIVDAATPFERSEMPRDEAVAL 147
Query: 66 FSD--DKFKVEIINNLAPDETITVYRCGPLVDLYRA-CLEFPGF---FSIL-------EG 112
F + +KVEII +L P++T+++YRCG VDL R + GF F ++ G
Sbjct: 148 FEGMGETYKVEIIRDL-PNDTVSLYRCGEFVDLCRGPHIPHAGFAKAFKLMSVAGAYWRG 206
Query: 113 GQK*KKFTECLWHIVS*SKEFK-------EAKKYDHRILGLKQELVSLHE-WSPGSWFFL 164
+K + + +K K EAK+ DHR LG + +L + HE +PG F+
Sbjct: 207 DEKNPMLSRIYGTAFADAKTLKEHLHRIEEAKRRDHRKLGQQLDLFAFHEDVAPGMVFWH 266
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEVK 191
P G L+ + DF+R ++ R Y V+
Sbjct: 267 PKGMLVRTIIEDFLRKEHLKRRYDIVQ 293
>ref|ZP_00144407.1| Threonyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256] gi|27886876|gb|EAA24002.1| Threonyl-tRNA
synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 637
Score = 79.3 bits (194), Expect = 5e-14
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 27/207 (13%)
Query: 9 KLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPIE---VTRDQALEI 65
K+ IGP ENGFYYD ++ + IE+ K+V E +E + RD+A++
Sbjct: 89 KVTIGP--VIENGFYYDFDPVEQFTEE-DLEKIEAEMKKIVKENIKLEKYVLPRDEAVQY 145
Query: 66 FSD---DKFKVEIINNLAPDETITVYRCGPLVDLYRAC-LEFPGFFSILE---------- 111
F D +K+KVEI+ + E ++ Y+ G DL R + G+ +
Sbjct: 146 FRDVDKNKYKVEIVEAIPQGEQVSFYKQGDFTDLCRGTHVPSTGYLKAFKLRTVAGAYWR 205
Query: 112 GGQK*KKFTECLWHIVS*SKEFK-------EAKKYDHRILGLKQELVSLHEWSPGSWFFL 164
G K K + S K EA+K DHR LG + EL L E+ PG FFL
Sbjct: 206 GNSKNKMLQRIYGYSFSNEDRLKKHLKLMEEAEKRDHRKLGKELELFFLSEYGPGFPFFL 265
Query: 165 PHGALIYNKLMDFIRNQYRHRGYQEVK 191
P G +I N L+D R ++ GY +++
Sbjct: 266 PKGMIIRNVLIDLWRKEHEKAGYLQLE 292
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.329 0.146 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 346,596,893
Number of Sequences: 2540612
Number of extensions: 13425280
Number of successful extensions: 31180
Number of sequences better than 10.0: 417
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 30337
Number of HSP's gapped (non-prelim): 671
length of query: 191
length of database: 863,360,394
effective HSP length: 121
effective length of query: 70
effective length of database: 555,946,342
effective search space: 38916243940
effective search space used: 38916243940
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)
Medicago: description of AC140849.7