BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140721.12 - phase: 0
(109 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 93 1e-18
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 93 1e-18
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 90 2e-17
gb|AAD25596.1| putative helicase [Arabidopsis thaliana] gi|25353... 89 2e-17
ref|NP_178583.2| hypothetical protein [Arabidopsis thaliana] 89 2e-17
gb|AAD32757.1| putative helicase [Arabidopsis thaliana] gi|25353... 89 3e-17
emb|CAB87734.1| putative protein [Arabidopsis thaliana] gi|11358... 88 6e-17
gb|AAD20107.1| putative helicase [Arabidopsis thaliana] gi|25353... 87 1e-16
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 86 2e-16
ref|NP_176623.2| hypothetical protein [Arabidopsis thaliana] 86 3e-16
gb|AAG51717.1| unknown protein; 11471-16325 [Arabidopsis thalian... 86 3e-16
gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353... 85 5e-16
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 84 1e-15
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 84 1e-15
ref|NP_912900.1| unnamed protein product [Oryza sativa (japonica... 78 6e-14
dbj|BAB11364.1| helicase [Arabidopsis thaliana] 78 6e-14
gb|AAQ56555.1| hypothetical protein OSJNBa0070J19.12 [Oryza sati... 75 5e-13
ref|XP_550305.1| helicase-like protein [Oryza sativa (japonica c... 74 9e-13
ref|XP_470551.1| Putative helicase [Oryza sativa (japonica culti... 74 9e-13
emb|CAE03875.2| OSJNBb0015N08.3 [Oryza sativa (japonica cultivar... 74 9e-13
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 93.2 bits (230), Expect = 1e-18
Identities = 47/84 (55%), Positives = 61/84 (71%), Gaps = 1/84 (1%)
Query: 13 TNKLIVDELNYN-KDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTG 71
+N+LI+DEL YN + +L K +D + LT EQR ++D+I ++ D GG FF+YG+GGTG
Sbjct: 922 SNRLIIDELRYNNQSDLKKKHSDWIQKLTPEQRGIYDQITNAVFNDLGGVFFVYGFGGTG 981
Query: 72 KTFIWKTSLAVVRSKGLIVLNAAS 95
KTFIWKT A VRSKG I LN AS
Sbjct: 982 KTFIWKTLAAAVRSKGQICLNVAS 1005
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 93.2 bits (230), Expect = 1e-18
Identities = 47/84 (55%), Positives = 61/84 (71%), Gaps = 1/84 (1%)
Query: 13 TNKLIVDELNYN-KDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTG 71
+N+LI+DEL YN + +L K +D + LT EQR ++D+I ++ D GG FF+YG+GGTG
Sbjct: 913 SNRLIIDELRYNNQSDLKKKHSDWIQKLTPEQRGIYDQITNAVFNDLGGVFFVYGFGGTG 972
Query: 72 KTFIWKTSLAVVRSKGLIVLNAAS 95
KTFIWKT A VRSKG I LN AS
Sbjct: 973 KTFIWKTLAAAVRSKGQICLNVAS 996
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 89.7 bits (221), Expect = 2e-17
Identities = 47/84 (55%), Positives = 58/84 (68%), Gaps = 1/84 (1%)
Query: 13 TNKLIVDELNYNKDELTKTQTD-MLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTG 71
+N+L+VDEL YN D K + D ML EQR ++D+I + D GG FF+YG+GGTG
Sbjct: 1245 SNRLVVDELRYNIDSNLKEKHDEWFQMLNTEQRGIYDEITGAVFNDLGGVFFIYGFGGTG 1304
Query: 72 KTFIWKTSLAVVRSKGLIVLNAAS 95
KTFIWKT A VRS+G IVLN AS
Sbjct: 1305 KTFIWKTLAAAVRSRGQIVLNVAS 1328
>gb|AAD25596.1| putative helicase [Arabidopsis thaliana] gi|25353661|pir||H84464
probable helicase [imported] - Arabidopsis thaliana
Length = 1219
Score = 89.4 bits (220), Expect = 2e-17
Identities = 44/83 (53%), Positives = 58/83 (69%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI+DE Y+++ TK D + LT EQ+ V+D I+ + + GG FF+YG+GGTGK
Sbjct: 721 TNVLILDEKGYDRESETKKHADSIKKLTLEQKSVYDNIIGAVNENVGGVFFVYGFGGTGK 780
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+WKT A +RSKG IVLN AS
Sbjct: 781 TFLWKTLSAALRSKGDIVLNVAS 803
>ref|NP_178583.2| hypothetical protein [Arabidopsis thaliana]
Length = 1238
Score = 89.4 bits (220), Expect = 2e-17
Identities = 44/83 (53%), Positives = 58/83 (69%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI+DE Y+++ TK D + LT EQ+ V+D I+ + + GG FF+YG+GGTGK
Sbjct: 825 TNVLILDEKGYDRESETKKHADSIKKLTLEQKSVYDNIIGAVNENVGGVFFVYGFGGTGK 884
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+WKT A +RSKG IVLN AS
Sbjct: 885 TFLWKTLSAALRSKGDIVLNVAS 907
>gb|AAD32757.1| putative helicase [Arabidopsis thaliana] gi|25353663|pir||H84486
probable helicase [imported] - Arabidopsis thaliana
Length = 1241
Score = 88.6 bits (218), Expect = 3e-17
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
MP+P T + +N+ I +E NYN ++L + D +T EQ+ ++D+IM + + GG
Sbjct: 810 MPKP-TKEGTDHSNRFITEEKNYNVEKLKEDHDDWFNKMTSEQKEIYDEIMKAVLENSGG 868
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YG+GGTGKTF+WKT A VR KGLI +N AS
Sbjct: 869 IFFVYGFGGTGKTFMWKTLSAAVRMKGLISVNVAS 903
>emb|CAB87734.1| putative protein [Arabidopsis thaliana] gi|11358014|pir||T47300
hypothetical protein T14K23.130 - Arabidopsis thaliana
Length = 1018
Score = 87.8 bits (216), Expect = 6e-17
Identities = 44/83 (53%), Positives = 59/83 (71%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
+N+LIVDE+ Y++ LT + + MLT E+R V+D+I + D GG FF+YG+GGT K
Sbjct: 639 SNRLIVDEMRYDRQYLTGKHAEWIDMLTPEKRGVYDEITGAVFKDLGGVFFVYGFGGTRK 698
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TFIWKT A +RS+G IVLN AS
Sbjct: 699 TFIWKTLSAAIRSRGDIVLNVAS 721
>gb|AAD20107.1| putative helicase [Arabidopsis thaliana] gi|25353665|pir||H84515
probable helicase [imported] - Arabidopsis thaliana
Length = 1230
Score = 87.0 bits (214), Expect = 1e-16
Identities = 47/89 (52%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 8 DMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCV-HDKIMDSKGFDDGGFFFLYG 66
D P F N LI+DE NYN++ L K + L LT E + V HD+IMD D GG FFLY
Sbjct: 789 DEPAF-NPLIIDERNYNRESLKKKHDNWLKTLTPEHKKVYHDEIMDDVLNDKGGVFFLYA 847
Query: 67 YGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
+GGTGKTF+WK A +R KG LN AS
Sbjct: 848 FGGTGKTFLWKVLSAAIRCKGDTCLNVAS 876
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 85.9 bits (211), Expect = 2e-16
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 14 NKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGKT 73
N I+DE Y++ L + + L M+T EQ+ ++D+IMD+ D GG FF+YG+GGTGKT
Sbjct: 519 NHFILDERKYDRAYLIEKHEEWLTMVTSEQKKIYDEIMDAVLHDRGGVFFVYGFGGTGKT 578
Query: 74 FIWKTSLAVVRSKGLIVLNAAS 95
F+WK A +RSKG I LN AS
Sbjct: 579 FLWKLLSAAIRSKGDISLNVAS 600
>ref|NP_176623.2| hypothetical protein [Arabidopsis thaliana]
Length = 1231
Score = 85.5 bits (210), Expect = 3e-16
Identities = 42/82 (51%), Positives = 56/82 (68%)
Query: 14 NKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGKT 73
N I+DE Y++ LT+ + L M+T EQ+ ++D+IMD D GG FF+YG+GGTGKT
Sbjct: 781 NHFILDERKYDRAYLTEKHEEWLTMVTLEQKKIYDEIMDVVLHDRGGVFFVYGFGGTGKT 840
Query: 74 FIWKTSLAVVRSKGLIVLNAAS 95
F+WK A +RSKG I LN AS
Sbjct: 841 FLWKLLSAAIRSKGDISLNVAS 862
>gb|AAG51717.1| unknown protein; 11471-16325 [Arabidopsis thaliana]
gi|25404482|pir||C96668 unknown protein F15H21.18
[imported] - Arabidopsis thaliana
Length = 753
Score = 85.5 bits (210), Expect = 3e-16
Identities = 42/82 (51%), Positives = 56/82 (68%)
Query: 14 NKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGKT 73
N I+DE Y++ LT+ + L M+T EQ+ ++D+IMD D GG FF+YG+GGTGKT
Sbjct: 497 NHFILDERKYDRAYLTEKHEEWLTMVTLEQKKIYDEIMDVVLHDRGGVFFVYGFGGTGKT 556
Query: 74 FIWKTSLAVVRSKGLIVLNAAS 95
F+WK A +RSKG I LN AS
Sbjct: 557 FLWKLLSAAIRSKGDISLNVAS 578
>gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353667|pir||F84517
probable helicase [imported] - Arabidopsis thaliana
Length = 1265
Score = 84.7 bits (208), Expect = 5e-16
Identities = 47/95 (49%), Positives = 65/95 (67%), Gaps = 2/95 (2%)
Query: 2 PRPNTIDMPTFTNKLIVDELNYNKDE-LTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
P+P TID +N+LIV+EL YN++ L + + MLT EQR V+++I ++ + GG
Sbjct: 765 PKP-TIDGIDNSNRLIVEELRYNRESNLKEKHEEWKQMLTPEQRGVYNEITEAVFNNLGG 823
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YG+GGTGKTFIWKT A +R + IVLN AS
Sbjct: 824 VFFVYGFGGTGKTFIWKTLSATIRYRDQIVLNVAS 858
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 83.6 bits (205), Expect = 1e-15
Identities = 41/95 (43%), Positives = 59/95 (61%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
MP P + P N LI DEL Y++ + + LT EQR ++D+I+++ + GG
Sbjct: 789 MPYPENNNFPAAMNTLIQDELCYDRHACAQDHLRLFSKLTVEQRKIYDQIIEAVYSNSGG 848
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+ G+GGTGKT++WKT +RS+G IVLN AS
Sbjct: 849 VFFVNGFGGTGKTYLWKTLSTYIRSRGEIVLNVAS 883
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 83.6 bits (205), Expect = 1e-15
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
MP+P T + +N+ I +E NYN ++L + D +T EQ+ ++D+I+ + + GG
Sbjct: 581 MPKP-TKEGTDHSNRFITEEKNYNIEKLREDHDDWFNKMTSEQKGIYDEIIKAVLENSGG 639
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YG+GGT KTF+WKT A VR +GLI +N AS
Sbjct: 640 IFFVYGFGGTSKTFMWKTLSAAVRMRGLISVNVAS 674
>ref|NP_912900.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1270
Score = 77.8 bits (190), Expect = 6e-14
Identities = 39/95 (41%), Positives = 56/95 (58%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
+P P N+L++DE Y+ ++++ D L L QR ++D I++S D G
Sbjct: 753 LPEPTIQSTSILGNRLLIDEQAYDLEKISIEAADQLGKLNLNQRHIYDAILNSLNSDIGH 812
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YGYGGTGKTF+W T L VR++G I L AS
Sbjct: 813 TFFIYGYGGTGKTFLWNTLLNSVRAEGKIALAVAS 847
>dbj|BAB11364.1| helicase [Arabidopsis thaliana]
Length = 1523
Score = 77.8 bits (190), Expect = 6e-14
Identities = 39/83 (46%), Positives = 55/83 (65%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI+DE Y++D LT+ + MLT EQ+ ++D I+ + + G F+YG+GGTGK
Sbjct: 1043 TNVLILDEKGYDRDNLTEKHAKWIKMLTPEQKSIYDDIIGAVNENVGVVVFVYGFGGTGK 1102
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+ KT +RSKG IVLN +S
Sbjct: 1103 TFLSKTLSVALRSKGDIVLNVSS 1125
>gb|AAQ56555.1| hypothetical protein OSJNBa0070J19.12 [Oryza sativa (japonica
cultivar-group)]
Length = 858
Score = 74.7 bits (182), Expect = 5e-13
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
+P P N+L++DE Y+ ++++ D L L QR ++D I++S D G
Sbjct: 551 LPEPTIQSTSILGNRLLIDEQAYDLEKISIEAADQLGKLNLNQRHIYDAILNSLNSDIGH 610
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YGYGGTGKTF+W T L VR++ I L AS
Sbjct: 611 TFFIYGYGGTGKTFLWNTLLNSVRAERKIALAVAS 645
>ref|XP_550305.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|55296801|dbj|BAD68127.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1427
Score = 73.9 bits (180), Expect = 9e-13
Identities = 37/83 (44%), Positives = 53/83 (63%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI DELNYN ++L + + L L D+Q+ I++S + FFF+ G+GGTGK
Sbjct: 910 TNTLIQDELNYNANDLEEQANKLYLQLNDDQKKAFHLIVNSVINKESNFFFVSGHGGTGK 969
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+W T ++ +R+K IVL AS
Sbjct: 970 TFLWNTIVSFLRAKKEIVLTVAS 992
>ref|XP_470551.1| Putative helicase [Oryza sativa (japonica cultivar-group)]
gi|24960752|gb|AAN65446.1| Putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 764
Score = 73.9 bits (180), Expect = 9e-13
Identities = 37/83 (44%), Positives = 53/83 (63%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI DELNYN ++L + + L L D+Q+ I++S + FFF+ G+GGTGK
Sbjct: 61 TNTLIQDELNYNANDLEEQANKLYLQLNDDQKKAFHLIVNSVINKESNFFFVSGHGGTGK 120
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+W T ++ +R+K IVL AS
Sbjct: 121 TFLWNTIVSFLRAKKEIVLTVAS 143
>emb|CAE03875.2| OSJNBb0015N08.3 [Oryza sativa (japonica cultivar-group)]
gi|50928527|ref|XP_473791.1| OSJNBb0015N08.3 [Oryza
sativa (japonica cultivar-group)]
Length = 696
Score = 73.9 bits (180), Expect = 9e-13
Identities = 37/83 (44%), Positives = 53/83 (63%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI DELNYN ++L + + L L D+Q+ I++S + FFF+ G+GGTGK
Sbjct: 61 TNTLIQDELNYNANDLEEQANKLYLQLNDDQKKAFHLIVNSVINKESNFFFVSGHGGTGK 120
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+W T ++ +R+K IVL AS
Sbjct: 121 TFLWNTIVSFLRAKKEIVLTVAS 143
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.140 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,348,131
Number of Sequences: 2540612
Number of extensions: 7593077
Number of successful extensions: 19584
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 19491
Number of HSP's gapped (non-prelim): 104
length of query: 109
length of database: 863,360,394
effective HSP length: 85
effective length of query: 24
effective length of database: 647,408,374
effective search space: 15537800976
effective search space used: 15537800976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC140721.12