BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140549.8 - phase: 0
(122 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 151 3e-36
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 151 3e-36
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 148 3e-35
gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Ar... 147 8e-35
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 147 8e-35
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 144 6e-34
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 143 8e-34
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 143 8e-34
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 142 1e-33
dbj|BAB10788.1| replication protein A1-like [Arabidopsis thalian... 139 2e-32
ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana] 139 2e-32
emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar... 137 8e-32
gb|AAD32757.1| putative helicase [Arabidopsis thaliana] gi|25353... 136 1e-31
ref|NP_912900.1| unnamed protein product [Oryza sativa (japonica... 132 1e-30
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 131 3e-30
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 131 3e-30
gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353... 129 1e-29
ref|XP_483385.1| helicase-like protein [Oryza sativa (japonica c... 129 1e-29
ref|NP_680269.1| hypothetical protein [Arabidopsis thaliana] 129 1e-29
gb|AAF06079.1| F28J9.3 [Arabidopsis thaliana] gi|25403499|pir||F... 126 1e-28
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 151 bits (382), Expect = 3e-36
Identities = 69/117 (58%), Positives = 94/117 (79%)
Query: 6 GTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSL 65
G ++GR+++G+ + + V IPR+ LTPSD R+PFK KRRQFP+SV+FAM INKSQGQSL
Sbjct: 1553 GDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSL 1612
Query: 66 EHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+VG+YLP P+FSHGQLYVA+S+V S+GGLK+LI D + +NVV++E+FRN+
Sbjct: 1613 GNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVVFKEIFRNL 1669
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 151 bits (382), Expect = 3e-36
Identities = 69/117 (58%), Positives = 94/117 (79%)
Query: 6 GTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSL 65
G ++GR+++G+ + + V IPR+ LTPSD R+PFK KRRQFP+SV+FAM INKSQGQSL
Sbjct: 1357 GDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSL 1416
Query: 66 EHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+VG+YLP P+FSHGQLYVA+S+V S+GGLK+LI D + +NVV++E+FRN+
Sbjct: 1417 GNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVVFKEIFRNL 1473
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 148 bits (374), Expect = 3e-35
Identities = 71/121 (58%), Positives = 94/121 (77%)
Query: 2 VEEGGTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQ 61
V + G +E +V++GSN KV++PRL LTP+D RIPF+F+RRQFP+ F M INKSQ
Sbjct: 1181 VTQLGDRVIEAKVLTGSNAGNKVYLPRLVLTPADFRIPFRFQRRQFPVVPCFGMTINKSQ 1240
Query: 62 GQSLEHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRN 121
GQSL HVG+YLP P+FSHGQLYVA+S+V SR GLKILI D++ + +NVV++EVF+N
Sbjct: 1241 GQSLSHVGIYLPRPVFSHGQLYVAVSRVKSRRGLKILIIDEEGNRGKTTTNVVFKEVFQN 1300
Query: 122 V 122
+
Sbjct: 1301 L 1301
>gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Arabidopsis
thaliana]
Length = 729
Score = 147 bits (370), Expect = 8e-35
Identities = 70/116 (60%), Positives = 92/116 (78%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T +E +VI+G I V IP ++LTP+D ++PFK +RRQFP+SV+FAM INKSQGQSLE
Sbjct: 613 TQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLE 672
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
H+G+YLP P+FSHGQLYVA+S+VTS+ GLKILI D D +NVV++EVF+N+
Sbjct: 673 HIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVVFKEVFQNI 728
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 147 bits (370), Expect = 8e-35
Identities = 70/116 (60%), Positives = 92/116 (78%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T +E +VI+G I V IP ++LTP+D ++PFK +RRQFP+SV+FAM INKSQGQSLE
Sbjct: 1562 TQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLE 1621
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
H+G+YLP P+FSHGQLYVA+S+VTS+ GLKILI D D +NVV++EVF+N+
Sbjct: 1622 HIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVVFKEVFQNI 1677
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 144 bits (362), Expect = 6e-34
Identities = 66/121 (54%), Positives = 94/121 (77%)
Query: 2 VEEGGTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQ 61
V + G + LE RVI+G + +KV I + ++PSD ++PF+ +RRQFPI+V+FAM INKSQ
Sbjct: 977 VTQMGNHILEARVITGDRVGDKVIIIKSQISPSDTKLPFRMRRRQFPIAVAFAMTINKSQ 1036
Query: 62 GQSLEHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRN 121
GQSL+ VG+YLP P+FSHGQLYVA+S+VTS+ GLK+LI D + + NVV++E+F+N
Sbjct: 1037 GQSLKEVGIYLPKPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVFKEIFQN 1096
Query: 122 V 122
+
Sbjct: 1097 I 1097
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 143 bits (361), Expect = 8e-34
Identities = 67/113 (59%), Positives = 91/113 (80%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
+E +VI+G I + V+IP +++TPSD ++PFK +RRQFP+SV+F M INKSQGQSLE VG
Sbjct: 1316 VEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQGQSLEQVG 1375
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+YLP P+FSHGQLYVA+S+VTS+ GLKILI D + +NVV++EVF+N+
Sbjct: 1376 LYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVVFKEVFQNI 1428
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 143 bits (361), Expect = 8e-34
Identities = 67/113 (59%), Positives = 91/113 (80%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
+E +VI+G I + V+IP +++TPSD ++PFK +RRQFP+SV+F M INKSQGQSLE VG
Sbjct: 1307 VEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQGQSLEQVG 1366
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+YLP P+FSHGQLYVA+S+VTS+ GLKILI D + +NVV++EVF+N+
Sbjct: 1367 LYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVVFKEVFQNI 1419
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 142 bits (359), Expect = 1e-33
Identities = 68/113 (60%), Positives = 91/113 (80%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
++ +VI+ I + V IP ++LTPSD ++PFK +RRQFP+SV+FAM INKSQGQSLE VG
Sbjct: 1639 VQAKVITRDRIGDIVLIPLINLTPSDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEQVG 1698
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+YLP P+FSHGQLYVA+S+VTS+ GLKILI D D + +NVV++EVF+N+
Sbjct: 1699 LYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGNMQKQTTNVVFKEVFQNI 1751
>dbj|BAB10788.1| replication protein A1-like [Arabidopsis thaliana]
gi|3695387|gb|AAC62789.1| contains similarity to
replication protein A1 [Arabidopsis thaliana]
gi|7487549|pir||T01955 hypothetical protein T2L5.8 -
Arabidopsis thaliana
Length = 1073
Score = 139 bits (350), Expect = 2e-32
Identities = 68/116 (58%), Positives = 89/116 (76%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T +E +VI+G I V IP ++LTP+D ++PFK +RRQFP+SV+FAM IN SQGQSLE
Sbjct: 957 TQIVEAKVITGDIIGHIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINTSQGQSLE 1016
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
HVG+YLP +FSHGQLYVA+S+VTS+ GLK LI D D +NVV++EVF+N+
Sbjct: 1017 HVGLYLPKAVFSHGQLYVALSRVTSKKGLKFLILDKDGKLQKQTTNVVFKEVFQNI 1072
>ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana]
Length = 1033
Score = 139 bits (350), Expect = 2e-32
Identities = 68/116 (58%), Positives = 89/116 (76%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T +E +VI+G I V IP ++LTP+D ++PFK +RRQFP+SV+FAM IN SQGQSLE
Sbjct: 917 TQIVEAKVITGDIIGHIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINTSQGQSLE 976
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
HVG+YLP +FSHGQLYVA+S+VTS+ GLK LI D D +NVV++EVF+N+
Sbjct: 977 HVGLYLPKAVFSHGQLYVALSRVTSKKGLKFLILDKDGKLQKQTTNVVFKEVFQNI 1032
>emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar-group)]
Length = 2052
Score = 137 bits (344), Expect = 8e-32
Identities = 64/117 (54%), Positives = 87/117 (73%)
Query: 6 GTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSL 65
G + L+ +++GS I E VF+PR+SL ++++ PF +RRQFP+ V +AM INKSQGQ+L
Sbjct: 1302 GEWVLQRTILTGSKIGEIVFVPRISLNTTNSKWPFTLQRRQFPVRVCYAMTINKSQGQTL 1361
Query: 66 EHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
HVGVYL P+F+HGQLYV IS+ TSR GLKILI DD++ SNVVY E+ R++
Sbjct: 1362 SHVGVYLKKPVFTHGQLYVVISRATSRSGLKILIEDDNESCASETSNVVYHEILRSL 1418
>gb|AAD32757.1| putative helicase [Arabidopsis thaliana] gi|25353663|pir||H84486
probable helicase [imported] - Arabidopsis thaliana
Length = 1241
Score = 136 bits (343), Expect = 1e-31
Identities = 64/121 (52%), Positives = 92/121 (75%)
Query: 2 VEEGGTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQ 61
V + G + LE RVI+G + +KV I + ++PSD ++PF+ +RRQFPI+V+FAM I KSQ
Sbjct: 1119 VTQMGNHILEARVITGDRVRDKVIIIKAQISPSDTKLPFRMRRRQFPIAVAFAMRIKKSQ 1178
Query: 62 GQSLEHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRN 121
GQSL+ V +YLP P+FSHGQLYVA+S+VTS+ GLK+LI D + + NVV++E+F+N
Sbjct: 1179 GQSLKEVEIYLPRPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVFKEIFQN 1238
Query: 122 V 122
+
Sbjct: 1239 L 1239
>ref|NP_912900.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1270
Score = 132 bits (333), Expect = 1e-30
Identities = 62/113 (54%), Positives = 83/113 (72%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
+EG +I+G K +IPR+ T D + PFK KRRQFP+ VS+A+ INKSQGQ+L VG
Sbjct: 1151 IEGEIITGKAKGSKAYIPRIVTTSIDKKWPFKLKRRQFPVCVSYALTINKSQGQTLSRVG 1210
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
VYLPSP+FSHGQLYVA+S+VTS GL+ILI + + + NVVY+E+F ++
Sbjct: 1211 VYLPSPVFSHGQLYVALSRVTSPDGLRILIENSPTEHVTSTHNVVYKEIFNDL 1263
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 131 bits (330), Expect = 3e-30
Identities = 58/110 (52%), Positives = 87/110 (78%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
+E ++I+G+++ EKV+IPR+ +TP+++ PF KRRQ+P+SV FAM INKSQGQSL VG
Sbjct: 1525 IEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINKSQGQSLNMVG 1584
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVF 119
+YLP +F+HGQLYVA S+VT R GL+I+++D++ + N+VY+E+F
Sbjct: 1585 LYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNIVYKEIF 1634
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 131 bits (330), Expect = 3e-30
Identities = 58/110 (52%), Positives = 87/110 (78%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
+E ++I+G+++ EKV+IPR+ +TP+++ PF KRRQ+P+SV FAM INKSQGQSL VG
Sbjct: 1416 IEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTINKSQGQSLNMVG 1475
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVF 119
+YLP +F+HGQLYVA S+VT R GL+I+++D++ + N+VY+E+F
Sbjct: 1476 LYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDDNESPGEHMVRNIVYKEIF 1525
>gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353667|pir||F84517
probable helicase [imported] - Arabidopsis thaliana
Length = 1265
Score = 129 bits (325), Expect = 1e-29
Identities = 60/97 (61%), Positives = 79/97 (80%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T +E +VI+G I + IP ++LTP++ ++PFK +RRQFP+SV+F M INKS+GQSLE
Sbjct: 1166 TQIVEAKVITGDRIGHIILIPTVNLTPTNTKLPFKMRRRQFPLSVAFVMTINKSEGQSLE 1225
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDD 103
HVG+YLP P+FSHGQLYVA+S+VTS+ GLKILI D D
Sbjct: 1226 HVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKD 1262
>ref|XP_483385.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|27817864|dbj|BAC55632.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|42409190|dbj|BAD10456.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1330
Score = 129 bits (325), Expect = 1e-29
Identities = 61/110 (55%), Positives = 81/110 (73%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
+EG +++G K +IPR+ T + ++ PFK KRRQFPI +S+AM INKSQGQ+L+ VG
Sbjct: 1213 IEGEIMTGKAKGSKAYIPRIITTSAQSKWPFKLKRRQFPIRLSYAMTINKSQGQTLQKVG 1272
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVF 119
YLPSP+FSHGQLYVA+S+VTS GL+ILIN + + NVVY E+F
Sbjct: 1273 AYLPSPVFSHGQLYVALSRVTSPKGLRILINSNSSSNEHCTQNVVYHEIF 1322
>ref|NP_680269.1| hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 129 bits (325), Expect = 1e-29
Identities = 65/109 (59%), Positives = 84/109 (76%)
Query: 13 RVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVGVYL 72
RVI+G I E V IP ++LTPSD ++PFK +RRQF +SV+FA+ INKSQGQSLE VG+YL
Sbjct: 220 RVITGDRIGEIVLIPLINLTPSDMKLPFKMRRRQFSLSVAFAITINKSQGQSLEQVGLYL 279
Query: 73 PSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRN 121
P P+FS GQLYVA+S+VTS+ GLKILI D D + +N+V+ EV +
Sbjct: 280 PKPVFSLGQLYVALSRVTSKKGLKILILDKDGNIQKQTTNIVFYEVLHS 328
>gb|AAF06079.1| F28J9.3 [Arabidopsis thaliana] gi|25403499|pir||F86486 protein
F28J9.3 [imported] - Arabidopsis thaliana
Length = 436
Score = 126 bits (316), Expect = 1e-28
Identities = 63/113 (55%), Positives = 85/113 (74%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
++ RVI G I E V I ++LTPSD ++PFK +RRQF + V+FAM INKSQGQSL+ VG
Sbjct: 323 VQARVIIGDTIGEIVLIRTMNLTPSDTKLPFKMRRRQFLLPVAFAMTINKSQGQSLQQVG 382
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+YL P+FSHGQLYVA+S+VT++ GLKILI D +NVV+++VF+N+
Sbjct: 383 LYLHKPVFSHGQLYVALSRVTAKKGLKILILDKYGKLHKQTTNVVFKKVFQNI 435
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.140 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,351,171
Number of Sequences: 2540612
Number of extensions: 7669491
Number of successful extensions: 21357
Number of sequences better than 10.0: 280
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 21087
Number of HSP's gapped (non-prelim): 287
length of query: 122
length of database: 863,360,394
effective HSP length: 98
effective length of query: 24
effective length of database: 614,380,418
effective search space: 14745130032
effective search space used: 14745130032
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC140549.8