BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140025.11 + phase: 0
(217 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM67422.1| AT5g15260/F8M21_150 [Arabidopsis thaliana] gi|180... 207 1e-52
gb|AAS76274.1| At3g01170 [Arabidopsis thaliana] gi|18395728|ref|... 202 4e-51
emb|CAB89336.1| putative protein [Arabidopsis thaliana] gi|11288... 197 2e-49
gb|AAF26157.1| unknown protein [Arabidopsis thaliana] 174 2e-42
dbj|BAD82699.1| pentatricopeptide (PPR) repeat-containing protei... 146 5e-34
gb|AAT77282.1| unknown protein [Oryza sativa (japonica cultivar-... 142 7e-33
gb|AAF30311.1| unknown protein [Arabidopsis thaliana] gi|1523065... 116 4e-25
ref|NP_197403.1| pentatricopeptide (PPR) repeat-containing prote... 114 2e-24
gb|AAV31269.1| hypothetical protein [Oryza sativa (japonica cult... 84 4e-15
emb|CAB79714.1| hypothetical protein [Arabidopsis thaliana] gi|5... 36 0.66
emb|CAD65031.1| tyrosine--tRNA ligase [Lactobacillus plantarum W... 35 1.1
pir||A23667 47K peroxisomal membrane protein - yeast (Candida bo... 34 2.5
gb|AAV95274.1| membrane protein, putative [Silicibacter pomeroyi... 33 4.3
emb|CAH03357.1| DHHC-type Zn-finger containing protein, putative... 33 5.6
ref|XP_426659.1| PREDICTED: similar to doublesex-mab-3 (DM) doma... 33 5.6
ref|ZP_00512525.1| Sec-independent periplasmic protein transloca... 33 7.3
emb|CAA89147.1| unknown [Saccharomyces cerevisiae] gi|6323675|re... 32 9.5
ref|XP_518772.1| PREDICTED: similar to G protein-coupled recepto... 32 9.5
emb|CAE45986.1| hypothetical protein [Homo sapiens] gi|50400481|... 32 9.5
emb|CAE45930.1| hypothetical protein [Homo sapiens] 32 9.5
>gb|AAM67422.1| AT5g15260/F8M21_150 [Arabidopsis thaliana]
gi|18086573|gb|AAL57710.1| AT5g15260/F8M21_150
[Arabidopsis thaliana] gi|22326823|ref|NP_197030.2|
expressed protein [Arabidopsis thaliana]
Length = 234
Score = 207 bits (528), Expect = 1e-52
Identities = 125/238 (52%), Positives = 155/238 (64%), Gaps = 25/238 (10%)
Query: 1 MVNFHSLISSVDQSSSSMANSIDL--------AKSRNRKTLNSLQIPQ----CERSRSAV 48
MV F + IS VDQS MA+S D S NRK+ +S C+ SRSA
Sbjct: 1 MVYFQNSISLVDQSPI-MAHSPDFHHHSKQSRTSSSNRKSSSSSCSSNFSVCCDGSRSAA 59
Query: 49 VDVVIFIAVVIALGFLVFPYIQFVMSESFKLCGLFMDLVKEEVA--VAPVIYVSLGVSVS 106
+DVVI IAV+ + GFL+FPYI+F+ +S ++ LVKEE+ P++Y + +S+S
Sbjct: 60 IDVVILIAVITSSGFLIFPYIKFITIKSVEIFSELSCLVKEEILRNPDPIVYGLIALSIS 119
Query: 107 CAVVATWFFIAY--TSRKCSNPNCKGLKNA-AEFDIQLETEDCVKNSPSLGKDGGGIKKG 163
C ++ W + + +C PNCKGL+ A AEFDIQLETEDCVK+S S GK KKG
Sbjct: 120 CTALSAWMIVILLCSRHRCGKPNCKGLRKANAEFDIQLETEDCVKSSNS-GKSVS--KKG 176
Query: 164 LFKIPCDHHRELEAELKKMAPVNGRAVLVLRGKCGCSVGRLEVPGPKK----NRKIKK 217
LF++P DHHRELEAELKKMAP NGRAVLV R KCGCSVGRLEVPGPKK RK+KK
Sbjct: 177 LFELPRDHHRELEAELKKMAPPNGRAVLVFRAKCGCSVGRLEVPGPKKQQLQQRKVKK 234
>gb|AAS76274.1| At3g01170 [Arabidopsis thaliana] gi|18395728|ref|NP_566133.1|
expressed protein [Arabidopsis thaliana]
gi|51968648|dbj|BAD43016.1| unknown protein [Arabidopsis
thaliana]
Length = 215
Score = 202 bits (515), Expect = 4e-51
Identities = 114/224 (50%), Positives = 146/224 (64%), Gaps = 16/224 (7%)
Query: 1 MVNFHSLISSVDQSSSSMANSIDLAKSRNRKTLNSL-----QIPQCERSRSAVVDVVIFI 55
MV HS IS V S M S KSRN + +S + P C+ S+SA +DVVI I
Sbjct: 1 MVYLHSSIS-VCNSVDPMIMSHSSPKSRNTRNKSSSSPTCSKFPVCDGSQSAAIDVVILI 59
Query: 56 AVVIALGFLVFPYIQFVMSESFKLCGLFMDLVKEEVAVAPVIYVSLGVSVSCAVVATWFF 115
AV+ A GFL FPY++ + +S ++ LVK+E+ P++Y SL +S+ CA ++TW
Sbjct: 60 AVITACGFLFFPYVKLITLKSIEVFSDLSLLVKQEILQNPIVYGSLALSIFCAAISTWLV 119
Query: 116 IAY-TSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPCDHHRE 174
I T ++C PNCKGL+ A EFDIQLETE+CVK+S + K+G+F++P HHRE
Sbjct: 120 ILLCTMQRCGKPNCKGLRKAVEFDIQLETEECVKSSSN--------KRGMFELPRVHHRE 171
Query: 175 LEAELKKMAPVNGRAVLVLRGKCGCSVGRLEVPGPKK-NRKIKK 217
LEAELKKMAP NGRAVLV R +CGCSV RL V GPKK RKIKK
Sbjct: 172 LEAELKKMAPPNGRAVLVFRARCGCSVRRLVVSGPKKQQRKIKK 215
>emb|CAB89336.1| putative protein [Arabidopsis thaliana] gi|11288897|pir||T49961
hypothetical protein F8M21.150 - Arabidopsis thaliana
Length = 294
Score = 197 bits (501), Expect = 2e-49
Identities = 103/178 (57%), Positives = 129/178 (71%), Gaps = 8/178 (4%)
Query: 41 CERSRSAVVDVVIFIAVVIALGFLVFPYIQFVMSESFKLCGLFMDLVKEEVA--VAPVIY 98
C+ SRSA +DVVI IAV+ + GFL+FPYI+F+ +S ++ LVKEE+ P++Y
Sbjct: 36 CDGSRSAAIDVVILIAVITSSGFLIFPYIKFITIKSVEIFSELSCLVKEEILRNPDPIVY 95
Query: 99 VSLGVSVSCAVVATWFFIAY--TSRKCSNPNCKGLKNA-AEFDIQLETEDCVKNSPSLGK 155
+ +S+SC ++ W + + +C PNCKGL+ A AEFDIQLETEDCVK+S S GK
Sbjct: 96 GLIALSISCTALSAWMIVILLCSRHRCGKPNCKGLRKANAEFDIQLETEDCVKSSNS-GK 154
Query: 156 DGGGIKKGLFKIPCDHHRELEAELKKMAPVNGRAVLVLRGKCGCSVGRLEVPGPKKNR 213
KKGLF++P DHHRELEAELKKMAP NGRAVLV R KCGCSVGRLEVPGPKK +
Sbjct: 155 SVS--KKGLFELPRDHHRELEAELKKMAPPNGRAVLVFRAKCGCSVGRLEVPGPKKQQ 210
>gb|AAF26157.1| unknown protein [Arabidopsis thaliana]
Length = 596
Score = 174 bits (440), Expect = 2e-42
Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 15/202 (7%)
Query: 1 MVNFHSLISSVDQSSSSMANSIDLAKSRNRKTLNSL-----QIPQCERSRSAVVDVVIFI 55
MV HS IS V S M S KSRN + +S + P C+ S+SA +DVVI I
Sbjct: 1 MVYLHSSIS-VCNSVDPMIMSHSSPKSRNTRNKSSSSPTCSKFPVCDGSQSAAIDVVILI 59
Query: 56 AVVIALGFLVFPYIQFVMSESFKLCGLFMDLVKEEVAVAPVIYVSLGVSVSCAVVATWFF 115
AV+ A GFL FPY++ + +S ++ LVK+E+ P++Y SL +S+ CA ++TW
Sbjct: 60 AVITACGFLFFPYVKLITLKSIEVFSDLSLLVKQEILQNPIVYGSLALSIFCAAISTWLV 119
Query: 116 IAY-TSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPCDHHRE 174
I T ++C PNCKGL+ A EFDIQLETE+CVK+S + K+G+F++P HHRE
Sbjct: 120 ILLCTMQRCGKPNCKGLRKAVEFDIQLETEECVKSSSN--------KRGMFELPRVHHRE 171
Query: 175 LEAELKKMAPVNGRAVLVLRGK 196
LEAELKKMAP NGRAVLV R +
Sbjct: 172 LEAELKKMAPPNGRAVLVFRAR 193
>dbj|BAD82699.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa (japonica cultivar-group)]
Length = 218
Score = 146 bits (368), Expect = 5e-34
Identities = 88/206 (42%), Positives = 118/206 (56%), Gaps = 10/206 (4%)
Query: 14 SSSSMANSIDLAKSRNRKTLNSLQIPQCERSRSAVVDVVIFIAVVIALGFLVFPYIQFVM 73
+ S+ A + SR+R+ +SL C+ S A VD V+ +AVV ALGFLV PY + +
Sbjct: 21 ADSAAAAGCSSSSSRSRRGGSSLTA-LCDHSPMAAVDAVVLLAVVAALGFLVVPYAKMAL 79
Query: 74 SESFKLCGLFMDLVKEEVAVAPVIYVSLGVSVSCAVVATWFFIAYTSRKCSNPNCKGLKN 133
E L L ++ + V+V+ AV+A W + + +RKC P C+GLK
Sbjct: 80 LEMGAL------LHPAASCLSAAAFAGAAVAVAAAVLA-WELVGHHARKCGKPRCRGLKK 132
Query: 134 AAEFDIQLETEDCVKNSPSLGKDGGGIKK-GLFKIPC-DHHRELEAELKKMAPVNGRAVL 191
A EFDIQLETE+CV+ P+ + G + D HRELEAEL+KMAP NGR VL
Sbjct: 133 AVEFDIQLETEECVRGHPAPAARSALLAAAGAHPVELGDAHRELEAELRKMAPPNGRTVL 192
Query: 192 VLRGKCGCSVGRLEVPGPKKNRKIKK 217
+ R CGC GR+EV G KK R+IKK
Sbjct: 193 IFRSPCGCPKGRMEVWGAKKVRRIKK 218
>gb|AAT77282.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 241
Score = 142 bits (358), Expect = 7e-33
Identities = 90/224 (40%), Positives = 118/224 (52%), Gaps = 14/224 (6%)
Query: 5 HSLISSVDQSSSSMANSIDLAKSRNRKTLNSLQIPQCERSRSAVVDVVIFIAVVIALGFL 64
H+ +S D ++ A + S R+ L C+ S A VD V +AVV AL FL
Sbjct: 21 HAAAASTDSAACGTAPARPRRGSSPRRGRRRLFTSLCDHSAMAAVDAVALLAVVSALAFL 80
Query: 65 VFPYIQFVMSESFKLCGLFMDLVKEEVA---VAPVIYVSLGVSVSC-AVVATWFFIAYTS 120
V PY++ V +E + GL DL VA AP G +++ A V W + + +
Sbjct: 81 VTPYVRMVAAE---VGGLVSDLDAAGVASSYYAPFAAAGAGAAIAAVAGVVAWDAVGHRA 137
Query: 121 RKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPC-------DHHR 173
R+C P C+GL+ A EFDIQLETE+CV+ G + L D HR
Sbjct: 138 RRCGKPRCRGLRKAVEFDIQLETEECVRGQQQRLLPLPGGRAALLAAAGARPVQLGDAHR 197
Query: 174 ELEAELKKMAPVNGRAVLVLRGKCGCSVGRLEVPGPKKNRKIKK 217
ELEAEL+KMAP NGR VL+ R CGC GR+EV G KK R+IKK
Sbjct: 198 ELEAELRKMAPPNGRTVLIFRSPCGCPKGRMEVWGAKKVRRIKK 241
>gb|AAF30311.1| unknown protein [Arabidopsis thaliana] gi|15230653|ref|NP_187269.1|
expressed protein [Arabidopsis thaliana]
gi|62867643|gb|AAY17425.1| At3g06180 [Arabidopsis
thaliana]
Length = 241
Score = 116 bits (291), Expect = 4e-25
Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 13/221 (5%)
Query: 5 HSLISSVDQSSSSMANSIDLAKSRNRKTLNSLQIPQCERSRSAVVDVVIFIAVVIALGFL 64
HS +S+ SSS+ ++ + + S + + +SL + C+ S SA +D++I I V+ + FL
Sbjct: 12 HSTTNSMPPSSSASRSASNHSSSSSSSS-SSLHL--CKHSPSATLDLLILILVLFSGAFL 68
Query: 65 VFPYIQFV------MSESF-KLCGLFMDLVKEEVAVAPVIYV-SLGVSVSCAVVATWFFI 116
+ Y ++ +S F L L ++ ++ P Y + V + ++
Sbjct: 69 LSSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCC 128
Query: 117 AYTSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPCDHHRELE 176
SRKC NP CKGLK A EFD+QL+TE+CVK+ + D K G P + L
Sbjct: 129 GPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNP--DYECLR 186
Query: 177 AELKKMAPVNGRAVLVLRGKCGCSVGRLEVPGPKKNRKIKK 217
AEL++MAP NGRAVL+ R +CGC V +LE GPK+ R+ KK
Sbjct: 187 AELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKK 227
>ref|NP_197403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 939
Score = 114 bits (284), Expect = 2e-24
Identities = 83/240 (34%), Positives = 124/240 (51%), Gaps = 34/240 (14%)
Query: 6 SLISSVDQSSSSMANSIDLAKSRNRKTLNSLQIPQCERSRSAVVDVVIFIAVVIALGFLV 65
S ++V+ +S++M S A ++N +S + C+ S SA +D++I I V+ + FL+
Sbjct: 12 STTTAVEDNSTTMPPSSRSAANQN----SSSSLHLCKHSPSATLDLLILILVLFSGTFLL 67
Query: 66 FPYIQFVMSESFKLCGLFMDLVKEEVAVAP--VIYVSLGVSVS----------CAVVATW 113
Y +++ L F + ++ P +I+ S S A++
Sbjct: 68 SSYFSYLIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASF 127
Query: 114 FF---------IAYT-------SRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDG 157
FF IA+ SRKC NP CKG+K A EFD+QL+TE+CVK+ D
Sbjct: 128 FFAFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDR 187
Query: 158 GGIKKGLFKIPCDHHRELEAELKKMAPVNGRAVLVLRGKCGCSVGRLEVPGPKKNRKIKK 217
K G P + L AEL+KMAPVNGRAVL+ R KCGC + +LE GPK++R+ KK
Sbjct: 188 LPWKGGSESNP--DYECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245
>gb|AAV31269.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 255
Score = 83.6 bits (205), Expect = 4e-15
Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 46 SAVVDVVIFIAVVIALGFLVFPYIQFVMSESFKLCGLFMDLVKEEVAVAPVIYVSLGVSV 105
SA +D++I + V+ ++ FL+ + V L L +A A LG +
Sbjct: 68 SATLDLLILLLVLFSVAFLLASSLAHVSRSLTPL--LASPPAAAALASAAAAMPYLGAAA 125
Query: 106 SCAVVATWFFIAYTSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLF 165
+ A R+C NP C+GL A EFD+QL+TE+ V+ G GG ++
Sbjct: 126 ALAGATFLSCSRLPRRRCRNPRCRGLVKALEFDVQLQTEEAVR--AGTGSTSGGADAAMW 183
Query: 166 K----IPCD--------HHRELEAELKKMAPVNGRAVLVLRGKCGCSVGRLEVPG-PKKN 212
+ +P + L AEL++MAP NGRAVL+ R +CGC + +LE G PK
Sbjct: 184 REIEALPWKGGQGGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGCPIAKLEGWGVPKSK 243
Query: 213 RKIK 216
R+ K
Sbjct: 244 RRSK 247
>emb|CAB79714.1| hypothetical protein [Arabidopsis thaliana]
gi|5123550|emb|CAB45316.1| hypothetical protein
[Arabidopsis thaliana] gi|23297599|gb|AAN12988.1|
unknown protein [Arabidopsis thaliana]
gi|15233616|ref|NP_194685.1| expressed protein
[Arabidopsis thaliana] gi|7452460|pir||T09919
hypothetical protein T16L4.70 - Arabidopsis thaliana
Length = 493
Score = 36.2 bits (82), Expect = 0.66
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 11 VDQSSSSMANSIDLAKSRNRKTLNSLQIPQCERSRSAVVDVVIFIAVV------IALGFL 64
+DQ+S+ ++S A NR + SL QC+++ S V V+FI + L FL
Sbjct: 25 LDQASNLFSSSSSAAAPINRSSFVSLLKKQCDQNSSPVTKKVLFIETLPNMVQSKILSFL 84
Query: 65 VFPYIQFVMSE 75
+F Y +F +S+
Sbjct: 85 LFEYQRFCVSD 95
>emb|CAD65031.1| tyrosine--tRNA ligase [Lactobacillus plantarum WCFS1]
gi|28379288|ref|NP_786180.1| tyrosine--tRNA ligase
[Lactobacillus plantarum WCFS1]
Length = 418
Score = 35.4 bits (80), Expect = 1.1
Identities = 23/75 (30%), Positives = 34/75 (44%), Gaps = 7/75 (9%)
Query: 129 KGLKNAAEFDIQLETE-------DCVKNSPSLGKDGGGIKKGLFKIPCDHHRELEAELKK 181
+G K D+ E + D K PS + IK G +I + ++EAE+
Sbjct: 335 QGFKGVPSADVSAEKQNIVLWLVDATKFEPSRRQAREDIKNGAIRINGEKVTDVEAEIDP 394
Query: 182 MAPVNGRAVLVLRGK 196
A NG+ V+V RGK
Sbjct: 395 SAAFNGKFVIVRRGK 409
>pir||A23667 47K peroxisomal membrane protein - yeast (Candida boidinii)
gi|130357|sp|P21245|P47A_CANBO Peroxisomal membrane
protein PMP47A gi|170903|gb|AAA63791.1| peroxisomal
membrane protein
Length = 423
Score = 34.3 bits (77), Expect = 2.5
Identities = 32/117 (27%), Positives = 55/117 (46%), Gaps = 10/117 (8%)
Query: 53 IFIAVVIALGFLVFPYIQFVMSESFKLCGLFMDLVKEEVAVAPVIYVSLGV-SVSCAVVA 111
+F +V AL ++ P IQ+ + E K F+ +K+ + PV + LG A +
Sbjct: 203 LFTGIVPALFLVLNPIIQYTIFEQLKS---FIVKIKKR-NITPVDALLLGAFGKLIATII 258
Query: 112 TWFFIAYTSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIP 168
T+ +I SR + K + +E D++ E D V++ P G D +K+ K P
Sbjct: 259 TYPYITLRSRM----HVKSMTEISE-DVEKERTDSVQSLPEDGSDEDNLKENSAKSP 310
>gb|AAV95274.1| membrane protein, putative [Silicibacter pomeroyi DSS-3]
gi|56696871|ref|YP_167233.1| membrane protein, putative
[Silicibacter pomeroyi DSS-3]
Length = 1053
Score = 33.5 bits (75), Expect = 4.3
Identities = 22/65 (33%), Positives = 36/65 (54%), Gaps = 1/65 (1%)
Query: 47 AVVDVVIFIAVVIALGFLVF-PYIQFVMSESFKLCGLFMDLVKEEVAVAPVIYVSLGVSV 105
A+V V F+A V A+GF++F ++ FV+ +F F+ LV V VA V +V L +
Sbjct: 885 ALVAFVTFVAFVAAVGFVLFVAFVAFVIFVAFVAFVAFVVLVAFVVLVALVAFVGLVAFI 944
Query: 106 SCAVV 110
+ +
Sbjct: 945 ALVAI 949
>emb|CAH03357.1| DHHC-type Zn-finger containing protein, putative [Paramecium
tetraurelia] gi|50404996|ref|YP_054088.1| DHHC-type
Zn-finger containing protein, putative [Paramecium
tetraurelia]
Length = 364
Score = 33.1 bits (74), Expect = 5.6
Identities = 27/85 (31%), Positives = 36/85 (41%), Gaps = 4/85 (4%)
Query: 38 IPQCERSRSAVVDVVIFIAVVIALGFLVFPYIQFVMSESFKLCGLF--MDLVKEEVAVAP 95
I QC R+ V ++V L F+ I +++ ES K D V E +A P
Sbjct: 173 IGQCIGRRNYVYFYFFIMSVSFMLIFVFGTCISYIVDESKKRAEFMDTSDAVSETIAHNP 232
Query: 96 V--IYVSLGVSVSCAVVATWFFIAY 118
V I V SC VV W F +Y
Sbjct: 233 VSIILVIYSFGFSCFVVGLWLFHSY 257
>ref|XP_426659.1| PREDICTED: similar to doublesex-mab-3 (DM) domain [Gallus gallus]
Length = 301
Score = 33.1 bits (74), Expect = 5.6
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 120 SRKCSNPNCKGLKNAAEFDIQLETEDCVKNSP-SLGKDGGGIKKGLFKIPCDHHRELEAE 178
+R+C N AA D+ T V SP L GG +K G + L A
Sbjct: 62 ARRCPVGNGGASPRAAGADVPRRTSRAVTASPRGLPSGGGDVKAGWLTVVNGKGAPLPAR 121
Query: 179 LKKMAPVNGRAVLVLRGKCGC 199
AP NGRA G GC
Sbjct: 122 APHRAPRNGRAT---AGSAGC 139
>ref|ZP_00512525.1| Sec-independent periplasmic protein translocase [Chlorobium
limicola DSM 245] gi|67783484|gb|EAM42872.1|
Sec-independent periplasmic protein translocase
[Chlorobium limicola DSM 245]
Length = 339
Score = 32.7 bits (73), Expect = 7.3
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 42 ERSRSAVVDVVIFIAVVIALGFLVFPYIQFVMSESFKLCGLFMDLVKEEVAVAPVIYVSL 101
E+ RSA +++FI++ G + F Y F+ G L+K +AV I +
Sbjct: 193 EKERSASRFIILFISLCFFAG-IAFGYFVFLPISLTFFAGFGSSLIKNNIAVQDYISFVM 251
Query: 102 GVSVSCAVVATWFFIAYTSRK 122
G ++ +V FI+Y K
Sbjct: 252 GTLLTTGLVFELPFISYVLSK 272
>emb|CAA89147.1| unknown [Saccharomyces cerevisiae] gi|6323675|ref|NP_013746.1| Bud
neck-localized, SH3 domain-containing protein required
for cytokinesis; regulates actomyosin ring dynamics and
septin localization; interacts with the formins, Bni1p
and Bnr1p, and with Cyk3p, Vrp1p, and Bni5p; Hof1p
[Saccharomyces cerevisiae]
gi|2497125|sp|Q05080|CYK2_YEAST Cytokinesis 2 protein
Length = 669
Score = 32.3 bits (72), Expect = 9.5
Identities = 22/48 (45%), Positives = 28/48 (57%), Gaps = 9/48 (18%)
Query: 8 ISSVDQSSSSMANSID----LAKS-----RNRKTLNSLQIPQCERSRS 46
+ S+ S SSMANSID AKS R RK+++ LQ+P SRS
Sbjct: 445 MESMTTSVSSMANSIDDSQRFAKSWNSSNRKRKSMSHLQVPSSASSRS 492
>ref|XP_518772.1| PREDICTED: similar to G protein-coupled receptor 126 beta 1;
developmentally regulated G-protein-coupled receptor
[Pan troglodytes]
Length = 1179
Score = 32.3 bits (72), Expect = 9.5
Identities = 19/78 (24%), Positives = 36/78 (45%), Gaps = 6/78 (7%)
Query: 114 FFIAYTSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPCDHHR 173
+F++ + KC N +K + + + C+ + SLG G K+ +PCD
Sbjct: 233 YFLSISDSKCLLNNALPVKEKEDIFAESFEQLCLVWNNSLGSIGVNFKRNYETVPCD--- 289
Query: 174 ELEAELKKMAPVNGRAVL 191
+ + K+ P NG+ +L
Sbjct: 290 ---STISKVIPGNGKLLL 304
>emb|CAE45986.1| hypothetical protein [Homo sapiens]
gi|50400481|sp|Q86SQ4|GP126_HUMAN Probable G-protein
coupled receptor 126 precursor
gi|37620169|ref|NP_065188.3| G protein-coupled receptor
126 [Homo sapiens]
Length = 1221
Score = 32.3 bits (72), Expect = 9.5
Identities = 19/78 (24%), Positives = 36/78 (45%), Gaps = 6/78 (7%)
Query: 114 FFIAYTSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPCDHHR 173
+F++ + KC N +K + + + C+ + SLG G K+ +PCD
Sbjct: 222 YFLSISDSKCLLNNALPVKEKEDIFAESFEQLCLVWNNSLGSIGVNFKRNYETVPCD--- 278
Query: 174 ELEAELKKMAPVNGRAVL 191
+ + K+ P NG+ +L
Sbjct: 279 ---STISKVIPGNGKLLL 293
>emb|CAE45930.1| hypothetical protein [Homo sapiens]
Length = 1198
Score = 32.3 bits (72), Expect = 9.5
Identities = 19/78 (24%), Positives = 36/78 (45%), Gaps = 6/78 (7%)
Query: 114 FFIAYTSRKCSNPNCKGLKNAAEFDIQLETEDCVKNSPSLGKDGGGIKKGLFKIPCDHHR 173
+F++ + KC N +K + + + C+ + SLG G K+ +PCD
Sbjct: 227 YFLSISDSKCLLNNALPVKEKEDIFAESFEQLCLVWNNSLGSIGVNFKRNYETVPCD--- 283
Query: 174 ELEAELKKMAPVNGRAVL 191
+ + K+ P NG+ +L
Sbjct: 284 ---STISKVIPGNGKLLL 298
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 331,976,879
Number of Sequences: 2540612
Number of extensions: 12398838
Number of successful extensions: 27623
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 27580
Number of HSP's gapped (non-prelim): 38
length of query: 217
length of database: 863,360,394
effective HSP length: 123
effective length of query: 94
effective length of database: 550,865,118
effective search space: 51781321092
effective search space used: 51781321092
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)
Medicago: description of AC140025.11