BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139854.7 + phase: 0 /pseudo
         (672 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_325866.1| ESTERASE/LIPASE 1 [Mycoplasma pulmonis UAB CTIP...    36  3.6
emb|CAG80140.1| unnamed protein product [Yarrowia lipolytica CLI...    35  6.1
pir||T13078 KIAA0992 protein - human (fragment) gi|4589628|dbj|B...    35  6.1
ref|ZP_00410542.1| similar to Uncharacterized protein conserved ...    35  7.9
ref|YP_000448.1| Ig-like repeat domain protein 3 [Leptospira int...    35  7.9

>ref|NP_325866.1| ESTERASE/LIPASE 1 [Mycoplasma pulmonis UAB CTIP]
           gi|14089448|emb|CAC13208.1| ESTERASE/LIPASE 1
           [Mycoplasma pulmonis] gi|25326341|pir||C90516
           esterase/lipase 1 [imported] - Mycoplasma pulmonis
           (strain UAB CTIP)
          Length = 268

 Score = 36.2 bits (82), Expect = 3.6
 Identities = 21/81 (25%), Positives = 39/81 (47%), Gaps = 6/81 (7%)

Query: 575 LKAIVERLKKLPFQMKLEVKEGLRQLAFPETTLMSPPPRKVPTKGAKKKFDIARSKGKIT 634
           LK +V+   +L  +  ++++E + ++  P   ++    R VPTKG+ K ++      K  
Sbjct: 185 LKVMVD--PELMNKSAIKMQEAIEKIQVPTLAIVGEDDRLVPTKGSLKSYE----NQKFV 238

Query: 635 STSRIPSSGEVVDSQNPDSQW 655
               IP SG +   +NP   W
Sbjct: 239 KIVVIPKSGHMPQVENPKEYW 259


>emb|CAG80140.1| unnamed protein product [Yarrowia lipolytica CLIB99]
           gi|50554257|ref|XP_504537.1| hypothetical protein
           [Yarrowia lipolytica]
          Length = 499

 Score = 35.4 bits (80), Expect = 6.1
 Identities = 29/102 (28%), Positives = 43/102 (41%), Gaps = 9/102 (8%)

Query: 576 KAIVERLKKLPFQMKLEVK-EGLRQLAFPETTLMSPPPRKVPTKGAKK--------KFDI 626
           +A+ E  ++ P ++   V   G RQL  P   +MS  P  +P+   ++            
Sbjct: 375 QALHEHNRRSPTELMSPVAFRGSRQLQPPPAHIMSSSPVAIPSSPLRETKATELPPSSPE 434

Query: 627 ARSKGKITSTSRIPSSGEVVDSQNPDSQWSPSPTTSSYKRKK 668
            R +G   ST   PS  E  DSQ   +  +PSP  S    KK
Sbjct: 435 KRRRGSSASTISAPSDDENFDSQLNTTPGTPSPVRSKISPKK 476


>pir||T13078 KIAA0992 protein - human (fragment) gi|4589628|dbj|BAA76836.1|
           KIAA0992 protein [Homo sapiens]
          Length = 772

 Score = 35.4 bits (80), Expect = 6.1
 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 27/106 (25%)

Query: 581 RLKKLPFQMKLEVKEGLRQL-----------------AFPETTLMSPPP----------R 613
           +L++L  Q++LE + G RQ                  AFPE    +PP           R
Sbjct: 48  KLQQLQNQIRLEQEAGARQPPPAPRSAPPSPPFPPPPAFPELAACTPPASPEPMSALASR 107

Query: 614 KVPTKGAKKKFDIARSKGKITSTSRIPSSGEVVDSQNPDSQWSPSP 659
             P   +   F+ AR K  I + +  P+SG    + +P S   PSP
Sbjct: 108 SAPAMQSSGSFNYARPKQFIAAQNLGPASGHGTPASSPSSSSLPSP 153


>ref|ZP_00410542.1| similar to Uncharacterized protein conserved in bacteria
           [Arthrobacter sp. FB24] gi|66870630|gb|EAL97994.1|
           similar to Uncharacterized protein conserved in bacteria
           [Arthrobacter sp. FB24]
          Length = 1154

 Score = 35.0 bits (79), Expect = 7.9
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 4/110 (3%)

Query: 551 GKHCAWTMTFVVVFKGHLTGYHVELKAIVERLKKLPFQMKLEVKEGLRQLAFPETTLMSP 610
           G   AW+         H      EL+   E LK+L F+         R+LA  +  L+S 
Sbjct: 389 GLELAWSAEGWEQAHTHAADRSAELQGDSEALKELRFEAFDGHATKKRELAAAQQELVSL 448

Query: 611 PPRK--VPTKGAKKKFDIARSKGKITSTSRIPSSGEVVDSQNPDSQWSPS 658
             RK  +P    + +  IA + G      ++P  GE++D    + QW P+
Sbjct: 449 KTRKSLLPPSSIENRTAIAAATG--VPEEQMPFGGELIDVAEGEEQWRPA 496


>ref|YP_000448.1| Ig-like repeat domain protein 3 [Leptospira interrogans serovar
            Copenhageni str. Fiocruz L1-130]
            gi|45599596|gb|AAS69085.1| Ig-like repeat domain protein
            3 [Leptospira interrogans serovar Copenhageni str.
            Fiocruz L1-130]
          Length = 1890

 Score = 35.0 bits (79), Expect = 7.9
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 19   NSGDVKPPNVEAKTNIDGASVHVEASKYVGGSGVLPLQPHEV-DTAKFF-----SDDVKS 72
            N  D   P V++  ++   ++ V  S+ +     L L  +++ D++ F      + D  S
Sbjct: 1119 NKTDTIAPTVQSVVSLSPTTIQVVYSESINNKEALDLSNYKIIDSSNFIGHCSDNTDFNS 1178

Query: 73   KNRDELLELVRRQANKAGFTIVTQRSSLINPMFRLVCERSGSH 115
             ++     L   + +K  FTI    S ++N  + LV  + G H
Sbjct: 1179 NSQTADFSLSSIKGSKNTFTITLSHSQILNKSYTLVVNKQGIH 1221


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.351    0.154    0.553 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,014,347,888
Number of Sequences: 2540612
Number of extensions: 37938858
Number of successful extensions: 154576
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 154573
Number of HSP's gapped (non-prelim): 6
length of query: 672
length of database: 863,360,394
effective HSP length: 135
effective length of query: 537
effective length of database: 520,377,774
effective search space: 279442864638
effective search space used: 279442864638
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (22.0 bits)
S2: 79 (35.0 bits)