BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.15 - phase: 0
(147 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB97163.1| histone H2B1 [Gossypium hirsutum] gi|7439759|pir|... 265 1e-70
gb|AAV84518.1| At5g59910 [Arabidopsis thaliana] gi|9757912|dbj|B... 250 6e-66
emb|CAB88327.1| histone H2B-like protein [Arabidopsis thaliana] ... 250 6e-66
emb|CAA73156.1| histone H2B [Arabidopsis thaliana] gi|7339499|em... 248 3e-65
gb|AAM63259.1| histone H2B-like protein [Arabidopsis thaliana] 248 3e-65
gb|AAM66958.1| histone H2B [Arabidopsis thaliana] 243 9e-64
gb|AAG48809.1| putative histone H2B protein [Arabidopsis thalian... 241 2e-63
emb|CAA12233.1| histone H2B [Lycopersicon esculentum] gi|7439756... 241 3e-63
gb|AAM62619.1| putative histone H2B [Arabidopsis thaliana] gi|21... 240 6e-63
emb|CAA12231.1| histone H2B-3 [Lycopersicon esculentum] gi|74397... 239 1e-62
emb|CAA72091.1| histone H2B1 [Nicotiana tabacum] gi|7387729|sp|P... 238 2e-62
emb|CAA12230.1| histone H2B-2 [Lycopersicon esculentum] gi|74397... 238 2e-62
gb|AAB94923.1| histone H2B [Capsicum annuum] gi|7387727|sp|O4911... 238 2e-62
dbj|BAB10609.1| histone H2B like protein [Arabidopsis thaliana] ... 235 1e-61
emb|CAA69025.1| histone H2B like protein [Arabidopsis thaliana] 234 4e-61
emb|CAB88668.1| histone H2B [Cicer arietinum] 231 3e-60
emb|CAB67672.1| histone H2B-like protein [Arabidopsis thaliana] ... 228 2e-59
emb|CAA40564.1| H2B histone [Zea mays] gi|283041|pir||S28048 his... 227 4e-59
ref|NP_909292.1| putative histone H2B [Oryza sativa (japonica cu... 226 7e-59
emb|CAA49584.1| H2B histone [Zea mays] gi|3913804|sp|Q43261|H2B3... 226 7e-59
>gb|AAB97163.1| histone H2B1 [Gossypium hirsutum] gi|7439759|pir||T09722 histone
H2B1 - upland cotton gi|7387726|sp|O22582|H2B_GOSHI
Histone H2B
Length = 147
Score = 265 bits (678), Expect = 1e-70
Identities = 140/148 (94%), Positives = 144/148 (96%), Gaps = 2/148 (1%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPK EKKPAEKKPAEEKK+ VAEKAPAEKKPKAGKKLPKEGG+AAGDKKK R KK+VET
Sbjct: 1 MAPKAEKKPAEKKPAEEKKA-VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 59
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 119
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
>gb|AAV84518.1| At5g59910 [Arabidopsis thaliana] gi|9757912|dbj|BAB08359.1| unnamed
protein product [Arabidopsis thaliana]
gi|15238563|ref|NP_200799.1| histone H2B [Arabidopsis
thaliana] gi|16323079|gb|AAL15274.1| AT5g59910/mmn10_130
[Arabidopsis thaliana] gi|27735192|sp|P40283|H2B_ARATH
Histone H2B
Length = 150
Score = 250 bits (638), Expect = 6e-66
Identities = 130/150 (86%), Positives = 136/150 (90%), Gaps = 3/150 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNV 57
MAPK EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G+ KKK KK+V
Sbjct: 1 MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60
Query: 58 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 117
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREI
Sbjct: 61 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120
Query: 118 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>emb|CAB88327.1| histone H2B-like protein [Arabidopsis thaliana]
gi|21536602|gb|AAM60934.1| histone H2B-like protein
[Arabidopsis thaliana] gi|15231313|ref|NP_190189.1|
histone H2B, putative [Arabidopsis thaliana]
Length = 145
Score = 250 bits (638), Expect = 6e-66
Identities = 130/147 (88%), Positives = 133/147 (90%), Gaps = 2/147 (1%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAPK EKKPAEKKP EEK AEKAPAEKKPKAGKKLPKE G+ KKK KK+VETY
Sbjct: 1 MAPKAEKKPAEKKPVEEKSK--AEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETY 58
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTA
Sbjct: 59 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTA 118
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 VRLVLPGELAKHAVSEGTKAVTKFTSS 145
>emb|CAA73156.1| histone H2B [Arabidopsis thaliana] gi|7339499|emb|CAB82822.1|
histone H2B [Arabidopsis thaliana]
gi|30102580|gb|AAP21208.1| At3g45980 [Arabidopsis
thaliana] gi|21592825|gb|AAM64775.1| histone H2B
[Arabidopsis thaliana] gi|15231304|ref|NP_190184.1|
histone H2B [Arabidopsis thaliana]
gi|11275242|pir||T47538 histone H2B - Arabidopsis
thaliana
Length = 150
Score = 248 bits (632), Expect = 3e-65
Identities = 129/150 (86%), Positives = 135/150 (90%), Gaps = 3/150 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNV 57
MAP+ EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G+ KKK KK+V
Sbjct: 1 MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60
Query: 58 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 117
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREI
Sbjct: 61 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 120
Query: 118 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>gb|AAM63259.1| histone H2B-like protein [Arabidopsis thaliana]
Length = 150
Score = 248 bits (632), Expect = 3e-65
Identities = 129/150 (86%), Positives = 135/150 (90%), Gaps = 3/150 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNV 57
MAPK EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G+ KKK KK+V
Sbjct: 1 MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60
Query: 58 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 117
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNK PTITSREI
Sbjct: 61 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKXPTITSREI 120
Query: 118 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>gb|AAM66958.1| histone H2B [Arabidopsis thaliana]
Length = 148
Score = 243 bits (619), Expect = 9e-64
Identities = 132/151 (87%), Positives = 137/151 (90%), Gaps = 7/151 (4%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKN 56
MAP+ EKKPAEKK A EK ++ AEKAPAEKKPKAGKKLP + AGDKKK RSKKN
Sbjct: 1 MAPRAEKKPAEKKTAAEKPVEENKAAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKKN 57
Query: 57 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 116
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSRE
Sbjct: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 117
Query: 117 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>gb|AAG48809.1| putative histone H2B protein [Arabidopsis thaliana]
gi|22137246|gb|AAM91468.1| At1g07790/F24B9_10
[Arabidopsis thaliana] gi|8439888|gb|AAF75074.1| Strong
similarity to histone H2B like protein from Arabidopsis
thaliana gb|Y07745. ESTs gb|R83948 and gb|T42349 come
from this gene gi|17979526|gb|AAL50098.1|
At1g07790/F24B9_10 [Arabidopsis thaliana]
gi|15223016|ref|NP_172258.1| histone H2B, putative
[Arabidopsis thaliana] gi|25294271|pir||D86213
hypothetical protein [imported] - Arabidopsis thaliana
Length = 148
Score = 241 bits (616), Expect = 2e-63
Identities = 131/151 (86%), Positives = 137/151 (89%), Gaps = 7/151 (4%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKN 56
MAP+ EKKPAEKK A E+ ++ AEKAPAEKKPKAGKKLP + AGDKKK RSKKN
Sbjct: 1 MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKKN 57
Query: 57 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 116
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSRE
Sbjct: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 117
Query: 117 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>emb|CAA12233.1| histone H2B [Lycopersicon esculentum] gi|7439756|pir||T06393
histone H2B - tomato
Length = 142
Score = 241 bits (615), Expect = 3e-63
Identities = 128/147 (87%), Positives = 134/147 (91%), Gaps = 5/147 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAPK KKPAEKKP EEKK AE+ PAEKKPKAGKKLPK+ G A KKK+SKK+VETY
Sbjct: 1 MAPKAGKKPAEKKPVEEKK---AEEVPAEKKPKAGKKLPKDAG--ADKKKKKSKKSVETY 55
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTA
Sbjct: 56 KIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTA 115
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 116 VRLVLPGELAKHAVSEGTKAVTKFTSN 142
>gb|AAM62619.1| putative histone H2B [Arabidopsis thaliana]
gi|21700841|gb|AAM70544.1| At2g28720/T11P11.3
[Arabidopsis thaliana] gi|4580384|gb|AAD24363.1|
putative histone H2B [Arabidopsis thaliana]
gi|16209685|gb|AAL14400.1| At2g28720/T11P11.3
[Arabidopsis thaliana] gi|13272409|gb|AAK17143.1|
putative histone H2B [Arabidopsis thaliana]
gi|15226943|ref|NP_180440.1| histone H2B, putative
[Arabidopsis thaliana] gi|25294272|pir||D84688 probable
histone H2B [imported] - Arabidopsis thaliana
Length = 151
Score = 240 bits (612), Expect = 6e-63
Identities = 128/151 (84%), Positives = 136/151 (89%), Gaps = 4/151 (2%)
Query: 1 MAPKGEKKPAEKKPAEE---KKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKN 56
MAPK KKPAEKKPAE+ ++ VAEKAPAEKKPKAGKKLPKE + +KKK R KK+
Sbjct: 1 MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60
Query: 57 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 116
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSRE
Sbjct: 61 TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120
Query: 117 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>emb|CAA12231.1| histone H2B-3 [Lycopersicon esculentum] gi|7439754|pir||T06390
histone H2B-3 - tomato (fragment)
Length = 137
Score = 239 bits (610), Expect = 1e-62
Identities = 130/141 (92%), Positives = 134/141 (94%), Gaps = 5/141 (3%)
Query: 8 KPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVETYKIYIFK 66
KPAEKKPAE K+ VAEKAPAEKKPKAGKKLPK+ +AAGDKKK RSKK VETYKIYIFK
Sbjct: 1 KPAEKKPAE--KTPVAEKAPAEKKPKAGKKLPKD--AAAGDKKKKRSKKAVETYKIYIFK 56
Query: 67 VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 126
VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLP
Sbjct: 57 VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLP 116
Query: 127 GELAKHAVSEGTKAVTKFTSS 147
GELAKHAVSEGTKAVTKFTSS
Sbjct: 117 GELAKHAVSEGTKAVTKFTSS 137
>emb|CAA72091.1| histone H2B1 [Nicotiana tabacum] gi|7387729|sp|P93354|H2B_TOBAC
Histone H2B gi|7439710|pir||T03268 histone H2B1 - common
tobacco
Length = 146
Score = 238 bits (608), Expect = 2e-62
Identities = 122/147 (82%), Positives = 135/147 (90%), Gaps = 1/147 (0%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAP+ +KKPAEKKP EK + VAEKAPAEKKP+AGKKLP++ G+A KKKR++ +VETY
Sbjct: 1 MAPRADKKPAEKKPGAEK-TPVAEKAPAEKKPRAGKKLPRDAGAAGDKKKKRAEMSVETY 59
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIF+VLK VHPDIGISSKAMGIMNSFINDIFEKLA+ESSRLA YNKKPTI+SREIQTA
Sbjct: 60 KIYIFRVLKHVHPDIGISSKAMGIMNSFINDIFEKLARESSRLAGYNKKPTISSREIQTA 119
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 VRLVLPGELAKHAVSEGTKAVTKFTSS 146
>emb|CAA12230.1| histone H2B-2 [Lycopersicon esculentum] gi|7439753|pir||T06389
histone H2B-2 - tomato (fragment)
Length = 139
Score = 238 bits (608), Expect = 2e-62
Identities = 127/147 (86%), Positives = 132/147 (89%), Gaps = 9/147 (6%)
Query: 2 APKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKR-SKKNVETY 60
APK EKKPAEKKPAEEKK AEK PKAGKKLPKE GS+ DKKK+ SKK++ETY
Sbjct: 1 APKAEKKPAEKKPAEEKK--------AEKTPKAGKKLPKESGSSGADKKKKKSKKSIETY 52
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTA
Sbjct: 53 KIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTA 112
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 113 VRLVLPGELAKHAVSEGTKAVTKFTSS 139
>gb|AAB94923.1| histone H2B [Capsicum annuum] gi|7387727|sp|O49118|H2B_CAPAN
Histone H2B (CaH2B) gi|7439757|pir||T08063 histone H2B -
pepper
Length = 145
Score = 238 bits (608), Expect = 2e-62
Identities = 128/149 (85%), Positives = 134/149 (89%), Gaps = 6/149 (4%)
Query: 1 MAPKGE--KKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVE 58
MAPK KKPAEKKP EEKK AE+ PAEKKPKAGKKLPK+ G KKKR+KK++E
Sbjct: 1 MAPKAAAGKKPAEKKPVEEKK---AEEVPAEKKPKAGKKLPKDAGRP-DKKKKRAKKSIE 56
Query: 59 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 118
TYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ
Sbjct: 57 TYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 116
Query: 119 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 117 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>dbj|BAB10609.1| histone H2B like protein [Arabidopsis thaliana]
gi|15237148|ref|NP_197679.1| histone H2B, putative
[Arabidopsis thaliana]
Length = 145
Score = 235 bits (600), Expect = 1e-61
Identities = 127/145 (87%), Positives = 130/145 (89%), Gaps = 3/145 (2%)
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKI 62
K +KKPAEKKPAE K+ AE A A EKKPKAGKKLPKE A KKKRSKKNVETYKI
Sbjct: 3 KADKKPAEKKPAE--KTPAAEPAAAAEKKPKAGKKLPKEPAGAGDKKKKRSKKNVETYKI 60
Query: 63 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 122
YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVR
Sbjct: 61 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVR 120
Query: 123 LVLPGELAKHAVSEGTKAVTKFTSS 147
LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145
>emb|CAA69025.1| histone H2B like protein [Arabidopsis thaliana]
Length = 145
Score = 234 bits (596), Expect = 4e-61
Identities = 126/145 (86%), Positives = 130/145 (88%), Gaps = 3/145 (2%)
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKI 62
K +KKPAEKKPAE K+ AE A A EKKPKAGKKLP+E A KKKRSKKNVETYKI
Sbjct: 3 KADKKPAEKKPAE--KTPAAEPAAAAEKKPKAGKKLPEEPAGAGDKKKKRSKKNVETYKI 60
Query: 63 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 122
YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVR
Sbjct: 61 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVR 120
Query: 123 LVLPGELAKHAVSEGTKAVTKFTSS 147
LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145
>emb|CAB88668.1| histone H2B [Cicer arietinum]
Length = 139
Score = 231 bits (589), Expect = 3e-60
Identities = 128/148 (86%), Positives = 131/148 (88%), Gaps = 10/148 (6%)
Query: 1 MAP-KGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVET 59
MAP K EKKPAEKKPA AEKAPAEKKPKA KK+ KEG S KKKR KK+VET
Sbjct: 1 MAPAKAEKKPAEKKPA-------AEKAPAEKKPKAEKKISKEGTS--DKKKKRVKKSVET 51
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 52 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 111
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 112 AVRLVLPGELAKHAVSEGTKAVTKFTSS 139
>emb|CAB67672.1| histone H2B-like protein [Arabidopsis thaliana]
gi|15231854|ref|NP_190933.1| histone H2B, putative
[Arabidopsis thaliana] gi|11275240|pir||T45905 histone
H2B-like protein - Arabidopsis thaliana
Length = 138
Score = 228 bits (581), Expect = 2e-59
Identities = 125/148 (84%), Positives = 129/148 (86%), Gaps = 11/148 (7%)
Query: 1 MAPKG-EKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVET 59
MAPK EKKPA KKPAE KAPAEK PKA KK+ KEGGS KKK+SKKN+ET
Sbjct: 1 MAPKAAEKKPAGKKPAE--------KAPAEKLPKAEKKITKEGGSEK--KKKKSKKNIET 50
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 51 YKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 110
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGEL+KHAVSEGTKAVTKFTSS
Sbjct: 111 AVRLVLPGELSKHAVSEGTKAVTKFTSS 138
>emb|CAA40564.1| H2B histone [Zea mays] gi|283041|pir||S28048 histone H2B - maize
gi|399853|sp|P30755|H2B1_MAIZE Histone H2B.1
Length = 151
Score = 227 bits (579), Expect = 4e-59
Identities = 124/152 (81%), Positives = 132/152 (86%), Gaps = 6/152 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP----KEGGSAAGDKKKRSKK 55
MAPK EKKPA KKPAEE+ +T EKAPA KKPKA K+LP KEGG KKK +KK
Sbjct: 1 MAPKAEKKPAAKKPAEEEPATEKVEKAPAGKKPKAEKRLPAGKSKEGGEGKKGKKK-AKK 59
Query: 56 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 115
+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSR
Sbjct: 60 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 119
Query: 116 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>ref|NP_909292.1| putative histone H2B [Oryza sativa (japonica cultivar-group)]
gi|13872944|dbj|BAB44049.1| putative histone H2B [Oryza
sativa (japonica cultivar-group)]
gi|9663987|dbj|BAB03628.1| putative histone H2B [Oryza
sativa (japonica cultivar-group)]
Length = 153
Score = 226 bits (577), Expect = 7e-59
Identities = 124/153 (81%), Positives = 133/153 (86%), Gaps = 6/153 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLPK---EGGSAAGDK--KKRSK 54
MAPK EKKPA KKPAEE+ + AEKAPA KKPKA K+LP E GS G K +K++K
Sbjct: 1 MAPKAEKKPAAKKPAEEEPAAEKAEKAPAGKKPKAEKRLPAGKGEKGSGEGKKAGRKKAK 60
Query: 55 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 114
K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITS
Sbjct: 61 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITS 120
Query: 115 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
>emb|CAA49584.1| H2B histone [Zea mays] gi|3913804|sp|Q43261|H2B3_MAIZE Histone
H2B.3
Length = 153
Score = 226 bits (577), Expect = 7e-59
Identities = 123/154 (79%), Positives = 133/154 (85%), Gaps = 8/154 (5%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP------KEGGSAAGDKKKRS 53
MAPK +KKPA KKPAEE+ +T AEKAPA KKPKA K+LP KEGG KKK +
Sbjct: 1 MAPKADKKPAAKKPAEEEPATEKAEKAPAGKKPKAEKRLPAGKSAGKEGGEGKKGKKK-A 59
Query: 54 KKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT 113
KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPT+T
Sbjct: 60 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTVT 119
Query: 114 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
SREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 SREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 153
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.306 0.125 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,929,567
Number of Sequences: 2540612
Number of extensions: 8994131
Number of successful extensions: 78532
Number of sequences better than 10.0: 2140
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 1115
Number of HSP's that attempted gapping in prelim test: 63744
Number of HSP's gapped (non-prelim): 10994
length of query: 147
length of database: 863,360,394
effective HSP length: 123
effective length of query: 24
effective length of database: 550,865,118
effective search space: 13220762832
effective search space used: 13220762832
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC139841.15