BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.13 - phase: 0
(148 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB97163.1| histone H2B1 [Gossypium hirsutum] gi|7439759|pir|... 272 1e-72
gb|AAV84518.1| At5g59910 [Arabidopsis thaliana] gi|9757912|dbj|B... 254 4e-67
emb|CAB88327.1| histone H2B-like protein [Arabidopsis thaliana] ... 254 4e-67
emb|CAA73156.1| histone H2B [Arabidopsis thaliana] gi|7339499|em... 251 2e-66
gb|AAM63259.1| histone H2B-like protein [Arabidopsis thaliana] 251 2e-66
gb|AAM66958.1| histone H2B [Arabidopsis thaliana] 249 1e-65
gb|AAG48809.1| putative histone H2B protein [Arabidopsis thalian... 248 2e-65
gb|AAM62619.1| putative histone H2B [Arabidopsis thaliana] gi|21... 246 6e-65
emb|CAA12231.1| histone H2B-3 [Lycopersicon esculentum] gi|74397... 246 1e-64
emb|CAA12230.1| histone H2B-2 [Lycopersicon esculentum] gi|74397... 245 2e-64
emb|CAA12233.1| histone H2B [Lycopersicon esculentum] gi|7439756... 244 2e-64
gb|AAB94923.1| histone H2B [Capsicum annuum] gi|7387727|sp|O4911... 243 7e-64
emb|CAA72091.1| histone H2B1 [Nicotiana tabacum] gi|7387729|sp|P... 242 1e-63
dbj|BAB10609.1| histone H2B like protein [Arabidopsis thaliana] ... 238 2e-62
emb|CAA69025.1| histone H2B like protein [Arabidopsis thaliana] 237 5e-62
emb|CAB88668.1| histone H2B [Cicer arietinum] 236 1e-61
emb|CAB67672.1| histone H2B-like protein [Arabidopsis thaliana] ... 231 3e-60
emb|CAA40564.1| H2B histone [Zea mays] gi|283041|pir||S28048 his... 230 5e-60
emb|CAA49584.1| H2B histone [Zea mays] gi|3913804|sp|Q43261|H2B3... 229 8e-60
gb|AAB04688.1| histone H2B gi|1708107|sp|P54348|H2B5_MAIZE Histo... 228 3e-59
>gb|AAB97163.1| histone H2B1 [Gossypium hirsutum] gi|7439759|pir||T09722 histone
H2B1 - upland cotton gi|7387726|sp|O22582|H2B_GOSHI
Histone H2B
Length = 147
Score = 272 bits (695), Expect = 1e-72
Identities = 141/148 (95%), Positives = 145/148 (97%), Gaps = 1/148 (0%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPK EKKPAEKKPAEEKK+ VAEKAPAEKKPKAGKKLPKEGG+AAGDKKKKR KK+VET
Sbjct: 1 MAPKAEKKPAEKKPAEEKKA-VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 59
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 119
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
>gb|AAV84518.1| At5g59910 [Arabidopsis thaliana] gi|9757912|dbj|BAB08359.1| unnamed
protein product [Arabidopsis thaliana]
gi|15238563|ref|NP_200799.1| histone H2B [Arabidopsis
thaliana] gi|16323079|gb|AAL15274.1| AT5g59910/mmn10_130
[Arabidopsis thaliana] gi|27735192|sp|P40283|H2B_ARATH
Histone H2B
Length = 150
Score = 254 bits (648), Expect = 4e-67
Identities = 134/151 (88%), Positives = 139/151 (91%), Gaps = 4/151 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKN 57
MAPK EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G A GDKKKK KK+
Sbjct: 1 MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKKS 59
Query: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 117
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSRE
Sbjct: 60 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 119
Query: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>emb|CAB88327.1| histone H2B-like protein [Arabidopsis thaliana]
gi|21536602|gb|AAM60934.1| histone H2B-like protein
[Arabidopsis thaliana] gi|15231313|ref|NP_190189.1|
histone H2B, putative [Arabidopsis thaliana]
Length = 145
Score = 254 bits (648), Expect = 4e-67
Identities = 134/148 (90%), Positives = 136/148 (91%), Gaps = 3/148 (2%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPK EKKPAEKKP EEK AEKAPAEKKPKAGKKLPKE G A GDKKKK KK+VET
Sbjct: 1 MAPKAEKKPAEKKPVEEKSK--AEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKKSVET 57
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQT
Sbjct: 58 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQT 117
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 AVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>emb|CAA73156.1| histone H2B [Arabidopsis thaliana] gi|7339499|emb|CAB82822.1|
histone H2B [Arabidopsis thaliana]
gi|30102580|gb|AAP21208.1| At3g45980 [Arabidopsis
thaliana] gi|21592825|gb|AAM64775.1| histone H2B
[Arabidopsis thaliana] gi|15231304|ref|NP_190184.1|
histone H2B [Arabidopsis thaliana]
gi|11275242|pir||T47538 histone H2B - Arabidopsis
thaliana
Length = 150
Score = 251 bits (642), Expect = 2e-66
Identities = 133/151 (88%), Positives = 138/151 (91%), Gaps = 4/151 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKN 57
MAP+ EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G A GDKKKK KK+
Sbjct: 1 MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKKS 59
Query: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 117
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSRE
Sbjct: 60 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSRE 119
Query: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>gb|AAM63259.1| histone H2B-like protein [Arabidopsis thaliana]
Length = 150
Score = 251 bits (642), Expect = 2e-66
Identities = 133/151 (88%), Positives = 138/151 (91%), Gaps = 4/151 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKN 57
MAPK EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G A GDKKKK KK+
Sbjct: 1 MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKKS 59
Query: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 117
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNK PTITSRE
Sbjct: 60 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKXPTITSRE 119
Query: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>gb|AAM66958.1| histone H2B [Arabidopsis thaliana]
Length = 148
Score = 249 bits (636), Expect = 1e-65
Identities = 133/151 (88%), Positives = 138/151 (91%), Gaps = 6/151 (3%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKN 57
MAP+ EKKPAEKK A EK ++ AEKAPAEKKPKAGKKLP + AGDKKKKRSKKN
Sbjct: 1 MAPRAEKKPAEKKTAAEKPVEENKAAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKKN 57
Query: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 117
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSRE
Sbjct: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 117
Query: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>gb|AAG48809.1| putative histone H2B protein [Arabidopsis thaliana]
gi|22137246|gb|AAM91468.1| At1g07790/F24B9_10
[Arabidopsis thaliana] gi|8439888|gb|AAF75074.1| Strong
similarity to histone H2B like protein from Arabidopsis
thaliana gb|Y07745. ESTs gb|R83948 and gb|T42349 come
from this gene gi|17979526|gb|AAL50098.1|
At1g07790/F24B9_10 [Arabidopsis thaliana]
gi|15223016|ref|NP_172258.1| histone H2B, putative
[Arabidopsis thaliana] gi|25294271|pir||D86213
hypothetical protein [imported] - Arabidopsis thaliana
Length = 148
Score = 248 bits (633), Expect = 2e-65
Identities = 132/151 (87%), Positives = 138/151 (90%), Gaps = 6/151 (3%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKN 57
MAP+ EKKPAEKK A E+ ++ AEKAPAEKKPKAGKKLP + AGDKKKKRSKKN
Sbjct: 1 MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKKN 57
Query: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 117
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSRE
Sbjct: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 117
Query: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>gb|AAM62619.1| putative histone H2B [Arabidopsis thaliana]
gi|21700841|gb|AAM70544.1| At2g28720/T11P11.3
[Arabidopsis thaliana] gi|4580384|gb|AAD24363.1|
putative histone H2B [Arabidopsis thaliana]
gi|16209685|gb|AAL14400.1| At2g28720/T11P11.3
[Arabidopsis thaliana] gi|13272409|gb|AAK17143.1|
putative histone H2B [Arabidopsis thaliana]
gi|15226943|ref|NP_180440.1| histone H2B, putative
[Arabidopsis thaliana] gi|25294272|pir||D84688 probable
histone H2B [imported] - Arabidopsis thaliana
Length = 151
Score = 246 bits (629), Expect = 6e-65
Identities = 129/151 (85%), Positives = 137/151 (90%), Gaps = 3/151 (1%)
Query: 1 MAPKGEKKPAEKKPAEE---KKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKN 57
MAPK KKPAEKKPAE+ ++ VAEKAPAEKKPKAGKKLPKE + +KKKKR KK+
Sbjct: 1 MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60
Query: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 117
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSRE
Sbjct: 61 TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120
Query: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>emb|CAA12231.1| histone H2B-3 [Lycopersicon esculentum] gi|7439754|pir||T06390
histone H2B-3 - tomato (fragment)
Length = 137
Score = 246 bits (627), Expect = 1e-64
Identities = 131/141 (92%), Positives = 135/141 (94%), Gaps = 4/141 (2%)
Query: 8 KPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETYKIYIFK 67
KPAEKKPAE K+ VAEKAPAEKKPKAGKKLPK+ +AAGDKKKKRSKK VETYKIYIFK
Sbjct: 1 KPAEKKPAE--KTPVAEKAPAEKKPKAGKKLPKD--AAAGDKKKKRSKKAVETYKIYIFK 56
Query: 68 VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 127
VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLP
Sbjct: 57 VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLP 116
Query: 128 GELAKHAVSEGTKAVTKFTSS 148
GELAKHAVSEGTKAVTKFTSS
Sbjct: 117 GELAKHAVSEGTKAVTKFTSS 137
>emb|CAA12230.1| histone H2B-2 [Lycopersicon esculentum] gi|7439753|pir||T06389
histone H2B-2 - tomato (fragment)
Length = 139
Score = 245 bits (625), Expect = 2e-64
Identities = 128/147 (87%), Positives = 133/147 (90%), Gaps = 8/147 (5%)
Query: 2 APKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETY 61
APK EKKPAEKKPAEEKK AEK PKAGKKLPKE GS+ DKKKK+SKK++ETY
Sbjct: 1 APKAEKKPAEKKPAEEKK--------AEKTPKAGKKLPKESGSSGADKKKKKSKKSIETY 52
Query: 62 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 121
KIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTA
Sbjct: 53 KIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTA 112
Query: 122 VRLVLPGELAKHAVSEGTKAVTKFTSS 148
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 113 VRLVLPGELAKHAVSEGTKAVTKFTSS 139
>emb|CAA12233.1| histone H2B [Lycopersicon esculentum] gi|7439756|pir||T06393
histone H2B - tomato
Length = 142
Score = 244 bits (624), Expect = 2e-64
Identities = 129/148 (87%), Positives = 136/148 (91%), Gaps = 6/148 (4%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAPK KKPAEKKP EEKK AE+ PAEKKPKAGKKLPK+ G+ DKKKK+SKK+VET
Sbjct: 1 MAPKAGKKPAEKKPVEEKK---AEEVPAEKKPKAGKKLPKDAGA---DKKKKKSKKSVET 54
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQT
Sbjct: 55 YKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQT 114
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 115 AVRLVLPGELAKHAVSEGTKAVTKFTSN 142
>gb|AAB94923.1| histone H2B [Capsicum annuum] gi|7387727|sp|O49118|H2B_CAPAN
Histone H2B (CaH2B) gi|7439757|pir||T08063 histone H2B -
pepper
Length = 145
Score = 243 bits (620), Expect = 7e-64
Identities = 130/150 (86%), Positives = 136/150 (90%), Gaps = 7/150 (4%)
Query: 1 MAPKGE--KKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNV 58
MAPK KKPAEKKP EEKK AE+ PAEKKPKAGKKLPK+ G DKKKKR+KK++
Sbjct: 1 MAPKAAAGKKPAEKKPVEEKK---AEEVPAEKKPKAGKKLPKDAGRP--DKKKKRAKKSI 55
Query: 59 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 118
ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI
Sbjct: 56 ETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 115
Query: 119 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 116 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>emb|CAA72091.1| histone H2B1 [Nicotiana tabacum] gi|7387729|sp|P93354|H2B_TOBAC
Histone H2B gi|7439710|pir||T03268 histone H2B1 - common
tobacco
Length = 146
Score = 242 bits (618), Expect = 1e-63
Identities = 126/148 (85%), Positives = 138/148 (93%), Gaps = 2/148 (1%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVET 60
MAP+ +KKPAEKKP EK + VAEKAPAEKKP+AGKKLP++ G AAGDKKKKR++ +VET
Sbjct: 1 MAPRADKKPAEKKPGAEK-TPVAEKAPAEKKPRAGKKLPRDAG-AAGDKKKKRAEMSVET 58
Query: 61 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
YKIYIF+VLK VHPDIGISSKAMGIMNSFINDIFEKLA+ESSRLA YNKKPTI+SREIQT
Sbjct: 59 YKIYIFRVLKHVHPDIGISSKAMGIMNSFINDIFEKLARESSRLAGYNKKPTISSREIQT 118
Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 AVRLVLPGELAKHAVSEGTKAVTKFTSS 146
>dbj|BAB10609.1| histone H2B like protein [Arabidopsis thaliana]
gi|15237148|ref|NP_197679.1| histone H2B, putative
[Arabidopsis thaliana]
Length = 145
Score = 238 bits (608), Expect = 2e-62
Identities = 130/146 (89%), Positives = 134/146 (91%), Gaps = 4/146 (2%)
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETYK 62
K +KKPAEKKPAE K+ AE A A EKKPKAGKKLPKE + AGDKKKKRSKKNVETYK
Sbjct: 3 KADKKPAEKKPAE--KTPAAEPAAAAEKKPKAGKKLPKEP-AGAGDKKKKRSKKNVETYK 59
Query: 63 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 122
IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAV
Sbjct: 60 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAV 119
Query: 123 RLVLPGELAKHAVSEGTKAVTKFTSS 148
RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 RLVLPGELAKHAVSEGTKAVTKFTSS 145
>emb|CAA69025.1| histone H2B like protein [Arabidopsis thaliana]
Length = 145
Score = 237 bits (604), Expect = 5e-62
Identities = 129/146 (88%), Positives = 134/146 (91%), Gaps = 4/146 (2%)
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGDKKKKRSKKNVETYK 62
K +KKPAEKKPAE K+ AE A A EKKPKAGKKLP+E + AGDKKKKRSKKNVETYK
Sbjct: 3 KADKKPAEKKPAE--KTPAAEPAAAAEKKPKAGKKLPEEP-AGAGDKKKKRSKKNVETYK 59
Query: 63 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 122
IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAV
Sbjct: 60 IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAV 119
Query: 123 RLVLPGELAKHAVSEGTKAVTKFTSS 148
RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 RLVLPGELAKHAVSEGTKAVTKFTSS 145
>emb|CAB88668.1| histone H2B [Cicer arietinum]
Length = 139
Score = 236 bits (601), Expect = 1e-61
Identities = 130/149 (87%), Positives = 133/149 (89%), Gaps = 11/149 (7%)
Query: 1 MAP-KGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVE 59
MAP K EKKPAEKKPA AEKAPAEKKPKA KK+ KEG S DKKKKR KK+VE
Sbjct: 1 MAPAKAEKKPAEKKPA-------AEKAPAEKKPKAEKKISKEGTS---DKKKKRVKKSVE 50
Query: 60 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 119
TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQ
Sbjct: 51 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQ 110
Query: 120 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 111 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 139
>emb|CAB67672.1| histone H2B-like protein [Arabidopsis thaliana]
gi|15231854|ref|NP_190933.1| histone H2B, putative
[Arabidopsis thaliana] gi|11275240|pir||T45905 histone
H2B-like protein - Arabidopsis thaliana
Length = 138
Score = 231 bits (589), Expect = 3e-60
Identities = 126/149 (84%), Positives = 131/149 (87%), Gaps = 12/149 (8%)
Query: 1 MAPKG-EKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKKRSKKNVE 59
MAPK EKKPA KKPAE KAPAEK PKA KK+ KEGGS +KKKK+SKKN+E
Sbjct: 1 MAPKAAEKKPAGKKPAE--------KAPAEKLPKAEKKITKEGGS---EKKKKKSKKNIE 49
Query: 60 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 119
TYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ
Sbjct: 50 TYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 109
Query: 120 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
TAVRLVLPGEL+KHAVSEGTKAVTKFTSS
Sbjct: 110 TAVRLVLPGELSKHAVSEGTKAVTKFTSS 138
>emb|CAA40564.1| H2B histone [Zea mays] gi|283041|pir||S28048 histone H2B - maize
gi|399853|sp|P30755|H2B1_MAIZE Histone H2B.1
Length = 151
Score = 230 bits (587), Expect = 5e-60
Identities = 125/153 (81%), Positives = 134/153 (86%), Gaps = 7/153 (4%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP----KEGGSAAGDKKKKRSK 55
MAPK EKKPA KKPAEE+ +T EKAPA KKPKA K+LP KEGG G K KK++K
Sbjct: 1 MAPKAEKKPAAKKPAEEEPATEKVEKAPAGKKPKAEKRLPAGKSKEGGE--GKKGKKKAK 58
Query: 56 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 115
K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITS
Sbjct: 59 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITS 118
Query: 116 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
REIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 REIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>emb|CAA49584.1| H2B histone [Zea mays] gi|3913804|sp|Q43261|H2B3_MAIZE Histone
H2B.3
Length = 153
Score = 229 bits (585), Expect = 8e-60
Identities = 124/155 (80%), Positives = 135/155 (87%), Gaps = 9/155 (5%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP------KEGGSAAGDKKKKR 53
MAPK +KKPA KKPAEE+ +T AEKAPA KKPKA K+LP KEGG G K KK+
Sbjct: 1 MAPKADKKPAAKKPAEEEPATEKAEKAPAGKKPKAEKRLPAGKSAGKEGGE--GKKGKKK 58
Query: 54 SKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTI 113
+KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPT+
Sbjct: 59 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTV 118
Query: 114 TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
TSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 TSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 153
>gb|AAB04688.1| histone H2B gi|1708107|sp|P54348|H2B5_MAIZE Histone H2B
gi|7439752|pir||T02077 histone H2B - maize
Length = 154
Score = 228 bits (580), Expect = 3e-59
Identities = 123/154 (79%), Positives = 134/154 (86%), Gaps = 6/154 (3%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLP--KEGGSAAGDKK-KKRS 54
MAPK EKKPA KK AEE+ K+ AEKAPA KKPKA K+LP K G GDKK +K++
Sbjct: 1 MAPKAEKKPAAKKVAEEEPSEKAAPAEKAPAGKKPKAEKRLPAGKSAGKEGGDKKGRKKA 60
Query: 55 KKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT 114
KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTIT
Sbjct: 61 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTIT 120
Query: 115 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
SREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 SREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 154
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.306 0.125 0.327
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,187,677
Number of Sequences: 2540612
Number of extensions: 9145755
Number of successful extensions: 86099
Number of sequences better than 10.0: 2438
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 1219
Number of HSP's that attempted gapping in prelim test: 68117
Number of HSP's gapped (non-prelim): 13152
length of query: 148
length of database: 863,360,394
effective HSP length: 124
effective length of query: 24
effective length of database: 548,324,506
effective search space: 13159788144
effective search space used: 13159788144
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC139841.13