BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139747.6 + phase: 0 /pseudo
(1770 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_002448.1| mucin 2 [Homo sapiens] gi|2506877|sp|Q02817|MUC... 44 0.050
gb|AAA59875.1| mucin 44 0.050
gb|AAA59163.1| mucin 44 0.050
emb|CAG79183.1| unnamed protein product [Yarrowia lipolytica CLI... 41 0.32
gb|AAK68356.1| Hypothetical protein F32A5.2a [Caenorhabditis ele... 41 0.42
pir||T16232 hypothetical protein F32A5.2 - Caenorhabditis elegans 41 0.42
ref|XP_312044.2| ENSANGP00000016899 [Anopheles gambiae str. PEST... 40 0.72
emb|CAG82132.1| unnamed protein product [Yarrowia lipolytica CLI... 40 0.94
dbj|BAA21556.1| hepatitis A virus receptor [Cercopithecus aethiops] 39 1.2
ref|YP_053115.1| membrane glycoprotein [Equid herpesvirus 1] gi|... 39 1.6
gb|AAU09476.1| gp2 [Equid herpesvirus 1] 39 1.6
gb|AAK61485.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
gb|AAK61484.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
gb|AAK61483.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
gb|AAK61482.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
gb|AAK61481.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
gb|AAK61480.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
gb|AAK61479.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
gb|AAK61478.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
gb|AAK61477.1| glycoprotein gp2 [Equine herpesvirus 1] 39 1.6
>ref|NP_002448.1| mucin 2 [Homo sapiens] gi|2506877|sp|Q02817|MUC2_HUMAN Mucin-2
precursor (Intestinal mucin 2) gi|454154|gb|AAB95295.1|
mucin [Homo sapiens]
Length = 5179
Score = 43.9 bits (102), Expect = 0.050
Identities = 36/93 (38%), Positives = 43/93 (45%), Gaps = 11/93 (11%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S + T P + P T T S P TT
Sbjct: 1631 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP--TTTPSSPITTT 1688
Query: 62 SS-----HSRPSPTLVPSGP--SLYLPSRGTRP 87
S + PSPT PS P + PS T P
Sbjct: 1689 PSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTP 1721
Score = 43.5 bits (101), Expect = 0.065
Identities = 27/76 (35%), Positives = 36/76 (46%), Gaps = 3/76 (3%)
Query: 2 IPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
I +TT PPTT P+ TTPS ++ T P + + P T T S P T
Sbjct: 1669 ITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTM 1728
Query: 62 SSHSRPSPTLVPSGPS 77
++ PSPT PS P+
Sbjct: 1729 TT---PSPTTTPSPPT 1741
Score = 43.5 bits (101), Expect = 0.065
Identities = 30/76 (39%), Positives = 39/76 (50%), Gaps = 7/76 (9%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S + T P + + P T T S P TT
Sbjct: 1552 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTT--PSPPTITTTTPPPTTTPSPPTTTT 1609
Query: 62 SSHSRPSPTLVPSGPS 77
++ P PT PS P+
Sbjct: 1610 TT---PPPTTTPSPPT 1622
Score = 40.4 bits (93), Expect = 0.55
Identities = 30/77 (38%), Positives = 40/77 (50%), Gaps = 8/77 (10%)
Query: 3 PSTTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
P+TT PPTT P+ TT TTP ++ S I P A+ ++ P T T S P T
Sbjct: 1473 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTT-TLPP--TTTPSPPTTT 1529
Query: 61 TSSHSRPSPTLVPSGPS 77
T++ P PT PS P+
Sbjct: 1530 TTT---PPPTTTPSPPT 1543
Score = 39.3 bits (90), Expect = 1.2
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 3 PSTTILPPTTIP----TKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
P+TT PPTT P T TT P++ S + T P +P T T S P
Sbjct: 1614 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPI 1669
Query: 59 NTTSSHSRPSPTLVPSGPSLYLPSRGT 85
TT++ P PT PS P PS T
Sbjct: 1670 TTTTT---PPPTTTPSSPITTTPSPPT 1693
Score = 39.3 bits (90), Expect = 1.2
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 15/76 (19%)
Query: 4 STTILPPTTIPTK--TTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
+TT LPPTT P+ TT TTP ++ S T PL T T S P +TT
Sbjct: 1412 TTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLP----------TTTPSPPISTT 1461
Query: 62 SSHSRPSPTLVPSGPS 77
++ P PT PS P+
Sbjct: 1462 TT---PPPTTTPSPPT 1474
Score = 38.1 bits (87), Expect = 2.7
Identities = 32/84 (38%), Positives = 42/84 (49%), Gaps = 9/84 (10%)
Query: 1 TIPSTTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
TI +TT PPTT P+ TT TTP ++ S + I P ++ P T T S P
Sbjct: 1590 TITTTT-PPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP-PTSTTTLPP--TTTPSPPP 1645
Query: 59 NTTSSHSRPSPTLVPSGPSLYLPS 82
TT++ P PT PS P+ PS
Sbjct: 1646 TTTTT---PPPTTTPSPPTTTTPS 1666
Score = 38.1 bits (87), Expect = 2.7
Identities = 31/89 (34%), Positives = 39/89 (42%), Gaps = 10/89 (11%)
Query: 4 STTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT--- 60
+TT PPTT P+ T TTPS + + T P + P T T S P T
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627
Query: 61 --TSSHSRPSPTLVPSGPSLYLPSRGTRP 87
TS+ + P PT PS P P+ T P
Sbjct: 1628 PPTSTTTLP-PTTTPSPP----PTTTTTP 1651
Score = 36.6 bits (83), Expect = 8.0
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 3 PSTTILPPTTIP----TKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
P+TT PPTT P T TT P++ S + T P +P T T S P
Sbjct: 1535 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPT 1590
Query: 59 NTTSSHSRPSPTLVPSGPS 77
TT++ P PT PS P+
Sbjct: 1591 ITTTT---PPPTTTPSPPT 1606
>gb|AAA59875.1| mucin
Length = 573
Score = 43.9 bits (102), Expect = 0.050
Identities = 36/93 (38%), Positives = 43/93 (45%), Gaps = 11/93 (11%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S + T P + P T T S P TT
Sbjct: 289 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP--TTTPSSPITTT 346
Query: 62 SS-----HSRPSPTLVPSGP--SLYLPSRGTRP 87
S + PSPT PS P + PS T P
Sbjct: 347 PSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTP 379
Score = 43.5 bits (101), Expect = 0.065
Identities = 30/76 (39%), Positives = 39/76 (50%), Gaps = 7/76 (9%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S + T P + + P T T S P TT
Sbjct: 210 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTT--PSPPTITTTTPPPTTTPSPPTTTT 267
Query: 62 SSHSRPSPTLVPSGPS 77
++ P PT PS P+
Sbjct: 268 TT---PPPTTTPSPPT 280
Score = 43.5 bits (101), Expect = 0.065
Identities = 27/76 (35%), Positives = 36/76 (46%), Gaps = 3/76 (3%)
Query: 2 IPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
I +TT PPTT P+ TTPS ++ T P + + P T T S P T
Sbjct: 327 ITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTM 386
Query: 62 SSHSRPSPTLVPSGPS 77
++ PSPT PS P+
Sbjct: 387 TT---PSPTTTPSPPT 399
Score = 41.2 bits (95), Expect = 0.32
Identities = 30/77 (38%), Positives = 41/77 (52%), Gaps = 8/77 (10%)
Query: 3 PSTTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
P+TT PPTT P+ TT TTP ++ S + I P A+ ++ P T T S P T
Sbjct: 131 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTT-TLPP--TTTPSPPTTT 187
Query: 61 TSSHSRPSPTLVPSGPS 77
T++ P PT PS P+
Sbjct: 188 TTT---PPPTTTPSPPT 201
Score = 39.3 bits (90), Expect = 1.2
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 3 PSTTILPPTTIP----TKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
P+TT PPTT P T TT P++ S + T P +P T T S P
Sbjct: 272 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPI 327
Query: 59 NTTSSHSRPSPTLVPSGPSLYLPSRGT 85
TT++ P PT PS P PS T
Sbjct: 328 TTTTT---PPPTTTPSSPITTTPSPPT 351
Score = 38.1 bits (87), Expect = 2.7
Identities = 31/89 (34%), Positives = 39/89 (42%), Gaps = 10/89 (11%)
Query: 4 STTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT--- 60
+TT PPTT P+ T TTPS + + T P + P T T S P T
Sbjct: 226 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 285
Query: 61 --TSSHSRPSPTLVPSGPSLYLPSRGTRP 87
TS+ + P PT PS P P+ T P
Sbjct: 286 PPTSTTTLP-PTTTPSPP----PTTTTTP 309
Score = 38.1 bits (87), Expect = 2.7
Identities = 32/84 (38%), Positives = 42/84 (49%), Gaps = 9/84 (10%)
Query: 1 TIPSTTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
TI +TT PPTT P+ TT TTP ++ S + I P ++ P T T S P
Sbjct: 248 TITTTT-PPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP-PTSTTTLPP--TTTPSPPP 303
Query: 59 NTTSSHSRPSPTLVPSGPSLYLPS 82
TT++ P PT PS P+ PS
Sbjct: 304 TTTTT---PPPTTTPSPPTTTTPS 324
Score = 37.7 bits (86), Expect = 3.6
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S T P T T S P +TT
Sbjct: 70 STTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTT----------TTPPPTTTPSPPISTT 119
Query: 62 SSHSRPSPTLVPSGPS 77
++ P PT PS P+
Sbjct: 120 TT---PPPTTTPSPPT 132
Score = 36.6 bits (83), Expect = 8.0
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 3 PSTTILPPTTIP----TKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
P+TT PPTT P T TT P++ S + T P +P T T S P
Sbjct: 193 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPT 248
Query: 59 NTTSSHSRPSPTLVPSGPS 77
TT++ P PT PS P+
Sbjct: 249 ITTTT---PPPTTTPSPPT 264
>gb|AAA59163.1| mucin
Length = 1270
Score = 43.9 bits (102), Expect = 0.050
Identities = 36/93 (38%), Positives = 43/93 (45%), Gaps = 11/93 (11%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S + T P + P T T S P TT
Sbjct: 1006 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPP--TTTPSSPITTT 1063
Query: 62 SS-----HSRPSPTLVPSGP--SLYLPSRGTRP 87
S + PSPT PS P + PS T P
Sbjct: 1064 PSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTP 1096
Score = 43.5 bits (101), Expect = 0.065
Identities = 27/76 (35%), Positives = 36/76 (46%), Gaps = 3/76 (3%)
Query: 2 IPSTTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
I +TT PPTT P+ TTPS ++ T P + + P T T S P T
Sbjct: 1044 ITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTM 1103
Query: 62 SSHSRPSPTLVPSGPS 77
++ PSPT PS P+
Sbjct: 1104 TT---PSPTTTPSPPT 1116
Score = 43.5 bits (101), Expect = 0.065
Identities = 30/76 (39%), Positives = 39/76 (50%), Gaps = 7/76 (9%)
Query: 4 STTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
STT LPPTT P+ TT TTP ++ S + T P + + P T T S P TT
Sbjct: 927 STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTT--PSPPTITTTTPPPTTTPSPPTTTT 984
Query: 62 SSHSRPSPTLVPSGPS 77
++ P PT PS P+
Sbjct: 985 TT---PPPTTTPSPPT 997
Score = 40.4 bits (93), Expect = 0.55
Identities = 30/77 (38%), Positives = 40/77 (50%), Gaps = 8/77 (10%)
Query: 3 PSTTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
P+TT PPTT P+ TT TTP ++ S I P A+ ++ P T T S P T
Sbjct: 848 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTT-TLPP--TTTPSPPTTT 904
Query: 61 TSSHSRPSPTLVPSGPS 77
T++ P PT PS P+
Sbjct: 905 TTT---PPPTTTPSPPT 918
Score = 39.3 bits (90), Expect = 1.2
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 15/76 (19%)
Query: 4 STTILPPTTIPTK--TTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTT 61
+TT LPPTT P+ TT TTP ++ S T PL T T S P +TT
Sbjct: 787 TTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLP----------TTTPSPPISTT 836
Query: 62 SSHSRPSPTLVPSGPS 77
++ P PT PS P+
Sbjct: 837 TT---PPPTTTPSPPT 849
Score = 39.3 bits (90), Expect = 1.2
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 3 PSTTILPPTTIP----TKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
P+TT PPTT P T TT P++ S + T P +P T T S P
Sbjct: 989 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPI 1044
Query: 59 NTTSSHSRPSPTLVPSGPSLYLPSRGT 85
TT++ P PT PS P PS T
Sbjct: 1045 TTTTT---PPPTTTPSSPITTTPSPPT 1068
Score = 38.1 bits (87), Expect = 2.7
Identities = 32/84 (38%), Positives = 42/84 (49%), Gaps = 9/84 (10%)
Query: 1 TIPSTTILPPTTIPT--KTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
TI +TT PPTT P+ TT TTP ++ S + I P ++ P T T S P
Sbjct: 965 TITTTT-PPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP-PTSTTTLPP--TTTPSPPP 1020
Query: 59 NTTSSHSRPSPTLVPSGPSLYLPS 82
TT++ P PT PS P+ PS
Sbjct: 1021 TTTTT---PPPTTTPSPPTTTTPS 1041
Score = 38.1 bits (87), Expect = 2.7
Identities = 31/89 (34%), Positives = 39/89 (42%), Gaps = 10/89 (11%)
Query: 4 STTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT--- 60
+TT PPTT P+ T TTPS + + T P + P T T S P T
Sbjct: 943 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1002
Query: 61 --TSSHSRPSPTLVPSGPSLYLPSRGTRP 87
TS+ + P PT PS P P+ T P
Sbjct: 1003 PPTSTTTLP-PTTTPSPP----PTTTTTP 1026
Score = 36.6 bits (83), Expect = 8.0
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 3 PSTTILPPTTIP----TKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPN 58
P+TT PPTT P T TT P++ S + T P +P T T S P
Sbjct: 910 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP----SPPTTTTPSPPT 965
Query: 59 NTTSSHSRPSPTLVPSGPS 77
TT++ P PT PS P+
Sbjct: 966 ITTTT---PPPTTTPSPPT 981
>emb|CAG79183.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50552384|ref|XP_503602.1| hypothetical protein
[Yarrowia lipolytica]
Length = 1391
Score = 41.2 bits (95), Expect = 0.32
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 6 TILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTTSSHS 65
TI PP++ + T T+ S SS++ S A AP + + GP++T +S S
Sbjct: 314 TIAPPSSSTVEATTTSAESSSSEAPSSSA------------APSSSASSEGPSSTEASSS 361
Query: 66 RPSPTLVPSGP--SLYLPSRGTRPRCGALFCS*ERGSETD 103
+P+ P S +PS P A S E S TD
Sbjct: 362 TEAPSSSSEAPSSSSEVPSSSEAPSSSAAESSTEAASSTD 401
>gb|AAK68356.1| Hypothetical protein F32A5.2a [Caenorhabditis elegans]
gi|17533605|ref|NP_495511.1| thyroid peroxidase
precursor (2H539) [Caenorhabditis elegans]
Length = 1000
Score = 40.8 bits (94), Expect = 0.42
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 1 TIPSTTILPPTT-IPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNN 59
T+PSTT++P TT IPT T TT ++ + QS + T+ P + T T +
Sbjct: 182 TVPSTTVIPTTTRIPTTVTTTTETTTTPQSTTTTTTVPP------TTTTSTTTTTTIATT 235
Query: 60 TTSSHSRPSPT--LVPS 74
TTS+ P P VPS
Sbjct: 236 TTSTSPAPVPVQQFVPS 252
>pir||T16232 hypothetical protein F32A5.2 - Caenorhabditis elegans
Length = 977
Score = 40.8 bits (94), Expect = 0.42
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 1 TIPSTTILPPTT-IPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNN 59
T+PSTT++P TT IPT T TT ++ + QS + T+ P + T T +
Sbjct: 182 TVPSTTVIPTTTRIPTTVTTTTETTTTPQSTTTTTTVPP------TTTTSTTTTTTIATT 235
Query: 60 TTSSHSRPSPT--LVPS 74
TTS+ P P VPS
Sbjct: 236 TTSTSPAPVPVQQFVPS 252
>ref|XP_312044.2| ENSANGP00000016899 [Anopheles gambiae str. PEST]
gi|55241906|gb|EAA07760.3| ENSANGP00000016899 [Anopheles
gambiae str. PEST]
Length = 297
Score = 40.0 bits (92), Expect = 0.72
Identities = 24/78 (30%), Positives = 38/78 (47%), Gaps = 3/78 (3%)
Query: 4 STTILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNTTSS 63
+T++ PTT + T TT ++ +AE T+ A + P T TE+ P+ TT++
Sbjct: 184 TTSVQAPTTTTEEATTTTAQPATTTTAEPTTTV---AQTTTTAEPTTTSTEAAPSTTTTA 240
Query: 64 HSRPSPTLVPSGPSLYLP 81
S S T PS + P
Sbjct: 241 ASTTSTTSEPSSTTTDAP 258
>emb|CAG82132.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50548703|ref|XP_501821.1| hypothetical protein
[Yarrowia lipolytica]
Length = 215
Score = 39.7 bits (91), Expect = 0.94
Identities = 24/81 (29%), Positives = 40/81 (48%), Gaps = 5/81 (6%)
Query: 7 ILPPTTIPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTE-----SGPNNTT 61
++PPT T T+ +TP+S S+ ++ S T P + + P T T S P +T+
Sbjct: 8 VVPPTPTSTPTSTSTPTSTSTPTSTSTPTSTPTSTPTSTSTPTSTPTSTSTPTSTPTSTS 67
Query: 62 SSHSRPSPTLVPSGPSLYLPS 82
+ S P+PT P+ P+
Sbjct: 68 TPTSTPTPTPTPTSTPTSTPT 88
>dbj|BAA21556.1| hepatitis A virus receptor [Cercopithecus aethiops]
Length = 460
Score = 39.3 bits (90), Expect = 1.2
Identities = 28/88 (31%), Positives = 42/88 (46%), Gaps = 3/88 (3%)
Query: 1 TIPSTTILPPTT-IPTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNN 59
T+P+TT LP TT +PT TT T ++ + T P L + P T + P
Sbjct: 150 TLPTTTTLPTTTTLPTTTTLPTTTTLPMTTTLPTTTTVPTTTTLPTTLPTTTLPTTLPTT 209
Query: 60 TTSSHSRPSPTLVPSGPSLYLPSRGTRP 87
TT + P+ T +P+ ++ LP T P
Sbjct: 210 TTLPTTLPTTTTLPT--TMTLPMTTTLP 235
>ref|YP_053115.1| membrane glycoprotein [Equid herpesvirus 1]
gi|49617055|gb|AAT67328.1| membrane glycoprotein [Equine
herpesvirus 1] gi|73738|pir||VGBEX1 glycoprotein X
precursor - equine herpesvirus 1 (strain Ab4p)
gi|138350|sp|P28968|VGLX_EHV1B Glycoprotein X precursor
Length = 797
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAU09476.1| gp2 [Equid herpesvirus 1]
Length = 791
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61485.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 826
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61484.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 374
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61483.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 356
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61482.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 342
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61481.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 332
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61480.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 389
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61479.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 337
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61478.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 357
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
>gb|AAK61477.1| glycoprotein gp2 [Equine herpesvirus 1]
Length = 372
Score = 38.9 bits (89), Expect = 1.6
Identities = 26/77 (33%), Positives = 37/77 (47%), Gaps = 3/77 (3%)
Query: 4 STTILPPTTI---PTKTTATTPSSGSSQSAESKATI*PLANDLWSIAPFFTCTESGPNNT 60
S T PPTT PT T ++PSS S+QS+ + AT + S T T + T
Sbjct: 52 SPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTSTETTTT 111
Query: 61 TSSHSRPSPTLVPSGPS 77
T + S +PT + P+
Sbjct: 112 TPTASTTTPTTTTAAPT 128
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.359 0.158 0.619
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,647,549,251
Number of Sequences: 2540612
Number of extensions: 100869374
Number of successful extensions: 401240
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 399210
Number of HSP's gapped (non-prelim): 812
length of query: 1770
length of database: 863,360,394
effective HSP length: 142
effective length of query: 1628
effective length of database: 502,593,490
effective search space: 818222201720
effective search space used: 818222201720
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 83 (36.6 bits)
Medicago: description of AC139747.6