BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139601.1 - phase: 0 /pseudo
(2139 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAG28313.1| putative SNF2 subfamily ATPase [Arabidopsis thal... 2281 0.0
ref|NP_182126.2| transcription regulatory protein SNF2, putative... 2281 0.0
ref|XP_463856.1| SNF2 domain/helicase domain-containing protein-... 1979 0.0
gb|AAC62900.1| putative SNF2 subfamily transcriptional activator... 1485 0.0
gb|AAC62901.1| hypothetical protein [Arabidopsis thaliana] gi|20... 804 0.0
dbj|BAD11104.1| SNF2-family ATP dependent chromatin remodeling f... 435 e-120
ref|XP_624270.1| PREDICTED: similar to ENSANGP00000013716 [Apis ... 427 e-117
ref|NP_001004446.1| SWI/SNF related, matrix associated, actin de... 423 e-116
gb|AAK39219.1| Hypothetical protein C52B9.8 [Caenorhabditis eleg... 419 e-115
gb|AAS53055.1| AER375Cp [Ashbya gossypii ATCC 10895] gi|45190977... 419 e-115
gb|AAC60670.1| homeotic gene regulator [Mus sp.] gi|2143481|pir|... 404 e-110
gb|AAH79560.1| Smarca4 protein [Mus musculus] 404 e-110
gb|AAH60229.1| SWI/SNF related, matrix associated, actin depende... 404 e-110
emb|CAD43278.1| brahma-related protein 1 [Rattus norvegicus] 404 e-110
ref|NP_990390.1| BRG1 protein [Gallus gallus] gi|996018|emb|CAA6... 403 e-110
ref|NP_003063.2| SWI/SNF-related matrix-associated actin-depende... 393 e-107
gb|AAG24790.1| SMARCA4 isoform 2 [Homo sapiens] 393 e-107
dbj|BAA05143.1| transcriptional activator hSNF2b [Homo sapiens] ... 392 e-107
ref|XP_343359.2| PREDICTED: SWI/SNF related, matrix associated, ... 390 e-106
ref|XP_533915.1| PREDICTED: similar to SWI/SNF-related matrix-as... 387 e-105
>emb|CAG28313.1| putative SNF2 subfamily ATPase [Arabidopsis thaliana]
gi|42571243|ref|NP_973695.1| transcription regulatory
protein SNF2, putative [Arabidopsis thaliana]
Length = 2193
Score = 2281 bits (5912), Expect = 0.0
Identities = 1293/2206 (58%), Positives = 1560/2206 (70%), Gaps = 176/2206 (7%)
Query: 1 MQLPPQSRNFFALAQHGPNQGQGIE-----QQRLNPVRQAYSQYALQSFQQRPALAMQSQ 55
MQ+P QSRNFF Q Q Q QQ NP++QAY Q+A+Q+ Q+ +Q
Sbjct: 96 MQMPQQSRNFFESPQQQQQQQQQGSSTQEGQQNFNPMQQAYIQFAMQAQHQK------AQ 149
Query: 56 QQPKMEMLGPTSV-KDQEMRMGNFKLQDLMSMQAVNHGQGSSSSRNSSEHFSHGEKRVEQ 114
QQ +M M+G +SV KDQ+ RMG +QDL +SSS+ S + F+ GE++ E
Sbjct: 150 QQARMGMVGSSSVGKDQDARMGMLNMQDLNPSSQPQ----ASSSKPSGDQFARGERQTES 205
Query: 115 GQQLASDKKNEGKSSTQG-LGIGHLMPGNNIRPVQALPTQQSIPIAMNNQIATSDQLRAM 173
Q ++NE KS Q +G G LMPGN IRP+QA QQ + NNQ+A + Q +AM
Sbjct: 206 SSQ----QRNETKSHPQQQVGTGQLMPGNMIRPMQAPQAQQLVNNMGNNQLAFAQQWQAM 261
Query: 174 QAWAHERNIDLSQPANANFAAQLNLMQTRMVQQSKES----GAQSSSVPVSKQQATSPAV 229
QAWA ERNIDLS PANA+ A +++Q RM Q K +QS S+P+S Q A+S V
Sbjct: 262 QAWARERNIDLSHPANASQMA--HILQARMAAQQKAGEGNVASQSPSIPISSQPASSSVV 319
Query: 230 SSEGSAHANSSTDVSALVGSVKARQTAPPSHLGLPINAGVAGNSSDTAVQQFSLHGRDAQ 289
E S HANS++D+S GS KAR + + + A+ FS GR+
Sbjct: 320 PGENSPHANSASDISGQSGSAKARHALSTGSFASTSSPRMV----NPAMNPFSGQGRENP 375
Query: 290 GSLKQLIVGVNGMPSMHPQQSSANKSLGADSSLNAKASSSRSDPEPAKMQYVRQLSQHAS 349
+ L+ NGMPS +P Q+SAN++ D NA S E +MQ RQL+
Sbjct: 376 MYPRHLVQPTNGMPSGNPLQTSANETPVLDQ--NASTKKSLGPAEHLQMQQPRQLNTPTP 433
Query: 350 LDGGSTKEVGSGNYAKPQGGPSQMPQKLNGFTKNQLHVLKAQILAFRRLKKGDGILPQEL 409
+ N + G +Q Q+ +GFTK QLHVLKAQILAFRRLKKG+G LP EL
Sbjct: 434 NLVAPSDTGPLSNSSLQSGQGTQQAQQRSGFTKQQLHVLKAQILAFRRLKKGEGSLPPEL 493
Query: 410 LEAISPPPLDLHVQQPIHSAGAQNQDKSMGNSVTEQPRQNEPKAKDSQPIVSFDGNS-SE 468
L+AISPPPL+L Q+ I A + QD+S + +Q R E K+SQ S +G S+
Sbjct: 494 LQAISPPPLELQTQRQISPAIGKVQDRSSDKTGEDQARSLEC-GKESQAAASSNGPIFSK 552
Query: 469 QETFVRDQKSTGAEVHMQAMLPVTKVS-----AGKEDQQSAGFSAKSDKKSEHVINRAPV 523
+E V D + H Q + K + A KE+QQ+ F KSD+ ++ + P
Sbjct: 553 EEDNVGDTEVALTTGHSQLFQNLGKEATSTDVATKEEQQTDVFPVKSDQGADSSTQKNPR 612
Query: 524 INDLALDKGKAVASQALVTDTAQINKPAQSSTVVGLPKDAGPAKKYYGPLFDFPFFTRKQ 583
+D DKGKAVAS D +Q P Q+++ PKD A+KYYGPLFDFPFFTRK
Sbjct: 613 -SDSTADKGKAVAS-----DGSQSKVPPQANSPQP-PKDTASARKYYGPLFDFPFFTRKL 665
Query: 584 DSFGSSMMANNNNNLSLAYDVKELLYEEGTEVFNKRRTENLKKIEGLLAVNLERKRIRPD 643
DS+GS+ AN NNNL+LAYD+K+L+ EEG E +K+RT++LKKI GLLA NLERKRIRPD
Sbjct: 666 DSYGSAT-ANANNNLTLAYDIKDLICEEGAEFLSKKRTDSLKKINGLLAKNLERKRIRPD 724
Query: 644 LVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMPDRPYRKFVKLCERQRVELARQVQT 703
LVL+LQIEEKKLRL DLQ+R+R E+D+QQQEIM+MPDRPYRKFV+LCERQR+E+ RQV
Sbjct: 725 LVLRLQIEEKKLRLSDLQSRVREEVDRQQQEIMSMPDRPYRKFVRLCERQRLEMNRQVLA 784
Query: 704 SQKALREKQLKSIFQWRKKLLEVHWAIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKR 763
+QKA+REKQLK+IFQWRKKLLE HWAIRDARTARNRGVAKYHEKML+EFSK KDD RNKR
Sbjct: 785 NQKAVREKQLKTIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDGRNKR 844
Query: 764 MEALKNNDVDRYREMLLEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQE 823
MEALKNNDV+RYREMLLEQQT++PGDAAERY VLS+FLTQTE+YL KLG KIT+ KNQQE
Sbjct: 845 MEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTEDYLHKLGGKITATKNQQE 904
Query: 824 VEESAKAAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDGSSSVSKYYNLAH 883
VEE+A AAA AARLQGLSEEEVRAAA CA EEV+IRNRF EMNAPK+ +SSV+KYY LAH
Sbjct: 905 VEEAANAAAVAARLQGLSEEEVRAAATCAREEVVIRNRFTEMNAPKE-NSSVNKYYTLAH 963
Query: 884 AVNEKVLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 943
AVNE V+RQPSML+AGTLR+YQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL
Sbjct: 964 AVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 1023
Query: 944 MEFKGNYGPHLIIVPNAVLVNWKCA-----------------------FNPENCIDHAE* 980
MEFKGNYGPHLIIVPNAVLVNWK F+ E C
Sbjct: 1024 MEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCA----- 1078
Query: 981 IAYMVTIGVMHFLCWIEGSSVK------IIFSTQRMKDRESVLARDLDRYRCHRRLLLTG 1034
+ + V + F+ + K II QRMKDRESVLARDLDRYRC RRLLLTG
Sbjct: 1079 MKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTG 1138
Query: 1035 TPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIH 1094
TPLQNDLKELWSLLNLLLP+VFDN+KAF+DWF++PFQKE P N E+DWLETEKKVI+IH
Sbjct: 1139 TPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIH 1198
Query: 1095 RLHQILEPFMLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQS 1154
RLHQILEPFMLRRRVE+VEGSLP KVS+VLRCRMSA QSA+YDWIK+TGTLR++P++E+
Sbjct: 1199 RLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKL 1258
Query: 1155 RMEKSPLYQAKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDFMVKCCGKLWMLDRILI 1214
R +K+P+YQAK Y+TLNNRCMELRK CNHPLLNYP+F+D SKDF+V+ CGKLW+LDRILI
Sbjct: 1259 RAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILI 1318
Query: 1215 KLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCF 1274
KLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTT+LEDRESAIVDFN P++DCF
Sbjct: 1319 KLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCF 1378
Query: 1275 IFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDK 1334
IFLLSIRAAGRGLNLQ+ADTVVIYDPDPNPKNEEQAVARAHRIGQ REVKVIYMEAVV+K
Sbjct: 1379 IFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEK 1438
Query: 1335 ISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQR 1394
+SSHQKEDE+R GG++D+ED++AGKDRYIGSIE LIR+NIQQYKIDMADEVINAGRFDQR
Sbjct: 1439 LSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQR 1498
Query: 1395 TTHEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLEEM 1454
TTHEERR+TLETLLHDEER QETVHDVPSL EVNRMIAR+EEEVELFDQMDEE DW EEM
Sbjct: 1499 TTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTEEM 1558
Query: 1455 TRYDQVPDWIRASTREVNAAIAASSKRPSKKNALSGGNVVLDSTEIGSERRRGRPKGKKN 1514
T ++QVP W+RASTREVNA +A SK+PS KN LS N+++ G ER+RGRPK KK
Sbjct: 1559 TNHEQVPKWLRASTREVNATVADLSKKPS-KNMLSSSNLIVQPGGPGGERKRGRPKSKK- 1616
Query: 1515 PSYKELEDS----SEEISEDRNEDSAH-DEGEIGEFEDDGYSGAGIAQPVDKDKLDDVTP 1569
+YKE+ED SEE SE+RN DS + +EG+I +F+DD +GA +K + D P
Sbjct: 1617 INYKEIEDDIAGYSEESSEERNIDSGNEEEGDIRQFDDDELTGALGDHQTNKGEFDGENP 1676
Query: 1570 SDAEYECPRSSSESARNNNVVEGGSSASSAGVQRLTQAVSPSVSSQKFASLSALDAKPSS 1629
Y+ P S +N + GSS SS R + SP VSSQKF SLSALD +P S
Sbjct: 1677 V-CGYDYPPGSGSYKKNPPRDDAGSSGSSPESHRSKEMASP-VSSQKFGSLSALDTRPGS 1734
Query: 1630 ISKKMVHGFILYFEYFILLPGGFYSIAFLLISSDKIYQGDELEEGEIAVSGESHMYHQQS 1689
+SK+++ D+LEEGEIA SG+SH+ Q+S
Sbjct: 1735 VSKRLL---------------------------------DDLEEGEIAASGDSHIDLQRS 1761
Query: 1690 GSWIHDRDEGEEEQVLQKPKIKRKRSLRVRPRHTMEKPEDKSGSEMASLQRGQSFLLPDK 1749
GSW HDRDEG+EEQVLQ P IKRKRS+R+RPR T E+ + GSEM + Q L D+
Sbjct: 1762 GSWAHDRDEGDEEQVLQ-PTIKRKRSIRLRPRQTAERVD---GSEMPAAQP----LQVDR 1813
Query: 1750 KYPLQSRINQESKTFGDSSSNKHDKNEPILKNKRNLPARKVANASKLHV-SPKSSRLNCT 1808
Y + +T DS S++ D+++ R++PA+KVA+ SKLHV SPKS RLN T
Sbjct: 1814 SY------RSKLRTVVDSHSSRQDQSDS-SSRLRSVPAKKVASTSKLHVSSPKSGRLNAT 1866
Query: 1809 SAPSEDNDEHSRERLKGKPNNLRGSSAHVTNMTEIIQRRCKSVISKLQRRIDKEGHQIVP 1868
EDN E SRE G + SS M+ IIQ+RCK VISKLQRRIDKEG QIVP
Sbjct: 1867 QLTVEDNAEASRETWDG--TSPISSSNAGARMSHIIQKRCKIVISKLQRRIDKEGQQIVP 1924
Query: 1869 LLTDLWKRIENSGFAGGSGNNLLDLRKIDQRINRLEYSGVMEFVFDVQFMLKSAMQFYGY 1928
+LT+LWKRI+N G+A G NNLL+LR+ID R+ RLEY+GVME DVQ ML+ AMQFYG+
Sbjct: 1925 MLTNLWKRIQN-GYAAGGVNNLLELREIDHRVERLEYAGVMELASDVQLMLRGAMQFYGF 1983
Query: 1929 SYEVRTEARKVHDLFFDILKTTFSDIDFGEAKSALSFT-SQISANAGASSKQATVFPSKR 1987
S+EVR+EA+KVH+LFFD+LK +F D DF EA++ALSF+ S + + + + A + KR
Sbjct: 1984 SHEVRSEAKKVHNLFFDLLKMSFPDTDFREARNALSFSGSAPTLVSTPTPRGAGISQGKR 2043
Query: 1988 KRGKNDMETDPTPTQKPLQRGSTSNSESGRIKVQLPQKASRTGSGSGSAREQLQQDSPSL 2047
++ N+ ET+P+ Q+ QR E+ RI+VQ+PQK ++ G + D +
Sbjct: 2044 QKLVNEPETEPSSPQRSQQR------ENSRIRVQIPQKETKLGGTTS------HTDESPI 2091
Query: 2048 LTHPGDLVVCKKKRNERGDKSSVKHRI-GSAGPVSPPKIVVHTVLAERSPTPGSGSTPR- 2105
L HPG+LV+CKKKR +R +KS K R GS+ PVSPP ++ L RSP SG PR
Sbjct: 2092 LAHPGELVICKKKRKDR-EKSGPKTRTGGSSSPVSPPPAMIGRGL--RSPV--SGGVPRE 2146
Query: 2106 ------------AGHAHTSNGSGGSVGWANPVKRMRTDSGKRRPSH 2139
H + S +G SVGWANPVKR+RTDSGKRRPSH
Sbjct: 2147 TRLAQQQRWPNQPTHPNNSGAAGDSVGWANPVKRLRTDSGKRRPSH 2192
>ref|NP_182126.2| transcription regulatory protein SNF2, putative [Arabidopsis
thaliana]
Length = 2192
Score = 2281 bits (5912), Expect = 0.0
Identities = 1292/2200 (58%), Positives = 1560/2200 (70%), Gaps = 165/2200 (7%)
Query: 1 MQLPPQSRNFFALAQHGPNQGQGIE-----QQRLNPVRQAYSQYALQSFQQRPALAMQSQ 55
MQ+P QSRNFF Q Q Q QQ NP++QAY Q+A+Q+ Q+ +Q
Sbjct: 96 MQMPQQSRNFFESPQQQQQQQQQGSSTQEGQQNFNPMQQAYIQFAMQAQHQK------AQ 149
Query: 56 QQPKMEMLGPTSV-KDQEMRMGNFKLQDLMSMQAVNHGQGSSSSRNSSEHFSHGEKRVEQ 114
QQ +M M+G +SV KDQ+ RMG +QDL +SSS+ S + F+ GE++ E
Sbjct: 150 QQARMGMVGSSSVGKDQDARMGMLNMQDLNPSSQPQ----ASSSKPSGDQFARGERQTES 205
Query: 115 GQQLASDKKNEGKSSTQG-LGIGHLMPGNNIRPVQALPTQQSIPIAMNNQIATSDQLRAM 173
Q ++NE KS Q +G G LMPGN IRP+QA QQ + NNQ+A + Q +AM
Sbjct: 206 SSQ----QRNETKSHPQQQVGTGQLMPGNMIRPMQAPQAQQLVNNMGNNQLAFAQQWQAM 261
Query: 174 QAWAHERNIDLSQPANANFAAQLNLMQTRMVQQSKES----GAQSSSVPVSKQQATSPAV 229
QAWA ERNIDLS PANA+ A +++Q RM Q K +QS S+P+S Q A+S V
Sbjct: 262 QAWARERNIDLSHPANASQMA--HILQARMAAQQKAGEGNVASQSPSIPISSQPASSSVV 319
Query: 230 SSEGSAHANSSTDVSALVGSVKARQTAPPSHLGLPINAGVAGNSSDTAVQQFSLHGRDAQ 289
E S HANS++D+S GS KAR + + + A+ FS GR+
Sbjct: 320 PGENSPHANSASDISGQSGSAKARHALSTGSFASTSSPRMV----NPAMNPFSGQGRENP 375
Query: 290 GSLKQLIVGVNGMPSMHPQQSSANKSLGADSSLNAKASSSRSDPEPAKMQYVRQLSQHAS 349
+ L+ NGMPS +P Q+SAN++ D NA S E +MQ RQL+
Sbjct: 376 MYPRHLVQPTNGMPSGNPLQTSANETPVLDQ--NASTKKSLGPAEHLQMQQPRQLNTPTP 433
Query: 350 LDGGSTKEVGSGNYAKPQGGPSQMPQKLNGFTKNQLHVLKAQILAFRRLKKGDGILPQEL 409
+ N + G +Q Q+ +GFTK QLHVLKAQILAFRRLKKG+G LP EL
Sbjct: 434 NLVAPSDTGPLSNSSLQSGQGTQQAQQRSGFTKQQLHVLKAQILAFRRLKKGEGSLPPEL 493
Query: 410 LEAISPPPLDLHVQQPIHSAGAQNQDKSMGNSVTEQPRQNEPKAKDSQPIVSFDGNS-SE 468
L+AISPPPL+L Q+ I A + QD+S + +Q R E K+SQ S +G S+
Sbjct: 494 LQAISPPPLELQTQRQISPAIGKVQDRSSDKTGEDQARSLEC-GKESQAAASSNGPIFSK 552
Query: 469 QETFVRDQKSTGAEVHMQAMLPVTKVS-----AGKEDQQSAGFSAKSDKKSEHVINRAPV 523
+E V D + H Q + K + A KE+QQ+ F KSD+ ++ + P
Sbjct: 553 EEDNVGDTEVALTTGHSQLFQNLGKEATSTDVATKEEQQTDVFPVKSDQGADSSTQKNPR 612
Query: 524 INDLALDKGKAVASQALVTDTAQINKPAQSSTVVGLPKDAGPAKKYYGPLFDFPFFTRKQ 583
+D DKGKAVAS D +Q P Q+++ PKD A+KYYGPLFDFPFFTRK
Sbjct: 613 -SDSTADKGKAVAS-----DGSQSKVPPQANSPQP-PKDTASARKYYGPLFDFPFFTRKL 665
Query: 584 DSFGSSMMANNNNNLSLAYDVKELLYEEGTEVFNKRRTENLKKIEGLLAVNLERKRIRPD 643
DS+GS+ AN NNNL+LAYD+K+L+ EEG E +K+RT++LKKI GLLA NLERKRIRPD
Sbjct: 666 DSYGSAT-ANANNNLTLAYDIKDLICEEGAEFLSKKRTDSLKKINGLLAKNLERKRIRPD 724
Query: 644 LVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMPDRPYRKFVKLCERQRVELARQVQT 703
LVL+LQIEEKKLRL DLQ+R+R E+D+QQQEIM+MPDRPYRKFV+LCERQR+E+ RQV
Sbjct: 725 LVLRLQIEEKKLRLSDLQSRVREEVDRQQQEIMSMPDRPYRKFVRLCERQRLEMNRQVLA 784
Query: 704 SQKALREKQLKSIFQWRKKLLEVHWAIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKR 763
+QKA+REKQLK+IFQWRKKLLE HWAIRDARTARNRGVAKYHEKML+EFSK KDD RNKR
Sbjct: 785 NQKAVREKQLKTIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDGRNKR 844
Query: 764 MEALKNNDVDRYREMLLEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQE 823
MEALKNNDV+RYREMLLEQQT++PGDAAERY VLS+FLTQTE+YL KLG KIT+ KNQQE
Sbjct: 845 MEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTEDYLHKLGGKITATKNQQE 904
Query: 824 VEESAKAAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDGSSSVSKYYNLAH 883
VEE+A AAA AARLQGLSEEEVRAAA CA EEV+IRNRF EMNAPK+ +SSV+KYY LAH
Sbjct: 905 VEEAANAAAVAARLQGLSEEEVRAAATCAREEVVIRNRFTEMNAPKE-NSSVNKYYTLAH 963
Query: 884 AVNEKVLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 943
AVNE V+RQPSML+AGTLR+YQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL
Sbjct: 964 AVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 1023
Query: 944 MEFKGNYGPHLIIVPNAVLVNWKCAFNP----ENCI-------------DHAE*IAYMVT 986
MEFKGNYGPHLIIVPNAVLVNWK + +CI + + V
Sbjct: 1024 MEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQVKFEKFNVL 1083
Query: 987 IGVMHFLCWIEGSSVK------IIFSTQRMKDRESVLARDLDRYRCHRRLLLTGTPLQND 1040
+ F+ + K II QRMKDRESVLARDLDRYRC RRLLLTGTPLQND
Sbjct: 1084 VTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQND 1143
Query: 1041 LKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQIL 1100
LKELWSLLNLLLP+VFDN+KAF+DWF++PFQKE P N E+DWLETEKKVI+IHRLHQIL
Sbjct: 1144 LKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQIL 1203
Query: 1101 EPFMLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSP 1160
EPFMLRRRVE+VEGSLP KVS+VLRCRMSA QSA+YDWIK+TGTLR++P++E+ R +K+P
Sbjct: 1204 EPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNP 1263
Query: 1161 LYQAKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDFMVKCCGKLWMLDRILIKLQRTG 1220
+YQAK Y+TLNNRCMELRK CNHPLLNYP+F+D SKDF+V+ CGKLW+LDRILIKLQRTG
Sbjct: 1264 IYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTG 1323
Query: 1221 HRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFIFLLSI 1280
HRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTT+LEDRESAIVDFN P++DCFIFLLSI
Sbjct: 1324 HRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSI 1383
Query: 1281 RAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQK 1340
RAAGRGLNLQ+ADTVVIYDPDPNPKNEEQAVARAHRIGQ REVKVIYMEAVV+K+SSHQK
Sbjct: 1384 RAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQK 1443
Query: 1341 EDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRTTHEER 1400
EDE+R GG++D+ED++AGKDRYIGSIE LIR+NIQQYKIDMADEVINAGRFDQRTTHEER
Sbjct: 1444 EDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEER 1503
Query: 1401 RLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLEEMTRYDQV 1460
R+TLETLLHDEER QETVHDVPSL EVNRMIAR+EEEVELFDQMDEE DW EEMT ++QV
Sbjct: 1504 RMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTEEMTNHEQV 1563
Query: 1461 PDWIRASTREVNAAIAASSKRPSKKNALSGGNVVLDSTEIGSERRRGRPKGKKNPSYKEL 1520
P W+RASTREVNA +A SK+PS KN LS N+++ G ER+RGRPK KK +YKE+
Sbjct: 1564 PKWLRASTREVNATVADLSKKPS-KNMLSSSNLIVQPGGPGGERKRGRPKSKK-INYKEI 1621
Query: 1521 EDS----SEEISEDRNEDSAH-DEGEIGEFEDDGYSGAGIAQPVDKDKLDDVTPSDAEYE 1575
ED SEE SE+RN DS + +EG+I +F+DD +GA +K + D P Y+
Sbjct: 1622 EDDIAGYSEESSEERNIDSGNEEEGDIRQFDDDELTGALGDHQTNKGEFDGENPV-CGYD 1680
Query: 1576 CPRSSSESARNNNVVEGGSSASSAGVQRLTQAVSPSVSSQKFASLSALDAKPSSISKKMV 1635
P S +N + GSS SS R + SP VSSQKF SLSALD +P S+SK+++
Sbjct: 1681 YPPGSGSYKKNPPRDDAGSSGSSPESHRSKEMASP-VSSQKFGSLSALDTRPGSVSKRLL 1739
Query: 1636 HGFILYFEYFILLPGGFYSIAFLLISSDKIYQGDELEEGEIAVSGESHMYHQQSGSWIHD 1695
D+LEEGEIA SG+SH+ Q+SGSW HD
Sbjct: 1740 ---------------------------------DDLEEGEIAASGDSHIDLQRSGSWAHD 1766
Query: 1696 RDEGEEEQVLQKPKIKRKRSLRVRPRHTMEKPEDKSGSEMASLQRGQSFLLPDKKYPLQS 1755
RDEG+EEQVLQ P IKRKRS+R+RPR T E+ + GSEM + Q L D+ Y
Sbjct: 1767 RDEGDEEQVLQ-PTIKRKRSIRLRPRQTAERVD---GSEMPAAQP----LQVDRSY---- 1814
Query: 1756 RINQESKTFGDSSSNKHDKNEPILKNKRNLPARKVANASKLHV-SPKSSRLNCTSAPSED 1814
+ +T DS S++ D+++ R++PA+KVA+ SKLHV SPKS RLN T ED
Sbjct: 1815 --RSKLRTVVDSHSSRQDQSDS-SSRLRSVPAKKVASTSKLHVSSPKSGRLNATQLTVED 1871
Query: 1815 NDEHSRERLKGKPNNLRGSSAHVTNMTEIIQRRCKSVISKLQRRIDKEGHQIVPLLTDLW 1874
N E SRE G + SS M+ IIQ+RCK VISKLQRRIDKEG QIVP+LT+LW
Sbjct: 1872 NAEASRETWDG--TSPISSSNAGARMSHIIQKRCKIVISKLQRRIDKEGQQIVPMLTNLW 1929
Query: 1875 KRIENSGFAGGSGNNLLDLRKIDQRINRLEYSGVMEFVFDVQFMLKSAMQFYGYSYEVRT 1934
KRI+N G+A G NNLL+LR+ID R+ RLEY+GVME DVQ ML+ AMQFYG+S+EVR+
Sbjct: 1930 KRIQN-GYAAGGVNNLLELREIDHRVERLEYAGVMELASDVQLMLRGAMQFYGFSHEVRS 1988
Query: 1935 EARKVHDLFFDILKTTFSDIDFGEAKSALSFT-SQISANAGASSKQATVFPSKRKRGKND 1993
EA+KVH+LFFD+LK +F D DF EA++ALSF+ S + + + + A + KR++ N+
Sbjct: 1989 EAKKVHNLFFDLLKMSFPDTDFREARNALSFSGSAPTLVSTPTPRGAGISQGKRQKLVNE 2048
Query: 1994 METDPTPTQKPLQRGSTSNSESGRIKVQLPQKASRTGSGSGSAREQLQQDSPSLLTHPGD 2053
ET+P+ Q+ QR E+ RI+VQ+PQK ++ G + D +L HPG+
Sbjct: 2049 PETEPSSPQRSQQR------ENSRIRVQIPQKETKLGGTTS------HTDESPILAHPGE 2096
Query: 2054 LVVCKKKRNERGDKSSVKHRI-GSAGPVSPPKIVVHTVLAERSPTPGSGSTPR------- 2105
LV+CKKKR +R +KS K R GS+ PVSPP ++ L RSP SG PR
Sbjct: 2097 LVICKKKRKDR-EKSGPKTRTGGSSSPVSPPPAMIGRGL--RSPV--SGGVPRETRLAQQ 2151
Query: 2106 ------AGHAHTSNGSGGSVGWANPVKRMRTDSGKRRPSH 2139
H + S +G SVGWANPVKR+RTDSGKRRPSH
Sbjct: 2152 QRWPNQPTHPNNSGAAGDSVGWANPVKRLRTDSGKRRPSH 2191
>ref|XP_463856.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa
(japonica cultivar-group)] gi|41052776|dbj|BAD07645.1|
SNF2 domain/helicase domain-containing protein-like
[Oryza sativa (japonica cultivar-group)]
gi|41052581|dbj|BAD07923.1| SNF2 domain/helicase
domain-containing protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 2200
Score = 1979 bits (5127), Expect = 0.0
Identities = 1158/2212 (52%), Positives = 1452/2212 (65%), Gaps = 191/2212 (8%)
Query: 17 GPNQGQGIEQQRLNPVRQAYSQYALQSFQQRP-ALAMQSQQQPKMEMLGPTSVKDQEMRM 75
GP G +Q ++QAY QY +Q QQ+ + +Q QQQ KM M GP S +DQ++
Sbjct: 90 GPQGLAGGQQHNPTAMQQAYLQYMMQQQQQKAHGMLLQQQQQAKMNMAGP-STRDQDVAA 148
Query: 76 GNFKLQDLMSMQAVNHGQGSSSSRNSSEHFSHGEKRVEQGQQLASDKKNEG----KSSTQ 131
K+Q+LMS+QA Q R SEH EK+ EQGQ S++++ Q
Sbjct: 149 NTAKMQELMSLQA--QAQAQMFKRQQSEHLQQAEKQAEQGQPSNSEQRSGDMRPPSMPPQ 206
Query: 132 GLGIGHLMPGNNIRPVQALPTQQSIPIAMNNQIATSDQLRAMQAWAHERNIDLSQPANAN 191
G+ L +RP+Q + Q + A N +A + QL+A+QAWA E N+DLS PAN
Sbjct: 207 GVPGQQLSSAGMVRPMQPMQGQAGMSNAGANPMAMA-QLQAIQAWAKEHNVDLSNPANVT 265
Query: 192 FAAQL--NLMQTRMVQQSKESGAQSSSVPVSKQQATSPAVSSEGSAHANSSTDVSALVGS 249
+Q+ L RM K++ +S +QQ+ ++++ H+N + +
Sbjct: 266 LISQILPMLQSNRMAAMQKQNEVGMAS----QQQSVPSQMNNDAPGHSNFPSQGAPS--- 318
Query: 250 VKARQTAPPSHLGLPINAG----VAGNSSDTAVQQFSLHGRDAQG--SLKQLIVGVNGMP 303
K RQ PPS ++ G + S+ QQ + H RD+ + + + NG
Sbjct: 319 -KPRQPLPPS---TSVSGGAEPKMMNMSNMQMQQQLAAHNRDSSNDRAARPAMSMGNGGQ 374
Query: 304 SMHPQQSSANKSLGADSSLNAKASSSRSDPEPAKMQYVRQLSQ--HASLDGGSTKEVGSG 361
MH QSS G + + + + ++ E +MQY RQL Q A+ ++ E G
Sbjct: 375 MMHMPQSS-----GHANKIPEQPNPKNANSEAMQMQYARQLQQANRATAPSANSGETGGS 429
Query: 362 NYAKPQGGPSQMPQKLNGFTKNQLHVLKAQILAFRRLKKGDGILPQELLEAI-SPPPLDL 420
P+Q + GFTK+QLHVLKAQILAFRRLK+GD LP E+L+ I S PP D
Sbjct: 430 Q------APNQAARPPMGFTKHQLHVLKAQILAFRRLKRGDKKLPPEVLDLIMSGPPPDS 483
Query: 421 HVQQPIHSAGAQNQDKSMGNSVTEQPRQNEPK--AKDSQPIVSFDGNSSEQETFVRDQKS 478
QQ + N+++S +S E R E A + ++ + E + K+
Sbjct: 484 QAQQ-VSGPPVTNRERSATSSADEHGRPVESGGIAPERSSLLKAPC-LPKVEVSAPEDKT 541
Query: 479 TGAEVHMQAMLPVTK----VSAGKEDQQSAGFSAKSDKKSEHVINRAPVINDLALDKGKA 534
A MQ M K + +Q+ KS++ E I R P +D ++GK+
Sbjct: 542 IPASGPMQVMKASPKEPLRIGPVSMPEQTNTTLIKSEQDPERGIQRTPGRSDYNGERGKS 601
Query: 535 VASQALVTDTAQINKPAQSSTVVGLPKDAGPAKKYYGPLFDFPFFTRKQDSFGSSMMANN 594
+ +++ D Q + A SS+V +D ++KY+GPLFDFP FTRK DS S AN
Sbjct: 602 LPAESGSADAEQAKRAASSSSVPTPNRDV--SRKYHGPLFDFPSFTRKHDSMVS---ANY 656
Query: 595 NNNLSLAYDVKELLYEEGTEVFNKRRTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKK 654
N+NL+L YDVK+LL +EG V K+R +NLKKI GLLA+NLERKRI+PDLVL+LQIEEKK
Sbjct: 657 NSNLALGYDVKDLLAQEGMIVLGKKREDNLKKISGLLAINLERKRIQPDLVLRLQIEEKK 716
Query: 655 LRLLDLQARLRGEIDQQQQEIMAMPDRPYRKFVKLCERQRVELARQVQTSQKALREKQLK 714
L+LL+ QAR+R E++Q+QQEIMAMPDR YRKFV+ CERQRVEL RQVQ QKA REKQLK
Sbjct: 717 LKLLEFQARMRDEVEQEQQEIMAMPDRVYRKFVRQCERQRVELTRQVQQMQKASREKQLK 776
Query: 715 SIFQWRKKLLEVHWAIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDR 774
SIFQWRKKLLE HWAIRDAR RNRGVAKYHE+ML+EFSK KDDDRNKRMEALKNNDV+R
Sbjct: 777 SIFQWRKKLLEAHWAIRDARITRNRGVAKYHERMLREFSKKKDDDRNKRMEALKNNDVER 836
Query: 775 YREMLLEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAA 834
YR++LLEQQTS+PGDAA+RYNVLS+FLTQTEEYL KLG KIT+AKN Q+VEE+A AAAAA
Sbjct: 837 YRQILLEQQTSVPGDAAQRYNVLSSFLTQTEEYLYKLGGKITAAKNHQQVEEAANAAAAA 896
Query: 835 ARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDGSSSVSKYYNLAHAVNEKVLRQPS 894
AR QGLSEEEV+AAA CAG+EVMIRN F EMNAP++ ++SV+KYY LAHAVNE+V RQPS
Sbjct: 897 ARAQGLSEEEVKAAAQCAGQEVMIRNTFSEMNAPRE-NTSVNKYYTLAHAVNERVTRQPS 955
Query: 895 MLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHL 954
+LRAGTLR+YQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVM+LIAYLMEFKGNYGPHL
Sbjct: 956 LLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMSLIAYLMEFKGNYGPHL 1015
Query: 955 IIVPNAVLVNWKCAFNPENCIDHAE*IAYMVTIGVMHFLCWIEGSSVK------IIFSTQ 1008
IIVPNAVLVNWK + + V + F+ + + II Q
Sbjct: 1016 IIVPNAVLVNWKEVLA----------VKFNVLVTTYEFVMYDRSKLSRIDWKYIIIDEAQ 1065
Query: 1009 RMKDRESVLARDLDRYRCHRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSK 1068
RMKDRESVLARDLDRYRC RRLLLTGTPLQNDLKELWSLLNLLLPEVFDN+KAF DWFSK
Sbjct: 1066 RMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFQDWFSK 1125
Query: 1069 PFQKEDP-NQNAENDWLETEKKVIIIHRLHQILEPFMLRRRVEEVEGSLPPKV------- 1120
PFQ++ P + E+DWLETEKKVIIIHRLHQILEPFMLRRRVE+VEGSLP KV
Sbjct: 1126 PFQRDVPTHSEEEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPRKVDCSALVT 1185
Query: 1121 ------------------------SIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRM 1156
SIVLRCRMS Q AIYDWIKSTGT+R++PE+E++R+
Sbjct: 1186 LSDAICHSALFVCYIVNSSCHLQESIVLRCRMSGIQGAIYDWIKSTGTIRVDPEDEKARI 1245
Query: 1157 EKSPLYQAKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDFMVKCCGKLWMLDRILIKL 1216
+++ +YQAK YK LNN+CMELRK CNHPLL+YPF + KDF+++ CGKLW LDRILIKL
Sbjct: 1246 QRNAMYQAKTYKNLNNKCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIKL 1305
Query: 1217 QRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFIF 1276
R+GHRVLLFSTMTKLLDILEEYLQWR+LVYRRIDGTT+LEDRESAIVDFN PNSDCFIF
Sbjct: 1306 HRSGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNRPNSDCFIF 1365
Query: 1277 LLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKIS 1336
LLSIRAAGRGLNLQSADTVVIYDPDPNP+NEEQAVARAHRIGQ R+VKVIYMEAVVD IS
Sbjct: 1366 LLSIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTRDVKVIYMEAVVDNIS 1425
Query: 1337 SHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRTT 1396
S+QKEDE+R GG+ D+ED+LAGKDRY+GSIESLIR+NIQQYKIDMADEVINAGRFDQRTT
Sbjct: 1426 SYQKEDELRNGGSGDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTT 1485
Query: 1397 HEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLEEMTR 1456
HEERR+TLETLLHDEER QETVHDVPSLQ+VNRMIAR EEEVELFDQMDEE DW +M +
Sbjct: 1486 HEERRMTLETLLHDEERYQETVHDVPSLQQVNRMIARTEEEVELFDQMDEEFDWTGDMMK 1545
Query: 1457 YDQVPDWIRASTREVNAAIAASSKRPSKKNALSGGNVVLDSTEIGSERRRGRPKGK-KNP 1515
++Q P W+R S+ E++A +A+ SK+P + ++ G + LD+ E E+RRGRPKG K
Sbjct: 1546 HNQAPKWLRVSSTELDAVVASLSKKPLRN--MAAGGISLDTNE-KLEKRRGRPKGSGKYS 1602
Query: 1516 SYKELED----SSEEISEDRNEDSAHDEGEIGEFEDDGYSGAGIAQPVDKDKLDDVTP-S 1570
Y+E++D S++ SE+RN S +EGEIGEFED+ + + P +KD+ ++ P +
Sbjct: 1603 IYREIDDDDFEESDDDSEERNTSSLPEEGEIGEFEDEEDNDDSV--PDNKDQSEEEEPIN 1660
Query: 1571 DAEYECPRSSSESARNNNVVEGGSSASSAGVQRLTQAVSPSVSSQKFASLSALDAKPSSI 1630
D Y+ + + E GS+ SS+G +RL +PS SS+K SLSALD++P ++
Sbjct: 1661 DEGYDFSHGMGRRKAHRS-EEAGSTGSSSGGRRLPPP-APSSSSKKLRSLSALDSRPGAL 1718
Query: 1631 SKKMVHGFILYFEYFILLPGGFYSIAFLLISSDKIYQGDELEEGEIAVSGESHMYHQQSG 1690
SK+ D+LEEGEIA+SG+SH+ QQSG
Sbjct: 1719 SKR---------------------------------TADDLEEGEIALSGDSHLDLQQSG 1745
Query: 1691 SWIHDRDEGEEEQVLQKPKIKRKRSLRVRPRHTMEKPEDKSGSEMASLQRGQSFLLP-DK 1749
SW H+RD+GE+EQV+Q PKIKRKRS+R+RPR EK +D+SG QRG D
Sbjct: 1746 SWNHERDDGEDEQVVQ-PKIKRKRSIRIRPRPNAEKLDDRSGDGTVP-QRGVHLAFQGDG 1803
Query: 1750 KYPLQSRINQESKTFGDSSSNKHDKNEPILKNKRNLPARKVANASKLHVSPKSSRLNCTS 1809
Y Q + Q F D +S + D +K KRN+P+RK A+ K+ ++ S
Sbjct: 1804 DYDSQFKSEQ---AFADPASRQQDTVHRTVKQKRNMPSRKAPPAT------KAGKMTQLS 1854
Query: 1810 APSEDNDEHSRERLKGKPNNLRGSSAHVTNMTEIIQRRCKSVISKLQRRIDKEGHQIVPL 1869
E + EHS+E K G ++ T M++ +QR+CK+VI+KL RRIDKEGHQI+P
Sbjct: 1855 GSGEGSAEHSKENWSNKVIESAGPNSSGTKMSDSMQRKCKNVINKLWRRIDKEGHQIIPN 1914
Query: 1870 LTDLWKRIENSGFAGGSGNNLLDLRKIDQRINRLEYSGVMEFVFDVQFMLKSAMQFYGYS 1929
++ W+R ENS F G ++ LDL+KI+QR++ EY GV EF+ D+Q MLKS +Q + Y
Sbjct: 1915 ISSWWRRNENSSFK-GLASSTLDLQKIEQRVDGFEYGGVNEFIADMQQMLKSVVQHFSYR 1973
Query: 1930 YEVRTEARKVHDLFFDILKTTFSDIDFGEAKSALSFTSQ---ISANAGASSKQATVFPSK 1986
+EVR EA +H+LFF+I+K F D DF EAK A+SF++ S +A S+KQ + K
Sbjct: 1974 HEVRVEAETLHNLFFNIMKIAFPDSDFREAKGAMSFSNPGGGASGSAAQSTKQ-SASGQK 2032
Query: 1987 RKRGKNDMETDPTPTQKPLQRGSTSNSESGRIKVQLPQKASRTGSGSGSAREQLQQDSPS 2046
R+ ++ E + T + Q SGR +K SR SG GS REQ DS
Sbjct: 2033 RRSSTSEAEQHGSSTSRHNQHAPV-GEVSGRAHTSKSEKDSR-HSGPGS-REQF-TDSAG 2088
Query: 2047 LLTHPGDLVVCKKKRNERGDKSSVKHRIGSAGPVSP---------PKIVVHTVLAERSPT 2097
L HP D+ + KKKR+ R S G GP+SP P +R P
Sbjct: 2089 LFRHPTDMFIVKKKRDRRPSLGSPSSS-GRTGPLSPTNAGRMGPAPSPRGARTPFQRDPH 2147
Query: 2098 PGSGSTPRAG---HAHTSNGSGGS-------VGWANPVKRMRTDSGKRRPSH 2139
P S AG H+ + GGS + WA P KR RTDSGKRRPSH
Sbjct: 2148 PSQQSMHSAGWGAHSVQQSDRGGSSSPGIGDIQWAKPTKRSRTDSGKRRPSH 2199
>gb|AAC62900.1| putative SNF2 subfamily transcriptional activator [Arabidopsis
thaliana] gi|25408956|pir||G84897 hypothetical protein
At2g46020 [imported] - Arabidopsis thaliana
Length = 1245
Score = 1485 bits (3844), Expect = 0.0
Identities = 814/1310 (62%), Positives = 966/1310 (73%), Gaps = 116/1310 (8%)
Query: 874 SVSKYYNLAHAVNEKVLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKT 933
S S+YY LAHAVNE V+RQPSML+AGTLR+YQLVGLQWMLSLYNNKLNGILADEMGLGKT
Sbjct: 7 SNSRYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKT 66
Query: 934 VQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKCAFNP----ENCI-------------D 976
VQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWK + +CI
Sbjct: 67 VQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFS 126
Query: 977 HAE*IAYMVTIGVMHFLCWIEGSSVK------IIFSTQRMKDRESVLARDLDRYRCHRRL 1030
+ + V + F+ + K II QRMKDRESVLARDLDRYRC RRL
Sbjct: 127 QVKFEKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRL 186
Query: 1031 LLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKV 1090
LLTGTPLQNDLKELWSLLNLLLP+VFDN+KAF+DWF++PFQKE P N E+DWLETEKKV
Sbjct: 187 LLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKV 246
Query: 1091 IIIHRLHQILEPFMLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPE 1150
I+IHRLHQILEPFMLRRRVE+VEGSLP KVS+VLRCRMSA QSA+YDWIK+TGTLR++P+
Sbjct: 247 IVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPD 306
Query: 1151 EEQSRMEKSPLYQAKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDFMVKCCGKLWMLD 1210
+E+ R +K+P+YQAK Y+TLNNRCMELRK CNHPLLNYP+F+D SKDF+V+ CGKLW+LD
Sbjct: 307 DEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILD 366
Query: 1211 RILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPN 1270
RILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTT+LEDRESAIVDFN P+
Sbjct: 367 RILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPD 426
Query: 1271 SDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEA 1330
+DCFIFLLSIRAAGRGLNLQ+ADTVVIYDPDPNPKNEEQAVARAHRIGQ REVKVIYMEA
Sbjct: 427 TDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEA 486
Query: 1331 VVDKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGR 1390
VV+K+SSHQKEDE+R GG++D+ED++AGKDRYIGSIE LIR+NIQQYKIDMADEVINAGR
Sbjct: 487 VVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGR 546
Query: 1391 FDQRTTHEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDW 1450
FDQRTTHEERR+TLETLLHDEER QETVHDVPSL EVNRMIAR+EEEVELFDQMDEE DW
Sbjct: 547 FDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDW 606
Query: 1451 LEEMTRYDQVPDWIRASTREVNAAIAASSKRPSKKNALSGGNVVLDSTEIGSERRRGRPK 1510
EEMT ++QVP W+RASTREVNA +A SK+PS KN LS N+++ G ER+RGRPK
Sbjct: 607 TEEMTNHEQVPKWLRASTREVNATVADLSKKPS-KNMLSSSNLIVQPGGPGGERKRGRPK 665
Query: 1511 GKKNPSYKELEDS----SEEISEDRNEDSAH-DEGEIGEFEDDGYSGAGIAQPVDKDKLD 1565
KK +YKE+ED SEE SE+RN DS + +EG+I +F+DD +GA +K + D
Sbjct: 666 SKK-INYKEIEDDIAGYSEESSEERNIDSGNEEEGDIRQFDDDELTGALGDHQTNKGEFD 724
Query: 1566 DVTPSDAEYECPRSSSESARNNNVVEGGSSASSAGVQRLTQAVSPSVSSQKFASLSALDA 1625
P Y+ P S +N + GSS SS R + SP VSSQKF SLSALD
Sbjct: 725 GENPV-CGYDYPPGSGSYKKNPPRDDAGSSGSSPESHRSKEMASP-VSSQKFGSLSALDT 782
Query: 1626 KPSSISKKMVHGFILYFEYFILLPGGFYSIAFLLISSDKIYQGDELEEGEIAVSGESHMY 1685
+P S+SK+++ D+LEEGEIA SG+SH+
Sbjct: 783 RPGSVSKRLL---------------------------------DDLEEGEIAASGDSHID 809
Query: 1686 HQQSGSWIHDRDEGEEEQVLQKPKIKRKRSLRVRPRHTMEKPEDKSGSEMASLQRGQSFL 1745
Q+SGSW HDRDEG+EEQVLQ P IKRKRS+R+RPR T E+ + GSEM + Q L
Sbjct: 810 LQRSGSWAHDRDEGDEEQVLQ-PTIKRKRSIRLRPRQTAERVD---GSEMPAAQP----L 861
Query: 1746 LPDKKYPLQSRINQESKTFGDSSSNKHDKNEPILKNKRNLPARKVANASKLHV-SPKSSR 1804
D+ Y + +T DS S++ D+++ R++PA+KVA+ SKLHV SPKS R
Sbjct: 862 QVDRSY------RSKLRTVVDSHSSRQDQSDS-SSRLRSVPAKKVASTSKLHVSSPKSGR 914
Query: 1805 LNCTSAPSEDNDEHSRERLKGKPNNLRGSSAHVTNMTEIIQRRCKSVISKLQRRIDKEGH 1864
LN T EDN E SRE G + SS M+ IIQ+RCK VISKLQRRIDKEG
Sbjct: 915 LNATQLTVEDNAEASRETWDG--TSPISSSNAGARMSHIIQKRCKIVISKLQRRIDKEGQ 972
Query: 1865 QIVPLLTDLWKRIENSGFAGGSGNNLLDLRKIDQRINRLEYSGVMEFVFDVQFMLKSAMQ 1924
QIVP+LT+LWKRI+N G+A G NNLL+LR+ID R+ RLEY+GVME DVQ ML+ AMQ
Sbjct: 973 QIVPMLTNLWKRIQN-GYAAGGVNNLLELREIDHRVERLEYAGVMELASDVQLMLRGAMQ 1031
Query: 1925 FYGYSYEVRTEARKVHDLFFDILKTTFSDIDFGEAKSALSFT-SQISANAGASSKQATVF 1983
FYG+S+EVR+EA+KVH+LFFD+LK +F D DF EA++ALSF+ S + + + + A +
Sbjct: 1032 FYGFSHEVRSEAKKVHNLFFDLLKMSFPDTDFREARNALSFSGSAPTLVSTPTPRGAGIS 1091
Query: 1984 PSKRKRGKNDMETDPTPTQKPLQRGSTSNSESGRIKVQLPQKASRTGSGSGSAREQLQQD 2043
KR++ N+ ET+P+ Q+ QR E+ RI+VQ+PQK ++ G + D
Sbjct: 1092 QGKRQKLVNEPETEPSSPQRSQQR------ENSRIRVQIPQKETKLGGTTS------HTD 1139
Query: 2044 SPSLLTHPGDLVVCKKKRNERGDKSSVKHRI-GSAGPVSPPKIVVHTVLAERSPTPGSGS 2102
+L HPG+LV+CKKKR +R +KS K R GS+ PVSPP ++ L RSP SG
Sbjct: 1140 ESPILAHPGELVICKKKRKDR-EKSGPKTRTGGSSSPVSPPPAMIGRGL--RSPV--SGG 1194
Query: 2103 TPR-------------AGHAHTSNGSGGSVGWANPVKRMRTDSGKRRPSH 2139
PR H + S +G SVGWANPVKR+RTDSGKRRPSH
Sbjct: 1195 VPRETRLAQQQRWPNQPTHPNNSGAAGDSVGWANPVKRLRTDSGKRRPSH 1244
>gb|AAC62901.1| hypothetical protein [Arabidopsis thaliana]
gi|20197206|gb|AAM14971.1| hypothetical protein
[Arabidopsis thaliana] gi|7486454|pir||T02446
hypothetical protein At2g46010 [imported] - Arabidopsis
thaliana
Length = 942
Score = 804 bits (2076), Expect = 0.0
Identities = 478/890 (53%), Positives = 593/890 (65%), Gaps = 48/890 (5%)
Query: 1 MQLPPQSRNFFALAQHGPNQGQGIE-----QQRLNPVRQAYSQYALQSFQQRPALAMQSQ 55
MQ+P QSRNFF Q Q Q QQ NP++QAY Q+A+Q+ Q+ +Q
Sbjct: 81 MQMPQQSRNFFESPQQQQQQQQQGSSTQEGQQNFNPMQQAYIQFAMQAQHQK------AQ 134
Query: 56 QQPKMEMLGPTSV-KDQEMRMGNFKLQDLMSMQAVNHGQGSSSSRNSSEHFSHGEKRVEQ 114
QQ +M M+G +SV KDQ+ RMG +QDL +SSS+ S + F+ GE++ E
Sbjct: 135 QQARMGMVGSSSVGKDQDARMGMLNMQDLNPSSQPQ----ASSSKPSGDQFARGERQTES 190
Query: 115 GQQLASDKKNEGKSSTQG-LGIGHLMPGNNIRPVQALPTQQSIPIAMNNQIATSDQLRAM 173
Q ++NE KS Q +G G LMPGN IRP+QA QQ + NNQ+A + Q +AM
Sbjct: 191 SSQ----QRNETKSHPQQQVGTGQLMPGNMIRPMQAPQAQQLVNNMGNNQLAFAQQWQAM 246
Query: 174 QAWAHERNIDLSQPANANFAAQLNLMQTRMVQQSKES----GAQSSSVPVSKQQATSPAV 229
QAWA ERNIDLS PANA+ A +++Q RM Q K +QS S+P+S Q A+S V
Sbjct: 247 QAWARERNIDLSHPANASQMA--HILQARMAAQQKAGEGNVASQSPSIPISSQPASSSVV 304
Query: 230 SSEGSAHANSSTDVSALVGSVKARQTAPPSHLGLPINAGVAGNSSDTAVQQFSLHGRDAQ 289
E S HANS++D+S GS KAR + + + A+ FS GR+
Sbjct: 305 PGENSPHANSASDISGQSGSAKARHALSTGSFASTSSPRMV----NPAMNPFSGQGRENP 360
Query: 290 GSLKQLIVGVNGMPSMHPQQSSANKSLGADSSLNAKASSSRSDPEPAKMQYVRQLSQHAS 349
+ L+ NGMPS +P Q+SAN++ D NA S E +MQ RQL+
Sbjct: 361 MYPRHLVQPTNGMPSGNPLQTSANETPVLDQ--NASTKKSLGPAEHLQMQQPRQLNTPTP 418
Query: 350 LDGGSTKEVGSGNYAKPQGGPSQMPQKLNGFTKNQLHVLKAQILAFRRLKKGDGILPQEL 409
+ N + G +Q Q+ +GFTK QLHVLKAQILAFRRLKKG+G LP EL
Sbjct: 419 NLVAPSDTGPLSNSSLQSGQGTQQAQQRSGFTKQQLHVLKAQILAFRRLKKGEGSLPPEL 478
Query: 410 LEAISPPPLDLHVQQPIHSAGAQNQDKSMGNSVTEQPRQNEPKAKDSQPIVSFDGNS-SE 468
L+AISPPPL+L Q+ I A + QD+S + +Q R E K+SQ S +G S+
Sbjct: 479 LQAISPPPLELQTQRQISPAIGKVQDRSSDKTGEDQARSLEC-GKESQAAASSNGPIFSK 537
Query: 469 QETFVRDQKSTGAEVHMQAMLPVTKVS-----AGKEDQQSAGFSAKSDKKSEHVINRAPV 523
+E V D + H Q + K + A KE+QQ+ F KSD+ ++ + P
Sbjct: 538 EEDNVGDTEVALTTGHSQLFQNLGKEATSTDVATKEEQQTDVFPVKSDQGADSSTQKNPR 597
Query: 524 INDLALDKGKAVASQALVTDTAQINKPAQSSTVVGLPKDAGPAKKYYGPLFDFPFFTRKQ 583
+D DKGKAVAS D +Q P Q+++ PKD A+KYYGPLFDFPFFTRK
Sbjct: 598 -SDSTADKGKAVAS-----DGSQSKVPPQANSPQP-PKDTASARKYYGPLFDFPFFTRKL 650
Query: 584 DSFGSSMMANNNNNLSLAYDVKELLYEEGTEVFNKRRTENLKKIEGLLAVNLERKRIRPD 643
DS+GS+ AN NNNL+LAYD+K+L+ EEG E +K+RT++LKKI GLLA NLERKRIRPD
Sbjct: 651 DSYGSAT-ANANNNLTLAYDIKDLICEEGAEFLSKKRTDSLKKINGLLAKNLERKRIRPD 709
Query: 644 LVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMPDRPYRKFVKLCERQRVELARQVQT 703
LVL+LQIEEKKLRL DLQ+R+R E+D+QQQEIM+MPDRPYRKFV+LCERQR+E+ RQV
Sbjct: 710 LVLRLQIEEKKLRLSDLQSRVREEVDRQQQEIMSMPDRPYRKFVRLCERQRLEMNRQVLA 769
Query: 704 SQKALREKQLKSIFQWRKKLLEVHWAIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKR 763
+QKA+REKQLK+IFQWRKKLLE HWAIRDARTARNRGVAKYHEKML+EFSK KDD RNKR
Sbjct: 770 NQKAVREKQLKTIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDGRNKR 829
Query: 764 MEALKNNDVDRYREMLLEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQE 823
MEALKNNDV+RYREMLLEQQT++PGDAAERY VLS+FLTQTE+YL KLG KIT+ KNQQE
Sbjct: 830 MEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTEDYLHKLGGKITATKNQQE 889
Query: 824 VEESAKAAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDGSS 873
VEE+A AAA AARLQGLSEEEVRAAA CA EEV+IRNRF EMNAPK+ SS
Sbjct: 890 VEEAANAAAVAARLQGLSEEEVRAAATCAREEVVIRNRFTEMNAPKENSS 939
>dbj|BAD11104.1| SNF2-family ATP dependent chromatin remodeling factor Snf22
[Schizosaccharomyces pombe] gi|25384985|pir||T41628
probable transcription regulator snf2 SPCC830.01c -
fission yeast (Schizosaccharomyces pombe)
gi|46397098|sp|O94421|SNF22_SCHPO SNF2-family ATP
dependent chromatin remodeling factor snf22
Length = 1680
Score = 435 bits (1118), Expect = e-120
Identities = 407/1422 (28%), Positives = 641/1422 (44%), Gaps = 270/1422 (18%)
Query: 223 QATSPAVSSEGSAHANSSTDVSALV---------GSVKARQT-----APPSH--LGLPIN 266
Q+ +P+V + S+H+ S+ ++ A V GS+ + +PPS L P N
Sbjct: 242 QSRAPSVDTTSSSHSFSARNIPANVSMQQQMGRRGSIPVNPSTFSASSPPSGSMLASPYN 301
Query: 267 AGVAGNSSDTAVQQF--SLHGRDAQGSLKQLIVGVNGMPSMHPQQSSANKSLGADSSLNA 324
G +++ A + S + S + VG G +PQ S+ + ++NA
Sbjct: 302 -GYQNDAASFAHSKLPSSANPNTPFNSTATVDVGAAGSHFPYPQPSNLD-------AINA 353
Query: 325 KASSSRSDPEPAKMQYVRQL-----------SQHASLDGGSTKEVG---------SGNYA 364
K S PA Y L S+ S+D + K S +
Sbjct: 354 KTYFQSSSNSPAPYVYRNNLPPSATSFQPSSSRSPSVDPNTVKSAQHIPRMSPSPSASAL 413
Query: 365 KPQGG-PSQMPQKLNGFTKNQLHVLKAQILAFRRLKKGDGILPQELLEAISPPPLDLHVQ 423
K Q PS + QL +LK+QI+A+ L +G +P + +AI
Sbjct: 414 KTQSHVPSAKVPPTSKLNHAQLAMLKSQIVAYNCLNSPNGQVPPAVQQAIFG-------- 465
Query: 424 QPIHSAGAQNQDKSMGNSVTEQPRQNEPKAKDSQPIVSFDGNSSEQETFVRDQKSTGAEV 483
GA N+ S + +QN P+ +S +++T RD ++
Sbjct: 466 ---RVYGASNEV-----SPSMPFQQNVPQM-----------SSVKKDTPTRDANMRTSKA 506
Query: 484 HMQAMLPVTKVSAGKEDQQSAGFSAKSDKKSEHVINRAPVINDLALDKGKAVASQALVTD 543
+P Q +SA K+E + P ++ + L + T
Sbjct: 507 PYIQNIP--------NQFQRRAYSATIPVKNESLAK--PSVSPMPLQQS---------TG 547
Query: 544 TAQINKPAQSSTVVGLPKDAGPAKKYYGPLFDFPFFTRKQDSFGSSMMANNNNNLSLAYD 603
++ K AQ T V P P+ F + + S S++ S+++D
Sbjct: 548 KTEVAKRAQFPTNVNYSSCVDPRTYVKTPIPFSKFSSSENLSLIPSLLPP-----SISWD 602
Query: 604 VKELLYEEGTEVFNKRRTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQAR 663
L E R + L+K +VN K+I K IE + LRLL+ Q
Sbjct: 603 DVFLSSEIAIACSIANRIDFLEKENRPKSVN---KKILQQDKSKSMIELRCLRLLEKQRS 659
Query: 664 LRGEIDQQQQEIMAMPDRPYRKFVKLCERQRVELARQV------QTSQKALREKQ----- 712
LR I+ ++ R + +RQ ++ A V Q ++ A+R+K+
Sbjct: 660 LRETINSVIPHSDSLAAGNLRLMFRNVKRQTMQEANLVLALAEKQKTEHAMRQKEKLLTH 719
Query: 713 LKSIFQWRKKLLEVHWAIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDV 772
L+SI RK ++ A+T R + + +H + KE K + +R++AL+ +D
Sbjct: 720 LRSIMLHRKSIVTKVDKQNKAKTQRCKDIINFHAHLEKEEKKRIERSARQRLQALRADDE 779
Query: 773 DRYREMLLEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKIT-SAKNQQEVEESAKAA 831
Y ++L D A+ + + L QT++YL+ L + N S K +
Sbjct: 780 AAYLQLL---------DKAKDTRI-THLLKQTDQYLENLTRAVRIQQSNIHSGNTSGKGS 829
Query: 832 AAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDGSSSVSKYYNLAHAVNEKVLR 891
+A E+ AP Y+ +AH ++E+V
Sbjct: 830 NSA-----------------------------ELEAPISEEDKNLDYFKVAHRIHEEV-E 859
Query: 892 QPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYG 951
QP + GTL++YQL GL+WMLSLYNN LNGILADEMGLGKT+Q +A I YL+E K G
Sbjct: 860 QPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQG 919
Query: 952 PHLIIVPNAVLVNWKCAFNPENCIDHAE*IAYMVTIGVMHFL-CWIEGSSVKIIFST--- 1007
P LIIVP + L NW F E + IAY + L I S+ ++ +T
Sbjct: 920 PFLIIVPLSTLTNWIMEF--EKWAPSVKKIAYKGPPQLRKTLQSQIRSSNFNVLLTTFEY 977
Query: 1008 ---------------------QRMKDRESVLARDLDR-YRCHRRLLLTGTPLQNDLKELW 1045
R+K+ +S L L Y RL+LTGTPLQN+L ELW
Sbjct: 978 IIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELW 1037
Query: 1046 SLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPFML 1105
+LLN +LP++F++ K+F++WF+ PF + L E+ ++II RLH++L PF+
Sbjct: 1038 ALLNFVLPKIFNSIKSFDEWFNTPFAN---TGGQDKIGLNEEEALLIIKRLHKVLRPFLF 1094
Query: 1106 RRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQAK 1165
RR ++VE LP KV V++C +S Q +Y +K G L ++ E+ ++ +
Sbjct: 1095 RRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGI--------- 1145
Query: 1166 QYKTLNNRCMELRKTCNHPLLNYPFFSDLSK---------DFMVKCCGKLWMLDRILIKL 1216
K L N M+L+K CNHP + F D+ + D + + GK +LDRIL KL
Sbjct: 1146 --KGLQNTVMQLKKICNHPFI----FEDVERAIDPSGTNVDLLWRAAGKFELLDRILPKL 1199
Query: 1217 QRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFIF 1276
TGH+ L+F MT+++ I+E+YL+ + Y R+DG+T +DR S + FN P SD +IF
Sbjct: 1200 FLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIF 1259
Query: 1277 LLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKIS 1336
+LS RA G GLNLQ+ADTV+I+D D NP + QA RAHRIGQ +EV+++ + + +K
Sbjct: 1260 MLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRL--ITEK-- 1315
Query: 1337 SHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRTT 1396
SIE I S QYK+D+ +VI AG+FD ++T
Sbjct: 1316 ----------------------------SIEENILSR-AQYKLDLDGKVIQAGKFDNKST 1346
Query: 1397 HEERRLTLETLL-HDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEE------- 1448
EER L +LL HD + + + E+N +I+R +EE+ LF ++D+E
Sbjct: 1347 PEEREAFLRSLLEHDGDDDHDLTYGELQDDELNELISRTDEELVLFKKLDKERAATDIYG 1406
Query: 1449 --DWLEEMTRYDQVPDWIRASTREVNAAIAASS---------KRPSKKNALSGGNVVLDS 1497
LE + +++PD+ + EV++ SS ++ ++N++S + LD
Sbjct: 1407 KGKPLERLLTVNELPDFYKV---EVDSFAVQSSSELEDQYLERKRRRRNSISYTELTLDE 1463
Query: 1498 TEIGSE-------RRRGRPKGKKNPSYKELEDSSEEISEDRN 1532
+ R+RGRP+ K N S+E S R+
Sbjct: 1464 LNTVDDPSSTLMPRKRGRPRKKTNSGSSLSTPLSQESSLARS 1505
>ref|XP_624270.1| PREDICTED: similar to ENSANGP00000013716 [Apis mellifera]
Length = 1280
Score = 427 bits (1099), Expect = e-117
Identities = 317/986 (32%), Positives = 466/986 (47%), Gaps = 196/986 (19%)
Query: 622 ENLKKIEGLLAVNLERKRIRP-----DLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIM 676
E ++ +A+ +E+ P DL ++ QIE + LR+L+ Q +LR EI ++
Sbjct: 102 ERENRVAARIALRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEILACTRKDT 161
Query: 677 AMPDRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLE 725
+ K K +RQ + AR +++ QK E++ L S+ Q K E
Sbjct: 162 TLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKE 221
Query: 726 VHWAIRDARTAR-NRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQT 784
H A+ AR N+ V YH +E K ++ +RM L D + YR+++ +++
Sbjct: 222 FH-RNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKD 280
Query: 785 SLPGDAAERYNVLSTFLTQTEEYLQ---------KLGSKITSAKNQQEVEESAKAAAAAA 835
L+ L+QT+EY+ K+ K + Q+ ++ K
Sbjct: 281 KR----------LAFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKKKKKLQDGEG 330
Query: 836 RLQGLSEEEVRAAA-------ACAGEEVMIRNRFM------------------------E 864
+G + E+ R GEE + ++ E
Sbjct: 331 GEEGNANEDTRVGVIETATGRTLTGEEAPLMSQLSTFLESHPGWEPIESESEEDEDEEEE 390
Query: 865 MNAPKDGSSSVSK------------------------------YYNLAHAVNEKVLRQPS 894
N ++ S + K YY++AH V+E V Q S
Sbjct: 391 ENEGEEKSENKEKCTGDSEEEKVKKTIHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQAS 450
Query: 895 MLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHL 954
++ G L+EYQ+ GL+W++SL+NN LNGILADEMGLGKT+Q +AL+ YLME K GP L
Sbjct: 451 IMVNGKLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFL 510
Query: 955 IIVPNAVLVNWKCAFN---PENCI--------------DHAE*IAYMVTIGVMHFLCWIE 997
IIVP + L NW F P + + V + ++ +
Sbjct: 511 IIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYVIKDK 570
Query: 998 GSSVK------IIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKELWSLLNL 1050
G K II RMK+ L + L+ Y RLLLTGTPLQN L ELW+LLN
Sbjct: 571 GVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNF 630
Query: 1051 LLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPFMLRRRVE 1110
LLP +F + F WF+ PF E L E+ ++II RLH++L PF+LRR +
Sbjct: 631 LLPSIFKSCSTFEQWFNAPFAT-----TGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 685
Query: 1111 EVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQAKQYKTL 1170
EVE LP KV +++C MS Q +Y ++S G L L E+ + K K L
Sbjct: 686 EVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVL-LTDGSEKGKQGKGGA------KAL 738
Query: 1171 NNRCMELRKTCNHPLLNYPFFSDLSKDF----------------MVKCCGKLWMLDRILI 1214
N ++LRK CNHP + F + + + + + GK +LDRIL
Sbjct: 739 MNTIVQLRKLCNHPFM----FQAIEEKYCEHVGTQGSGVITGPDLYRASGKFELLDRILP 794
Query: 1215 KLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCF 1274
KL+ T HRVLLF MT+L+ I+E+YL WR +Y R+DGTT EDR + FN P S+ F
Sbjct: 795 KLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYF 854
Query: 1275 IFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDK 1334
+FLLS RA G GLNLQ+ADTV+I+D D NP + QA RAHRIGQK EV+V+ + V
Sbjct: 855 LFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTV--- 911
Query: 1335 ISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQR 1394
S+E I + +YK++M ++VI AG FDQ+
Sbjct: 912 -----------------------------NSVEERILA-AARYKLNMDEKVIQAGMFDQK 941
Query: 1395 TTHEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE-- 1452
+T ER+ L+++LH ++ E ++VP + VN+MIAR E E E+F ++D E E
Sbjct: 942 STGSERQQFLQSILHQDDAEDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAK 1001
Query: 1453 -------EMTRYDQVPDWIRASTREV 1471
+ ++PDW+ EV
Sbjct: 1002 LGPNRKSRLLEEAELPDWLVKDDDEV 1027
>ref|NP_001004446.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 2 [Rattus norvegicus]
gi|49616741|gb|AAT67217.1| SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a2 [Rattus norvegicus]
Length = 1597
Score = 423 bits (1087), Expect = e-116
Identities = 391/1359 (28%), Positives = 597/1359 (43%), Gaps = 238/1359 (17%)
Query: 301 GMPSMHPQQSSANKSLGADSSLNAKASSSRSDPEPAKMQYVRQLSQHASLDGGSTKEVGS 360
G S HP LGA +++ S P P +M SQ +L G + +
Sbjct: 119 GYMSPHPSP------LGAPEHVSSPISGG--GPTPPQMPP----SQPGTLIPGDLQAMN- 165
Query: 361 GNYAKPQGGPSQMPQKLNGFTKNQLHVLKAQILAFRRLKKGDGILPQELLEAISP----P 416
+P GPS F+ QLH L+AQILA++ L +G LP+ L A+ P
Sbjct: 166 ----QPDRGPSP-------FSPVQLHQLRAQILAYKMLARGQP-LPETLQLAVQGKRTLP 213
Query: 417 PLDLHVQQPIHSAGAQNQDKSMGNSVTEQPRQNEPKAKDSQP-----IVSFDGNSSEQET 471
+ QQ Q Q + +Q Q +P+ + Q +VS++ S +
Sbjct: 214 GIQQQQQQQQQQQQQQQQQQPQQPQQPQQQTQAQPQQQQQQQQQPPTLVSYNRPSGPGQE 273
Query: 472 FVRDQKSTGAEVHMQA------------MLPVTKVSAGKEDQQSAGFSAKSDKKSEHVIN 519
+ ++T ++ A P G Q+ A + + +
Sbjct: 274 LLMTAQNTQRKLSAPAPSGRPSPAPPAATQPTATAVPGPSVQEPAPGQPSPVLQLQQKQS 333
Query: 520 R-APVINDLALDKGKAVASQALVTDTAQINKPAQSSTVVG-LPKDAGPAKKYYGPLFDFP 577
R +P+ LD + + + ++ + ++ G LP D
Sbjct: 334 RISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLL 393
Query: 578 FFTRKQDSFGSSMMANNNNNLSLAYDVKELLYEEGTEVFNKRRTENLKKIEGLLAVNLER 637
F R+ + M + L A + K + + R TE L+K + + ER
Sbjct: 394 NFQRQLRQEVVACM-RRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQ---KIEQER 449
Query: 638 KRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIM---AMPDRPYRKFVKLCERQR 694
KR + I + + + G+I + + + A +R +K + E++R
Sbjct: 450 KRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKER 509
Query: 695 VE--LARQVQTSQKALREKQ-------LKSIFQWRKKLLEVHWAIRDARTARNRGVAKYH 745
+ +A + +K + +K+ L+ ++ L + W + A+ A+ + +
Sbjct: 510 MRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRR 569
Query: 746 EKMLKEFSKNKDD---------DRNKRM-------------------EALKNNDVDRYRE 777
K +E ++ + D + +M EA K + +D + E
Sbjct: 570 RKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLE 629
Query: 778 MLLEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARL 837
M + + D+ E + + E Q+ KI N +EV
Sbjct: 630 MNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSKEV------------- 676
Query: 838 QGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDGSSSVSKYYNLAHAVNEKVLRQPSMLR 897
SE++ R A ++V + M GS S YY +AHA++E+V +Q ++L
Sbjct: 677 ---SEKDARQIIETAKQDV---DDEYSMQYSARGSQS---YYTVAHAISERVEKQSALLI 727
Query: 898 AGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 957
GTL+ YQL GL+WM+SLYNN LNGILADEMG GKT+Q +ALI YLME KG GP+LIIV
Sbjct: 728 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITYLMEHKGLNGPYLIIV 787
Query: 958 PNAVLVNWKCAFNPENCIDHAE*IAYMVT--------------------------IGVMH 991
P + L NW F + A I+Y T I H
Sbjct: 788 PLSTLSNWTYEF--DKWAPSAVKISYKGTPAMRRSLVPQLRSGKFNALLTTYEYIIKDKH 845
Query: 992 FLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKELWSLLNL 1050
L I + I+ RMK+ L + L+ Y RR+LLTGTPLQN L ELW+LLN
Sbjct: 846 ILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNF 904
Query: 1051 LLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPFMLRRRVE 1110
LLP +F + F WF+ PF E L E+ ++II RLH++L PF+LRR +
Sbjct: 905 LLPTIFKSCSTFEQWFNAPFA-----MTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 959
Query: 1111 EVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQAKQYKTL 1170
EVE LP KV V++C MSA Q +Y +++ G L + E+ + + KTL
Sbjct: 960 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGA-------KTL 1012
Query: 1171 NNRCMELRKTCNHPLLNYPFFSDLSKDF---------------MVKCCGKLWMLDRILIK 1215
N M+LRK CNHP + F + + F + + GK +LDRIL K
Sbjct: 1013 MNTIMQLRKICNHPYM----FQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1068
Query: 1216 LQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFI 1275
L+ T HRVLLF MT L+ I+E+Y +R +Y R+DGTT EDR + + FN P S FI
Sbjct: 1069 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1128
Query: 1276 FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKI 1335
FLLS RA G GLNLQ+ADTVVI+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1129 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV---- 1184
Query: 1336 SSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRT 1395
S+E I + +YK+++ +VI AG FDQ++
Sbjct: 1185 ----------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFDQKS 1215
Query: 1396 THEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMD---EEEDWLE 1452
+ ERR L+ +L EE +E +VP + +N+MIAR EEE +LF +MD ED
Sbjct: 1216 SSHERRAFLQAILEHEEENEEE-DEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARN 1274
Query: 1453 -----EMTRYDQVPDWIRASTREVNAAIAASSK-----RPSKK----------------N 1486
+ D++P WI EV + R S++
Sbjct: 1275 PKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLR 1334
Query: 1487 ALSGGNVVLDSTEIGSERRRGRPKGKKNPSYKELEDSSE 1525
A+ GN+ E+ ++R+ R K+P +++E + +
Sbjct: 1335 AIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKK 1373
>gb|AAK39219.1| Hypothetical protein C52B9.8 [Caenorhabditis elegans]
gi|17551114|ref|NP_508736.1| brahma (XE918)
[Caenorhabditis elegans]
Length = 1336
Score = 419 bits (1077), Expect = e-115
Identities = 368/1325 (27%), Positives = 598/1325 (44%), Gaps = 207/1325 (15%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R +++K E L NL + K +IE L LLD Q LR ++ + +P
Sbjct: 95 RDQDMKNREMYLKENLHT--FPEERQTKAKIEYLGLSLLDFQTELRKKV---LATTVLVP 149
Query: 680 DRPYRKFVKLCERQRVELARQVQTS-QKALREKQ--------LKSIFQWRKKLLEVHWAI 730
+ R + E ++++ +A+ EK+ L+S+ + ++ E H
Sbjct: 150 PNDFLINPWSIRRTKYEYLQELKRHPDRAILEKRRKVTNFHFLQSLTKHAREFKEFHKRN 209
Query: 731 RDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPGDA 790
T + + +Y K ++ + + R++ L D + YR ML E++
Sbjct: 210 MLNHTKVRKSMQQYITNENKRIAREEMKNEKNRIQKLIQEDEEGYRAMLDEKKDQR---- 265
Query: 791 AERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQ--GLSEEEVRAA 848
L L QT++Y++ L + K QQ + A + R + G++EE+
Sbjct: 266 ------LVYLLEQTDDYIKSLCDLL---KQQQNATAGSLATKSYIRKEYDGVAEED---- 312
Query: 849 AACAGEEVMIRNRFMEMNAPKDGSSSVSKYYNLAHAVNEKVLRQPSMLRAGT----LREY 904
+ ++ + R + ++ YY AH V E++ Q M+ G L+ Y
Sbjct: 313 ---KVKSILDKARNDDDEYENKTKMNIEDYYTTAHGVREEIKEQHFMMGGGNPSLKLKPY 369
Query: 905 QLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVN 964
Q+ GL+WM+SL+NN LNGILADEMGLGKT+Q +A I YLME K GP L+IVP + + N
Sbjct: 370 QIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPN 429
Query: 965 WKCAFNPENCIDHAE*IAY------------MVTIGVMHFLCWIEGSSVK---------- 1002
W+ F+ H IAY ++ G + L ++
Sbjct: 430 WQNEFDKWAANVHL--IAYKGPKETRKVFEPIIKSGKFNVLLTTFEYVIREKALLGKLRW 487
Query: 1003 ---IIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKELWSLLNLLLPEVFDN 1058
II R+K++ L L+ R++C RRLL+TGTPLQN L ELW+LLN LLP +F +
Sbjct: 488 KYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPSIFSS 547
Query: 1059 KKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPFMLRRRVEEVEGSLPP 1118
F WF+ PF E L E+ ++II RLH++L PF+LRR +EVE LP
Sbjct: 548 CSTFEQWFNAPFA-----TTGEKVELTQEETMLIIRRLHKVLRPFLLRRLKKEVESELPD 602
Query: 1119 KVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQAKQ---YKTLNNRCM 1175
K+ V+RC MSA Q +Y M+K L K K+L N +
Sbjct: 603 KMEFVVRCDMSALQKVLY-----------------KHMQKGLLLDGKTNTGSKSLRNTMI 645
Query: 1176 ELRKTCNHPLL---------NYPFFSDLSKDFMVKCCGKLWMLDRILIKLQRTGHRVLLF 1226
LRK CNHP L N+ +S + + GKL +L RIL KLQ TGHRVL+F
Sbjct: 646 HLRKLCNHPFLFENVEESCRNFWDARFISAVDLYRVSGKLELLSRILPKLQATGHRVLMF 705
Query: 1227 STMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFIFLLSIRAAGRG 1286
MT ++ I+E++L + Y R+DG+T ++R + + FN+PNS+ F+F+LS RA G G
Sbjct: 706 FQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLG 765
Query: 1287 LNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDEMRI 1346
LNLQ+ADTV+I+D D NP + QA RAHRIGQK EV+V + I+++ E+++
Sbjct: 766 LNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRL------ITANSVEEKILA 819
Query: 1347 GGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRTTHEERRLTLET 1406
+YK+++ ++VI AG+FD R+T ERR LE
Sbjct: 820 AA---------------------------RYKLNVDEKVIQAGKFDNRSTGAERREILEN 852
Query: 1407 LLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLEE-------MTRYDQ 1459
++ E +E +VP+ +++N +++R+EEE ELF +MD+E E+ + D+
Sbjct: 853 IIKTENESEED-EEVPNDEDINDILSRSEEEFELFQKMDQERFENEQAQKAKPRLVGEDE 911
Query: 1460 VPDWIRASTREVNAAIAASSKRPSKKNALSGGNVVLDSTEIGSERRRGRPKGKKNPSYKE 1519
+P R++ + A+ + + A G V GS R R +E
Sbjct: 912 IP-------RDI---LRAADETDYIEKAKEEGRVPYLEVMPGSRRTR-----------RE 950
Query: 1520 LEDSSEEISEDRNEDSAHDEGEIGEFEDD--------GYSGAGIAQPVDKD-----KLDD 1566
++ S++ +S+D+ + DE + + G S I+ D K+DD
Sbjct: 951 VDYSADTMSDDKFLEKLFDEDDTTSARTEEEPNPAQPGPSSVSISLESSCDTQKDIKVDD 1010
Query: 1567 VTPSDAEYECPR-----SSSESARNNNVVEGGSSASSAGVQRLTQAVSPSVSSQKFASLS 1621
V ++ PR E R +N E S +S ++ + +K
Sbjct: 1011 VPAPPLTFKVPRLTIKLGGDEKKRKHNRSESDSDDNSLKKEKKHRKEDHPKEKEKEKKKE 1070
Query: 1622 ALDAKPSSISKKMVHGFILYFEYFILLPGGFYSIAFLLISSDKIYQGDELEEGEIAVSGE 1681
K + K + E + G S + I+ + + + ++G
Sbjct: 1071 KEQEKSTDSEKDLKRKIEAPIEKIRIKFSGEPSEKYRKINEEP-PKKEHRDKG------- 1122
Query: 1682 SHMYHQQSGSWIHDRDEGEEEQVLQKPKIKRKRSLRVRPRHTMEKPEDKSGSEMASLQRG 1741
++ S H D+ + PK K+ R +K + S S + L+ G
Sbjct: 1123 ----RKEEKSHKHRSDDDD-----SSPKKKKHRDSDESSEKKKKKHKHDSDSAL-KLREG 1172
Query: 1742 QSFLLPDKKYPLQSRINQESKTFGDSSSNKHDKNEPILKNKR----NLPARKVANASKLH 1797
+ +K P++ RI Q + S + DKN P +K K N+P+++ + K
Sbjct: 1173 SPLSVDKEKSPMKIRIGQGQPSI--SLAANEDKNHPPIKLKLNVKFNMPSQETDGSKKDK 1230
Query: 1798 VSPKSSRLNCTSAPSEDNDEHSRERLKGKPNNLRGSSAHVTNMTEIIQRRCKSVISKLQR 1857
P + E++ +E+ K K + + TE +RR + +L+R
Sbjct: 1231 KEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSREDETE-EERRARKEAKRLKR 1289
Query: 1858 RIDKE 1862
+ +++
Sbjct: 1290 QKEEQ 1294
>gb|AAS53055.1| AER375Cp [Ashbya gossypii ATCC 10895] gi|45190977|ref|NP_985231.1|
AER375Cp [Eremothecium gossypii]
Length = 1288
Score = 419 bits (1077), Expect = e-115
Identities = 289/868 (33%), Positives = 427/868 (48%), Gaps = 153/868 (17%)
Query: 643 DLVLKLQIEEKKLRLLDLQARLRGEI-----DQQQQEIMAMPDRPYRKF--------VKL 689
+L +K +E K L+LL Q LR ++ Q Q I + D Y +K+
Sbjct: 223 NLKIKALVELKALKLLTKQKSLRQKLISNVTSQSHQTIPYLRDSQYTMAAQRSINVRMKV 282
Query: 690 CERQRVELARQVQTSQ---KALREK--------QLKSIFQWRKKLLEVHWAIRDARTARN 738
Q LA +++ Q K RE+ Q+ Q R++ H R+
Sbjct: 283 IVPQTARLAEELERQQLLEKRKRERNLHRQKVSQIVEFIQQRQQDFSSH---RERAAQFG 339
Query: 739 RGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPGDAAERYNVLS 798
R A H +M KE + + +R+ ALK+ND + Y ++L + + + ++
Sbjct: 340 RICATLHSQMEKEEQRRIERTAKQRLAALKSNDEEAYLKLLDQTKDTR----------IT 389
Query: 799 TFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQGLSEEEVRAAAACAGEEVMI 858
L QT +L L + +N+ ++ GEE+
Sbjct: 390 HLLKQTNSFLDSLAQAVRVQQNEAKLRR--------------------------GEEIP- 422
Query: 859 RNRFMEMNAPKDGSSSVSKYYNLAHAVNEKVLRQPSMLRAGTLREYQLVGLQWMLSLYNN 918
D YY +AH + EKV +QPS+L GTL+EYQ+ GL+WM+SLYNN
Sbjct: 423 --------PVTDEEREKIDYYEVAHRIKEKVEKQPSILVGGTLKEYQIRGLEWMVSLYNN 474
Query: 919 KLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKCAFNP------- 971
LNGILADEMGLGKT+Q ++LI YL E K + GP L+IVP + + NW F
Sbjct: 475 HLNGILADEMGLGKTIQSISLITYLYEVKKDSGPFLVIVPLSTITNWTLEFEKWAPSLTT 534
Query: 972 ---ENCIDHAE*IAYMVTIGVMHFLCWIEGSSVK-------------IIFSTQRMKDRES 1015
+ + + + V IG L +K II RMK+ +S
Sbjct: 535 VIYKGTPNQRRSLQHQVRIGDFDVLLTTYEYIIKDRSLLAKHEWSHMIIDEGHRMKNAQS 594
Query: 1016 VLARDLDRY-RCHRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKED 1074
L+ L Y + RL+LTGTPLQN+L ELW+LLN +LP++F++ K F++WF+ PF
Sbjct: 595 KLSYTLTHYYKTRHRLILTGTPLQNNLPELWALLNFVLPKIFNSSKTFDEWFNTPFSNTG 654
Query: 1075 PNQNAENDWLETEKKVIIIHRLHQILEPFMLRRRVEEVEGSLPPKVSIVLRCRMSAFQSA 1134
+ E L E+ +++I RLH++L PF+LRR +EVE LP KV V++C++S Q
Sbjct: 655 GQEKLE---LTEEEALLVIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVVKCKLSGLQHQ 711
Query: 1135 IYDWIKSTGTLRLNPEEEQSRMEKSPLYQAKQYKTLNNRCMELRKTCNHPLLNYPFFSDL 1194
+Y + L + E + K LNN+ M+LRK CNHP + F ++
Sbjct: 712 LYQQMLKHNALFVGAGTEGATKGG--------IKGLNNKIMQLRKICNHPFV----FDEV 759
Query: 1195 ---------SKDFMVKCCGKLWMLDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRL 1245
+ + + GK +LDR+L K + TGHRVL+F MT+++DI+E++LQ + L
Sbjct: 760 EGVVNPTRTNSSLLYRVSGKFELLDRVLPKFKATGHRVLMFFQMTQVMDIMEDFLQMKNL 819
Query: 1246 VYRRIDGTTALEDRESAIVDFNSPNSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPK 1305
Y R+DG T E+R + FN+P+SD F FLLS RA G GLNLQ+ADTV+I+D D NP
Sbjct: 820 KYMRLDGATKAEERTGMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 879
Query: 1306 NEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDEMRIGGTIDMEDELAGKDRYIGS 1365
+ QA RAHRIGQK EV+++ + S
Sbjct: 880 QDLQAQDRAHRIGQKNEVRILRLITT--------------------------------DS 907
Query: 1366 IESLIRSNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERCQETVHDVPSLQ 1425
+E +I Q K+D+ +VI AG+FD ++T EE+ L LL E +
Sbjct: 908 VEEVILERAMQ-KLDIDGKVIQAGKFDNKSTAEEQEAFLRRLLESESNKDDDDQAELDDV 966
Query: 1426 EVNRMIARNEEEVELFDQMDEEEDWLEE 1453
E+N ++ARNE E ELFD++D E E+
Sbjct: 967 ELNEILARNEAEKELFDKIDRERVMREQ 994
>gb|AAC60670.1| homeotic gene regulator [Mus sp.] gi|2143481|pir||I53078 homeotic
gene regulator - mouse (fragment)
Length = 1022
Score = 404 bits (1037), Expect = e-110
Identities = 275/747 (36%), Positives = 381/747 (50%), Gaps = 102/747 (13%)
Query: 780 LEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQG 839
+E L G A + L +L Y S + +++E EE + A+
Sbjct: 30 VESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPT 89
Query: 840 LSEEEVRAAAACAGEEVM-IRNRFMEMNAPKDGSSS----------VSKYYNLAHAVNEK 888
L EE + ++V + R + NA +D + YY +AHAV E+
Sbjct: 90 LPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTER 149
Query: 889 VLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 948
V +Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K
Sbjct: 150 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 209
Query: 949 NYGPHLIIVPNAVLVNW----------------------KCAFNPENCIDHAE*I--AYM 984
GP LIIVP + L NW + AF P+ + Y
Sbjct: 210 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYE 269
Query: 985 VTIGVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKE 1043
I H L I + I+ RMK+ L + L+ Y RRLLLTGTPLQN L E
Sbjct: 270 YIIKDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPE 328
Query: 1044 LWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPF 1103
LW+LLN LLP +F + F WF+ PF E L E+ ++II RLH++L PF
Sbjct: 329 LWALLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEETILIIRRLHKVLRPF 383
Query: 1104 MLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQ 1163
+LRR +EVE LP KV V++C MSA Q +Y +++ G L + E+ + +
Sbjct: 384 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT--- 440
Query: 1164 AKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF-----------MVKCCGKLWMLDRI 1212
KTL N M+LRK CNHP + S+ + + GK +LDRI
Sbjct: 441 ----KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI 496
Query: 1213 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSD 1272
L KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN P S+
Sbjct: 497 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 556
Query: 1273 CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVV 1332
FIFLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 557 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV- 615
Query: 1333 DKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFD 1392
S+E I + +YK+++ +VI AG FD
Sbjct: 616 -------------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFD 643
Query: 1393 QRTTHEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE 1452
Q+++ ERR L+ +L EE+ +E +VP + VN+MIAR+EEE +LF +MD + E
Sbjct: 644 QKSSSHERRAFLQAILEHEEQDEEE-DEVPDDETVNQMIARHEEEFDLFMRMDLDRRREE 702
Query: 1453 --------EMTRYDQVPDWIRASTREV 1471
+ D++P WI EV
Sbjct: 703 ARNPKRKPRLMEEDELPSWIIKDDAEV 729
>gb|AAH79560.1| Smarca4 protein [Mus musculus]
Length = 1614
Score = 404 bits (1037), Expect = e-110
Identities = 275/747 (36%), Positives = 381/747 (50%), Gaps = 102/747 (13%)
Query: 780 LEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQG 839
+E L G A + L +L Y S + +++E EE + A+
Sbjct: 622 VESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPT 681
Query: 840 LSEEEVRAAAACAGEEVM-IRNRFMEMNAPKDGSSS----------VSKYYNLAHAVNEK 888
L EE + ++V + R + NA +D + YY +AHAV E+
Sbjct: 682 LPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTER 741
Query: 889 VLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 948
V +Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K
Sbjct: 742 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 801
Query: 949 NYGPHLIIVPNAVLVNW----------------------KCAFNPENCIDHAE*I--AYM 984
GP LIIVP + L NW + AF P+ + Y
Sbjct: 802 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYE 861
Query: 985 VTIGVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKE 1043
I H L I + I+ RMK+ L + L+ Y RRLLLTGTPLQN L E
Sbjct: 862 YIIKDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPE 920
Query: 1044 LWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPF 1103
LW+LLN LLP +F + F WF+ PF E L E+ ++II RLH++L PF
Sbjct: 921 LWALLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 1104 MLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQ 1163
+LRR +EVE LP KV V++C MSA Q +Y +++ G L + E+ + +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT--- 1032
Query: 1164 AKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF-----------MVKCCGKLWMLDRI 1212
KTL N M+LRK CNHP + S+ + + GK +LDRI
Sbjct: 1033 ----KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088
Query: 1213 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSD 1272
L KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN P S+
Sbjct: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148
Query: 1273 CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVV 1332
FIFLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV- 1207
Query: 1333 DKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFD 1392
S+E I + +YK+++ +VI AG FD
Sbjct: 1208 -------------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFD 1235
Query: 1393 QRTTHEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE 1452
Q+++ ERR L+ +L EE+ +E +VP + VN+MIAR+EEE +LF +MD + E
Sbjct: 1236 QKSSSHERRAFLQAILEHEEQDEEE-DEVPDDETVNQMIARHEEEFDLFMRMDLDRRREE 1294
Query: 1453 --------EMTRYDQVPDWIRASTREV 1471
+ D++P WI EV
Sbjct: 1295 ARNPKRKPRLMEEDELPSWIIKDDAEV 1321
Score = 62.0 bits (149), Expect = 2e-07
Identities = 59/221 (26%), Positives = 93/221 (41%), Gaps = 30/221 (13%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R + L+ + G LA DL K IE K LRLL+ Q +LR E+ + A+
Sbjct: 381 RIQELENLPGSLA---------GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALE 431
Query: 680 DRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLEVHW 728
K K +RQ + AR +++ QK +E++ L SI Q K E H
Sbjct: 432 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHR 491
Query: 729 AIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPG 788
++ + VA YH +E K + +RM L D + YR+++ +++
Sbjct: 492 SVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR-- 549
Query: 789 DAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAK 829
L+ L QT+EY+ L + K Q +E K
Sbjct: 550 --------LAYLLQQTDEYVANLTELVRQHKAAQVAKEKKK 582
Score = 39.3 bits (90), Expect = 1.5
Identities = 39/142 (27%), Positives = 54/142 (37%), Gaps = 32/142 (22%)
Query: 300 NGMPSMH-PQQSSANKSLGADSSLNA-KASSSRSDPEPAKMQYVRQLSQHASLDGGSTKE 357
+ M MH P +S K + D N K RS + QH+ G
Sbjct: 67 DNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMAPPPSPMDQHSQ---GYPSP 123
Query: 358 VGSGNYAK---PQGGPSQMPQKLNG-----------------------FTKNQLHVLKAQ 391
+G +A P GPS PQ +G F +NQLH L+AQ
Sbjct: 124 LGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 392 ILAFRRLKKGDGILPQELLEAI 413
I+A++ L +G LP L A+
Sbjct: 184 IMAYKMLARGQP-LPDHLQMAV 204
>gb|AAH60229.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 4 [Mus musculus]
gi|39930329|ref|NP_035547.1| SWI/SNF related, matrix
associated, actin dependent regulator of chromatin,
subfamily a, member 4 [Mus musculus]
Length = 1348
Score = 404 bits (1037), Expect = e-110
Identities = 275/747 (36%), Positives = 381/747 (50%), Gaps = 102/747 (13%)
Query: 780 LEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQG 839
+E L G A + L +L Y S + +++E EE + A+
Sbjct: 622 VESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPT 681
Query: 840 LSEEEVRAAAACAGEEVM-IRNRFMEMNAPKDGSSS----------VSKYYNLAHAVNEK 888
L EE + ++V + R + NA +D + YY +AHAV E+
Sbjct: 682 LPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTER 741
Query: 889 VLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 948
V +Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K
Sbjct: 742 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 801
Query: 949 NYGPHLIIVPNAVLVNW----------------------KCAFNPENCIDHAE*I--AYM 984
GP LIIVP + L NW + AF P+ + Y
Sbjct: 802 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYE 861
Query: 985 VTIGVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKE 1043
I H L I + I+ RMK+ L + L+ Y RRLLLTGTPLQN L E
Sbjct: 862 YIIKDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPE 920
Query: 1044 LWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPF 1103
LW+LLN LLP +F + F WF+ PF E L E+ ++II RLH++L PF
Sbjct: 921 LWALLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 1104 MLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQ 1163
+LRR +EVE LP KV V++C MSA Q +Y +++ G L + E+ + +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT--- 1032
Query: 1164 AKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF-----------MVKCCGKLWMLDRI 1212
KTL N M+LRK CNHP + S+ + + GK +LDRI
Sbjct: 1033 ----KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088
Query: 1213 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSD 1272
L KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN P S+
Sbjct: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148
Query: 1273 CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVV 1332
FIFLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV- 1207
Query: 1333 DKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFD 1392
S+E I + +YK+++ +VI AG FD
Sbjct: 1208 -------------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFD 1235
Query: 1393 QRTTHEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE 1452
Q+++ ERR L+ +L EE+ +E +VP + VN+MIAR+EEE +LF +MD + E
Sbjct: 1236 QKSSSHERRAFLQAILEHEEQDEEE-DEVPDDETVNQMIARHEEEFDLFMRMDLDRRREE 1294
Query: 1453 --------EMTRYDQVPDWIRASTREV 1471
+ D++P WI EV
Sbjct: 1295 ARNPKRKPRLMEEDELPSWIIKDDAEV 1321
Score = 62.0 bits (149), Expect = 2e-07
Identities = 59/221 (26%), Positives = 93/221 (41%), Gaps = 30/221 (13%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R + L+ + G LA DL K IE K LRLL+ Q +LR E+ + A+
Sbjct: 381 RIQELENLPGSLA---------GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALE 431
Query: 680 DRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLEVHW 728
K K +RQ + AR +++ QK +E++ L SI Q K E H
Sbjct: 432 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHR 491
Query: 729 AIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPG 788
++ + VA YH +E K + +RM L D + YR+++ +++
Sbjct: 492 SVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR-- 549
Query: 789 DAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAK 829
L+ L QT+EY+ L + K Q +E K
Sbjct: 550 --------LAYLLQQTDEYVANLTELVRQHKAAQVAKEKKK 582
Score = 39.3 bits (90), Expect = 1.5
Identities = 39/142 (27%), Positives = 54/142 (37%), Gaps = 32/142 (22%)
Query: 300 NGMPSMH-PQQSSANKSLGADSSLNA-KASSSRSDPEPAKMQYVRQLSQHASLDGGSTKE 357
+ M MH P +S K + D N K RS + QH+ G
Sbjct: 67 DNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMAPPPSPMDQHSQ---GYPSP 123
Query: 358 VGSGNYAK---PQGGPSQMPQKLNG-----------------------FTKNQLHVLKAQ 391
+G +A P GPS PQ +G F +NQLH L+AQ
Sbjct: 124 LGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 392 ILAFRRLKKGDGILPQELLEAI 413
I+A++ L +G LP L A+
Sbjct: 184 IMAYKMLARGQP-LPDHLQMAV 204
>emb|CAD43278.1| brahma-related protein 1 [Rattus norvegicus]
Length = 1613
Score = 404 bits (1037), Expect = e-110
Identities = 275/747 (36%), Positives = 381/747 (50%), Gaps = 102/747 (13%)
Query: 780 LEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQG 839
+E L G A + L +L Y S + +++E EE + A+
Sbjct: 622 VESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPT 681
Query: 840 LSEEEVRAAAACAGEEVM-IRNRFMEMNAPKDGSSS----------VSKYYNLAHAVNEK 888
L EE + ++V + R + NA +D + YY +AHAV E+
Sbjct: 682 LPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTER 741
Query: 889 VLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 948
V +Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K
Sbjct: 742 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 801
Query: 949 NYGPHLIIVPNAVLVNW----------------------KCAFNPENCIDHAE*I--AYM 984
GP LIIVP + L NW + AF P+ + Y
Sbjct: 802 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYE 861
Query: 985 VTIGVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKE 1043
I H L I + I+ RMK+ L + L+ Y RRLLLTGTPLQN L E
Sbjct: 862 YIIKDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPE 920
Query: 1044 LWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPF 1103
LW+LLN LLP +F + F WF+ PF E L E+ ++II RLH++L PF
Sbjct: 921 LWALLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 1104 MLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQ 1163
+LRR +EVE LP KV V++C MSA Q +Y +++ G L + E+ + +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT--- 1032
Query: 1164 AKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF-----------MVKCCGKLWMLDRI 1212
KTL N M+LRK CNHP + S+ + + GK +LDRI
Sbjct: 1033 ----KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088
Query: 1213 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSD 1272
L KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN P S+
Sbjct: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148
Query: 1273 CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVV 1332
FIFLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV- 1207
Query: 1333 DKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFD 1392
S+E I + +YK+++ +VI AG FD
Sbjct: 1208 -------------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFD 1235
Query: 1393 QRTTHEERRLTLETLLHDEERCQETVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE 1452
Q+++ ERR L+ +L EE+ +E +VP + VN+MIAR+EEE +LF +MD + E
Sbjct: 1236 QKSSSHERRAFLQAILEHEEQDEEE-DEVPDDETVNQMIARHEEEFDLFMRMDLDRRREE 1294
Query: 1453 --------EMTRYDQVPDWIRASTREV 1471
+ D++P WI EV
Sbjct: 1295 ARNPKRKPRLMEEDELPSWIIKDDAEV 1321
Score = 62.0 bits (149), Expect = 2e-07
Identities = 59/221 (26%), Positives = 93/221 (41%), Gaps = 30/221 (13%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R + L+ + G LA DL K IE K LRLL+ Q +LR E+ + A+
Sbjct: 381 RIQELENLPGSLA---------GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALE 431
Query: 680 DRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLEVHW 728
K K +RQ + AR +++ QK +E++ L SI Q K E H
Sbjct: 432 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHR 491
Query: 729 AIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPG 788
++ + VA YH +E K + +RM L D + YR+++ +++
Sbjct: 492 SVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR-- 549
Query: 789 DAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAK 829
L+ L QT+EY+ L + K Q +E K
Sbjct: 550 --------LAYLLQQTDEYVANLTELVRQHKAAQVAKEKKK 582
Score = 38.5 bits (88), Expect = 2.5
Identities = 39/142 (27%), Positives = 54/142 (37%), Gaps = 32/142 (22%)
Query: 300 NGMPSMH-PQQSSANKSLGADSSLNA-KASSSRSDPEPAKMQYVRQLSQHASLDGGSTKE 357
+ M MH P +S K + D N K RS + QH+ G
Sbjct: 67 DNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMGPPPSPMDQHSQ---GYPSP 123
Query: 358 VGSGNYAK---PQGGPSQMPQKLNG-----------------------FTKNQLHVLKAQ 391
+G +A P GPS PQ +G F +NQLH L+AQ
Sbjct: 124 LGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 392 ILAFRRLKKGDGILPQELLEAI 413
I+A++ L +G LP L A+
Sbjct: 184 IMAYKMLARGQP-LPDHLQMAV 204
>ref|NP_990390.1| BRG1 protein [Gallus gallus] gi|996018|emb|CAA62831.1| BRG1 protein
[Gallus gallus]
Length = 1630
Score = 403 bits (1035), Expect = e-110
Identities = 385/1323 (29%), Positives = 571/1323 (43%), Gaps = 212/1323 (16%)
Query: 302 MPSMHPQQSSANKSLGADSSLNAKASSSRS-DPEPAKMQYVRQL-------SQHAS---- 349
M SMH + + + G + + + P P+ M Q S+HAS
Sbjct: 76 MDSMHEKGMAEDPRYGQMKGMGMRPGAHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVP 135
Query: 350 LDGGST-KEVGSGNYAKPQGG--PSQMPQKLNG---FTKNQLHVLKAQILAFRRLKKGDG 403
+G S+ ++ SG P G P + Q+ G F +NQLH L+AQI+A++ L +G
Sbjct: 136 ANGPSSGPQLPSGPSGVPMDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQP 195
Query: 404 ILPQELLEAIS---------------PPPLDLH---VQQPIHSAGA------QNQDKSMG 439
LP L A+ PPP VQ P+ G N+ +G
Sbjct: 196 -LPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGAVQGPVQGPGPGPTPPNYNRPHGIG 254
Query: 440 NS-------------VTEQPRQNEPKAKDSQPIVSFDGNSSEQETFVRDQKSTGAEVHMQ 486
+ ++ QP PK P+ + +S + + Q +TG
Sbjct: 255 GANMPPPGPSGVPPGMSGQPPGGPPKPWPEGPMANAAAPTSAPQKLIPPQ-TTGRPSPAP 313
Query: 487 AMLPVTKVSAGKEDQQSAGFSAKS------DKKSEHV--INRAPVINDLALDKGKAVASQ 538
+P QS G A+ +K + I + ++ + + + + Q
Sbjct: 314 PAVPPAVSPVCPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQ 373
Query: 539 ALVTDTAQINKPAQSSTVVGLPKDAGPAKKYYGPLFDFPFFTRKQDSFGSSMMANNNNNL 598
A + Q + S L A K L +F R++ + + L
Sbjct: 374 ARIAHRIQELENLPGSLAGDLRTKATIELKALR-LLNFQRQLRQE----VVVCMRRDTAL 428
Query: 599 SLAYDVKELLYEEGTEVFNKRRTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLL 658
A + K + + R TE L+K + + ERKR + I +
Sbjct: 429 ETALNAKAYKRSKRQSLREARITEKLEKQQ---KIEQERKRRQKHQEYLNSILQHAKDFK 485
Query: 659 DLQARLRGEIDQQQQEIMAMPDRPYRKFVKLCERQRVELARQVQTSQKALREKQLKSIFQ 718
+ + G+I + + + R+ K ER E R++ + E K I Q
Sbjct: 486 EYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDE---EGYRKLIDQ 542
Query: 719 WRKKLLEVHWAIRDARTARNRGVAKYHE--KMLKEFSKNKDDDRNKRMEALK------NN 770
+ K L D A + + H+ ++ KE K K + + E
Sbjct: 543 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTAAIGPDGE 602
Query: 771 DVDRYREML--------LEQQTSLPGDAAERYNVLSTFLTQTEEY--LQKLGSKITSAKN 820
+D +M +E L G A + L +L Y + S+ + ++
Sbjct: 603 PLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEE 662
Query: 821 QQEVEESAKAAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDGSSSVSK--- 877
++E EE + A L ++++ + EV R+ D VS+
Sbjct: 663 EEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALA 722
Query: 878 -----YYNLAHAVNEKVLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGK 932
YY +AHAV E+V +Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGK
Sbjct: 723 RGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGK 782
Query: 933 TVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNW----------------------KCAFN 970
T+Q +ALI YLME K GP LIIVP + L NW + AF
Sbjct: 783 TIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV 842
Query: 971 PENCIDHAE*I--AYMVTIGVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCH 1027
P+ + Y I H L I + I+ RMK+ L + L+ Y
Sbjct: 843 PQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAP 901
Query: 1028 RRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETE 1087
RRLLLTGTPLQN L ELW+LLN LLP +F + F WF+ PF E L E
Sbjct: 902 RRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEE 956
Query: 1088 KKVIIIHRLHQILEPFMLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRL 1147
+ ++II RLH++L PF+LRR +EVE LP KV V++C MSA Q +Y +++ G L
Sbjct: 957 ETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLT 1016
Query: 1148 NPEEEQSRMEKSPLYQAKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF--------- 1198
+ E+ + + KTL N M+LRK CNHP + S+
Sbjct: 1017 DGSEKDKKGKGGT-------KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQG 1069
Query: 1199 --MVKCCGKLWMLDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTAL 1256
+ + GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT
Sbjct: 1070 LDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKA 1129
Query: 1257 EDRESAIVDFNSPNSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHR 1316
EDR + FN P S+ FIFLLS RA G GLNLQSADTV+I+D D NP + QA RAHR
Sbjct: 1130 EDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHR 1189
Query: 1317 IGQKREVKVIYMEAVVDKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQ 1376
IGQ+ EV+V+ + V S+E I + +
Sbjct: 1190 IGQQNEVRVLRLCTV--------------------------------NSVEEKILA-AAK 1216
Query: 1377 YKIDMADEVINAGRFDQRTTHEERRLTLETLL----HDEERC----------------QE 1416
YK+++ +VI AG FDQ+++ ERR L+ +L DE RC +
Sbjct: 1217 YKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRCGAASSLCLTAEPEEPPLK 1276
Query: 1417 TVHDVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE--------EMTRYDQVPDWIRAST 1468
+VP + VN+MIAR+EEE +LF +MD + E + D++P WI
Sbjct: 1277 EEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDD 1336
Query: 1469 REV 1471
EV
Sbjct: 1337 AEV 1339
>ref|NP_003063.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin a4 [Homo sapiens] gi|10946128|gb|AAG24789.1|
SMARCA4 isoform 1 [Homo sapiens]
Length = 1647
Score = 393 bits (1009), Expect = e-107
Identities = 309/957 (32%), Positives = 440/957 (45%), Gaps = 154/957 (16%)
Query: 619 RRTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAM 678
R +K+E + ERKR + I + + + G+I + + +
Sbjct: 448 REARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATY 507
Query: 679 PDRPYRKFVKLCERQRVELARQVQTSQKALREKQLKSIFQWRKKLLEVHWAIRDARTARN 738
R+ K ER E R++ + E K I Q + K L D A
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDE---EGYRKLIDQKKDKRLAYLLQQTDEYVANL 564
Query: 739 RGVAKYHE--KMLKEFSKNKDDDRNKRMEALK------NNDVDRYREML--------LEQ 782
+ + H+ ++ KE K K + + E +D +M +E
Sbjct: 565 TELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVES 624
Query: 783 QTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQGLSE 842
L G A + L +L Y S + +++E EE + AA+ L
Sbjct: 625 GKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPV 684
Query: 843 EEVRAAAACAGEEVM-IRNRFMEMNAPKDGSSS----------VSKYYNLAHAVNEKVLR 891
EE + ++V + R + NA +D + YY +AHAV E+V +
Sbjct: 685 EEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDK 744
Query: 892 QPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYG 951
Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K G
Sbjct: 745 QSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRING 804
Query: 952 PHLIIVPNAVLVNW----------------------KCAFNPENCIDHAE*I--AYMVTI 987
P LIIVP + L NW + AF P+ + Y I
Sbjct: 805 PFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYII 864
Query: 988 GVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKELWS 1046
H L I + I+ RMK+ L + L+ Y RRLLLTGTPLQN L ELW+
Sbjct: 865 KDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWA 923
Query: 1047 LLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPFMLR 1106
LLN LLP +F + F WF+ PF E L E+ ++II RLH++L PF+LR
Sbjct: 924 LLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEETILIIRRLHKVLRPFLLR 978
Query: 1107 RRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQAKQ 1166
R +EVE LP KV V++C MSA Q +Y +++ G L + E+ + +
Sbjct: 979 RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT------ 1032
Query: 1167 YKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF-----------MVKCCGKLWMLDRILIK 1215
KTL N M+LRK CNHP + S+ + + GK +LDRIL K
Sbjct: 1033 -KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 1216 LQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFI 1275
L+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN P S+ FI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 1276 FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKI 1335
FLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV---- 1207
Query: 1336 SSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRT 1395
S+E I + +YK+++ +VI AG FDQ++
Sbjct: 1208 ----------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFDQKS 1238
Query: 1396 THEERRLTLETLLHDEERCQETVH---------------------------------DVP 1422
+ ERR L+ +L EE+ E+ H +VP
Sbjct: 1239 SSHERRAFLQAILEHEEQ-DESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVP 1297
Query: 1423 SLQEVNRMIARNEEEVELFDQMDEEEDWLE--------EMTRYDQVPDWIRASTREV 1471
+ VN+MIAR+EEE +LF +MD + E + D++P WI EV
Sbjct: 1298 DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1354
Score = 61.6 bits (148), Expect = 3e-07
Identities = 59/221 (26%), Positives = 93/221 (41%), Gaps = 30/221 (13%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R + L+ + G LA DL K IE K LRLL+ Q +LR E+ + A+
Sbjct: 381 RIQELENLPGSLA---------GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALE 431
Query: 680 DRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLEVHW 728
K K +RQ + AR +++ QK +E++ L SI Q K E H
Sbjct: 432 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHR 491
Query: 729 AIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPG 788
++ + VA YH +E K + +RM L D + YR+++ +++
Sbjct: 492 SVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR-- 549
Query: 789 DAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAK 829
L+ L QT+EY+ L + K Q +E K
Sbjct: 550 --------LAYLLQQTDEYVANLTELVRQHKAAQVAKEKKK 582
Score = 38.9 bits (89), Expect = 1.9
Identities = 39/142 (27%), Positives = 54/142 (37%), Gaps = 32/142 (22%)
Query: 300 NGMPSMH-PQQSSANKSLGADSSLNA-KASSSRSDPEPAKMQYVRQLSQHASLDGGSTKE 357
+ M MH P +S K + D N K RS + QH+ G
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ---GYPSP 123
Query: 358 VGSGNYAK---PQGGPSQMPQKLNG-----------------------FTKNQLHVLKAQ 391
+G +A P GPS PQ +G F +NQLH L+AQ
Sbjct: 124 LGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 392 ILAFRRLKKGDGILPQELLEAI 413
I+A++ L +G LP L A+
Sbjct: 184 IMAYKMLARGQP-LPDHLQMAV 204
>gb|AAG24790.1| SMARCA4 isoform 2 [Homo sapiens]
Length = 1679
Score = 393 bits (1009), Expect = e-107
Identities = 309/957 (32%), Positives = 440/957 (45%), Gaps = 154/957 (16%)
Query: 619 RRTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAM 678
R +K+E + ERKR + I + + + G+I + + +
Sbjct: 448 REARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATY 507
Query: 679 PDRPYRKFVKLCERQRVELARQVQTSQKALREKQLKSIFQWRKKLLEVHWAIRDARTARN 738
R+ K ER E R++ + E K I Q + K L D A
Sbjct: 508 HANTEREQKKENERIEKERMRRLMAEDE---EGYRKLIDQKKDKRLAYLLQQTDEYVANL 564
Query: 739 RGVAKYHE--KMLKEFSKNKDDDRNKRMEALK------NNDVDRYREML--------LEQ 782
+ + H+ ++ KE K K + + E +D +M +E
Sbjct: 565 TELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVES 624
Query: 783 QTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQGLSE 842
L G A + L +L Y S + +++E EE + AA+ L
Sbjct: 625 GKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPV 684
Query: 843 EEVRAAAACAGEEVM-IRNRFMEMNAPKDGSSS----------VSKYYNLAHAVNEKVLR 891
EE + ++V + R + NA +D + YY +AHAV E+V +
Sbjct: 685 EEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDK 744
Query: 892 QPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYG 951
Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K G
Sbjct: 745 QSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRING 804
Query: 952 PHLIIVPNAVLVNW----------------------KCAFNPENCIDHAE*I--AYMVTI 987
P LIIVP + L NW + AF P+ + Y I
Sbjct: 805 PFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYII 864
Query: 988 GVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKELWS 1046
H L I + I+ RMK+ L + L+ Y RRLLLTGTPLQN L ELW+
Sbjct: 865 KDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWA 923
Query: 1047 LLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPFMLR 1106
LLN LLP +F + F WF+ PF E L E+ ++II RLH++L PF+LR
Sbjct: 924 LLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEETILIIRRLHKVLRPFLLR 978
Query: 1107 RRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQAKQ 1166
R +EVE LP KV V++C MSA Q +Y +++ G L + E+ + +
Sbjct: 979 RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT------ 1032
Query: 1167 YKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF-----------MVKCCGKLWMLDRILIK 1215
KTL N M+LRK CNHP + S+ + + GK +LDRIL K
Sbjct: 1033 -KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 1216 LQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFI 1275
L+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN P S+ FI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 1276 FLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKI 1335
FLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV---- 1207
Query: 1336 SSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRT 1395
S+E I + +YK+++ +VI AG FDQ++
Sbjct: 1208 ----------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFDQKS 1238
Query: 1396 THEERRLTLETLLHDEERCQETVH---------------------------------DVP 1422
+ ERR L+ +L EE+ E+ H +VP
Sbjct: 1239 SSHERRAFLQAILEHEEQ-DESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVP 1297
Query: 1423 SLQEVNRMIARNEEEVELFDQMDEEEDWLE--------EMTRYDQVPDWIRASTREV 1471
+ VN+MIAR+EEE +LF +MD + E + D++P WI EV
Sbjct: 1298 DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1354
Score = 61.6 bits (148), Expect = 3e-07
Identities = 59/221 (26%), Positives = 93/221 (41%), Gaps = 30/221 (13%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R + L+ + G LA DL K IE K LRLL+ Q +LR E+ + A+
Sbjct: 381 RIQELENLPGSLA---------GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALE 431
Query: 680 DRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLEVHW 728
K K +RQ + AR +++ QK +E++ L SI Q K E H
Sbjct: 432 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHR 491
Query: 729 AIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPG 788
++ + VA YH +E K + +RM L D + YR+++ +++
Sbjct: 492 SVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR-- 549
Query: 789 DAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAK 829
L+ L QT+EY+ L + K Q +E K
Sbjct: 550 --------LAYLLQQTDEYVANLTELVRQHKAAQVAKEKKK 582
Score = 38.9 bits (89), Expect = 1.9
Identities = 39/142 (27%), Positives = 54/142 (37%), Gaps = 32/142 (22%)
Query: 300 NGMPSMH-PQQSSANKSLGADSSLNA-KASSSRSDPEPAKMQYVRQLSQHASLDGGSTKE 357
+ M MH P +S K + D N K RS + QH+ G
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ---GYPSP 123
Query: 358 VGSGNYAK---PQGGPSQMPQKLNG-----------------------FTKNQLHVLKAQ 391
+G +A P GPS PQ +G F +NQLH L+AQ
Sbjct: 124 LGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 392 ILAFRRLKKGDGILPQELLEAI 413
I+A++ L +G LP L A+
Sbjct: 184 IMAYKMLARGQP-LPDHLQMAV 204
>dbj|BAA05143.1| transcriptional activator hSNF2b [Homo sapiens]
gi|1711407|sp|P51532|SMCA4_HUMAN Possible global
transcription activator SNF2L4 (SNF2-beta) (BRG-1
protein) (Mitotic growth and transcription activator)
(Brahma protein homolog 1) (SWI/SNF related matrix
associated actin dependent regulator of chromatin
subfamily A member 4) gi|902046|gb|AAB40977.1|
transcriptional activator [Homo sapiens]
Length = 1647
Score = 392 bits (1007), Expect = e-107
Identities = 277/780 (35%), Positives = 383/780 (48%), Gaps = 135/780 (17%)
Query: 780 LEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQG 839
+E L G A + L +L Y S + +++E EE + AA+
Sbjct: 622 VESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPT 681
Query: 840 LSEEEVRAAAACAGEEVM-IRNRFMEMNAPKDGSSS----------VSKYYNLAHAVNEK 888
L EE + ++V + R + NA +D + YY +AHAV E+
Sbjct: 682 LPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTER 741
Query: 889 VLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 948
V +Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K
Sbjct: 742 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 801
Query: 949 NYGPHLIIVPNAVLVNW----------------------KCAFNPENCIDHAE*I--AYM 984
GP LIIVP + L NW + AF P+ + Y
Sbjct: 802 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYE 861
Query: 985 VTIGVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKE 1043
I H L I + I+ RMK+ L + L+ Y RRLLLTGTPLQN L E
Sbjct: 862 YIIKDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPE 920
Query: 1044 LWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPF 1103
LW+LLN LLP +F + F WF+ PF E L E+ ++II RLH++L PF
Sbjct: 921 LWALLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 1104 MLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQ 1163
+LRR +EVE LP KV V++C MSA Q +Y +++ G L + E+ + +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT--- 1032
Query: 1164 AKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF-----------MVKCCGKLWMLDRI 1212
KTL N M+LRK CNHP + S+ + + GK +LDRI
Sbjct: 1033 ----KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088
Query: 1213 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSD 1272
L KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN P S+
Sbjct: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148
Query: 1273 CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVV 1332
FIFLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV- 1207
Query: 1333 DKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFD 1392
S+E I + +YK+++ +VI AG FD
Sbjct: 1208 -------------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFD 1235
Query: 1393 QRTTHEERRLTLETLLHDEERCQETVH--------------------------------- 1419
Q+++ ERR L+ +L EE+ E+ H
Sbjct: 1236 QKSSSHERRAFLQAILEHEEQ-DESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEED 1294
Query: 1420 DVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE--------EMTRYDQVPDWIRASTREV 1471
+VP + VN+MIAR+EEE +LF +MD + E + D++P WI EV
Sbjct: 1295 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1354
Score = 61.6 bits (148), Expect = 3e-07
Identities = 59/221 (26%), Positives = 93/221 (41%), Gaps = 30/221 (13%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R + L+ + G LA DL K IE K LRLL+ Q +LR E+ + A+
Sbjct: 381 RIQELENLPGSLA---------GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALE 431
Query: 680 DRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLEVHW 728
K K +RQ + AR +++ QK +E++ L SI Q K E H
Sbjct: 432 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHR 491
Query: 729 AIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPG 788
++ + VA YH +E K + +RM L D + YR+++ +++
Sbjct: 492 SVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR-- 549
Query: 789 DAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAK 829
L+ L QT+EY+ L + K Q +E K
Sbjct: 550 --------LAYLLQQTDEYVANLTELVPQHKAAQVAKEKKK 582
Score = 38.9 bits (89), Expect = 1.9
Identities = 39/142 (27%), Positives = 54/142 (37%), Gaps = 32/142 (22%)
Query: 300 NGMPSMH-PQQSSANKSLGADSSLNA-KASSSRSDPEPAKMQYVRQLSQHASLDGGSTKE 357
+ M MH P +S K + D N K RS + QH+ G
Sbjct: 67 DNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ---GYPSP 123
Query: 358 VGSGNYAK---PQGGPSQMPQKLNG-----------------------FTKNQLHVLKAQ 391
+G +A P GPS PQ +G F +NQLH L+AQ
Sbjct: 124 LGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 392 ILAFRRLKKGDGILPQELLEAI 413
I+A++ L +G LP L A+
Sbjct: 184 IMAYKMLARGQP-LPDHLQMAV 204
>ref|XP_343359.2| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a, member 4 [Rattus
norvegicus]
Length = 1647
Score = 390 bits (1002), Expect = e-106
Identities = 276/780 (35%), Positives = 382/780 (48%), Gaps = 135/780 (17%)
Query: 780 LEQQTSLPGDAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQG 839
+E L G A + L +L Y S + +++E EE + A+
Sbjct: 622 VESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPT 681
Query: 840 LSEEEVRAAAACAGEEVM-IRNRFMEMNAPKDGSSS----------VSKYYNLAHAVNEK 888
L EE + ++V + R + NA +D + YY +AHAV E+
Sbjct: 682 LPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTER 741
Query: 889 VLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 948
V +Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K
Sbjct: 742 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 801
Query: 949 NYGPHLIIVPNAVLVNW----------------------KCAFNPENCIDHAE*I--AYM 984
GP LIIVP + L NW + AF P+ + Y
Sbjct: 802 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYE 861
Query: 985 VTIGVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRRLLLTGTPLQNDLKE 1043
I H L I + I+ RMK+ L + L+ Y RRLLLTGTPLQN L E
Sbjct: 862 YIIKDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPE 920
Query: 1044 LWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKKVIIIHRLHQILEPF 1103
LW+LLN LLP +F + F WF+ PF E L E+ ++II RLH++L PF
Sbjct: 921 LWALLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 1104 MLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNPEEEQSRMEKSPLYQ 1163
+LRR +EVE LP KV V++C MSA Q +Y +++ G L + E+ + +
Sbjct: 976 LLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT--- 1032
Query: 1164 AKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF-----------MVKCCGKLWMLDRI 1212
KTL N M+LRK CNHP + S+ + + GK +LDRI
Sbjct: 1033 ----KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRI 1088
Query: 1213 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSD 1272
L KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN P S+
Sbjct: 1089 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSE 1148
Query: 1273 CFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVV 1332
FIFLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1149 YFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV- 1207
Query: 1333 DKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFD 1392
S+E I + +YK+++ +VI AG FD
Sbjct: 1208 -------------------------------NSVEEKILA-AAKYKLNVDQKVIQAGMFD 1235
Query: 1393 QRTTHEERRLTLETLLHDEERCQETVH--------------------------------- 1419
Q+++ ERR L+ +L EE+ E+ H
Sbjct: 1236 QKSSSHERRAFLQAILEHEEQ-DESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEED 1294
Query: 1420 DVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE--------EMTRYDQVPDWIRASTREV 1471
+VP + VN+MIAR+EEE +LF +MD + E + D++P WI EV
Sbjct: 1295 EVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1354
Score = 62.0 bits (149), Expect = 2e-07
Identities = 59/221 (26%), Positives = 93/221 (41%), Gaps = 30/221 (13%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R + L+ + G LA DL K IE K LRLL+ Q +LR E+ + A+
Sbjct: 381 RIQELENLPGSLA---------GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALE 431
Query: 680 DRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLEVHW 728
K K +RQ + AR +++ QK +E++ L SI Q K E H
Sbjct: 432 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHR 491
Query: 729 AIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPG 788
++ + VA YH +E K + +RM L D + YR+++ +++
Sbjct: 492 SVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR-- 549
Query: 789 DAAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAK 829
L+ L QT+EY+ L + K Q +E K
Sbjct: 550 --------LAYLLQQTDEYVANLTELVRQHKAAQVAKEKKK 582
Score = 38.5 bits (88), Expect = 2.5
Identities = 39/142 (27%), Positives = 54/142 (37%), Gaps = 32/142 (22%)
Query: 300 NGMPSMH-PQQSSANKSLGADSSLNA-KASSSRSDPEPAKMQYVRQLSQHASLDGGSTKE 357
+ M MH P +S K + D N K RS + QH+ G
Sbjct: 67 DNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMGPPPSPMDQHSQ---GYPSP 123
Query: 358 VGSGNYAK---PQGGPSQMPQKLNG-----------------------FTKNQLHVLKAQ 391
+G +A P GPS PQ +G F +NQLH L+AQ
Sbjct: 124 LGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQLRAQ 183
Query: 392 ILAFRRLKKGDGILPQELLEAI 413
I+A++ L +G LP L A+
Sbjct: 184 IMAYKMLARGQP-LPDHLQMAV 204
>ref|XP_533915.1| PREDICTED: similar to SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a4 [Canis
familiaris]
Length = 2022
Score = 387 bits (995), Expect = e-105
Identities = 256/674 (37%), Positives = 347/674 (50%), Gaps = 124/674 (18%)
Query: 875 VSKYYNLAHAVNEKVLRQPSMLRAGTLREYQLVGLQWMLSLYNNKLNGILADEMGLGKTV 934
+ YY +AHAV E+V +Q +++ G L++YQ+ GL+W++SLYNN LNGILADEMGLGKT+
Sbjct: 1052 LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 1111
Query: 935 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNW----------------------KCAFNPE 972
Q +ALI YLME K GP LIIVP + L NW + AF P+
Sbjct: 1112 QTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ 1171
Query: 973 NCIDHAE*I--AYMVTIGVMHFLCWIEGSSVKIIFSTQRMKDRESVLARDLD-RYRCHRR 1029
+ Y I H L I + I+ RMK+ L + L+ Y RR
Sbjct: 1172 LRSGKFNVLLTTYEYIIKDKHILAKIRWKYM-IVDEGHRMKNHHCKLTQVLNTHYVAPRR 1230
Query: 1030 LLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEDPNQNAENDWLETEKK 1089
LLLTGTPLQN L ELW+LLN LLP +F + F WF+ PF E L E+
Sbjct: 1231 LLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA-----MTGEKVDLNEEET 1285
Query: 1090 VIIIHRLHQILEPFMLRRRVEEVEGSLPPKVSIVLRCRMSAFQSAIYDWIKSTGTLRLNP 1149
++II RLH++L PF+LRR +EVE LP KV V++C MSA Q +Y +++ G L +
Sbjct: 1286 ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG 1345
Query: 1150 EEEQSRMEKSPLYQAKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKDF----------- 1198
E+ + + KTL N M+LRK CNHP + S+
Sbjct: 1346 SEKDKKGKGGT-------KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1398
Query: 1199 MVKCCGKLWMLDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTALED 1258
+ + GK +LDRIL KL+ T H+VLLF MT L+ I+E+Y +R Y R+DGTT ED
Sbjct: 1399 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1458
Query: 1259 RESAIVDFNSPNSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIG 1318
R + FN P S+ FIFLLS RA G GLNLQSADTV+I+D D NP + QA RAHRIG
Sbjct: 1459 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1518
Query: 1319 QKREVKVIYMEAVVDKISSHQKEDEMRIGGTIDMEDELAGKDRYIGSIESLIRSNIQQYK 1378
Q+ EV+V+ + V S+E I + +YK
Sbjct: 1519 QQNEVRVLRLCTV--------------------------------NSVEEKILA-AAKYK 1545
Query: 1379 IDMADEVINAGRFDQRTTHEERRLTLETLLHDEERCQETVH------------------- 1419
+++ +VI AG FDQ+++ ERR L+ +L EE+ E+ H
Sbjct: 1546 LNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ-DESRHCSTGSGSASFAHTAPPPAG 1604
Query: 1420 --------------DVPSLQEVNRMIARNEEEVELFDQMDEEEDWLE--------EMTRY 1457
+VP + VN+MIAR+EEE +LF +MD + E +
Sbjct: 1605 VNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEE 1664
Query: 1458 DQVPDWIRASTREV 1471
D++P WI EV
Sbjct: 1665 DELPSWIIKDDAEV 1678
Score = 48.1 bits (113), Expect = 0.003
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 43/244 (17%)
Query: 620 RTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEIDQQQQEIMAMP 679
R + L+ + G LA DL K IE K LRLL+ Q +LR E+ + A+
Sbjct: 684 RIQELENLPGSLA---------GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALE 734
Query: 680 DRPYRKFVKLCERQRVELAR---QVQTSQKALREKQ--------LKSIFQWRKKLLEVHW 728
K K +RQ + AR +++ QK +E++ L SI Q K E H
Sbjct: 735 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHR 794
Query: 729 AIRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRME------------ALKNNDVDRYR 776
++ + VA YH +E K + +RM +L +D +
Sbjct: 795 SVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMPPVGFLTLGSLPGALMDEHL 854
Query: 777 EMLLEQQ--TSLPGDAAERYNV---------LSTFLTQTEEYLQKLGSKITSAKNQQEVE 825
+ + T L + E Y L+ L QT+EY+ L + K Q +
Sbjct: 855 SLASKHHNLTLLQAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAK 914
Query: 826 ESAK 829
E K
Sbjct: 915 EKKK 918
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.130 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,555,054,187
Number of Sequences: 2540612
Number of extensions: 154772330
Number of successful extensions: 486523
Number of sequences better than 10.0: 3656
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 2125
Number of HSP's that attempted gapping in prelim test: 464917
Number of HSP's gapped (non-prelim): 15249
length of query: 2139
length of database: 863,360,394
effective HSP length: 144
effective length of query: 1995
effective length of database: 497,512,266
effective search space: 992536970670
effective search space used: 992536970670
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 83 (36.6 bits)
Medicago: description of AC139601.1