BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139525.10 + phase: 0
(125 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR20762.1| At4g34750 [Arabidopsis thaliana] gi|41349926|gb|A... 91 6e-18
emb|CAB80192.1| putative protein [Arabidopsis thaliana] gi|30969... 91 6e-18
ref|NP_565113.1| auxin-responsive family protein [Arabidopsis th... 89 2e-17
gb|AAF87116.1| F10A5.20 [Arabidopsis thaliana] 89 2e-17
gb|AAM64884.1| auxin-induced protein, putative [Arabidopsis thal... 88 4e-17
ref|NP_173413.1| auxin-responsive family protein [Arabidopsis th... 86 2e-16
emb|CAB96854.1| putative protein [Arabidopsis thaliana] gi|15238... 83 1e-15
ref|XP_474224.1| OSJNBa0084K01.8 [Oryza sativa (japonica cultiva... 82 2e-15
ref|XP_474225.1| OSJNBa0084K01.9 [Oryza sativa (japonica cultiva... 75 4e-13
gb|AAY78720.1| auxin-responsive family protein [Arabidopsis thal... 75 4e-13
ref|NP_178034.1| auxin-responsive family protein [Arabidopsis th... 72 2e-12
dbj|BAC42954.1| putative auxin-regulated protein [Arabidopsis th... 70 2e-11
emb|CAE05452.3| OSJNBa0073E02.12 [Oryza sativa (japonica cultiva... 69 2e-11
gb|AAM62891.1| unknown [Arabidopsis thaliana] 69 2e-11
gb|AAN65371.1| auxin-regulated protein [Phaseolus vulgaris] 69 3e-11
emb|CAB86483.1| putative protein [Arabidopsis thaliana] gi|15229... 69 3e-11
dbj|BAC43209.1| unknown protein [Arabidopsis thaliana] gi|283728... 69 3e-11
dbj|BAD36439.1| auxin-induced protein-like [Oryza sativa (japoni... 69 3e-11
gb|AAG14455.1| auxin-induced protein TGSAUR21 [Tulipa gesneriana] 69 3e-11
dbj|BAB02427.1| auxin-regulated protein-like [Arabidopsis thalia... 68 4e-11
>gb|AAR20762.1| At4g34750 [Arabidopsis thaliana] gi|41349926|gb|AAS00348.1|
At4g34750 [Arabidopsis thaliana]
Length = 150
Score = 90.9 bits (224), Expect = 6e-18
Identities = 45/82 (54%), Positives = 56/82 (67%), Gaps = 3/82 (3%)
Query: 1 MACMWRKNA---CSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEG 57
M W+K A S SDVP GH+AV+VGE RR+V+RA +LNHP+ + LL +A E
Sbjct: 16 MLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNHPIFRRLLAEAEEE 75
Query: 58 YGFNKSGPLSIPCDEFLFEDIL 79
YGF GPL+IPCDE LFEDI+
Sbjct: 76 YGFANVGPLAIPCDESLFEDII 97
>emb|CAB80192.1| putative protein [Arabidopsis thaliana]
gi|3096944|emb|CAA18854.1| putative protein
[Arabidopsis thaliana] gi|15236186|ref|NP_195201.1|
auxin-responsive protein, putative / small auxin up RNA
(SAUR_E) [Arabidopsis thaliana] gi|7487665|pir||T05295
hypothetical protein T4L20.330 - Arabidopsis thaliana
Length = 150
Score = 90.9 bits (224), Expect = 6e-18
Identities = 45/82 (54%), Positives = 56/82 (67%), Gaps = 3/82 (3%)
Query: 1 MACMWRKNA---CSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEG 57
M W+K A S SDVP GH+AV+VGE RR+V+RA +LNHP+ + LL +A E
Sbjct: 16 MLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNHPIFRRLLAEAEEE 75
Query: 58 YGFNKSGPLSIPCDEFLFEDIL 79
YGF GPL+IPCDE LFEDI+
Sbjct: 76 YGFANVGPLAIPCDESLFEDII 97
>ref|NP_565113.1| auxin-responsive family protein [Arabidopsis thaliana]
Length = 154
Score = 89.4 bits (220), Expect = 2e-17
Identities = 46/91 (50%), Positives = 62/91 (67%), Gaps = 2/91 (2%)
Query: 6 RKNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGP 65
R ++ + +PSDVP GH+AV VG + RRFV+RA YLNHPVL+ LL QA E +GF GP
Sbjct: 29 RMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVVRATYLNHPVLRNLLVQAEEEFGFVNQGP 88
Query: 66 LSIPCDEFLFEDIL--LSLGGGTVARRSSSP 94
L IPC+E +FE+ + +S T +RR + P
Sbjct: 89 LVIPCEESVFEESIRFISRSDSTRSRRFTCP 119
>gb|AAF87116.1| F10A5.20 [Arabidopsis thaliana]
Length = 198
Score = 89.4 bits (220), Expect = 2e-17
Identities = 46/91 (50%), Positives = 62/91 (67%), Gaps = 2/91 (2%)
Query: 6 RKNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGP 65
R ++ + +PSDVP GH+AV VG + RRFV+RA YLNHPVL+ LL QA E +GF GP
Sbjct: 29 RMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVVRATYLNHPVLRNLLVQAEEEFGFVNQGP 88
Query: 66 LSIPCDEFLFEDIL--LSLGGGTVARRSSSP 94
L IPC+E +FE+ + +S T +RR + P
Sbjct: 89 LVIPCEESVFEESIRFISRSDSTRSRRFTCP 119
>gb|AAM64884.1| auxin-induced protein, putative [Arabidopsis thaliana]
Length = 154
Score = 88.2 bits (217), Expect = 4e-17
Identities = 45/91 (49%), Positives = 62/91 (67%), Gaps = 2/91 (2%)
Query: 6 RKNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGP 65
R ++ + +PSD+P GH+AV VG + RRFV+RA YLNHPVL+ LL QA E +GF GP
Sbjct: 29 RMSSSFSRCVPSDLPSGHVAVYVGSSCRRFVVRATYLNHPVLRNLLVQAEEEFGFVNQGP 88
Query: 66 LSIPCDEFLFEDIL--LSLGGGTVARRSSSP 94
L IPC+E +FE+ + +S T +RR + P
Sbjct: 89 LVIPCEESVFEESIRFISRSDSTRSRRFTCP 119
>ref|NP_173413.1| auxin-responsive family protein [Arabidopsis thaliana]
gi|25513638|pir||F86331 F6F9.11 protein - Arabidopsis
thaliana gi|10086488|gb|AAG12548.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 153
Score = 85.9 bits (211), Expect = 2e-16
Identities = 43/90 (47%), Positives = 56/90 (61%), Gaps = 3/90 (3%)
Query: 5 WRKNA---CSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFN 61
WR A + +PSDVP GH+AV VG RRFV+RA YLNHP++ LL QA E +GF
Sbjct: 24 WRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVRASYLNHPIISNLLVQAEEEFGFA 83
Query: 62 KSGPLSIPCDEFLFEDILLSLGGGTVARRS 91
GPL IPC+E +FE+ + + +R S
Sbjct: 84 NQGPLVIPCEESVFEEAIRFISRSDSSRSS 113
>emb|CAB96854.1| putative protein [Arabidopsis thaliana]
gi|15238919|ref|NP_196660.1| auxin-responsive family
protein [Arabidopsis thaliana] gi|11358297|pir||T50808
hypothetical protein T30N20_260 - Arabidopsis thaliana
Length = 148
Score = 83.2 bits (204), Expect = 1e-15
Identities = 50/127 (39%), Positives = 70/127 (54%), Gaps = 11/127 (8%)
Query: 1 MACMWRKNACSG---KKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEG 57
M WR A + +PSDVP GH+AV VG + RRFV+ A YLNHP+L LL +A E
Sbjct: 20 MLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVLATYLNHPILMNLLVKAEEE 79
Query: 58 YGFNKSGPLSIPCDEFLFEDILLSLGGGT------VARRSSSPVLTKKLDLSFLKDAVPL 111
+GF GPL IPC+E +FE+ + + + +++ + KLDL L ++ PL
Sbjct: 80 FGFANQGPLVIPCEESVFEESIRFITRSSRFTCTDDLKKNRHGGIRSKLDL--LMESRPL 137
Query: 112 LEAFDSK 118
L K
Sbjct: 138 LHGVSEK 144
>ref|XP_474224.1| OSJNBa0084K01.8 [Oryza sativa (japonica cultivar-group)]
gi|38346068|emb|CAE04836.2| OSJNBa0084K01.8 [Oryza
sativa (japonica cultivar-group)]
Length = 143
Score = 82.4 bits (202), Expect = 2e-15
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 5 WRKNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKS- 63
WR A + + VP GH+AV VG +RRFV+RA +LNHPV +ELL QA E YGF
Sbjct: 20 WRSRAAA-RAAAEAVPAGHVAVCVGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGA 78
Query: 64 --GPLSIPCDEFLFEDILLSLGGGTVARR 90
GP+++PCDE LFE +L L + A R
Sbjct: 79 YCGPIALPCDEGLFEHVLRHLSSPSSAAR 107
>ref|XP_474225.1| OSJNBa0084K01.9 [Oryza sativa (japonica cultivar-group)]
gi|38346069|emb|CAE04837.2| OSJNBa0084K01.9 [Oryza
sativa (japonica cultivar-group)]
Length = 153
Score = 75.1 bits (183), Expect = 4e-13
Identities = 51/115 (44%), Positives = 65/115 (56%), Gaps = 23/115 (20%)
Query: 5 WRKNACS---GKKLPSD---VPRGHLAVTVG---ETNRRFVIRADYLNHPVLQELLDQAY 55
WR A + G K+ D VP GH+AV VG E RRFV+R +LNHP +ELL QA
Sbjct: 20 WRSRAAARPAGSKMERDGDAVPAGHVAVRVGGGGEDARRFVVRVAHLNHPAFRELLRQAE 79
Query: 56 EGYGF--NKSGPLSIPCDEFLFEDILLSLGGGTVARRSSSPVLTKKLDLSFLKDA 108
E YGF SGP+++PCDE F D+L RR SS ++ DL+F + A
Sbjct: 80 EEYGFPSGASGPVALPCDEDHFRDVL---------RRVSS---DERHDLAFCRPA 122
>gb|AAY78720.1| auxin-responsive family protein [Arabidopsis thaliana]
gi|4883619|gb|AAD31588.1| putative auxin-induced protein
[Arabidopsis thaliana] gi|25408525|pir||F84787 probable
auxin-induced protein [imported] - Arabidopsis thaliana
gi|15228072|ref|NP_181240.1| auxin-responsive family
protein [Arabidopsis thaliana]
Length = 124
Score = 75.1 bits (183), Expect = 4e-13
Identities = 35/69 (50%), Positives = 45/69 (64%)
Query: 15 LPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPLSIPCDEFL 74
+P DVP+GHL V VGE +RFVI + L HP+ Q LLDQA + YGF+ L IPC+E
Sbjct: 45 IPRDVPKGHLVVYVGEEYKRFVININLLKHPLFQALLDQAQDAYGFSADSRLWIPCNEST 104
Query: 75 FEDILLSLG 83
F D++ G
Sbjct: 105 FLDVVRCAG 113
>ref|NP_178034.1| auxin-responsive family protein [Arabidopsis thaliana]
gi|3152585|gb|AAC17066.1| Contains similarity to
auxin-induced protein TM018A10.6 from A. thaliana BAC
gb|AF013294. [Arabidopsis thaliana]
gi|7487901|pir||T01042 hypothetical protein YUP8H12R.25
- Arabidopsis thaliana
Length = 134
Score = 72.4 bits (176), Expect = 2e-12
Identities = 33/69 (47%), Positives = 46/69 (65%)
Query: 17 SDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPLSIPCDEFLFE 76
S VP GH+ V VGE RFV+ A+ LNHPV LL+++ + YG+ + G L IPC+ F+FE
Sbjct: 46 SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105
Query: 77 DILLSLGGG 85
++ SL G
Sbjct: 106 QVVESLRSG 114
>dbj|BAC42954.1| putative auxin-regulated protein [Arabidopsis thaliana]
gi|28973279|gb|AAO63964.1| putative auxin-regulated
protein [Arabidopsis thaliana] gi|4582443|gb|AAD24828.1|
putative auxin-regulated protein [Arabidopsis thaliana]
gi|20197719|gb|AAM15223.1| putative auxin-regulated
protein [Arabidopsis thaliana]
gi|15226486|ref|NP_179718.1| auxin-responsive protein,
putative [Arabidopsis thaliana] gi|25296217|pir||F84598
probable auxin-regulated protein [imported] -
Arabidopsis thaliana
Length = 104
Score = 69.7 bits (169), Expect = 2e-11
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 7 KNACSGKK-LPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGP 65
KN C + LP DVP+GH V VGE R+++ +L HP + LL QA E +GFN
Sbjct: 27 KNQCYDEDGLPVDVPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMG 86
Query: 66 LSIPCDEFLFEDILLSLG 83
L+IPC+E +F + +G
Sbjct: 87 LTIPCEEVVFRSLTSMIG 104
>emb|CAE05452.3| OSJNBa0073E02.12 [Oryza sativa (japonica cultivar-group)]
gi|50926486|ref|XP_473190.1| OSJNBa0073E02.12 [Oryza
sativa (japonica cultivar-group)]
Length = 129
Score = 69.3 bits (168), Expect = 2e-11
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 15 LPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGF--NKSGPLSIPCDE 72
+PSDVPRGH V VGE RR+V+R L+HP+ +ELLD+A E Y F L IPCDE
Sbjct: 46 IPSDVPRGHTVVYVGEELRRYVVRVSSLDHPLFRELLDRAREEYQFAAGADARLCIPCDE 105
Query: 73 FLFEDIL 79
+F +L
Sbjct: 106 DIFLGVL 112
>gb|AAM62891.1| unknown [Arabidopsis thaliana]
Length = 160
Score = 69.3 bits (168), Expect = 2e-11
Identities = 32/73 (43%), Positives = 49/73 (66%)
Query: 7 KNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPL 66
+ C + P DVP+G+LAV VG RRF+I ++L+H + + LL++A E YGF+ SG L
Sbjct: 67 ETTCQSPESPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGAL 126
Query: 67 SIPCDEFLFEDIL 79
+IPC+ F+ +L
Sbjct: 127 TIPCEVETFKYLL 139
>gb|AAN65371.1| auxin-regulated protein [Phaseolus vulgaris]
Length = 156
Score = 68.9 bits (167), Expect = 3e-11
Identities = 33/77 (42%), Positives = 52/77 (66%)
Query: 3 CMWRKNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNK 62
C +++C + P DVP+G+LAV VG RRF+I YL+H + + LL++A E +GF++
Sbjct: 61 CDSDEDSCYSPQPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQ 120
Query: 63 SGPLSIPCDEFLFEDIL 79
SG L+IPC+ F+ +L
Sbjct: 121 SGGLTIPCEIETFKYLL 137
>emb|CAB86483.1| putative protein [Arabidopsis thaliana]
gi|15229222|ref|NP_189898.1| auxin-responsive
protein-related [Arabidopsis thaliana]
gi|11357851|pir||T47370 hypothetical protein F7M19.130 -
Arabidopsis thaliana
Length = 160
Score = 68.9 bits (167), Expect = 3e-11
Identities = 32/73 (43%), Positives = 49/73 (66%)
Query: 7 KNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPL 66
+ C + P DVP+G+LAV VG RRF+I ++L+H + + LL++A E YGF+ SG L
Sbjct: 67 ETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGAL 126
Query: 67 SIPCDEFLFEDIL 79
+IPC+ F+ +L
Sbjct: 127 TIPCEVETFKYLL 139
>dbj|BAC43209.1| unknown protein [Arabidopsis thaliana] gi|28372896|gb|AAO39930.1|
At5g20810 [Arabidopsis thaliana]
gi|30687983|ref|NP_197581.2| auxin-responsive protein,
putative / small auxin up RNA (SAUR_B) [Arabidopsis
thaliana]
Length = 165
Score = 68.9 bits (167), Expect = 3e-11
Identities = 32/73 (43%), Positives = 49/73 (66%)
Query: 7 KNACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPL 66
+ C + P DVP+G+LAV VG RRF+I YL+H + + LL++A E +GF++SG L
Sbjct: 67 EETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGAL 126
Query: 67 SIPCDEFLFEDIL 79
+IPC+ F+ +L
Sbjct: 127 TIPCEVETFKYLL 139
>dbj|BAD36439.1| auxin-induced protein-like [Oryza sativa (japonica cultivar-group)]
Length = 190
Score = 68.9 bits (167), Expect = 3e-11
Identities = 34/71 (47%), Positives = 45/71 (62%)
Query: 9 ACSGKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPLSI 68
+C + P+DVPRG+ V VG RRFVI YL HPV + LL++A E +GF G L+I
Sbjct: 90 SCQSPEPPADVPRGYCPVYVGPEQRRFVIPTRYLGHPVFRLLLEKAEEEFGFCHQGALAI 149
Query: 69 PCDEFLFEDIL 79
PC+ F+ IL
Sbjct: 150 PCETEAFKYIL 160
>gb|AAG14455.1| auxin-induced protein TGSAUR21 [Tulipa gesneriana]
Length = 107
Score = 68.9 bits (167), Expect = 3e-11
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 6 RKN-ACS--GKKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNK 62
RKN ACS G LP DVP+GH AV +GE RF++ L HP Q LL A E +GF+
Sbjct: 27 RKNGACSDKGHSLPLDVPKGHFAVYIGEKRSRFIVPISLLAHPEFQSLLRAAEEEFGFDN 86
Query: 63 SGPLSIPCDEFLFEDI 78
L+IPC+E +F +
Sbjct: 87 DMGLTIPCEEVVFRSL 102
>dbj|BAB02427.1| auxin-regulated protein-like [Arabidopsis thaliana]
gi|45773880|gb|AAS76744.1| At3g12830 [Arabidopsis
thaliana] gi|15230601|ref|NP_187889.1| auxin-responsive
family protein [Arabidopsis thaliana]
gi|44681346|gb|AAS47613.1| At3g12830 [Arabidopsis
thaliana]
Length = 132
Score = 68.2 bits (165), Expect = 4e-11
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 13 KKLPSDVPRGHLAVTVGETNRRFVIRADYLNHPVLQELLDQAYEGYGFNKSGPLSIPCDE 72
KK S VP GH+ V VG+ RFV+ A+ LNHPV LL+++ + YG+ + G L IPC
Sbjct: 44 KKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHV 103
Query: 73 FLFEDILLSL 82
+FE I+ SL
Sbjct: 104 LVFERIMESL 113
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.138 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,538,433
Number of Sequences: 2540612
Number of extensions: 8939810
Number of successful extensions: 17872
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 17670
Number of HSP's gapped (non-prelim): 179
length of query: 125
length of database: 863,360,394
effective HSP length: 101
effective length of query: 24
effective length of database: 606,758,582
effective search space: 14562205968
effective search space used: 14562205968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC139525.10