BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138453.14 - phase: 0
(1715 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 1108 0.0
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 1108 0.0
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 1104 0.0
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 1090 0.0
gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana] 1083 0.0
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 1082 0.0
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 1078 0.0
gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 1059 0.0
gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cult... 1041 0.0
gb|AAD20307.1| copia-type pol polyprotein [Zea mays] 1023 0.0
gb|AAC49502.1| Pol [Zea mays] gi|7489803|pir||T04112 pol protein... 1018 0.0
ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (jap... 1006 0.0
ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica... 1003 0.0
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 1002 0.0
ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultiva... 1002 0.0
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays] 988 0.0
gb|AAL35396.1| Opie2a pol [Zea mays] 981 0.0
emb|CAE04884.2| OSJNBa0042I15.6 [Oryza sativa (japonica cultivar... 943 0.0
gb|AAW57789.1| putative polyprotein [Oryza sativa (japonica cult... 930 0.0
ref|XP_468929.1| putative polyprotein [Oryza sativa (japonica cu... 918 0.0
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 1108 bits (2865), Expect = 0.0
Identities = 657/1701 (38%), Positives = 943/1701 (54%), Gaps = 174/1701 (10%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG D T + +L
Sbjct: 17 DGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
+ K + + + + ++ + AK L + EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDACEILKSTHEGTSKVKMSRLQLLATKFEN 136
Query: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
+MK++E I + + + + L + V KILRSLP R+ KVTAIEEA+D+
Sbjct: 137 LKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ V++L+ SL+ E+ L++ KKSK++A S E EE+ D D+
Sbjct: 197 CNMRVDELIGSLQTFELGLSDR-AEKKSKNLAFVSN------------DEGEEDEYDLDT 243
Query: 272 DEDQSVKIAMLSNKLEYLARKQKK----------FLSKKGSYKNSKKEDQKG-------C 314
DE + + +L + + + K F +KGS K K+ D K C
Sbjct: 244 DEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGS-KYQKRSDVKPSHSKGIQC 302
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEE 374
C+ GH IA+CP K+ KG S S D +SE SD
Sbjct: 303 HGCEGYGHIIAECPTHLKKHRKGLSVCQS-------------------DTESEQESD--- 340
Query: 375 ADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNEL 434
+D D A +G+ T +ED ++ S+I EL S ++L E +
Sbjct: 341 SDRDVNALIGIFET------------AEDSSDTDSEITFDELAASYRKLCIKSEKILQQE 388
Query: 435 TDLKEKYVDLMKQQKSTLLELKASEEELKG-FNLISTTYEDRLKSLCQKLQEKCDKGSGN 493
LK+ DL ++++ E+ ELKG +++ E+ KS+ + +KGS
Sbjct: 389 AQLKKVIADLEAEKEAHKEEIS----ELKGEVGFLNSKLENMTKSI-----KMLNKGSDT 439
Query: 494 KHEIALDDFIMAGIDRSKVVSMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLK 551
LD+ ++ G KN G +G+G++ + + ++
Sbjct: 440 -----LDEVLLLG--------------KNAGNQRGLGFNPKSAGRTTM------------ 468
Query: 552 STFVP-EGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVH 610
+ FVP + T Q + G Q K KS K + +
Sbjct: 469 TEFVPAKNRTGATMSQHRSRHHGMQQK--------------KSKRKKWRCHYCGK----- 509
Query: 611 QNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSW 670
IKP ++ S K + K K ++ L +H + A+E W
Sbjct: 510 YGHIKPFCYHLHGHPHHGTQSSNSRKKMMWVPKHKAVS----LVVHTSLRASAKE---DW 562
Query: 671 YLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSI-SINNVWLVDG 729
YLDSGCSRHMTG K L + V FG GKIIG G + + + S+N V LV G
Sbjct: 563 YLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKG 622
Query: 730 LKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVC 789
L NL+SISQ CD G++V F+K+ C LV + + KG R ++ + C
Sbjct: 623 LTANLISISQLCDEGFNVNFTKSEC-LVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTC 681
Query: 790 LLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFK 849
L S D+ +WH+R GH + R + KI V+G+PN+ +CG CQ GK VK S +
Sbjct: 682 LSSKEDEVRIWHQRFGHLHLRGMKKILDKSAVRGIPNLKIEEGRICGECQIGKQVKMSHQ 741
Query: 850 SKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFS 909
+TSR LELLH+DL GP+ SL G +Y V+VDD+SR+TWV FI+ K EVF
Sbjct: 742 KLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSGTFEVFK 801
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
++Q EK+ I ++RSDHG EFEN F FC GI HEFS+ TPQQNG+VERKNR
Sbjct: 802 KLSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNR 861
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TLQE AR M+H L + WAEA+NT+CYI NR+ +R T YE++KGR+P++ +FH
Sbjct: 862 TLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHI 921
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPG 1089
FG CYIL ++ +K D K+ GIFLGYS S+AY+V+NS T+ V ES++V DD P
Sbjct: 922 FGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPA 981
Query: 1090 SKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQN 1149
K + + + DA++S + N+E S+ ++
Sbjct: 982 RKKDVEEDVRTSGDNVADAAKSGE------------------------NAENSDSATDES 1017
Query: 1150 EIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPK 1209
I D +T + + HP+ELIIG + TRS + S +S IEPK
Sbjct: 1018 NINQPDKRSST--------RIQKMHPKELIIGDPNRGVTTRSREVEIVSNSCFVSKIEPK 1069
Query: 1210 TVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNK 1269
V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+P N+IGTKW+F+NK NE+G +TRNK
Sbjct: 1070 NVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNK 1129
Query: 1270 ARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEE 1329
ARLVAQGY+Q EG+D+ ETFAPVARLE+IRLLL A LYQMDV+SAFLNG + EE
Sbjct: 1130 ARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEE 1189
Query: 1330 VYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRR 1389
VYV+QP GF D HPDHVY+LKK+LYGLKQAPRAWY+RL+ FL + + +G +D TLF +
Sbjct: 1190 VYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVK 1249
Query: 1390 TLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGV 1449
++++I QIYVDDI+FG + + + F + MQ EFEMS++GEL +FLG+Q+ Q ++ +
Sbjct: 1250 QDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSI 1309
Query: 1450 YVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTAS 1509
++ Q++Y K ++KKF +E+ TP LSK++ GT VDQK YR MIGSLLYLTAS
Sbjct: 1310 FLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTAS 1369
Query: 1510 RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYA 1569
RPDI ++V +CAR+Q++P+ SHL VKRI +Y+ GT++ G++Y L+G+CDAD+A
Sbjct: 1370 RPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWA 1429
Query: 1570 GDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDY 1629
G +RKSTS C +LG NLISW SK+Q +++STAEAEYI+A S C+QL+WMK L++Y
Sbjct: 1430 GSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEY 1489
Query: 1630 QINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWA 1689
+ + + +YCDN +AI +SKNP+ HSR KHI+I+HH+IRD V ++ ++ +DTE Q A
Sbjct: 1490 NVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIA 1549
Query: 1690 DIFTKPLSVERFDFIKKNLNM 1710
DIFTK L +F+ ++ L +
Sbjct: 1550 DIFTKALDANQFEKLRGKLGI 1570
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 1108 bits (2865), Expect = 0.0
Identities = 658/1702 (38%), Positives = 944/1702 (54%), Gaps = 178/1702 (10%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG D T + +L
Sbjct: 17 DGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
+ K + + + + ++ + AK + L EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKISRLQLLATKFEN 136
Query: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
+MK++E I + + + + L + V KILRSLP R+ KVTAIEEA+D+
Sbjct: 137 LKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ V++L+ SL+ E+ L++ KKSK++A S E EE+ D ++
Sbjct: 197 CNMRVDELIGSLQTFELGLSDR-AEKKSKNLAFVSN------------DEGEEDEYDLNT 243
Query: 272 DEDQSVKIAMLSNKLEYLARKQKK----------FLSKKGSYKNSKKEDQKG-------C 314
DE + + +L + + + K F +KGS K KK D K C
Sbjct: 244 DEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGS-KYQKKSDVKPSHSKGIQC 302
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEE 374
C+ GH IA+CP K+ KG S S D +SE SD
Sbjct: 303 HGCEGYGHIIAECPTHLKKHRKGLSVCQS-------------------DTESEQESD--- 340
Query: 375 ADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNEL 434
+D D A G+ T +ED ++ S+I EL S ++L E +
Sbjct: 341 SDRDVNALTGIFET------------AEDSSDTDSEITFDELATSYRKLCIKSEKILQQE 388
Query: 435 TDLKEKYVDLMKQQKSTLLELKASEEELKG-FNLISTTYEDRLKSLCQKLQEKCDKGSGN 493
LK+ DL ++++ E+ ELKG +++ E+ KS+ + +KGS
Sbjct: 389 AQLKKVIADLEAEKEAHKEEIS----ELKGEVGFLNSKLENMTKSI-----KMLNKGSDT 439
Query: 494 KHEIALDDFIMAGIDRSKVVSMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLK 551
LD+ ++ G KN G +G+G++ + + ++
Sbjct: 440 -----LDEVLLLG--------------KNAGNQRGLGFNPKSAGRTTM------------ 468
Query: 552 STFVP-EGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVH 610
+ FVP + T Q + G Q K KS K + +
Sbjct: 469 TEFVPAKNRTGATMSQHRSRHHGMQQK--------------KSKRKKWRCHYCGK----- 509
Query: 611 QNLIKPES-KIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRS 669
IKP + ++ + +PK K +S+ LRA K+
Sbjct: 510 YGHIKPFCYHLHPHHGTQSSNSRKKMMWVPK---------HKAVSLVVHTSLRASAKE-D 559
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSI-SINNVWLVD 728
WYLDSGCSRHMTG K L + V FG GKIIG G + + + S+N V LV
Sbjct: 560 WYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVK 619
Query: 729 GLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVV 788
GL NL+SISQ CD G++V F+K+ C LV + + KG R ++ +
Sbjct: 620 GLTANLISISQLCDEGFNVNFTKSEC-LVTNEKSEVLMKGSRSKDNCYLWTPQETSYSST 678
Query: 789 CLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSF 848
CL S D+ +WH+R GH + R + KI V+G+PN+ +CG CQ GK VK S
Sbjct: 679 CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSH 738
Query: 849 KSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVF 908
+ +TSR LELLH+DL GP+ SL G +Y V+VDD+SR+TWVKFI+ K EVF
Sbjct: 739 QKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVKFIREKSETFEVF 798
Query: 909 SSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKN 968
++Q EK+ I ++RSDHG EFEN FC GI HEFS+ TPQQNG+VERKN
Sbjct: 799 KELSLRLQREKDCVIKRIRSDHGREFENSRLTEFCTSEGITHEFSAAITPQQNGIVERKN 858
Query: 969 RTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFH 1028
RTLQE AR M+H L + WAEA+NT+CYI NR+ +R T YE++KGR+P++ +FH
Sbjct: 859 RTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFH 918
Query: 1029 QFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREP 1088
FG CYIL ++ +K D K+ GIFLGYS S+AY+V+NS T+ V ES++V DD P
Sbjct: 919 IFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSP 978
Query: 1089 GSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQ 1148
K + + + DA++S + N+E S+ +
Sbjct: 979 ARKKDVEEDVRTSGDNVADAAKSGE------------------------NAENSDSATDE 1014
Query: 1149 NEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEP 1208
+ I D +T + + HP+ELIIG + TRS + S +S IEP
Sbjct: 1015 SNINQPDKRSST--------RIQKMHPKELIIGDPNRGVTTRSREVEIVSNSCFVSKIEP 1066
Query: 1209 KTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRN 1268
K V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+P N+IGTKW+F+NK NE+G +TRN
Sbjct: 1067 KNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRN 1126
Query: 1269 KARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEE 1328
KARLVAQGY+Q EG+D+ ETFAPVARLE+IRLLL A LYQMDV+SAFLNG + E
Sbjct: 1127 KARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNE 1186
Query: 1329 EVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFR 1388
EVYV+QP GF D HPDHVY+LKK+LYGLKQAPRAWY+RL+ FL + + +G +D TLF
Sbjct: 1187 EVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFV 1246
Query: 1389 RTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEG 1448
+ ++++I QIYVDDI+FG + + + F + MQ EFEMS++GEL +FLG+Q+ Q ++
Sbjct: 1247 KQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDS 1306
Query: 1449 VYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTA 1508
+++ Q++Y K ++KKF +E+ TP LSK++ GT VDQ LYR MIGSLLYLTA
Sbjct: 1307 IFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTA 1366
Query: 1509 SRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADY 1568
SRPDI ++V +CAR+Q++P+ SHLT VKRI +Y+ GT++ G++Y + L+G+CDAD+
Sbjct: 1367 SRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADW 1426
Query: 1569 AGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLED 1628
AG +RKSTS C +LG NLISW SK+Q +++STAEAEYI+A S C+QL+WMK L++
Sbjct: 1427 AGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKE 1486
Query: 1629 YQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQW 1688
Y + + + +YCDN +AI +SKNP+ HSR KHI+I+HH+IRD V ++ ++ +DTE Q
Sbjct: 1487 YNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQI 1546
Query: 1689 ADIFTKPLSVERFDFIKKNLNM 1710
ADIFTK L +F+ ++ L +
Sbjct: 1547 ADIFTKALDANQFEKLRGKLGI 1568
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 1104 bits (2856), Expect = 0.0
Identities = 655/1700 (38%), Positives = 938/1700 (54%), Gaps = 172/1700 (10%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG D T + +L
Sbjct: 17 DGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
+ K + + + + ++ + AK + L EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSRLQLLATKFEN 136
Query: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
+MK++E I + + + + L + V KILRSLP R+ KVTAIEEA+D+
Sbjct: 137 LKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ V++L+ SL+ E+ L++ KKSK++A S E EE+ D D+
Sbjct: 197 CNMRVDELIGSLQTFELGLSDR-AEKKSKNLAFVSN------------DEGEEDEYDLDT 243
Query: 272 DEDQSVKIAMLSNKLEYLARKQKK----------FLSKKGSYKNSKKEDQKG-------C 314
DE + + +L + + + K F +KGS K K+ D K C
Sbjct: 244 DEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGS-KYQKRSDVKPSHSKGIQC 302
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEE 374
C+ GH IA+CP K+ KG S S D +SE SD
Sbjct: 303 HGCEGYGHIIAECPTHLKKHRKGLSVCQS-------------------DTESEQESD--- 340
Query: 375 ADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNEL 434
+D D A G+ T +ED ++ S+I EL S ++L E +
Sbjct: 341 SDRDVNALTGIFET------------AEDSSDTDSEITFDELAASYRKLCIKSEKILQQE 388
Query: 435 TDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKGSGNK 494
LK+ DL ++++ E+ + E+ N T + +K L NK
Sbjct: 389 AQLKKVIADLEAEKEAHEEEISELKGEVGFLNSKLETMKKSIKML-------------NK 435
Query: 495 HEIALDDFIMAGIDRSKVVSMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLKS 552
LD+ ++ G KN G +G+G++ + + ++ +
Sbjct: 436 GSDTLDEVLLLG--------------KNAGNQRGLGFNPKFAGRTTM------------T 469
Query: 553 TFVP-EGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQ 611
FVP + T Q G+Q K KS K + +
Sbjct: 470 EFVPAKNRTGTTMSQHLSRHHGTQQK--------------KSKRKKWRCHYCGK-----Y 510
Query: 612 NLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWY 671
IKP ++ S K + K K ++ L +H + A+E WY
Sbjct: 511 GHIKPFCYHLHGHPHHGTQSSNSRKKMMWVPKHKAVS----LVVHTSLRASAKE---DWY 563
Query: 672 LDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSI-SINNVWLVDGL 730
LDSGCSRHMTG K L + V FG GKIIG G + + + S+N V LV GL
Sbjct: 564 LDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGL 623
Query: 731 KHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCL 790
NL+SISQ CD G++V F+K+ C LV + + KG R ++ + CL
Sbjct: 624 TANLISISQLCDEGFNVNFTKSEC-LVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCL 682
Query: 791 LSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKS 850
S D+ +WH+R GH + R + KI V+G+PN+ +CG CQ GK VK S +
Sbjct: 683 SSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQK 742
Query: 851 KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSS 910
+TSR LELLH+DL GP+ SL G +Y V+VDD+SR+TWV FI+ K EVF
Sbjct: 743 LRHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSETFEVFKE 802
Query: 911 FCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRT 970
++Q EK+ I ++RSDHG EFEN F FC GI HEFS+ TPQQNG+VERKNRT
Sbjct: 803 LSLRLQREKDCVIKRIRSDHGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNRT 862
Query: 971 LQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQF 1030
LQE AR M+H L + WAEA+NT+CYI NR+ +R T YE++KGR+P++ +FH F
Sbjct: 863 LQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIF 922
Query: 1031 GCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGS 1090
G CYIL ++ +K D K+ GIFLGYS S+AY+V+NS T+ V ES++V DD P
Sbjct: 923 GSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPAR 982
Query: 1091 KTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNE 1150
K + + + DA++S + N+E S+ ++
Sbjct: 983 KKDVEEDVRTLGDNVADAAKSGE------------------------NAENSDSATDESN 1018
Query: 1151 IASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKT 1210
I D +T + + HP+ELIIG + TRS + S +S IEPK
Sbjct: 1019 INQPDKRSST--------RIQKMHPKELIIGDPNRGVTTRSREVEIVSNSCFVSKIEPKN 1070
Query: 1211 VEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKA 1270
V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+P N+IGTKW+F+NK NE+G +TRNKA
Sbjct: 1071 VKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKA 1130
Query: 1271 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEV 1330
RLVAQGY+Q EG+D+ ETFAPVARLE+IRLLL A LYQMDV+SAFLNG + EEV
Sbjct: 1131 RLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEV 1190
Query: 1331 YVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRT 1390
YV+QP GF D HPDHVY+LKK+LYGLKQAPRAWY+RL+ FL + + +G +D TLF +
Sbjct: 1191 YVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQ 1250
Query: 1391 LKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVY 1450
++++I QIYVDDI+FG + + + F + MQ EFEMS++GEL +FLG+Q+ Q ++ ++
Sbjct: 1251 DAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIF 1310
Query: 1451 VHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASR 1510
+ Q++Y K ++KKF +E+ TP LSK++ GT VDQ LYR MIGSLLYLTASR
Sbjct: 1311 LSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASR 1370
Query: 1511 PDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAG 1570
PDI ++V +CAR+Q++P+ SHLT VKRI +Y+ GT++ G++Y + L+G+CDAD+AG
Sbjct: 1371 PDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAG 1430
Query: 1571 DRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQ 1630
+RKSTS C +LG NLISW SK+Q +++STAEAEYI+A S C+QL+WMK L++Y
Sbjct: 1431 SADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYN 1490
Query: 1631 INANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWAD 1690
+ + + +YCDN +AI +SKNP+ HSR KHI+I+HH+IRD V ++ ++ +DTE Q AD
Sbjct: 1491 VEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIAD 1550
Query: 1691 IFTKPLSVERFDFIKKNLNM 1710
IFTK L +F+ ++ L +
Sbjct: 1551 IFTKALDANQFEKLRGKLGI 1570
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 1090 bits (2820), Expect = 0.0
Identities = 650/1697 (38%), Positives = 946/1697 (55%), Gaps = 165/1697 (9%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG + T + +L
Sbjct: 17 DGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
+ K + + + + ++ + AK + L EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFEN 136
Query: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
+MK++E I + + + + L + V KILRSLP R+ KVTAIEEA+D+
Sbjct: 137 LKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ V++L+ SL+ E+ L++ T KKSK++A S E EE+ D D+
Sbjct: 197 CNMRVDELIGSLQTFELGLSDR-TEKKSKNLAFVSN------------DEGEEDEYDLDT 243
Query: 272 DEDQSVKIAMLSNK----LEYLARKQKKFLS------KKGSYKNSKKEDQ----KG--CF 315
DE + + L + L + R+QK + +KGS K +++ KG C
Sbjct: 244 DEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEKPSHSKGIQCR 303
Query: 316 NCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEA 375
C+ GH A+CP K++ KG S S +D +SE SD +
Sbjct: 304 GCEGYGHIKAECPTHLKKQRKGLSVCRS------------------DDTESEQESD---S 342
Query: 376 DDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELT 435
D D A G + +ED ++ S+I EL +EL E +
Sbjct: 343 DRDVNALTGRFES------------AEDSSDTDSEITFDELAIFYRELCIKSEKILQQEA 390
Query: 436 DLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKGSGNKH 495
LK+ +L ++++ E+ + E+ GF +++ E+ KS+ + +KGS
Sbjct: 391 QLKKVIANLEAEKEAHEEEISKLKGEV-GF--LNSKLENMTKSI-----KMLNKGSD--- 439
Query: 496 EIALDDFIMAGIDRSKVVSMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFV 555
LD+ + G KV + +G+G++ + + ++ + FV
Sbjct: 440 --MLDZVLQLG---KKVGNQ---------RGLGFNHKSAGRTTM------------TEFV 473
Query: 556 P-EGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQNLI 614
P + + T Q + G+Q K SK + + K I
Sbjct: 474 PAKNSTGATMSQHRSRHHGTQQK-RSKRKKWRCHYCGK------------------YGHI 514
Query: 615 KPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDS 674
KP ++S + + K K+++ L +H + A+E WYLDS
Sbjct: 515 KPFCYHLHGHPHHGTQGSSSGRKMMWVPKHKIVS----LVVHTSLRASAKE---DWYLDS 567
Query: 675 GCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSI-SINNVWLVDGLKHN 733
GCSRHMTG K + + V FG GKI G G + + + S+N V LV GL N
Sbjct: 568 GCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHEGLPSLNKVLLVKGLTVN 627
Query: 734 LLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSM 793
L+SISQ CD G++V F+K+ C LV + + KG R ++ + + CL S
Sbjct: 628 LISISQLCDEGFNVNFTKSEC-LVTNEKSEVLMKGSRSKDNCYLWTPQESSHSSTCLFSK 686
Query: 794 NDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDI 853
D+ +WH+R GH + R + KI V+G+PN+ +CG CQ GK VK S +
Sbjct: 687 EDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQH 746
Query: 854 VSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCT 913
+TSR LELLH+DL GP+ SL G +Y V+VDD+SR+TWV FI+ K EVF
Sbjct: 747 QTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSL 806
Query: 914 QIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQE 973
++Q EK+ I ++RSDHG EFEN F FC GI HEFS+ TPQQNG+VERKNRTLQE
Sbjct: 807 RLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQE 866
Query: 974 MARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCT 1033
AR M+H L + WAEA+NT+CYI NR+ +R T YE++KGR+P + +FH FG
Sbjct: 867 AARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHIFGSP 926
Query: 1034 CYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGSKTS 1093
CYIL ++ +K D K+ GIFLGYS S+AY+V+NS T+ V ES++V DD P K
Sbjct: 927 CYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKD 986
Query: 1094 EQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIAS 1153
+ + + D +D+ K E N+E S+ + I
Sbjct: 987 VEEDVR---------TSGDNVADTAKSAE---------------NAENSDSATDEPNINQ 1022
Query: 1154 EDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEE 1213
D +P + + HP+ELIIG + TRS + S +S IEPK V+E
Sbjct: 1023 PDK--------RPSIRIQKMHPKELIIGDPNRGVTTRSREIEIVSNSCFVSKIEPKNVKE 1074
Query: 1214 ALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLV 1273
AL+D+ WI AMQEEL QF+RN+VW+LVP+P N+IGTKW+F+NK NE+G +TRNKARLV
Sbjct: 1075 ALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLV 1134
Query: 1274 AQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVK 1333
AQGY+Q EG+D+ ETFAPVARLE+IRLLL A LYQMDV+SAFLNG + EE YV+
Sbjct: 1135 AQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVE 1194
Query: 1334 QPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKK 1393
QP GF D HPDHVY+LKK+LYGLKQAPRAWY+RL+ FL + + +G +D TLF + +
Sbjct: 1195 QPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAE 1254
Query: 1394 DILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQ 1453
+++I QIYVDDI+FG + + + F + MQ EFEMS++GEL +FLG+Q+ Q ++ +++ Q
Sbjct: 1255 NLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQ 1314
Query: 1454 TKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDI 1513
+KY K ++KKF +E+ TP LSK++ GT VDQ LYR MIGSLLYLTASRPDI
Sbjct: 1315 SKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDI 1374
Query: 1514 LFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRI 1573
++V +CAR+Q++P+ SHL VKRI +Y+ GT++ G++Y L+G+CDAD+AG
Sbjct: 1375 TYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSAD 1434
Query: 1574 ERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINA 1633
+RKSTS C +LG NLISW SK+Q +++STAEAEYI+A S C+QL+WMK L++Y +
Sbjct: 1435 DRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQ 1494
Query: 1634 NSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFT 1693
+ + +YCDN +AI +SKNP+ HSR KHI+I+HH+IR+ V ++ ++ +DTE Q ADIFT
Sbjct: 1495 DVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFT 1554
Query: 1694 KPLSVERFDFIKKNLNM 1710
K L ++F+ ++ L +
Sbjct: 1555 KALDAKQFEKLRGKLGI 1571
>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
Length = 1643
Score = 1083 bits (2802), Expect = 0.0
Identities = 636/1698 (37%), Positives = 938/1698 (54%), Gaps = 106/1698 (6%)
Query: 41 FSWWKTNMYSFIMGLDEELWDIL-----------EDGVDDLDLDEEGAAIDRRIHTPAQK 89
+ WK M + I GL +E W E+G D L +++ T A++
Sbjct: 21 YGHWKVKMRALIRGLGKEAWIATSVGWKAPVVKGENGEDVLKTEDQW--------TDAEE 72
Query: 90 KLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQY 149
+ + +I S+ + ++ ++ + +AK + L +EG+ VK ++ ML Q+
Sbjct: 73 AKATANSRALSLIFNSVNQNQFKRIQNCESAKEAWDKLAKAYEGTSSVKRSRIDMLASQF 132
Query: 150 ELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAK 209
E M + E+IEE + + S L K Y V K+LR LPSR+ K TA+ +
Sbjct: 133 ENLTMDESENIEEFSGKISAIASEAHNLGKKYKDKKLVKKLLRCLPSRFESKRTAMGTSL 192
Query: 210 DLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEE--ESP 267
D +T+ E++V L+ +E+ + KG SK +SE E E
Sbjct: 193 DTDTIDFEEVVGMLQAYELEITS-------------GKGGYSKGVALAVSSEKNEIQELK 239
Query: 268 DGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADC 327
D S ++ AM + AR Q + + K + C C+ GH A+C
Sbjct: 240 DSMSMMAKNFSRAMKRVEKRGFARNQGSDRDRDRDRDRNSKRSEIQCHECQGYGHIKAEC 299
Query: 328 PDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGLVA 387
P L+++ K S+ +KF KS +S+S SD E++++D K V V
Sbjct: 300 PSLKRKDLKC-SECRGIGHTKFDCIGSKSKPDRSYIAESDSDSDDEDSEEDVKGFVSFVG 358
Query: 388 TVSSEAVSEAESDSE---DENEVYSKIPRQELVDSLKELLSLFEH---RTNELTDLKEKY 441
+ + VS SDSE ++ E+ + +D E L+E+ + E E+
Sbjct: 359 IIEDDNVSSDSSDSEVGCEKEEISADDESDVEMDVDGEFRKLYENWLVLSKEKVIWLEEK 418
Query: 442 VDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDK-GSGNKHEIALD 500
V + +Q + EL + + L + E++ + L Q L + K NK LD
Sbjct: 419 VKVQEQIEQLKGELAVANQIKSEMILKYSAKEEKNRELSQDLSDTRKKIHMLNKGTKDLD 478
Query: 501 DFIMAG-IDRSKVVSMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGT 559
+ AG + +S G+GY S K+ FV
Sbjct: 479 SILAAGRVGKSNF-------------GLGYHGGGSST--------------KTNFVRSKA 511
Query: 560 NAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQNLIKPESK 619
A T QS + + K +N ++ + R + + + ++
Sbjct: 512 AAPTQSQSVFRSKSNSVPARRKYQNQN-HYHSQRTVTGYECYYCGRHGHIQRYCYRYAAR 570
Query: 620 IPKQKDQKNKAATASEKTIP-KGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDSGCSR 678
+ K K Q K P +G K+ ++ L H A ++ WY DSG SR
Sbjct: 571 LSKLKRQG--------KLYPHQGRNSKMYVRREDLYCHVAYTSIAEGVKKPWYFDSGASR 622
Query: 679 HMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSIS-INNVWLVDGLKHNLLSI 737
HMTG +A + V FGG G+I G G + + + NV+ V+GL NL+S+
Sbjct: 623 HMTGSQANLNNYSSVKESNVMFGGGAKGRIKGKGDLTETEKPHLTNVYFVEGLTANLISV 682
Query: 738 SQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDKK 797
SQ CD G V+F+K C N+ +++ + N Y + ++ +CL + +
Sbjct: 683 SQLCDEGLTVSFNKVKCWATNERNQNTLTGVRTGNNCY------MWEEPKICLRAEKEDP 736
Query: 798 WVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTS 857
+WH+RLGH N R +SK+ ++V+G+P + + +CGAC +GK ++ K + + T+
Sbjct: 737 VLWHQRLGHMNARSMSKLVNKEMVRGVPELKHIEKIVCGACNQGKQIRVQHKRVEGIQTT 796
Query: 858 RPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQS 917
+ L+L+H+DL GP+ T S+ G +Y V+VDD+SR+ WV+FI+ K F Q+++
Sbjct: 797 QVLDLIHMDLMGPMQTESIAGKRYVFVLVDDFSRYAWVRFIREKSETANSFKILALQLKN 856
Query: 918 EKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMART 977
EK++ I ++RSD GGEF NE F FCE GI H++S+PRTPQ NGVVERKNRTLQEMAR
Sbjct: 857 EKKMGIKQIRSDRGGEFMNEAFNSFCESQGIFHQYSAPRTPQSNGVVERKNRTLQEMARA 916
Query: 978 MIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYIL 1037
MIH N + + FWAEA++T+CY+ NR+Y+R +KT YE++KG++PN+SYF FGC CYI+
Sbjct: 917 MIHGNGVPEKFWAEAISTACYVINRVYVRLGSDKTPYEIWKGKKPNLSYFRVFGCVCYIM 976
Query: 1038 NTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDR---EPGSKTSE 1094
N KD L KFD++++ G FLGY+ S AY+V+N + +EESM+V FDD E
Sbjct: 977 NDKDQLGKFDSRSEEGFFLGYATNSLAYRVWNKQRGKIEESMNVVFDDGSMPELQIIVRN 1036
Query: 1095 QSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASE 1154
++E +++ +D D+ +I E + E P ++V + AS+
Sbjct: 1037 RNEPQTSISNNHGEERNDNQFDN-----------GDINKSGEESDEEVPPAQVHRDHASK 1085
Query: 1155 DFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIG-LLSIIEPKTVEE 1213
D + + + + G K R S EE + +SI+EPK V+E
Sbjct: 1086 DIIGDPSG---ERVTRGVKQDYRQLAGIKQKHRVMASFACFEEIMFSCFVSIVEPKNVKE 1142
Query: 1214 ALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLV 1273
AL D WILAM+EEL +F R+ VWDLVP+P Q N+IGTKW+F+NK +E G +TRNKARLV
Sbjct: 1143 ALEDHFWILAMEEELEEFSRHQVWDLVPRPPQVNVIGTKWIFKNKFDEVGNITRNKARLV 1202
Query: 1274 AQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVK 1333
AQGY+Q EG+D+ ETFAPVARLE IR LL A G L+QMDV+ AFLNG+IEEEVYV+
Sbjct: 1203 AQGYTQVEGLDFDETFAPVARLECIRFLLGTACGMGFKLHQMDVKCAFLNGIIEEEVYVE 1262
Query: 1334 QPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKK 1393
QP GFE+L+ P++VYKLKK+LYGLKQAPRAWY+RL+ FLI + RG VD TLF +
Sbjct: 1263 QPKGFENLEFPEYVYKLKKALYGLKQAPRAWYERLTTFLIVQGYTRGSVDKTLFVKNDVH 1322
Query: 1394 DILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQ 1453
I+I+QIYVDDI+FG T+ L K F K M EF MSM+GELK+FLG+QINQ+ EG+ + Q
Sbjct: 1323 GIIIIQIYVDDIVFGGTSDKLVKTFVKTMTTEFRMSMVGELKYFLGLQINQTDEGITISQ 1382
Query: 1454 TKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDI 1513
+ Y + L+K+F + K TPM T L K++ G VD+KLYRGMIGSLLYLTA+RPD+
Sbjct: 1383 STYAQNLVKRFGMCSSKPAPTPMSTTTKLFKDEKGVKVDEKLYRGMIGSLLYLTATRPDL 1442
Query: 1514 LFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRI 1573
SV LCAR+QS+P+ SHL AVKRI +Y+ GT N GL Y + L+G+CDAD+ G+
Sbjct: 1443 CLSVGLCARYQSNPKASHLLAVKRIIKYVSGTINYGLNYTRDTSLVLVGYCDADWGGNLD 1502
Query: 1574 ERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQIN- 1632
+R+ST+ FLG NLISW SK+Q +++S+ ++EYI+ SCCTQLLWM+ DY +
Sbjct: 1503 DRRSTTGGVFFLGSNLISWHSKKQNCVSLSSTQSEYIALGSCCTQLLWMRQMGLDYGMTF 1562
Query: 1633 ANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIF 1692
+ + + CDN +AI +SKNP+ HS KHI I+HHF+R+ V++ + ++ + TE Q DIF
Sbjct: 1563 PDPLLVKCDNESAIAISKNPVQHSVTKHIAIRHHFVRELVEEKQITVEHVPTEIQLVDIF 1622
Query: 1693 TKPLSVERFDFIKKNLNM 1710
TKPL + F ++K+L +
Sbjct: 1623 TKPLDLNTFVNLQKSLGI 1640
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 1082 bits (2797), Expect = 0.0
Identities = 658/1713 (38%), Positives = 942/1713 (54%), Gaps = 188/1713 (10%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG + T + +L
Sbjct: 17 DGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAK-AMFASLCANFEGSKKVKEAKALMLVHQYE 150
+ K + + + + ++ + AK A L EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDACGEILKTTHEGTSKVKMSRLQLLATKFE 136
Query: 151 LFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKD 210
+MK++E I + + + + L + V KILRSLP R+ KVTAIEEA+D
Sbjct: 137 NLKMKEEECIHDFHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQD 196
Query: 211 LNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGD 270
+ + V++L+ SL+ E+ L++ KKSK++A S E EE+ D D
Sbjct: 197 ICNMRVDELIGSLQTFELGLSDRN-EKKSKNLAFVSN------------DEGEEDEYDLD 243
Query: 271 SDEDQSVKIAMLSNK----LEYLARKQKK------FLSKKGSYKNSKKEDQ----KG--C 314
+DE + + +L + L + R+QK F +KGS + K +++ KG C
Sbjct: 244 TDEGLTNAVGLLGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSEYHKKSDEKPSHSKGIQC 303
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEE 374
C+ GH A+CP K++ KG S S +D +SE SD
Sbjct: 304 HGCEGYGHIKAECPTHLKKQRKGLSVCRS------------------DDTESEQESD--- 342
Query: 375 ADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNEL 434
+D D A G E++ DS D +I EL S ++L E +
Sbjct: 343 SDRDVNALTGRF---------ESDEDSSD-----IEITFDELAISYRKLCIKSEKILQQE 388
Query: 435 TDLKEKYVDLMKQQKSTLLELKASEEELKG-FNLISTTYEDRLKSLCQKLQEKCDKGSGN 493
LK+ +L ++++ E+ ELKG +++ E+ KS+ + +KGS
Sbjct: 389 AQLKKVIANLEAEKEAHEEEIS----ELKGEVGFLNSKLENMTKSI-----KMLNKGSD- 438
Query: 494 KHEIALDDFIMAGIDRSKVVSMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLK 551
LD+ + G KN G +G+G++ + + ++
Sbjct: 439 ----MLDEVLQLG--------------KNVGNQRGLGFNHKSACRITM------------ 468
Query: 552 STFVP-EGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVH 610
+ FVP + + T Q + G+Q K KS K + +
Sbjct: 469 TEFVPAKNSTGATMSQHRSRHHGTQQK--------------KSKRKKWRCHYCGK----- 509
Query: 611 QNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSW 670
IKP +++S + + K K+++ L +H + A+E W
Sbjct: 510 YGHIKPFCYHLHGHPHHGTQSSSSGRKMMWVPKHKIVS----LVVHTSLRASAKE---DW 562
Query: 671 YLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSI-SINNVWLVDG 729
YLDSGCSRHMTG K + + V FG GKI G G + + + S+N V LV G
Sbjct: 563 YLDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLLVKG 622
Query: 730 LKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVC 789
L NL+SISQ CD G++V F+K+ C LV + + KG R ++ + C
Sbjct: 623 LTANLISISQLCDEGFNVNFTKSEC-LVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTC 681
Query: 790 LLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFK 849
L S D+ +WH+R GH + R + KI V+G+PN+ +CG CQ GK VK S +
Sbjct: 682 LSSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQ 741
Query: 850 SKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFS 909
+TS LELLH+DL GP+ SL G +Y V+VDD+SR+TWV FI+ K EVF
Sbjct: 742 KLQHQTTSMVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVFK 801
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
++Q EK+ I ++RSDHG EFEN F FC GI HEFS+ TPQQNG+VERKNR
Sbjct: 802 ELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNR 861
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TLQE R M+H L + WAEA+NT+CYI NR+ +R T YE++KGR+P + +FH
Sbjct: 862 TLQEATRVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHI 921
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPG 1089
FG CYIL ++ +K D K+ GIFLGYS S+AY+V+NS T+ V ES++V DD P
Sbjct: 922 FGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPA 981
Query: 1090 SKTSEQ-----SESNAGTT--DSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAE 1142
K + SE N T +E+A +SD +D + + SP I
Sbjct: 982 RKKDVEEDVRTSEDNVADTAKSAENAEKSDSTTDEPNINQPDKSPFIRI----------- 1030
Query: 1143 PSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGL 1202
Q +QPK ELIIG + TRS + S
Sbjct: 1031 -------------------QKMQPK---------ELIIGDPNRGVTTRSREIEIVSNSCF 1062
Query: 1203 LSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQ 1262
+S IEPK V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+P N+IGTKW+F+NK NE+
Sbjct: 1063 VSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEE 1122
Query: 1263 GEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFL 1322
G +TRNKARLVAQGY+Q EG+D+ ETFAPVARLE+IRLLL A LYQMDV+SAFL
Sbjct: 1123 GVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFL 1182
Query: 1323 NGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQV 1382
NG + EE YV+QP GF D H DHVY+LKK+LYGLKQAPRAWY+RL+ FL + + +G +
Sbjct: 1183 NGYLNEEAYVEQPKGFVDPTHLDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGI 1242
Query: 1383 DTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQI 1442
D TLF + ++++I QIYVDDI+FG + + + F MQ EFEMS++GEL +FLG+Q+
Sbjct: 1243 DKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVPQMQSEFEMSLVGELHYFLGLQV 1302
Query: 1443 NQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGS 1502
Q ++ +++ Q+KY K ++KKF +E+ TP LSK++ GT VDQ LYR MIGS
Sbjct: 1303 KQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQNLYRSMIGS 1362
Query: 1503 LLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIG 1562
LLYLTASRPDI F+V +CAR+Q++P+ SHL VKRI +Y+ GT++ G++Y D L+G
Sbjct: 1363 LLYLTASRPDITFAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVG 1422
Query: 1563 FCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWM 1622
+CDAD+AG +RK TS C +LG NLISW SK+Q +++STAEAEYI+A S C+QL+WM
Sbjct: 1423 YCDADWAGSADDRKCTSGGCFYLGTNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWM 1482
Query: 1623 KHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFI 1682
K L++Y + + + +YCDN +AI +SKNP+ H+R KHI+I+HH+IRD V I+ ++ +
Sbjct: 1483 KQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHNRTKHIDIRHHYIRDLVDDKIITLEHV 1542
Query: 1683 DTEHQWADIFTKPLSVERFDFIKKNLNMHFVSD 1715
DTE Q ADIFTK L +F+ ++ L + D
Sbjct: 1543 DTEEQVADIFTKALDANQFEKLRGKLGTCLLED 1575
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 1078 bits (2789), Expect = 0.0
Identities = 652/1695 (38%), Positives = 936/1695 (54%), Gaps = 173/1695 (10%)
Query: 48 MYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKLYKKHHKIRGII 102
M +F+ LD W + G + LD EG + T + +L + K +
Sbjct: 1 MVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDELALGNSKALNAL 60
Query: 103 VASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEE 162
+ + + ++ + AK + L EG+ KVK ++ +L ++E +MK++E I E
Sbjct: 61 FNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEECIHE 120
Query: 163 MYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSS 222
+ + + L + V KILRSLP R+ KVTAIEEA+D+ + V++L+ S
Sbjct: 121 FHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGS 180
Query: 223 LKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKIAML 282
L+ E+ L++ T KKSK++A S E EE+ D D+DE + + +L
Sbjct: 181 LQTFELGLSDR-TEKKSKNLAFVSN------------DEGEEDEYDLDTDEGLTNAVVLL 227
Query: 283 SNK----LEYLARKQKK------FLSKKGSYKNSKKEDQKG-------CFNCKKPGHFIA 325
+ L + R+QK F +KGS + K+ D+K C C+ GH A
Sbjct: 228 GKQFNKVLNRMDRRQKPHVRNIPFDIRKGS-EYQKRSDEKPSHSKGIQCHGCEGYGHIKA 286
Query: 326 DCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGL 385
+CP K++ KG S S +D +SE SD +D D A G
Sbjct: 287 ECPTHLKKQRKGLSVCRS------------------DDTESEQESD---SDRDVNALTGR 325
Query: 386 VATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLM 445
+ +ED ++ S+I EL S +EL E + LK+ +L
Sbjct: 326 FES------------AEDSSDTDSEITFDELAISYRELCIKSEKILQQEAQLKKVIANLE 373
Query: 446 KQQKSTLLELKASEEELKG-FNLISTTYEDRLKSLCQKLQEKCDKGSGNKHEIALDDFIM 504
++++ E+ ELKG +++ E+ KS+ + +KGS LD+ +
Sbjct: 374 AEKEAHEDEIS----ELKGEIGFLNSKLENMTKSI-----KMLNKGSD-----LLDEVLQ 419
Query: 505 AGIDRSKVVSMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVP-EGTNA 561
G KN G +G+G++ + + ++ + FVP + +
Sbjct: 420 LG--------------KNVGNQRGLGFNHKSAGRTTM------------TEFVPAKNSTG 453
Query: 562 ITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQNLIKPESKIP 621
T Q + G+Q K KS K + + IKP
Sbjct: 454 ATMSQHRSRHHGTQQK--------------KSKRKKWRCHYCGK-----YGHIKPFCYHL 494
Query: 622 KQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDSGCSRHMT 681
+++S G K + K +S+ LRA K+ WYLDSGCSRHMT
Sbjct: 495 HGHPHHGTQSSSS------GRKMMWVPKHKTVSLVVHTSLRASAKE-DWYLDSGCSRHMT 547
Query: 682 GEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSI-SINNVWLVDGLKHNLLSISQF 740
G K + + V FG GKI G G + + + S+N V LV GL NL+SISQ
Sbjct: 548 GVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLLVKGLTANLISISQL 607
Query: 741 CDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDKKWVW 800
CD G++V F+K+ C LV + + KG R ++ + CL S D+ +W
Sbjct: 608 CDEGFNVNFTKSEC-LVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLFSKEDEVKIW 666
Query: 801 HKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPL 860
H+R GH + R + KI V+G+PN+ +CG CQ GK VK S + +TSR L
Sbjct: 667 HQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSNQKLQHQTTSRVL 726
Query: 861 ELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKE 920
ELLH+DL GP+ SL +Y V+VDD+SR+TWV FI+ K EVF ++Q EK+
Sbjct: 727 ELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKD 786
Query: 921 LKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIH 980
I ++RSDHG EFEN F FC GI HEFS+ TPQQNG+VERKNRTLQE AR M+H
Sbjct: 787 CVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLH 846
Query: 981 ENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILNTK 1040
L + WAEA+NT+CYI NR+ +R T YE++KGR+P + +FH G CYIL +
Sbjct: 847 AKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHICGSPCYILADR 906
Query: 1041 DYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGSKTSEQSESNA 1100
+ +K D K+ GIFLGYS S+AY+V+NS T+ V ES++V DD P K + +
Sbjct: 907 EQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDVR- 965
Query: 1101 GTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDFLDNT 1160
+ D +D+ K E N+E S+ + I D
Sbjct: 966 --------TSGDNVADTAKSAE---------------NAENSDSATDEPNINQPDK---- 998
Query: 1161 QQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGW 1220
+P + + HP+ELIIG + TRS + S +S IEPK V+EAL+D+ W
Sbjct: 999 ----RPSIRIQKMHPKELIIGDPNRGVTTRSREIEIISNSCFVSKIEPKNVKEALTDEFW 1054
Query: 1221 ILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQ 1280
I AMQEEL QF+RN+VW+LVP+P N+IGTKW+F+NK NE+G +TRNKARLVAQGY+Q
Sbjct: 1055 INAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQI 1114
Query: 1281 EGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFED 1340
EG+D+ ETFAP ARLE+IRLLL A LYQMDV+SAFLNG + EE YV+QP GF D
Sbjct: 1115 EGVDFDETFAPGARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVD 1174
Query: 1341 LKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQI 1400
HPDHVY+LKK+LYGLKQAPRAWY+RL+ FL + + +G +D TLF + ++++I QI
Sbjct: 1175 PTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQI 1234
Query: 1401 YVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKEL 1460
YVDDI+FG + + + F + MQ EFEMS++GEL +FLG+Q+ Q ++ +++ Q+KY K +
Sbjct: 1235 YVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNI 1294
Query: 1461 LKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLC 1520
+KKF +E+ TP LSK++ GT VDQ LYR MIGSLLYLTASRPDI ++V C
Sbjct: 1295 VKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGGC 1354
Query: 1521 ARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSE 1580
AR+Q++P+ SHL VKRI +Y+ GT++ G++Y D L+G+CDAD+AG +RKST
Sbjct: 1355 ARYQANPKISHLNQVKRILKYVNGTSDYGIMYCHCSDSMLVGYCDADWAGSVDDRKSTFG 1414
Query: 1581 NCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYC 1640
C +LG N ISW SK+Q +++STAEAEYI+A S C+QL+WMK L++Y + + + +YC
Sbjct: 1415 GCFYLGTNFISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYC 1474
Query: 1641 DNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVER 1700
DN +AI +SKNP+ HSR KHI+I+HH+IRD V ++ ++ +DTE Q ADIFTK L +
Sbjct: 1475 DNLSAINISKNPVQHSRTKHIDIRHHYIRDLVDDKVITLEHVDTEEQIADIFTKALDANQ 1534
Query: 1701 FDFIKKNLNMHFVSD 1715
F+ ++ L + + D
Sbjct: 1535 FEKLRGKLGICLLED 1549
>gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902324|ref|NP_912508.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2011
Score = 1059 bits (2738), Expect = 0.0
Identities = 655/1708 (38%), Positives = 929/1708 (54%), Gaps = 161/1708 (9%)
Query: 29 GKAPKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQ 88
GKAP FNG +S WK M + + + +W I++ G AI T
Sbjct: 9 GKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVDVGF----------AITGTPLTEID 56
Query: 89 KKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQ 148
+ K + + ++ S+ + E+ ++S+ TA ++ L E + + K+AK L Q
Sbjct: 57 HRNLKLNAQAMNVLFNSLSQEEFDRVSNLETAYEIWNKLAEIHESTSEYKDAKLHFLKIQ 116
Query: 149 YELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEA 208
YE F M ES+ +MY R +V+ L+ L +Y + K+LR+LP ++ VT + +
Sbjct: 117 YETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTNLEVAQKMLRALPEKYETLVTMLINS 176
Query: 209 KDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPD 268
D++ ++ L+ + ++M ++ KK A PSK I+ ++ S+S+ +
Sbjct: 177 -DMSRMTPASLLGKINTNDM----YKLKKKEMEEASPSKKCIALQAEVEDKSKSKVNEVN 231
Query: 269 GDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKG-------CFNCKKPG 321
D +E+ I +L+ + L ++K+ +GS N ++ + CF C
Sbjct: 232 KDLEEE----IVLLARRFNDLLGRRKE--RGRGSNSNRRRNRRPNKTLSNLRCFEC---- 281
Query: 322 HFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKA 381
D +E + K+ K +++A E A
Sbjct: 282 -------DSNEESSASSGSEEEGGDDASSKKKKMAVVAIKEA-------------PSLFA 321
Query: 382 AVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKY 441
+ L+A S+ S ++S+S+D+ + S EL+S+FE EL EK
Sbjct: 322 PLCLMAKSPSKVTSLSDSESDDDCDDVS----------YDELVSMFE----ELHAYSEKE 367
Query: 442 VDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKGSGNKHEIALDD 501
+ K K L+ EELK T +RL +KL+E D AL D
Sbjct: 368 IIKFKTLKKDHASLEVLYEELK-------TSHERLTISHEKLKEAHDNLLSTTQHGALID 420
Query: 502 FIMAGIDRSKVVSMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNA 561
+G S CD + D +++
Sbjct: 421 -------------------------VGIS------------CDLLDDSATCHIAHVASSS 443
Query: 562 ITA----VQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQNLIKPE 617
I+ + P +S S ++ +L V+ ++ K Q K+ K E + +
Sbjct: 444 ISTSCDDLMDMPNSSSSSC-VSICDASL---VVENNELKEQVAKLNKSLERCFKGKNTLD 499
Query: 618 SKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQR--------- 668
+ +Q+ NK + KG KP + + + K C + RE
Sbjct: 500 KILSEQQCILNKEGLGF--ILKKGKKPSH-RATRFVKSNGKYCSKCREVGHLVNYRTGGS 556
Query: 669 SWYLDSGCSRHMTGEKALFLTLTM--KDGGEVKFGGNQTGKIIGTGTIGNSS-ISINNVW 725
W LDSGC++HMTG++A+F T + + +V FG N GK+IG G I S+ +SI+NV
Sbjct: 557 HWVLDSGCTQHMTGDRAMFTTFEVGGNEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNVS 616
Query: 726 LVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQ 785
LV L NLLS++Q CD F + + DKS FKG R N+Y +F+
Sbjct: 617 LVKSLNFNLLSVAQICDLVLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYLGDFNSSEAN 676
Query: 786 KVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVK 845
CL++ W+WH+RL H +SK+SK LV GL ++ + D LC ACQ GK V
Sbjct: 677 LKTCLVAKTSLGWLWHRRLAHVGMNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGKQVA 736
Query: 846 SSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYAC 905
S +K I+STSRPLELLH++ FGP S+ G+ + LVIVDDYSR+TW+ F+ K
Sbjct: 737 CSHPTKSIMSTSRPLELLHMEFFGPTTYKSIGGNSHCLVIVDDYSRYTWMFFLHDKSIVA 796
Query: 906 EVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVE 965
E+F F + Q+E ++K+RSD+G +F+N E +C+ GI HE S+ +PQQNGVVE
Sbjct: 797 ELFKKFAKRGQNEFNCTLVKIRSDNGSKFKNTNIEDYCDDLGIKHELSATYSPQQNGVVE 856
Query: 966 RKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNIS 1025
KNRTL EMARTM+ E ++ FWAEA+NT+C+ NR+Y+ +L+KT+YEL GR+PN++
Sbjct: 857 MKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRLLKKTSYELIVGRKPNVA 916
Query: 1026 YFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDD 1085
YF FGC CYI L KF+++ G LGY+ SKAY+VYN VEE+ V+FD+
Sbjct: 917 YFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIVEETADVQFDE 976
Query: 1086 REPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSS 1145
GS+ ++ + G A ++ D K EVE P + + E ++ A P S
Sbjct: 977 TN-GSQEGHENLDDVGDEGLMRAMKNMSIGDVKP-IEVEDKPST--STQDEPSTSATP-S 1031
Query: 1146 KVQNEIASEDFLDNTQQVIQPKFKH---KSSHPEELIIGSKDSPRRTRSHFRQEESLIGL 1202
+ Q E+ E Q + P H HP + ++G +TRS
Sbjct: 1032 QAQVEVEEE----KAQDLPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVASICEHYSF 1087
Query: 1203 LSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQ 1262
+S +EPK V+EAL D WI AM +ELN F RN VW LV + N+IGTKWVFRNK +E
Sbjct: 1088 VSCLEPKHVDEALCDPDWINAMHKELNNFARNKVWTLVERLRDHNVIGTKWVFRNKQDEN 1147
Query: 1263 GEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFL 1322
G V RNKAR VAQG++Q EG+D+ ETFAPV RLEAI +LL++A I L+QMDV+SAFL
Sbjct: 1148 GLVVRNKARFVAQGFTQVEGLDFGETFAPVTRLEAICILLAFASCFNIKLFQMDVKSAFL 1207
Query: 1323 NGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQV 1382
NG I E V+V+QPPGFED K+P+HVYKL K+LYGLKQAPRAWY+RL +FL+ DF+ G+V
Sbjct: 1208 NGEIAELVFVEQPPGFEDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKV 1267
Query: 1383 DTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQI 1442
DTTLF + + D + QIYVDDIIFG TN CKEF +M EFEMSM+GEL FF G+QI
Sbjct: 1268 DTTLFTKIIGDDFFVCQIYVDDIIFGCTNEVFCKEFGDMMSREFEMSMIGELSFFHGLQI 1327
Query: 1443 NQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGS 1502
Q K+G F LED K + TPM L ++ G VD KLYR MIGS
Sbjct: 1328 KQLKDGT--------------FGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGS 1373
Query: 1503 LLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIG 1562
LLYLTASRPDI+FSVC+CARFQ+ P+E HL AVKRI RYLK ++ +GL Y K +KL+G
Sbjct: 1374 LLYLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVG 1433
Query: 1563 FCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWM 1622
+ D+DYAG +++RKSTS +CQ LG +L+SW+SK+Q +A+ AEAEY+SA SCC QLLWM
Sbjct: 1434 YSDSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNFVALFIAEAEYVSAGSCCAQLLWM 1493
Query: 1623 KHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFI 1682
K L DY I+ P+ C+N +AI ++ NP+ HSR KHI+I+HHF+RD+V K + I I
Sbjct: 1494 KQILLDYGISFTKTPLLCENDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHI 1553
Query: 1683 DTEHQWADIFTKPLSVERFDFIKKNLNM 1710
TE Q ADIFTKPL RF ++ LN+
Sbjct: 1554 RTEDQLADIFTKPLDETRFCKLRNELNL 1581
>gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1577
Score = 1041 bits (2692), Expect = 0.0
Identities = 653/1702 (38%), Positives = 912/1702 (53%), Gaps = 160/1702 (9%)
Query: 29 GKAPKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDG--VDDLDLDEEGAAIDRR---I 83
GKAP FNG +S WK M + + + +W I++ G + L E ID R +
Sbjct: 9 GKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVDVGFAITGTPLME----IDHRNLQL 62
Query: 84 HTPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL 143
+ A L+ S+ + E+ ++S+ TA ++ L EG+ + K+AK
Sbjct: 63 NAQAMNALFN-----------SLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLH 111
Query: 144 MLVHQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVT 203
L QYE F M ES+ +MY R +V+ L+ L +Y + K+LR+LP ++ VT
Sbjct: 112 FLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVT 171
Query: 204 AIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESE 263
+ + D++ ++ L+ + N ++ K+ +GK S S++
Sbjct: 172 MLINS-DMSRMTPASLLGKI-------NTNDMRKE--------RGKGSNSNRRRN----- 210
Query: 264 EESPDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHF 323
R+ K LS CF C + GHF
Sbjct: 211 ---------------------------RRPNKTLSNLR------------CFECGEKGHF 231
Query: 324 IADCPDLQKEKFKGKSKKSS-FNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAA 382
+ CP + K KKS + K K+ K + A E+ DS S
Sbjct: 232 ASKCPSKDDDGDKSSKKKSGGYKLMKKLKKEGKKIEAFIEEWDSNEESSPHPGPRKKMVM 291
Query: 383 VGLVATVSSEAVSEAESDSEDENEV-YSKIPRQELVD-----SLKELLSLFEHRTNELTD 436
+ + + V + K P E D S EL+S+FE EL
Sbjct: 292 MQAPGRRRWPLLPSRRLHHSSLHFVSWQKAPLSESDDDCDDVSYDELVSMFE----ELHA 347
Query: 437 LKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKG-SGNKH 495
EK + K K L+ EELK T +RL +KL+E D S +H
Sbjct: 348 YSEKEIVKFKALKKDHASLEVLYEELK-------TSHERLTISHEKLKEAHDNLLSTTQH 400
Query: 496 EIALDDFIMAGI-DRSKVVSMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTF 554
+D I + D S + Y S+ + CD + D S+
Sbjct: 401 GALIDVGISCDLLDDSATFHIAYVASS----------------SISTSCDDLVDMSSSS- 443
Query: 555 VPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQNLI 614
++ ++ + ++ K N +++ K KI +R + L
Sbjct: 444 ---SSSCVSICDASLVVENNELKEQVAKLNKRLERCFKGKNTLDKILSEQRCILNKEGL- 499
Query: 615 KPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDS 674
IPK+ + + AT K+ + + + D + + + W LDS
Sbjct: 500 ---GFIPKKGKKPSHRATRFVKSNGRLMMVALFLD---MWVPLYSVVNYHTGGSHWVLDS 553
Query: 675 GCSRHMTGEKALFLTLTM--KDGGEVKFGGNQTGKIIGTGTIGNSS-ISINNVWLVDGLK 731
GC++HMTG++A+F T + + +V FG N GK+IG G I S+ +SI+NV LV L
Sbjct: 554 GCTQHMTGDRAMFTTFEVGRNEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNVSLVKSLN 613
Query: 732 HNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLL 791
NLLS++Q CD F + + DKS FKG R N+Y ++F+ CL+
Sbjct: 614 FNLLSVAQICDLSLSCAFFPQEVIVSSLLDKSCVFKGFRYGNLYLVDFNSSEANLKTCLV 673
Query: 792 SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSK 851
+ W+WH+RL H +SK SK LV GL ++ + D LC ACQ GK V S +K
Sbjct: 674 AKTSLGWLWHRRLAHVGMNQLSKFSKRDLVMGLKDVKFEKDKLCSACQAGKQVACSHPTK 733
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSF 911
I+STS+PLELLH+DLF P S+ G+ + LVIVDDYSR+TWV F+ K ++F F
Sbjct: 734 SIMSTSKPLELLHMDLFDPTTYKSIGGNSHCLVIVDDYSRYTWVFFLHDKSIVADLFKKF 793
Query: 912 CTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTL 971
+ Q+E ++K+RS+ G EF+N E +C+ GI HE + +PQQNGVVERKNRTL
Sbjct: 794 AKRAQNEFSCTLVKIRSNIGSEFKNTNIEDYCDDLGIKHELFATYSPQQNGVVERKNRTL 853
Query: 972 QEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFG 1031
EMARTM+ E ++ FWAEA+NT+C+ NR+Y+ +L+KT+YE+ GR+PNI+YF FG
Sbjct: 854 IEMARTMLDEYGVSDSFWAEAINTACHATNRLYLHRVLKKTSYEVIVGRKPNIAYFRVFG 913
Query: 1032 CTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGSK 1091
C CYI L KF+++ G LGY+ +SKAY+VYN VEE+ V+FD+ GS+
Sbjct: 914 CKCYIHRKGVRLTKFESRCDEGFLLGYASKSKAYRVYNKNKGIVEETADVQFDETN-GSQ 972
Query: 1092 TSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNEI 1151
++ + G ++ D K EVE P + + E ++ A PS + Q E+
Sbjct: 973 EGHENLDDVGDEGLMRVMKNMSIGDVKPI-EVEDKPST--STQDEPSTSAMPS-QAQVEV 1028
Query: 1152 ASEDFLDNTQQVIQPKFKHKS---SHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEP 1208
E Q+ P H + HP + ++G +TRS +S +E
Sbjct: 1029 EEE----KAQEPPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVTSICEHYSFVSCLER 1084
Query: 1209 KTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRN 1268
K V+EAL D W+ AM EEL F RN VW LV +P N+IGTKWVFRNK +E G V RN
Sbjct: 1085 KHVDEALCDPDWMNAMHEELKNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGLVVRN 1144
Query: 1269 KARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEE 1328
KARLVAQG++Q EG+D+ ETFAPVARLEAI +LL++A I L+QMDV+SAFLN
Sbjct: 1145 KARLVAQGFTQVEGLDFGETFAPVARLEAICILLAFASCFDIKLFQMDVKSAFLN----- 1199
Query: 1329 EVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFR 1388
D K+P+HVYKL K+LYGL+QAPRAWY+RL +FL+ DF+ G+VD TLF
Sbjct: 1200 -----------DTKYPNHVYKLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDITLFT 1248
Query: 1389 RTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEG 1448
+ + D + QIYVDDIIFGSTN CKEF +M EFEMSM+GEL FFLG+QI Q K G
Sbjct: 1249 KIIGDDFFVYQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNG 1308
Query: 1449 VYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTA 1508
+V QTKY K+LLK+F LED K + TPM L ++ G VD KLYR MIGSLLYLT
Sbjct: 1309 TFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTV 1368
Query: 1509 SRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADY 1568
SRPDI+FSVC+CARFQ+ P+E HL AVKRI RYLK ++ +GL Y K +KL+G+ D DY
Sbjct: 1369 SRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDPDY 1428
Query: 1569 AGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLED 1628
AG +++RKSTS +CQ LG +L+SW+SK+Q ++A+STAE EY+SA SCC QLLWMK L D
Sbjct: 1429 AGCKVDRKSTSSSCQMLGRSLVSWSSKKQNSVALSTAETEYVSAGSCCAQLLWMKQTLLD 1488
Query: 1629 YQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQW 1688
Y I+ P+ CDN AI ++ NP+ HSR KHI+I+HHF+RD+V K + I I TE Q
Sbjct: 1489 YGISFTKTPLLCDNDGAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQL 1548
Query: 1689 ADIFTKPLSVERFDFIKKNLNM 1710
ADIFTKPL RF ++ LN+
Sbjct: 1549 ADIFTKPLDETRFCKLRNELNI 1570
>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
Length = 1063
Score = 1023 bits (2646), Expect = 0.0
Identities = 535/1063 (50%), Positives = 699/1063 (65%), Gaps = 40/1063 (3%)
Query: 680 MTGEKALFLTLTMKDGGE--VKFGGNQTGKIIGTGTIGNS-SISINNVWLVDGLKHNLLS 736
MTGEK +F + + + FG G + G G I S SI+NV+LVD L +NLLS
Sbjct: 1 MTGEKRMFSSYEKNQDPQRAITFGDGNQGLVKGLGKIAISPDHSISNVFLVDSLDYNLLS 60
Query: 737 ISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDK 796
+SQ C GY+ F+ T+ + D SI FKG +Y ++F D A+ CL++ +
Sbjct: 61 VSQLCQMGYNCLFTDIGVTVFRRSDDSIAFKGVLEGQLYLVDF-DRAELDT-CLIAKTNM 118
Query: 797 KWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVST 856
W+WH+RL H + + K+ K + + GL N+ + D +C ACQ GK V + K+I++T
Sbjct: 119 GWLWHRRLAHVGMKNLHKLLKGEHILGLTNVHFEKDRICSACQAGKQVGTHHPHKNIMTT 178
Query: 857 SRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQ 916
RPLELLH+DLFGP+ S+ GSKY LVIVDDYSR+TWV F++ K E F + Q
Sbjct: 179 DRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQ 238
Query: 917 SEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMAR 976
+E L+I K+RSD+G EF+N E F E+ GI HEFSSP TPQQNGVVERKNRTL +MAR
Sbjct: 239 NEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSSPYTPQQNGVVERKNRTLLDMAR 298
Query: 977 TMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYI 1036
TM+ E FWAEAVNT+CY NR+Y+ +L+KT+YEL G++PNISYF FG C+I
Sbjct: 299 TMLDEYKTPDRFWAEAVNTACYAINRLYLHRILKKTSYELLTGKKPNISYFRVFGSKCFI 358
Query: 1037 LNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGSKTSEQS 1096
L + KF K G LGY ++AY+V+N T VE S V FD+ GS+ +
Sbjct: 359 LIKRGRKSKFAPKTVEGFLLGYDSNTRAYRVFNKSTGLVEVSCDVVFDETN-GSQVEQVD 417
Query: 1097 ESNAGTTDS-------------------EDASESDQPSDSKKYTEVESSPEAEITPEAES 1137
G + E S DQPS S + + + E E + E
Sbjct: 418 LDEIGEEQAPCIALRNMSIGDVCPKESEEPPSTQDQPSSSMQASPPTQN-EDEAQNDEEQ 476
Query: 1138 NSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKH-------KSSHPEELIIGSKDSPRRTR 1190
N E EP N+ + + +P+ H + HP + I+G TR
Sbjct: 477 NQEDEPPQDDSNDQGGDTNDQEKEDEEEPRPPHPRVHQAIQRDHPVDTILGDIHKGVTTR 536
Query: 1191 S---HFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKN 1247
S HF + S + S IEP VEEAL D W++AMQEELN F RN+VW LVP+P+Q N
Sbjct: 537 SRVAHFCEHYSFV---SSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRPNQ-N 592
Query: 1248 IIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAIN 1307
++GTKWVFRNK +E G VTRNKARLVA+GYSQ EG+D+ ET+APVARLE+IR+LL+YA
Sbjct: 593 VVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATY 652
Query: 1308 HGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDR 1367
HG LYQMDV+SAFLNG I+EEVYV+QPPGFED ++P+HVY+L K+LYGLKQAPRAWY+
Sbjct: 653 HGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYEC 712
Query: 1368 LSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFE 1427
L +FLI N F+ G+ D TLF +TL+ D+ + QIYVDDIIFGSTN S C+EFS++M +FE
Sbjct: 713 LRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNKSTCEEFSRIMTQKFE 772
Query: 1428 MSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDT 1487
MSMMGELK+FLG Q+ Q +EG ++ QTKYT+++L KF ++D K + TPM L +
Sbjct: 773 MSMMGELKYFLGFQVKQLQEGTFICQTKYTQDILTKFGMKDAKPIKTPMGTNGHLDLDTG 832
Query: 1488 GTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTN 1547
G VDQK+YR MIGSLLYL ASRPDI+ SVC+CARFQSDP+ESHLTAVKRI RYL T
Sbjct: 833 GKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPK 892
Query: 1548 LGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEA 1607
GL Y + + LIG+ DAD+AG +I RKSTS CQFLG +L+SWASK+Q ++A+STAEA
Sbjct: 893 FGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEA 952
Query: 1608 EYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHF 1667
EYI+A CC QLLWM+ L DY +P+ CDN +AI ++ NP+ HSR KHI I++HF
Sbjct: 953 EYIAAGHCCAQLLWMRQTLLDYGYKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHF 1012
Query: 1668 IRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+RD+ QKG ++I +I+T+ Q ADIFTKPL + F ++ LN+
Sbjct: 1013 LRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRHELNI 1055
>gb|AAC49502.1| Pol [Zea mays] gi|7489803|pir||T04112 pol protein homolog - maize
retrotransposon Opie-2
Length = 1068
Score = 1018 bits (2633), Expect = 0.0
Identities = 523/1061 (49%), Positives = 695/1061 (65%), Gaps = 28/1061 (2%)
Query: 669 SWYLDSGCSRHMTGEKALFLTLTMKDGGE--VKFGGNQTGKIIGTGTIGNSSI-SINNVW 725
SW +DSGC+ HMTGEK +F + + + FG GK+ G G I S+ SI+NV+
Sbjct: 10 SWIIDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISNEHSISNVF 69
Query: 726 LVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQ 785
LV+ L +NLLS+SQ C+ GY+ F+ + ++ + D S+ FKG +Y ++F+
Sbjct: 70 LVESLGYNLLSVSQLCNMGYNCLFTNIDVSVFRRCDGSLAFKGVLDGKLYLVDFAKEEAG 129
Query: 786 KVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVK 845
CL++ W+WH+RL H + + K+ K + V GL N+ + D C ACQ GK V
Sbjct: 130 LDACLIAKTSMGWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFEKDRPCAACQAGKQVG 189
Query: 846 SSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYAC 905
S +K++++TSRPLE+LH+DLFGPV S+ GSKYGLVIVDD+SR+TWV F++ K
Sbjct: 190 GSHHTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQEKSETQ 249
Query: 906 EVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVE 965
F + Q+E ELK+ K+RSD+G EF+N E F E+ GI HEFS+P TPQQNGVVE
Sbjct: 250 GTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVE 309
Query: 966 RKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNIS 1025
RKNRTL +MARTM+ E + FW EAVNT+C+ NR+Y+ +L+ T+YEL G +PN+S
Sbjct: 310 RKNRTLIDMARTMLGEFKTPECFWTEAVNTACHAINRVYLHRILKNTSYELLTGNKPNVS 369
Query: 1026 YFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDD 1085
YF FG CYIL K KF KA G LGY +KAY+V+N + VE S V FD
Sbjct: 370 YFRVFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSGDVVFD- 428
Query: 1086 REPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEV------------ESSPEAEITP 1133
E EQ D +D E D P+ + + + + SP + P
Sbjct: 429 -ETNGSPREQ------VVDCDDVDEEDIPTAAIRTMAIGEVRPQEQDEREQPSPSTMVHP 481
Query: 1134 EAESNSEAEPSSKVQNEIASEDF-LDNTQQVIQP---KFKHKSSHPEELIIGSKDSPRRT 1189
+ + + A +D L+ Q P + + HP + I+G T
Sbjct: 482 PTQDDEQVHQQEVCDQGGAQDDHVLEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTT 541
Query: 1190 RSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNII 1249
RS +S IEP VEEAL D W+LAMQEELN F+RN+VW LVP+P Q N++
Sbjct: 542 RSRLVNFCEHNSFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ-NVV 600
Query: 1250 GTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHG 1309
GTKWVFRNK +E+G VTRNKARLVA+GY+Q G+D+ ETFAPVARLE+IR+LL+YA +H
Sbjct: 601 GTKWVFRNKQDERGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHS 660
Query: 1310 IILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLS 1369
LYQMDV+SAFLNG I+EEVYV+QPPGFED ++PDHV KL K+LYGLKQAPRAWY+ L
Sbjct: 661 FRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECLR 720
Query: 1370 NFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMS 1429
+FLI N F+ G+ D TLF +T D+ + QIYVDDIIFGSTN C+EFS++M +FEMS
Sbjct: 721 DFLIANAFKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMS 780
Query: 1430 MMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGT 1489
MMGEL +FLG Q+ Q K+G ++ QTKYT++LLK+F ++D K TPM G
Sbjct: 781 MMGELNYFLGFQVKQLKDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGK 840
Query: 1490 VVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLG 1549
VDQK YR MIGSLLYL ASRPDI+ SVC+CARFQSDP+E HL AVKRI RYL T G
Sbjct: 841 SVDQKAYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCFG 900
Query: 1550 LLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEY 1609
L Y K + L+G+ D+DYAG +++RKSTS CQFLG +L+SW SK+Q ++A+STAEAEY
Sbjct: 901 LWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAEY 960
Query: 1610 ISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIR 1669
++A CC QLLWM+ L D+ N + +P+ CDN +AI +++NP+ HSR KHI+I+HHF+R
Sbjct: 961 VAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNESAIRMAENPVEHSRTKHIDIRHHFLR 1020
Query: 1670 DYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
D+ QKG +++ + TE+Q ADIFTKPL + F ++ LN+
Sbjct: 1021 DHQQKGDIEVFHVSTENQLADIFTKPLDEKTFCRLRSELNV 1061
>ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28269414|gb|AAO37957.1| putative gag-pol polyprotein
[Oryza sativa (japonica cultivar-group)]
Length = 1969
Score = 1006 bits (2602), Expect = 0.0
Identities = 529/1115 (47%), Positives = 718/1115 (63%), Gaps = 33/1115 (2%)
Query: 618 SKIPKQKDQKNKAATASEKTI-------PKGVKPKVLNDQ-KPLSIHPKVCLRARE---- 665
S PK + K T+ K + PK V+ K Q KP+ C +
Sbjct: 685 SSTPKTSEPKMVPMTSKSKPVELPRPKNPKQVEHKQNQRQTKPVEKTKYECTYCGKAGHL 744
Query: 666 -----KQRSWYLDSGCSRHMTGEKALFLTLTMKDGGE-VKFGGNQTGKIIGTGTIG-NSS 718
+ SW +DSGCSRHMTGE F +LT G E + FG +G+++ GTI N
Sbjct: 745 DFGVGRSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDK 804
Query: 719 ISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKIN 778
+ +V LV LK+NLLS+SQ CD +V F K +++ + + F RV V+ N
Sbjct: 805 FMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFAN 863
Query: 779 FSDLADQKVVCLL-SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGA 837
F A CL+ S N + WH+RLGH + +S+IS + L++GLP + D +C
Sbjct: 864 FDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVQKDLVCAP 923
Query: 838 CQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKF 897
C+ GK+ SS K +V T P +LLH+D GP S+ G Y LV+VDD+SR++WV F
Sbjct: 924 CRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYF 983
Query: 898 IKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRT 957
++SK+ F S + E + +RSD+G EF+N FE FC+ G+ H+FSSP
Sbjct: 984 LESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYV 1043
Query: 958 PQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELF 1017
PQQNGVVERKNRTL EMARTM+ E + FW EA++ +C+I NR+++R +L KT YEL
Sbjct: 1044 PQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELR 1103
Query: 1018 KGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEE 1077
GRRP +S+ FGC C++L + + L KF++++ GIFLGY+ S+AY+VY T + E
Sbjct: 1104 FGRRPKVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVE 1162
Query: 1078 SMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEIT--PEA 1135
+ V FD+ PG++ + ED+ + D D ++S+P + T P
Sbjct: 1163 TCEVTFDEASPGARPEISGVPDESIFVDEDSDDDD---DDSIPPPLDSTPPVQETGSPST 1219
Query: 1136 ESNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQ 1195
S S P++ + A+E+ T P+ P+ +I G + R RS+
Sbjct: 1220 TSPSGDAPTT---SSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYELV 1276
Query: 1196 EESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVF 1255
+ + + EPK V ALSD+ W+ AM EEL F+RN VW LV P N+IGTKWVF
Sbjct: 1277 NSAFV---ASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVF 1333
Query: 1256 RNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQM 1315
+NKL E G + RNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+LL++A + G L+QM
Sbjct: 1334 KNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQM 1393
Query: 1316 DVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKN 1375
DV+SAFLNGVIEEEVYVKQPPGFE+ K P+HV+KL+K+LYGLKQAPRAWY+RL FL++N
Sbjct: 1394 DVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQN 1453
Query: 1376 DFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELK 1435
FE G VD TLF D L+VQIYVDDIIFG ++ +L +FS +M EFEMSMMGEL
Sbjct: 1454 GFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELT 1513
Query: 1436 FFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKL 1495
FFLG+QI Q+KEG++VHQTKY+KELLKKF + DCK + TPM T +L ++ G VDQ+
Sbjct: 1514 FFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQRE 1573
Query: 1496 YRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKS 1555
YR MIGSLLYLTASRPDI FSVCLCARFQ+ PR SH AVKRIFRY+K T G+ Y S
Sbjct: 1574 YRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCS 1633
Query: 1556 LDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASC 1615
+ F DAD+AG +I+RKSTS C FLG +L+SW+S++Q+++A STAEAEY++AAS
Sbjct: 1634 SALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASA 1693
Query: 1616 CTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKG 1675
C+Q+LWM L+DY ++ + +P+ CDNT+AI ++KNP+ HSR KHIEI++HF+RD V+KG
Sbjct: 1694 CSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKG 1753
Query: 1676 ILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+ ++F+++E Q ADIFTKPL RF+F++ L +
Sbjct: 1754 TIVLEFVESEKQLADIFTKPLDRSRFEFLRSELGV 1788
Score = 116 bits (291), Expect = 6e-24
Identities = 159/684 (23%), Positives = 266/684 (38%), Gaps = 84/684 (12%)
Query: 31 APKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGV---DDLDLDEEGAAIDRRIHTPA 87
A F D F WK M +++ +W+ ++ DD D+ TPA
Sbjct: 7 AKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDADI------------TPA 54
Query: 88 QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVH 147
+++ R I+ I E+ ++ +A M+ +LC EG+ ++ +
Sbjct: 55 NMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHK 114
Query: 148 QYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIE 206
+Y+ F M ESI+ + RF ++S L+ + K + +D+ +L L W KVT+I
Sbjct: 115 EYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSIT 174
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
E+ L+ L+++ L S LK HEM + + K S ++ G S + A+ +
Sbjct: 175 ESAPLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAA 234
Query: 267 PDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIAD 326
+ E+Q KI + L ARK + K K + CF C +P H +
Sbjct: 235 LHSVT-EEQLEKIP--EDDLALFARKFSRAYKNVRDRKRGKTNEPFVCFECGEPNHKRVN 291
Query: 327 CPDLQKEKFKGKSKKSSFNSSKFRKQIKK----SLMATWEDLD-SESGSDKEEADDDAKA 381
CP L+K+ K +KK K +K + K ++A E++ S+ SD ++ + K
Sbjct: 292 CPKLKKKSDK-TTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSDDDDQEKGDKD 350
Query: 382 AVGLVATVSSE--------AVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNE 433
G+ ++E A+ + + SE IP SL L N+
Sbjct: 351 FSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIP------SLDGSLCDDSCSDND 404
Query: 434 LTD---LKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKG 490
D KE+ LM + K E+LK N RL+S+ + ++ C
Sbjct: 405 SVDDELSKERMAHLMIEISDKYRSSKYKIEKLKSENDGMALEIARLRSMIPE-EDTCSTC 463
Query: 491 SGNKHEI-ALDDFIMA---GIDRSKVVSMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCI 546
+ EI L D + + G S ST +G E + KE
Sbjct: 464 ASYLSEINLLKDKLKSCALGAGNPSSASAACSTCYEMKVDMGLLEMELKE---------- 513
Query: 547 KDGLKSTFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRS 606
LK FV + I ++ P + ++ + LK TK+D ++
Sbjct: 514 ---LKEKFVHD---RIGRCENCPILTSDNDELRQQVAMLK----TKND----LLESFATK 559
Query: 607 EPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREK 666
EP+H + + KD KT+ +K D I KV L + +K
Sbjct: 560 EPIHSSCANCAILETELKD---------AKTVIDSIKS---IDSCSSCISLKVDLESAKK 607
Query: 667 QRSWYLDSGCSRHMTGEKALFLTL 690
+ S YL R G+K L + L
Sbjct: 608 ENS-YLQQSLERFAQGKKKLNMIL 630
>ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1410
Score = 1003 bits (2592), Expect = 0.0
Identities = 538/1150 (46%), Positives = 733/1150 (62%), Gaps = 24/1150 (2%)
Query: 569 PEASGSQAKITSKPENLKIKVMTKSDPKSQKI-KILKRSEPVHQNLIKPESKIPKQ--KD 625
P+ K T KPE K K+D + I K+L E V + I + ++ KD
Sbjct: 270 PKLKKKSDKTTKKPEGQGRK--GKNDLMKKAIHKVLAALEEVQLSDIDSDDDDQEKGDKD 327
Query: 626 QKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKA 685
A+ + + L D+ S HP+ R SW +DSGCSRHMTGE
Sbjct: 328 FSGMCCLANNEDFIN-LCLMALEDKDDSSEHPEDFGVGRSN--SWLVDSGCSRHMTGEAK 384
Query: 686 LFLTLTMKDGGE-VKFGGNQTGKIIGTGTIG-NSSISINNVWLVDGLKHNLLSISQFCDN 743
F +LT G E + FG +G+++ GTI N + +V LV LK+NLLS+SQ CD
Sbjct: 385 WFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKDVALVSKLKYNLLSVSQLCDE 444
Query: 744 GYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLL-SMNDKKWVWHK 802
+V F K +++ + + F RV V+ NF A CL+ S N + WH+
Sbjct: 445 NLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSAPGPSRCLVASENRDLFFWHR 503
Query: 803 RLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLEL 862
RLGH + +S+IS + L++GLP + D +C C+ GK+ SS K +V T P +L
Sbjct: 504 RLGHIGFDHLSRISGMDLIRGLPKLKAPKDLVCAPCRHGKMTSSSHKPVTMVMTDGPGQL 563
Query: 863 LHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKELK 922
LH++ GP S+ G Y LV+VDD+SR++WV F++SK+ F S + E
Sbjct: 564 LHMNTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKEETFGFFQSLARSLALEFPGA 623
Query: 923 ILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHEN 982
+ +RSD+G EF+N FE FC+ G+ H+FSSP PQQNGVVERKNRTL EMARTM+ E
Sbjct: 624 LRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNGVVERKNRTLVEMARTMLDEF 683
Query: 983 NLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDY 1042
+ FW EA++ +C+I NR+++R +L KT YEL GRRP +S+ FGC C++L + +
Sbjct: 684 TTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRPKVSHLRVFGCKCFVLKSGN- 742
Query: 1043 LKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGT 1102
L KF++++ GIFLGY+ S+AY+VY T + E+ V FD+ PG++ +
Sbjct: 743 LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFDEASPGARPEISGVLDESI 802
Query: 1103 TDSEDASESDQPSDSKKYTEVESSPEAEIT--PEAESNSEAEPSSKVQNEIASEDFLDNT 1160
ED+ + D D ++S+P + T P S S P++ + A+E+ T
Sbjct: 803 FVDEDSDDDD---DDSIPPPLDSTPPVQETGSPSTTSPSGDAPTT---SSSAAEEIDGGT 856
Query: 1161 QQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGW 1220
P+ P+ +I G + R RS+ + + + EPK V ALSD+ W
Sbjct: 857 SGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYDLVNSAFV---ASFEPKNVCHALSDENW 913
Query: 1221 ILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQ 1280
+ AM EEL F+RN VW LV P N+IGTKWVF+NKL E G + RNKARLVAQG++Q
Sbjct: 914 VNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGFTQV 973
Query: 1281 EGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFED 1340
EG+D+ ETFAPVARLEAIR+LL++A + G L+QMDV+SAFLNGVIEEEVYVKQPPGFE+
Sbjct: 974 EGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFEN 1033
Query: 1341 LKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQI 1400
K P+HV+KL K+LYGLKQAPRAWY+RL FL++N FE G VD TLF D L+VQI
Sbjct: 1034 PKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQI 1093
Query: 1401 YVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKEL 1460
YVDDIIFG ++ +L +FS +M EFEMSMMGEL FFLG+QI Q+KEG++VHQTKY+KEL
Sbjct: 1094 YVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSKEL 1153
Query: 1461 LKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLC 1520
LKKF + DCK + TPM T +L ++ G VDQ+ YR MIGSLLYLTASRPDI FSVCLC
Sbjct: 1154 LKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHFSVCLC 1213
Query: 1521 ARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSE 1580
ARFQ+ PR SH AVKRIFRY+K T G+ Y S + F DAD+AG +I+RKSTS
Sbjct: 1214 ARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDRKSTSG 1273
Query: 1581 NCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYC 1640
C FLG +L+SW+S++Q+++A STAEAEY++AAS C+Q+LWM L+DY ++ + +P+ C
Sbjct: 1274 TCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSGVPLLC 1333
Query: 1641 DNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVER 1700
DNT+AI ++KNP+ HSR KHIEI++HF+RD V+KG + ++F+++E Q ADIFTKPL R
Sbjct: 1334 DNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRSR 1393
Query: 1701 FDFIKKNLNM 1710
F+F++ L +
Sbjct: 1394 FEFLRSELGV 1403
Score = 109 bits (272), Expect = 9e-22
Identities = 77/295 (26%), Positives = 130/295 (43%), Gaps = 4/295 (1%)
Query: 85 TPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALM 144
TPA +++ R I+ I E+ ++ +A M+ +LC EG+ ++ +
Sbjct: 29 TPANMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQ 88
Query: 145 LVHQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVT 203
+Y+ F M ESI+ + RF +VS L+ + K + +D+ +L L W KVT
Sbjct: 89 FHKEYQRFEMHPGESIDSYFKRFGEIVSKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVT 148
Query: 204 AIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESE 263
+I E+ L+ L+++ L S LK HEM + + K S ++ G S + A+
Sbjct: 149 SITESAPLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVCGGFS 208
Query: 264 EESPDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHF 323
+ + E+Q KI + L ARK + + K K + CF C +P H
Sbjct: 209 LAALHSVT-EEQLEKIP--EDDLALFARKFSRAYKNVRNKKRGKTNEPFVCFECGEPNHI 265
Query: 324 IADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDD 378
+CP L+K+ K K +KK++ L+ SD + DDD
Sbjct: 266 RVNCPKLKKKSDKTTKKPEGQGRKGKNDLMKKAIHKVLAALEEVQLSDIDSDDDD 320
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902378|ref|NP_912535.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2145
Score = 1002 bits (2591), Expect = 0.0
Identities = 527/1115 (47%), Positives = 717/1115 (64%), Gaps = 33/1115 (2%)
Query: 618 SKIPKQKDQKNKAATASEKTI-------PKGVKPKVLNDQ-KPLSIHPKVCLRARE---- 665
S PK + K T+ K + PK V+ K Q KP+ C +
Sbjct: 685 SSTPKTSEPKMVPMTSKSKPVELPRPKNPKQVEHKQNQRQTKPVEKTKYECTYCGKAGHL 744
Query: 666 -----KQRSWYLDSGCSRHMTGEKALFLTLTMKDGGE-VKFGGNQTGKIIGTGTIG-NSS 718
+ SW +DSGCSRHMTGE F +LT E + FG +G+++ GTI N
Sbjct: 745 DFGVGRSNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDK 804
Query: 719 ISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKIN 778
+ +V LV LK+NLLS+SQ CD +V F K +++ + + F RV V+ N
Sbjct: 805 FMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFAN 863
Query: 779 FSDLADQKVVCLL-SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGA 837
F A CL+ S N + WH+RLGH + +S+IS + L++GLP + D +C
Sbjct: 864 FDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAP 923
Query: 838 CQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKF 897
C+ GK+ SS K +V T P +LLH+D GP S+ G Y LV+VDD+SR++WV F
Sbjct: 924 CRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYF 983
Query: 898 IKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRT 957
++SK+ F S + E + +RSD+G EF+N FE FC+ G+ H+FSSP
Sbjct: 984 LESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYV 1043
Query: 958 PQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELF 1017
PQQNGVVERKNRTL EMARTM+ E + FW EA++ +C+I NR+++R +L KT YEL
Sbjct: 1044 PQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELR 1103
Query: 1018 KGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEE 1077
GRRP +S+ FGC C++L + + L KF++++ GIFLGY+ S+AY+VY T + E
Sbjct: 1104 FGRRPKVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVE 1162
Query: 1078 SMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEIT--PEA 1135
+ V FD+ PG++ + ED+ + D D ++S+P + T P
Sbjct: 1163 TCEVTFDEASPGARPEISGVPDESIFVDEDSDDDD---DDSIPPPLDSTPPVQETGSPST 1219
Query: 1136 ESNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQ 1195
S S P++ + A+E+ T P+ P+ +I G + R RS+
Sbjct: 1220 TSPSGDAPTT---SSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYELV 1276
Query: 1196 EESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVF 1255
+ + + EPK V ALSD+ W+ AM EEL F+RN VW LV P N+IGTKWVF
Sbjct: 1277 NSAFV---ASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVF 1333
Query: 1256 RNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQM 1315
+NKL E G + RNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+LL++A + G L+QM
Sbjct: 1334 KNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQM 1393
Query: 1316 DVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKN 1375
DV+SAFLNGVIEEEVYVKQPPGFE+ K P+HV+KL+K+LYGLKQAPRAWY+RL FL++N
Sbjct: 1394 DVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQN 1453
Query: 1376 DFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELK 1435
FE G VD TLF D L+VQIYVDDIIFG ++ +L +FS +M EFEMSMMGEL
Sbjct: 1454 GFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELT 1513
Query: 1436 FFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKL 1495
FFLG+QI Q+KEG++VHQTKY+KELLKKF + DCK + TPM T +L ++ G VDQ+
Sbjct: 1514 FFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQRE 1573
Query: 1496 YRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKS 1555
YR MIGSLLYLTASRPDI FSVCLCARFQ+ PR SH AVKR+FRY+K T G+ Y S
Sbjct: 1574 YRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCS 1633
Query: 1556 LDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASC 1615
+ F DAD+AG +I+RKSTS C FLG +L+SW+S++Q+++A STAEAEY++AAS
Sbjct: 1634 SALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASA 1693
Query: 1616 CTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKG 1675
C+Q+LWM L+DY ++ + +P+ CDNT+AI ++KNP+ HSR KHIEI++HF+RD V+KG
Sbjct: 1694 CSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKG 1753
Query: 1676 ILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+ ++F+++E Q ADIFTKPL RF+F++ L +
Sbjct: 1754 TIVLEFVESEKQLADIFTKPLDRSRFEFLRSELGV 1788
Score = 116 bits (290), Expect = 8e-24
Identities = 116/498 (23%), Positives = 209/498 (41%), Gaps = 53/498 (10%)
Query: 31 APKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGV---DDLDLDEEGAAIDRRIHTPA 87
A F D F WK M +++ +W+ ++ DD D+ TPA
Sbjct: 7 AKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDADI------------TPA 54
Query: 88 QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVH 147
+++ R I+ I E+ ++ +A M+ +LC EG+ ++ +
Sbjct: 55 NMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHK 114
Query: 148 QYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIE 206
+Y+ F M ESI+ + RF ++S L+ + K + +D+ +L L W KVT+I
Sbjct: 115 EYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSIT 174
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
E+ L+ L+++ L S LK HEM + + K S ++ G S + A+ +
Sbjct: 175 ESAPLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAA 234
Query: 267 PDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIAD 326
+ E+Q KI + L ARK + K K + CF C +P H +
Sbjct: 235 LHSVT-EEQLEKIP--EDDLALFARKFSRAYKNVRDRKRGKTNEPFVCFECGEPNHKRVN 291
Query: 327 CPDLQKEKFKGKSKKSSFNSSKFRKQIKK----SLMATWEDLD-SESGSDKEEADDDAKA 381
CP L+K+ K +KK K +K + K ++A E++ S+ SD ++ + K
Sbjct: 292 CPKLKKKSDK-TTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSDDDDQEKGDKD 350
Query: 382 AVGLVATVSSE--------AVSEAESDSEDENEVYSKIPRQELV---------DSLKELL 424
G+ ++E A+ + + SE IP + DS+ + L
Sbjct: 351 FSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIPSLDGSLCDDSCSDNDSVDDEL 410
Query: 425 SLFEHRTNELTDLKEKY------VDLMKQQKSTL-LELKASEEELKGFNLIST--TYEDR 475
S E + + ++ +KY ++ +K + + LE+ + + ST +Y
Sbjct: 411 SK-ERMAHLMIEISDKYRSSKYKIEKLKSENDGMALEIARLRSMIPEEDTCSTCASYLSE 469
Query: 476 LKSLCQKLQEKCDKGSGN 493
+ L KL + C G+GN
Sbjct: 470 INLLKDKL-KSCALGAGN 486
>ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultivar-group)]
gi|32488723|emb|CAE03600.1| OSJNBb0004A17.2 [Oryza sativa
(japonica cultivar-group)]
Length = 1877
Score = 1002 bits (2590), Expect = 0.0
Identities = 513/1050 (48%), Positives = 697/1050 (65%), Gaps = 16/1050 (1%)
Query: 666 KQRSWYLDSGCSRHMTGEKALFLTLTMKDGGE-VKFGGNQTGKIIGTGTIG-NSSISINN 723
+ SW +DSGCSRHMTGE F +LT E + FG +G+++ GTI N + +
Sbjct: 832 RSNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKD 891
Query: 724 VWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLA 783
V LV LK+NLLS+SQ CD +V F K +++ + + F RV V+ NF A
Sbjct: 892 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 950
Query: 784 DQKVVCLL-SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGK 842
CL+ S N + WH+RLGH + +S+IS + L++GLP + D +C C+ GK
Sbjct: 951 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 1010
Query: 843 IVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 902
+ SS K +V T P +LLH+D GP S+ G Y LV+VDD+SR++WV F++SK+
Sbjct: 1011 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKE 1070
Query: 903 YACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNG 962
F S + E + +RSD+G EF+N FE FC+ G+ H+FSSP PQQNG
Sbjct: 1071 ETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNG 1130
Query: 963 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRP 1022
VVERKNRTL EMARTM+ E + FW EA++ +C+I NR+++R +L KT YEL GRRP
Sbjct: 1131 VVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRP 1190
Query: 1023 NISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVK 1082
+S+ FGC C++L + + L KF++++ GIFLGY+ S+AY+VY T + E+ V
Sbjct: 1191 KVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVT 1249
Query: 1083 FDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEIT--PEAESNSE 1140
FD+ PG++ + ED+ + D D ++S+P + T P S S
Sbjct: 1250 FDEASPGARPEISGVPDESIFVDEDSDDDD---DDSIPPPLDSTPPVQETGSPSTTSPSG 1306
Query: 1141 AEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLI 1200
P++ + A+E+ T P+ P+ +I G + R RS+ + +
Sbjct: 1307 DAPTT---SSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYELVNSAFV 1363
Query: 1201 GLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLN 1260
+ EPK V ALSD+ W+ AM EEL F+RN VW LV P N+IGTKWVF+NKL
Sbjct: 1364 ---ASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLG 1420
Query: 1261 EQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESA 1320
E G + RNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+LL++A + G L+QMDV+SA
Sbjct: 1421 EDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSA 1480
Query: 1321 FLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERG 1380
FLNGVIEEEVYVKQPPGFE+ K P+HV+KL+K+LYGLKQAPRAWY+RL FL++N FE G
Sbjct: 1481 FLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMG 1540
Query: 1381 QVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGI 1440
VD TLF D L+VQIYVDDIIFG ++ +L +FS +M EFEMSMMGEL FFLG+
Sbjct: 1541 AVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGL 1600
Query: 1441 QINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMI 1500
QI Q+KEG++VHQTKY+KELLKKF + DCK + TPM T +L ++ G VDQ+ YR MI
Sbjct: 1601 QIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMI 1660
Query: 1501 GSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKL 1560
GSLLYLTASRPDI FSVCLCARFQ+ PR SH AVKR+FRY+K T G+ Y S +
Sbjct: 1661 GSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSV 1720
Query: 1561 IGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLL 1620
F DAD+AG +I+RKSTS C FLG +L+SW+S++Q+++A STAEAEY++AAS C+Q+L
Sbjct: 1721 RAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVL 1780
Query: 1621 WMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQ 1680
WM L+DY ++ + +P+ CDNT+AI ++KNP+ HSR KHIEI++HF+RD V+KG + ++
Sbjct: 1781 WMISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLE 1840
Query: 1681 FIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
F+++E Q ADIFTKPL RF+F++ L +
Sbjct: 1841 FVESEKQLADIFTKPLDRSRFEFLRSELGV 1870
Score = 116 bits (290), Expect = 8e-24
Identities = 116/498 (23%), Positives = 209/498 (41%), Gaps = 53/498 (10%)
Query: 31 APKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGV---DDLDLDEEGAAIDRRIHTPA 87
A F D F WK M +++ +W+ ++ DD D+ TPA
Sbjct: 7 AKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDADI------------TPA 54
Query: 88 QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVH 147
+++ R I+ I E+ ++ +A M+ +LC EG+ ++ +
Sbjct: 55 NMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHK 114
Query: 148 QYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIE 206
+Y+ F M ESI+ + RF ++S L+ + K + +D+ +L L W KVT+I
Sbjct: 115 EYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSIT 174
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
E+ L+ L+++ L S LK HEM + + K S ++ G S + A+ +
Sbjct: 175 ESAPLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAA 234
Query: 267 PDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIAD 326
+ E+Q KI + L ARK + K K + CF C +P H +
Sbjct: 235 LHSVT-EEQLEKIP--EDDLALFARKFSRAYKNVRDRKRGKTNEPFVCFECGEPNHKRVN 291
Query: 327 CPDLQKEKFKGKSKKSSFNSSKFRKQIKK----SLMATWEDLD-SESGSDKEEADDDAKA 381
CP L+K+ K +KK K +K + K ++A E++ S+ SD ++ + K
Sbjct: 292 CPKLKKKSDK-TTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSDDDDQEKGDKD 350
Query: 382 AVGLVATVSSE--------AVSEAESDSEDENEVYSKIPRQELV---------DSLKELL 424
G+ ++E A+ + + SE IP + DS+ + L
Sbjct: 351 FSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIPSLDGSLCDDSCSDNDSVDDEL 410
Query: 425 SLFEHRTNELTDLKEKY------VDLMKQQKSTL-LELKASEEELKGFNLIST--TYEDR 475
S E + + ++ +KY ++ +K + + LE+ + + ST +Y
Sbjct: 411 SK-ERMAHLMIEISDKYRSSKYKIEKLKSENDGMALEIARLRSMIPEEDTCSTCASYLSE 469
Query: 476 LKSLCQKLQEKCDKGSGN 493
+ L KL + C G+GN
Sbjct: 470 INLLKDKL-KSCALGAGN 486
>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
Length = 1892
Score = 988 bits (2554), Expect = 0.0
Identities = 520/1073 (48%), Positives = 679/1073 (62%), Gaps = 82/1073 (7%)
Query: 669 SWYLDSGCSRHMTGEKALFLTLTMKDGGE--VKFGGNQTGKIIGTGTIGNSSISINNVWL 726
SW LDSGC+ HMTGEK +F + + + FG G + G
Sbjct: 863 SWILDSGCTNHMTGEKKMFSSYEKNKDPQRAITFGDGNQGLVKGV--------------- 907
Query: 727 VDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQK 786
T+ + D SI FKG +Y + F D A+
Sbjct: 908 ----------------------------TVFRRSDDSIAFKGVLEGQLYLVVF-DRAELD 938
Query: 787 VVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKS 846
CL++ + W+WH+RL H + + K+ K + + GL N+ + D +C ACQ GK V +
Sbjct: 939 T-CLIAKTNMGWLWHRRLAHVGMKNLHKLLKGEHILGLTNVHFEKDRICSACQAGKQVGT 997
Query: 847 SFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACE 906
K+I++T RPLELLH+DLFGP+ S+ GSKY LVIVDDYSR+TWV F++ K E
Sbjct: 998 HHPHKNIMTTDRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQE 1057
Query: 907 VFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVER 966
F + Q+E L+I K+RSD+G EF+N E F E+ GI HEFSSP TPQQNGVVER
Sbjct: 1058 TLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSSPYTPQQNGVVER 1117
Query: 967 KNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISY 1026
KNRTL +MARTM+ E FWAEAVNT+CY NR+Y+ +L+KT+YEL G++PNISY
Sbjct: 1118 KNRTLLDMARTMLDEYKTPDRFWAEAVNTACYAINRLYLHRILKKTSYELLTGKKPNISY 1177
Query: 1027 FHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDR 1086
F FG C+IL + KF K G LGY ++AY+V+N T VE S V FD+
Sbjct: 1178 FRVFGSKCFILIKRGRKSKFAPKTVEGFLLGYDSNTRAYRVFNKSTGLVEVSCDVVFDET 1237
Query: 1087 EPGSKTSEQSESNAGTTDS-------------------EDASESDQPSDSKKYTEVESSP 1127
GS+ + G + E S DQP S + + +
Sbjct: 1238 N-GSQVEQVDLDEIGEEQAPCIALRNMSIGDVCPKESEEPPSTQDQPPSSMQASPPTQN- 1295
Query: 1128 EAEITPEAESNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKH-------KSSHPEELII 1180
E E + E N E +P N+ + + +P+ H + HP + I+
Sbjct: 1296 EDEAQNDEEQNQEVKPPQDKSNDQGGDTNDQEKEDEEEPRPPHPRVHQAIQRDHPVDTIL 1355
Query: 1181 GSKDSPRRTRS---HFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVW 1237
G TRS HF + S + S IEP VEEAL D W++AMQEELN F RN+VW
Sbjct: 1356 GDIHKGVTTRSRVAHFCEHYSFV---SSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVW 1412
Query: 1238 DLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEA 1297
LVP+P+Q N++GTKWVFRNK +E G VTRNKARLVA+GYSQ EG+D+ ET+APVARLE+
Sbjct: 1413 HLVPRPNQ-NVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFDETYAPVARLES 1471
Query: 1298 IRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGL 1357
IR+LL+YA HG LYQMDV+SAFLNG I+EEVYV+QPPGFED ++P+HVY+L K+LYGL
Sbjct: 1472 IRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGL 1531
Query: 1358 KQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKE 1417
KQAPRAWY+ L +FLI N F+ G+ D TLF +TL+ D+ + QIYVDDIIFGSTN S C+E
Sbjct: 1532 KQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNESTCEE 1591
Query: 1418 FSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMH 1477
FS++M +FEMSMMGELK+FLG Q+ Q +EG ++ QTKYT+++L KF ++D K + TPM
Sbjct: 1592 FSRIMTQKFEMSMMGELKYFLGFQVKQLREGTFISQTKYTQDILAKFGMKDAKPIKTPMG 1651
Query: 1478 PTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKR 1537
L + G VDQK+YR MIGSLLYL ASRPDI+ SVC+CARFQSDP+ESHLTAVKR
Sbjct: 1652 TNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESHLTAVKR 1711
Query: 1538 IFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQ 1597
I RYL T GL Y + + LIG+ DAD+AG +I RKSTS CQFLG +L+SWASK+Q
Sbjct: 1712 ILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQ 1771
Query: 1598 ATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSR 1657
++A+STAEAEYI+A CC QLLWM+ L DY +P+ CDN +AI ++ NP+ HSR
Sbjct: 1772 NSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAIKMADNPVEHSR 1831
Query: 1658 AKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
KHI I++HF+RD+ QKG ++I +I+T+ Q ADIFTKPL + F ++ LN+
Sbjct: 1832 TKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQSFTRLRHELNI 1884
Score = 116 bits (290), Expect = 8e-24
Identities = 124/484 (25%), Positives = 209/484 (42%), Gaps = 59/484 (12%)
Query: 4 DEESVTTK------YTSVKHDYDTADKKTDS-----GKAPKFNGDPEEFSWWKTNMYSFI 52
D SVT+K Y+ + Y K T GK P FNG E+++ W M +
Sbjct: 95 DAASVTSKRQERKKYSKIPLRYPRVPKHTPLLSVPLGKPPTFNG--EDYAMWSNLMRFHL 152
Query: 53 MGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYM 112
L + +WD++E GV + +E D ++ + + I++AS+ + EY
Sbjct: 153 TSLHKRIWDVVEYGVQVPSIGDEDYDTDE------VAQIEHFNSQAATILLASLSKEEYN 206
Query: 113 KMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVS 172
K+ AK ++ L EG + K K + + F ++ E ++MY+R +TLV+
Sbjct: 207 KVQGLKNAKEIWDLLKTAHEGDELTKITKRETIEGELGRFHLRQGEEPQDMYNRLKTLVN 266
Query: 173 GLQILKKSYVASDHVSK-ILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLN 231
++ L + V K ILR+L +V I ++ E+++ + E +
Sbjct: 267 QVRNLGSTKWDDHEVVKVILRALIFLNPTQVQLIRGNPRYPLMTPEEVIGNFVSFECMI- 325
Query: 232 EHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKIAMLSNKLEYLAR 291
+ SKK + PS + A+KA+E ++E + Q + + L N+ L
Sbjct: 326 --KGSKKINELDEPSTSEAQPV--AFKATEEKKEE---STPSRQPIDASKLDNEEMALII 378
Query: 292 KQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRK 351
K + + K+ K+ K +K C+ C KPGHFIA CP + + +G KK K
Sbjct: 379 KSFRQILKQRKGKDYKPRSKKVCYKCGKPGHFIAKCP-MSSDSDRGDDKKGRRKEKKRYY 437
Query: 352 QIKKSLMATWEDLDS-ESGSDKEEADDDAKAAV--GLV-----------------ATVSS 391
+ K + DS ES SD + +D A AV GL+ S
Sbjct: 438 KKKGGDAHVCREWDSDESSSDSSDDEDAANIAVTKGLLFPNVGHKCLMAKDGKKKVKSKS 497
Query: 392 EAVSEAESDSEDENE------VYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLM 445
E SD +D+NE +++ + E + L EL+S H ++L D +E + L+
Sbjct: 498 STKYETSSDEDDKNEEDNLRILFANL-NMEQKEKLNELISAI-HEKDDLLDSQEDF--LI 553
Query: 446 KQQK 449
K+ K
Sbjct: 554 KENK 557
>gb|AAL35396.1| Opie2a pol [Zea mays]
Length = 1048
Score = 981 bits (2536), Expect = 0.0
Identities = 506/1049 (48%), Positives = 675/1049 (64%), Gaps = 26/1049 (2%)
Query: 680 MTGEKALFLTLTMKDGGE--VKFGGNQTGKIIGTGTIGNSSI-SINNVWLVDGLKHNLLS 736
MTGEK +F + + + FG GK+ G G I SS SI+NV+LV+ L +N LS
Sbjct: 1 MTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISSEHSISNVFLVESLGYNFLS 60
Query: 737 ISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDK 796
+SQ C+ GY+ F+ + ++ + D S+ FKG +Y ++F+ CL++
Sbjct: 61 VSQLCNMGYNCLFTNVDVSVFRRSDGSLAFKGVLDGKLYLVDFAKEEAGLDACLIAKTSM 120
Query: 797 KWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVST 856
W+WH+RL H + + K+ K + V GL N+ + D C ACQ GK V+ S +K++++T
Sbjct: 121 GWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFKKDRPCVACQAGKQVRGSHHTKNVMTT 180
Query: 857 SRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQ 916
SRPLE+LH+DLFGPV S+ GSKYGLVIVDD+SR+TWV F++ K + + Q
Sbjct: 181 SRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTLKRYLRRAQ 240
Query: 917 SEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMAR 976
+E ELK+ K+RSD+G EF+N E F + GI HEFS+P TPQQNGVVERKNRTL +MAR
Sbjct: 241 NEFELKVKKIRSDNGSEFKNLQVEEFLVEEGIKHEFSAPYTPQQNGVVERKNRTLMDMAR 300
Query: 977 TMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYI 1036
TM+ E + FW+EAVNT+C+ NR+Y+ +L+ T+YEL G +PN+SYF FG CYI
Sbjct: 301 TMLGEFKTPERFWSEAVNTACHSINRVYLHRLLKNTSYELLTGNKPNVSYFRVFGSKCYI 360
Query: 1037 LNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDR---------- 1086
L K KF KA G LGY +KAY+V+N + VE S V FD+
Sbjct: 361 LVKKGRTSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNGSLREQVVN 420
Query: 1087 -----EPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEA 1141
E T+ G ++ E DQPS + E A A
Sbjct: 421 LDDVDEEDVPTAAMRTMAIGDVRPQEHLEQDQPSSTTMVHPPTQDDEQAPQVGAHDQGGA 480
Query: 1142 EPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIG 1201
+ +V+ E A + + IQ +HP I+G TRS
Sbjct: 481 Q-DVQVEEEEAPQAPPTQVRATIQ------RNHPVNQILGDISKGVTTRSRLVNFCEHYS 533
Query: 1202 LLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNE 1261
+S IEP VEE L D W+LAMQEELN F+RN+VW LVP+P Q N++GTKWVFRNK +E
Sbjct: 534 FVSSIEPFRVEEVLLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ-NVVGTKWVFRNKQDE 592
Query: 1262 QGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAF 1321
G VTRNKARLVA+GY+Q G+D+ ETFAPVARL++IR+ L+YA +H LYQMDV+SAF
Sbjct: 593 HGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLKSIRIWLAYAAHHSFRLYQMDVKSAF 652
Query: 1322 LNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQ 1381
LNG I+EEVYV+QPPGFED + PDHV KL K+LYGLKQAPRAWY+ L +FLI N F+ G+
Sbjct: 653 LNGPIKEEVYVEQPPGFEDERFPDHVCKLSKALYGLKQAPRAWYECLRDFLIANAFKVGK 712
Query: 1382 VDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQ 1441
D TLF +T D+ + QIYVDDIIFGSTN + C+EFS++M +FEMSMMGEL +FLG Q
Sbjct: 713 ADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQNSCEEFSRVMTQKFEMSMMGELSYFLGFQ 772
Query: 1442 INQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIG 1501
+ Q K+G ++ QTKYT++L+K+F ++D K TPM G VDQK YR IG
Sbjct: 773 VRQLKDGTFISQTKYTQDLIKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSTIG 832
Query: 1502 SLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLI 1561
SLLYL ASRPDI+ SVC+CARFQSDPRE HL AVKRI RYL T G+ Y K + LI
Sbjct: 833 SLLYLCASRPDIMLSVCMCARFQSDPRECHLVAVKRILRYLVATPCFGIWYPKGSTFDLI 892
Query: 1562 GFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLW 1621
G+ D+DYA +++RKSTS CQFLG +L+SW SK+Q ++A+STAEAEY++ CC QLLW
Sbjct: 893 GYSDSDYARCKVDRKSTSRMCQFLGRSLVSWNSKKQTSVALSTAEAEYVAVGQCCAQLLW 952
Query: 1622 MKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQF 1681
M+ L D+ N + +P+ CDN +AI +++NP+ HSR KHI+I+HHF+RD+ QKG++++
Sbjct: 953 MRQTLRDFGYNLSEVPLLCDNESAIRIAENPVEHSRTKHIDIRHHFLRDHQQKGVIEVFH 1012
Query: 1682 IDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+ +E+ ADIFTKPL + F + LN+
Sbjct: 1013 VSSENHLADIFTKPLDEQTFCKLHSELNV 1041
>emb|CAE04884.2| OSJNBa0042I15.6 [Oryza sativa (japonica cultivar-group)]
Length = 1510
Score = 943 bits (2437), Expect = 0.0
Identities = 504/1071 (47%), Positives = 667/1071 (62%), Gaps = 73/1071 (6%)
Query: 669 SWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSISINNVWLVD 728
SW +DSGC+ HMTGE+++F +L K G S N+ D
Sbjct: 470 SWVVDSGCTNHMTGERSMFTSLDEKGG------------------------SRENIVFGD 505
Query: 729 GLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVV 788
K L I + + +DD SI FKG ++Y ++F
Sbjct: 506 DGKEKLQFIIRVS---------------IVRDDSSIAFKGVLKGDLYLVDFDVDRVNPEA 550
Query: 789 CLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSF 848
CL++ + W+WH+RL H R ++ + K + + GL N+ + D +C ACQ GK V S
Sbjct: 551 CLIAKSSMGWLWHRRLAHVGMRNLASLLKGEHILGLSNVSFEMDRVCSACQAGKQVGSPH 610
Query: 849 KSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVF 908
K+I++T+RPLELLH+DLFGPV S+ G+KYG VIVDD+S +TWV F+ K A +VF
Sbjct: 611 PIKNIMTTTRPLELLHMDLFGPVAYISIGGNKYGFVIVDDFSCFTWVYFLHDKSEAQDVF 670
Query: 909 SSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKN 968
F Q Q+ +L I +VRSD+GGEF+N E F ++ GI HEFS+P P QNG+VERKN
Sbjct: 671 KRFTKQAQNLYDLTIKRVRSDNGGEFKNTQVEEFLDEEGIKHEFSAPYDPPQNGIVERKN 730
Query: 969 RTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFH 1028
RTL E AR M+ E + FWAEAV+T+C+ NR+Y+ +L+KT+YEL G++PN+SYF
Sbjct: 731 RTLIEAARAMLDEYKTSDVFWAEAVSTACHAINRLYLHKILKKTSYELLSGKKPNVSYFR 790
Query: 1029 QFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREP 1088
FG +IL+ KF K G LGY + AY+V+N +T + +HV D +P
Sbjct: 791 VFGSKFFILSKMPRSSKFSPKVDEGFLLGYESNAHAYRVFN-KTSGEQVVIHV-VRDVDP 848
Query: 1089 GSKTSEQSESNAGTTDSEDASES-DQP--SDSKKYTEVESSPEAEITPEAESNSEAEPSS 1145
++ + +++D E DQP S S T V S+ E E+ + N P
Sbjct: 849 SQAIGTKAIGDIRPVETQDDQEDRDQPPSSTSNSPTSVVSA-EPEVPGPIDRNLRTSPGP 907
Query: 1146 KVQNEIA-------SEDF-------------LDNTQQVIQPKFKH-------KSSHPEEL 1178
+V SED L +T Q P H + HP +
Sbjct: 908 EVPGSTVRNLRTSGSEDVPTAQVDGIDAAGTLGHTDQAQVPLVHHPRIHHTVQRDHPVDN 967
Query: 1179 IIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWD 1238
I+G TRS +S +EP VE+AL D W++AMQEELN F RN VW+
Sbjct: 968 ILGDIRKGVTTRSRVASFCQHYSFVSSLEPTRVEDALGDSDWVMAMQEELNNFARNQVWN 1027
Query: 1239 LVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAI 1298
LV +P Q N+IGTKW+FRNK +E V RNKARLV QG++Q EG+D+ ETFAPVARLE+I
Sbjct: 1028 LVERPKQ-NVIGTKWIFRNKQDEHVVVVRNKARLVTQGFTQVEGLDFGETFAPVARLESI 1086
Query: 1299 RLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLK 1358
R+LL+YA +H L+QMDV+SAFLNG I E VYV+QPPGFED K P+HVYKL K+LYGLK
Sbjct: 1087 RILLAYAAHHDFRLFQMDVKSAFLNGPISELVYVEQPPGFEDPKLPNHVYKLHKALYGLK 1146
Query: 1359 QAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEF 1418
QAPRAWY+ L +FL+KN FE G DTTLF + K D+ I QIYVDDIIFGSTNAS C+EF
Sbjct: 1147 QAPRAWYECLRDFLLKNGFEIGNADTTLFTKKFKSDLFICQIYVDDIIFGSTNASFCEEF 1206
Query: 1419 SKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHP 1478
S +M FEMSMMGEL FFL +Q+ Q++EG ++ QTKY K++LKKF +ED K + TPM
Sbjct: 1207 SSIMTKRFEMSMMGELTFFLWLQVKQAQEGTFISQTKYVKDILKKFGMEDAKPIKTPMPT 1266
Query: 1479 TCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRI 1538
L +D G VDQK+YR MIGSLLYL ASRPDI+ SVC+CARFQ++P+E HL AVKRI
Sbjct: 1267 NGHLDLDDNGKCVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQAEPKECHLIAVKRI 1326
Query: 1539 FRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQA 1598
RYL T NLGL Y K D++L+G+ D+DYAG +++RKS + CQFLG +L+SW K+Q
Sbjct: 1327 QRYLVHTPNLGLWYPKGCDFELLGYSDSDYAGCKVDRKSITGTCQFLGPSLVSWFPKKQN 1386
Query: 1599 TIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRA 1658
+I +ST EAEY++A SCC QLLWMK L+D+ N P+ CDN +AI ++ NP+ HS+
Sbjct: 1387 SIVLSTTEAEYVAAGSCCAQLLWMKQTLKDFGYNFTKTPLLCDNESAIKIANNPVQHSKT 1446
Query: 1659 KHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLN 1709
KHI+I HHF+RD+ KG + + + TE Q ADIFTKPL +RF ++ LN
Sbjct: 1447 KHIDIHHHFLRDHETKGDICLTHVRTETQLADIFTKPLDEKRFCELRSELN 1497
Score = 95.5 bits (236), Expect = 1e-17
Identities = 107/436 (24%), Positives = 181/436 (40%), Gaps = 87/436 (19%)
Query: 52 IMGLDEELWDILEDGVD----DLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIP 107
++ L +W ++ GVD D++L E Q++L ++ + I++++
Sbjct: 5 LISLHPSIWKVVCTGVDVPHDDMELTSE------------QEQLIHRNAQASNAILSTLS 52
Query: 108 RTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEMYSRF 167
E+ K+ AK + +L EGS V+EAK +L + F M D E+ +EMY R
Sbjct: 53 LEEFNKVDGLEEAKEICDTLQLAHEGSPAVREAKIELLEGRLGRFVMDDKETPQEMYDRM 112
Query: 168 QTLVSGLQILKKSYVASDHVSK-ILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVH 226
LV+ ++ L + + V K +LR R V+ I E KD L++ D++ + H
Sbjct: 113 MILVNKIKGLGSEDMTNHFVVKRLLREFGPRNPTLVSMIREKKDFKRLTLSDILGRIVSH 172
Query: 227 EMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKIAMLSNKL 286
EM + E ++K++ + K +K + G D+D+
Sbjct: 173 EM---QEEEARKTR-----------RRVKRFKHFLRKSGYGKGRKDDDK----------- 207
Query: 287 EYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNS 346
KK+ ++ CFNC + GHFIAD P + K KG KK
Sbjct: 208 -------------------GKKQSKRACFNCGEYGHFIADFPKSNEAKAKGGKKKPE--- 245
Query: 347 SKFRKQIKKSLM-ATWEDLDSESGSDKEEADDDAKA-AVGLVATVSSEAVSEAE------ 398
R + ++ M W D E K + K G VATV+ ++ S ++
Sbjct: 246 ---RAHVAEAHMPEVWYSGDEEDPEVKPKPKPKDKVDGEGGVATVTFKSSSSSKERLFNN 302
Query: 399 -SDSEDENEVYS-------KIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKS 450
SD +D++ YS K+ Q+ + ++ S E NEL D+ + + Q +
Sbjct: 303 LSDDDDDSYHYSCFMAQGRKVMTQKPSHTSLDVDSSDEESDNELDDVLKSFSKPAMQHLA 362
Query: 451 TLLE----LKASEEEL 462
L+ LK E L
Sbjct: 363 KLMRALDTLKKENERL 378
>gb|AAW57789.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1799
Score = 930 bits (2404), Expect = 0.0
Identities = 495/1056 (46%), Positives = 678/1056 (63%), Gaps = 49/1056 (4%)
Query: 666 KQRSWYLDSGCSRHMTGEKALFLTLTMKDGGE-VKFGGNQTGKIIGTGTIG-NSSISINN 723
+ SW +DSGCSRHMTGE F +LT G E + FG +G+++ GTI N + +
Sbjct: 775 RSNSWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTIKVNDKFMLKD 834
Query: 724 VWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLA 783
V LV LK+NLLS+SQ CD +V F K +++ + + F RV V+ NF A
Sbjct: 835 VALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVFFANFDSSA 893
Query: 784 DQKVVCLL-SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGK 842
CL+ S N + WH+RLGH + +S+IS + L++GLP + D +C C+ GK
Sbjct: 894 PGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGK 953
Query: 843 IVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYG------SKYGLVIVDDYSRWTWVK 896
+ SS K +V T P +LLH+D GP S+ G + + L++V W W
Sbjct: 954 MTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWRKHLASFSLLLV----VWLWSF 1009
Query: 897 FIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPR 956
+ + +A V + ++I L ++ + S+ H+FSSP
Sbjct: 1010 LVLFEPFA--VIMALNSKI-LHLNLSVILLESN--------------------HQFSSPY 1046
Query: 957 TPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYEL 1016
PQQNGVVERKNRTL EMARTM+ E + FW EA++ +C+I NR+++R +L KT YEL
Sbjct: 1047 VPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYEL 1106
Query: 1017 FKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVE 1076
GRRP +S+ FGC C++L + + L KF++++ GIFLGY+ S+AY+VY T +
Sbjct: 1107 RFGRRPKVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIV 1165
Query: 1077 ESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEIT--PE 1134
E+ V FD+ PG++ + ED+ + D S S ++S+P + T P
Sbjct: 1166 ETCEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSIS---PPLDSTPPVQETGSPL 1222
Query: 1135 AESNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFR 1194
S S P++ + A+E+ T P+ P+ +I G + R RS+
Sbjct: 1223 TTSPSGDAPTT---SSSAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYEL 1279
Query: 1195 QEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWV 1254
+ + + EPK V ALSD+ W+ AM EEL F+RN VW LV P ++IGTKWV
Sbjct: 1280 VNSAFV---ASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFSVIGTKWV 1336
Query: 1255 FRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQ 1314
F+NKL E G + RNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+LL++A + G L+Q
Sbjct: 1337 FKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQ 1396
Query: 1315 MDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1374
MDV+SAFLNGVIEEEVYVKQPPGFE+ K P+HV+KL K+LYGLKQAPRAWY+RL FL++
Sbjct: 1397 MDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQ 1456
Query: 1375 NDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGEL 1434
N FE G VD TLF D L+VQIYVDDIIFG ++ +L +F +M EFEMSMMGEL
Sbjct: 1457 NGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFFDVMSREFEMSMMGEL 1516
Query: 1435 KFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQK 1494
FFLG+QI Q+KEG++VHQTKY+KELLKKF + DCK + TPM T +L ++ G VDQ+
Sbjct: 1517 TFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQR 1576
Query: 1495 LYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRK 1554
YR MIGSLLYLTASRPDI FSVCLCARFQ+ PR SH AVKRIFRY+K T G+ Y
Sbjct: 1577 EYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSC 1636
Query: 1555 SLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAAS 1614
S + F DAD+AG +I+RKSTS C FLG +L+SW+S++Q+++A STAEAEY++AAS
Sbjct: 1637 SSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAAS 1696
Query: 1615 CCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQK 1674
C+Q+LWM L+DY ++ + +P+ CDNT+AI ++KNP+ HSR KHIEI++HF+RD V+K
Sbjct: 1697 ACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEK 1756
Query: 1675 GILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
G + ++F+++E Q ADIFTKPL RF+F++ L +
Sbjct: 1757 GTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELGV 1792
Score = 113 bits (283), Expect = 5e-23
Identities = 116/492 (23%), Positives = 202/492 (40%), Gaps = 56/492 (11%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGV---DDLDLDEEGAAIDRRIHTPAQKKLYK 93
D F WK M +++ +W+ ++ DD+D+ TPA
Sbjct: 13 DGHNFVIWKARMEAYLPSQGHNVWNKVKSPYTVPDDVDI------------TPANMAQVD 60
Query: 94 KHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVH-QYELF 152
+++ R I+ I E+ ++ +A M+ +LC EG+ ++ L H +Y+ F
Sbjct: 61 FNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQ----LNQFHKEYQRF 116
Query: 153 RMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIEEAKDL 211
M ESI+ + RF +VS L+ + K + +D+ +L L W KVT+I E+ L
Sbjct: 117 EMHPGESIDSYFKRFGEIVSKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITESAPL 176
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ L+++ L S LK HEM + + K S ++ G S + A+ + +
Sbjct: 177 SELTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVCGGFSLAALHSVT 236
Query: 272 DEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQ 331
+E Q KI + L ARK + K K + CF C +P H +CP L+
Sbjct: 237 EE-QLEKIP--EDDLALFARKFSRAYKNVRDRKRGKTNEPFVCFECGEPNHIRVNCPKLK 293
Query: 332 KEKFKGKSKKSSFNSSKFRKQIKK----SLMATWEDLD-SESGSDKEEADDDAKAAVGLV 386
K+ K +KK K +K + K ++A E++ S+ SD ++ + K G+
Sbjct: 294 KKSDK-TTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSDDDDQEKGDKDFSGMC 352
Query: 387 ATVSSE--------AVSEAESDSEDENEVYSKIPR------------QELVD---SLKEL 423
++E A+ + + SE IP + VD S + +
Sbjct: 353 CLANNEDFINLCLMALEDKDDSSEHPEVCLDDIPSLDGSLCDDSCSDNDTVDDELSKERM 412
Query: 424 LSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKASEEELKGFNLIST--TYEDRLKSLCQ 481
L +++ K K L + LE+ + + ST +Y + L
Sbjct: 413 AHLMIEISDKYRSSKYKIEKLKSENDGMALEIARLRSMIPEEDTCSTCASYLSEINLLKD 472
Query: 482 KLQEKCDKGSGN 493
KL + C G+GN
Sbjct: 473 KL-KSCTLGAGN 483
>ref|XP_468929.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28209450|gb|AAO37468.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1128
Score = 918 bits (2373), Expect = 0.0
Identities = 478/948 (50%), Positives = 631/948 (66%), Gaps = 15/948 (1%)
Query: 767 KGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPN 826
+GK E K+ F D + + V+ L++ W+WH+RL H +SK+SK LV GL +
Sbjct: 185 EGKEQE---KVTFGDNSKRNVIGLVAKTSFGWLWHRRLAHVGMNQLSKLSKRDLVVGLKD 241
Query: 827 IDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIV 886
+ + D LC ACQ K V S +K I+STSRPLELLH+DLFGP S+ G+ + LVIV
Sbjct: 242 VKFEKDKLCSACQASKQVACSHPTKSIMSTSRPLELLHMDLFGPTTYKSIGGNSHCLVIV 301
Query: 887 DDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKH 946
DDYS +TWV F+ K E+F F + Q+E ++K+RSD+G +F+N E +C+
Sbjct: 302 DDYSCYTWVFFLHDKCIVAELFKKFAKRAQNEFSCTLVKIRSDNGSKFKNTNIEDYCDDL 361
Query: 947 GILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIR 1006
I HE S+ +PQQNGVVERKNRTL EMARTM+ E ++ FWAEA+NT+C+ NR+Y+
Sbjct: 362 SIKHELSATYSPQQNGVVERKNRTLIEMARTMLDEYGVSDSFWAEAINTACHATNRLYLH 421
Query: 1007 PMLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYK 1066
+L+KT+YEL GR+PN++YF FGC CYI L KF+++ G LGY+ SKAY+
Sbjct: 422 RLLKKTSYELIVGRKPNVAYFRVFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYR 481
Query: 1067 VYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESS 1126
VYN VEE+ V+FD+ GS+ ++ + G A ++ D K EVE
Sbjct: 482 VYNKNKGIVEETADVQFDETN-GSQEGHENLDDVGDEGLMRAMKNMSIGDVKPI-EVEDK 539
Query: 1127 PEAEITPEAESNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSS--HPEELIIGSKD 1184
P + + E ++ A PS + Q E+ E D + P+ S HP + ++G
Sbjct: 540 PST--STQDEPSTSASPS-QAQVEVEKEKAQDPP---MPPRIYTALSKDHPIDQVLGDIS 593
Query: 1185 SPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPS 1244
+TRS +S +EPK V+EAL D W+ A+ EELN F RN VW LV +P
Sbjct: 594 KGVQTRSPVASICEHYSFVSCLEPKHVDEALYDPDWMNAIHEELNNFARNKVWTLVERPR 653
Query: 1245 QKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSY 1304
N+IGTKWVFRNK +E V RNKARLVAQG++Q E +D+ ETF PVARLEAIR+LL++
Sbjct: 654 DHNVIGTKWVFRNKQDENRLVVRNKARLVAQGFTQVEDLDFGETFGPVARLEAIRILLAF 713
Query: 1305 AINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAW 1364
A I L+QMDV+SAFLNG I E V+V+QPPGF+D K+P+HVYKL K+LYGLKQAPRAW
Sbjct: 714 ASCFDIKLFQMDVKSAFLNGEIAELVFVEQPPGFDDPKYPNHVYKLSKALYGLKQAPRAW 773
Query: 1365 YDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQD 1424
Y+RL +FL+ DF+ G+VDTTLF + + D + QIYVDDIIFGSTN CKEF +M
Sbjct: 774 YERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSR 833
Query: 1425 EFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSK 1484
EFEMSM+ EL FFLG+QI Q K+G +V QTKY K+LLK+F LED K + TPM L
Sbjct: 834 EFEMSMIEELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNWHLDL 893
Query: 1485 EDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKG 1544
++ G VD KLYR MIGSLLYLTASRPDI+FSVC+ ARFQ+ P+E HL AVKRI RYLK
Sbjct: 894 DEGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKH 953
Query: 1545 TTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMST 1604
++ + L Y K +KL+G+ D+DYAG +++RKSTS +CQ LG +L+SW+SK+Q ++A+ST
Sbjct: 954 SSTISLWYPKGAKFKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALST 1013
Query: 1605 AEAEYISAASCCTQLLWMKHQLEDYQIN--ANSIPIYCDNTAAICLSKNPILHSRAKHIE 1662
AEAEYISA SCC QLLWMK L DY I+ P+ C+N + I ++ NP+ H R KHI+
Sbjct: 1014 AEAEYISAGSCCAQLLWMKQILLDYGISFTETQTPLLCNNDSTIKIANNPVQHFRTKHID 1073
Query: 1663 IKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
I+HHF+ D+V K + I I TE Q ADIFTKPL RF ++ LN+
Sbjct: 1074 IRHHFLTDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNELNV 1121
Score = 38.9 bits (89), Expect = 1.6
Identities = 18/43 (41%), Positives = 27/43 (61%), Gaps = 2/43 (4%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTM--KDGGEVKFGGNQTGKIIG 710
W LDS C++ MTG++A+F T + K+ +V FG N +IG
Sbjct: 162 WVLDSVCTQRMTGDRAMFTTFEVEGKEQEKVTFGDNSKRNVIG 204
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,844,312,558
Number of Sequences: 2540612
Number of extensions: 123215740
Number of successful extensions: 452719
Number of sequences better than 10.0: 6879
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 3649
Number of HSP's that attempted gapping in prelim test: 413503
Number of HSP's gapped (non-prelim): 27780
length of query: 1715
length of database: 863,360,394
effective HSP length: 142
effective length of query: 1573
effective length of database: 502,593,490
effective search space: 790579559770
effective search space used: 790579559770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 83 (36.6 bits)
Medicago: description of AC138453.14