BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138087.2 + phase: 0 /pseudo
(296 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB01962.1| unnamed protein product [Arabidopsis thaliana] 136 8e-31
gb|AAO22586.1| unknown protein [Arabidopsis thaliana] gi|1232202... 136 8e-31
emb|CAB88266.1| putative protein [Arabidopsis thaliana] gi|11358... 135 2e-30
ref|NP_196806.2| emsy N terminus domain-containing protein / ENT... 135 2e-30
ref|XP_507196.1| PREDICTED P0670E08.30 gene product [Oryza sativ... 131 3e-29
ref|XP_450476.1| emsy N terminus domain-containing protein-like ... 129 1e-28
ref|NP_181972.2| emsy N terminus domain-containing protein / ENT... 110 6e-23
dbj|BAD43579.1| unnamed protein product [Arabidopsis thaliana] 110 6e-23
gb|AAL87186.1| unknown [Oryza sativa (japonica cultivar-group)] ... 102 2e-20
gb|AAM62778.1| unknown [Arabidopsis thaliana] 99 1e-19
gb|AAM78061.1| AT5g06780/MPH15_14 [Arabidopsis thaliana] gi|9759... 99 1e-19
gb|AAC16090.1| hypothetical protein [Arabidopsis thaliana] gi|74... 78 3e-13
ref|XP_483292.1| unknown protein [Oryza sativa (japonica cultiva... 49 2e-04
dbj|BAD44142.1| unnamed protein product [Arabidopsis thaliana] 47 7e-04
ref|XP_327326.1| predicted protein [Neurospora crassa] gi|289237... 41 0.047
ref|XP_540777.1| PREDICTED: similar to Mucin 5B precursor (Mucin... 39 0.23
ref|NP_033902.1| budding uninhibited by benzimidazoles 1 homolog... 37 0.52
ref|XP_531681.1| PREDICTED: similar to TBC1 domain family, membe... 37 0.52
emb|CAB80700.1| G/T DNA mismatch repair enzyme [Arabidopsis thal... 37 0.68
gb|AAC53533.1| protein kinase [Mus musculus] gi|7513785|pir||T31... 37 0.68
>dbj|BAB01962.1| unnamed protein product [Arabidopsis thaliana]
Length = 383
Score = 136 bits (342), Expect = 8e-31
Identities = 79/154 (51%), Positives = 92/154 (59%), Gaps = 22/154 (14%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
ESLITEL ELRVSD+EHRELL RVN D I R RDWR+ G Q T QP D+LPS
Sbjct: 32 ESLITELRKELRVSDDEHRELLSRVNKDDTIQRIRDWRQGGASQITRHATIQP-FDVLPS 90
Query: 89 PTVSASNKKPKTSHSVPPSLGQSLPGLSSVKPVQCASTGPTGARHFSNHNSSSNLNAPAE 148
PT SA+ KK KT S PS+ G TG R F+N SS ++
Sbjct: 91 PTFSAARKKQKTFPSYNPSI------------------GATGNRSFNNRLVSSGISG--- 129
Query: 149 EAQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE 182
+ LIG+KVWT+WPED+HFYEA+IT YN DE
Sbjct: 130 NESAEALIGRKVWTKWPEDNHFYEAIITQYNADE 163
>gb|AAO22586.1| unknown protein [Arabidopsis thaliana] gi|12322022|gb|AAG51060.1|
unknown protein; 11168-13185 [Arabidopsis thaliana]
gi|15229958|ref|NP_187821.1| emsy N terminus
domain-containing protein / ENT domain-containing
protein [Arabidopsis thaliana]
gi|30682067|ref|NP_850568.1| emsy N terminus
domain-containing protein / ENT domain-containing
protein [Arabidopsis thaliana]
Length = 327
Score = 136 bits (342), Expect = 8e-31
Identities = 79/154 (51%), Positives = 92/154 (59%), Gaps = 22/154 (14%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
ESLITEL ELRVSD+EHRELL RVN D I R RDWR+ G Q T QP D+LPS
Sbjct: 32 ESLITELRKELRVSDDEHRELLSRVNKDDTIQRIRDWRQGGASQITRHATIQP-FDVLPS 90
Query: 89 PTVSASNKKPKTSHSVPPSLGQSLPGLSSVKPVQCASTGPTGARHFSNHNSSSNLNAPAE 148
PT SA+ KK KT S PS+ G TG R F+N SS ++
Sbjct: 91 PTFSAARKKQKTFPSYNPSI------------------GATGNRSFNNRLVSSGISG--- 129
Query: 149 EAQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE 182
+ LIG+KVWT+WPED+HFYEA+IT YN DE
Sbjct: 130 NESAEALIGRKVWTKWPEDNHFYEAIITQYNADE 163
>emb|CAB88266.1| putative protein [Arabidopsis thaliana] gi|11358228|pir||T49916
hypothetical protein T24H18.190 - Arabidopsis thaliana
Length = 414
Score = 135 bits (339), Expect = 2e-30
Identities = 84/178 (47%), Positives = 102/178 (57%), Gaps = 33/178 (18%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
ESLITEL ELRVSDEEHRELL RVN+D +I R R+WR+ Q + Q VHD PS
Sbjct: 81 ESLITELRKELRVSDEEHRELLSRVNADEMIRRIREWRKANSLQS---SVPQLVHDA-PS 136
Query: 89 PTVSASNKKPKTSHSVP--------PSLGQSL-------------PGLSSVKP---VQCA 124
P VS S KK KTS S+ PSL S+ PG + KP +Q
Sbjct: 137 PAVSGSRKKQKTSQSIASLAMGPPSPSLHPSMQPSSSALRRGGPPPGPKTKKPKTSMQYP 196
Query: 125 STGPTGARHFSNHNSSSNLNAPAEEAQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE 182
STG G + + N P E +DPL+G+KVWT+WP+D+ +YEAVITDYNP E
Sbjct: 197 STGIAG-----RPQAGALTNEPGESGSYDPLVGRKVWTKWPDDNQYYEAVITDYNPVE 249
>ref|NP_196806.2| emsy N terminus domain-containing protein / ENT domain-containing
protein [Arabidopsis thaliana]
Length = 397
Score = 135 bits (339), Expect = 2e-30
Identities = 84/178 (47%), Positives = 102/178 (57%), Gaps = 33/178 (18%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
ESLITEL ELRVSDEEHRELL RVN+D +I R R+WR+ Q + Q VHD PS
Sbjct: 81 ESLITELRKELRVSDEEHRELLSRVNADEMIRRIREWRKANSLQS---SVPQLVHDA-PS 136
Query: 89 PTVSASNKKPKTSHSVP--------PSLGQSL-------------PGLSSVKP---VQCA 124
P VS S KK KTS S+ PSL S+ PG + KP +Q
Sbjct: 137 PAVSGSRKKQKTSQSIASLAMGPPSPSLHPSMQPSSSALRRGGPPPGPKTKKPKTSMQYP 196
Query: 125 STGPTGARHFSNHNSSSNLNAPAEEAQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE 182
STG G + + N P E +DPL+G+KVWT+WP+D+ +YEAVITDYNP E
Sbjct: 197 STGIAG-----RPQAGALTNEPGESGSYDPLVGRKVWTKWPDDNQYYEAVITDYNPVE 249
>ref|XP_507196.1| PREDICTED P0670E08.30 gene product [Oryza sativa (japonica
cultivar-group)] gi|50944239|ref|XP_481647.1| unknown
protein [Oryza sativa (japonica cultivar-group)]
gi|38637370|dbj|BAD03630.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|38637206|dbj|BAD03457.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 458
Score = 131 bits (329), Expect = 3e-29
Identities = 91/223 (40%), Positives = 114/223 (50%), Gaps = 48/223 (21%)
Query: 1 MEVQSHQLGRCILCCLVCF*SSVRCSYL---ESLITELGIELRVSDEEHRELLGRVNSD* 57
ME Q HQL + C ++ + + E LITEL ELRVSD+EHRELL RVN D
Sbjct: 52 METQIHQLEQDAYCSVLRAFKAQSDAISWEKEGLITELRKELRVSDKEHRELLNRVNGDD 111
Query: 58 IIHRTRDWRET-GIYQPPGCTTSQPVHDILPSPTVSASNKKPKTSHSVPPSL-------- 108
II R R+WRET G Q +Q HD +PSPT SA K+ KTS S+P +
Sbjct: 112 IIQRIREWRETKGGLQADMVNNAQRSHDRVPSPTTSA-RKRQKTSQSIPSASVPVPSPAV 170
Query: 109 -------------------------------GQSLPGLSSVKPVQCASTGPTGARHFSNH 137
GQ +PG S++K + +S GP+G N
Sbjct: 171 HSQTLTAPMQPLSSATKKVAPPGTKGKKTKPGQKIPGGSAIKTM--SSAGPSGRGPIMNK 228
Query: 138 NSSSNLNAPAEEAQFDPLIGKKVWTRWPEDSHFYEAVITDYNP 180
N S L P E +PLIG+KV TRWP+D+ FYEAVITDY+P
Sbjct: 229 NLSGGL--PTEPISVNPLIGRKVMTRWPDDNSFYEAVITDYDP 269
>ref|XP_450476.1| emsy N terminus domain-containing protein-like [Oryza sativa
(japonica cultivar-group)] gi|49388834|dbj|BAD26024.1|
emsy N terminus domain-containing protein-like [Oryza
sativa (japonica cultivar-group)]
Length = 409
Score = 129 bits (324), Expect = 1e-28
Identities = 107/293 (36%), Positives = 136/293 (45%), Gaps = 62/293 (21%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
E LITEL ELRVSD +HRELL RVNSD II R+WR G Q +QP+HD+ PS
Sbjct: 32 EGLITELRKELRVSDVDHRELLNRVNSDDIIRSIREWRSAGGPQAMLPNNAQPMHDLAPS 91
Query: 89 PTVSASNKKPKTSHSVP-------------------PSL------------------GQS 111
PT S K+ KTS S P PS GQ
Sbjct: 92 PTTSG-RKRQKTSQSFPALPAPPPVMHSQQLALQGPPSSSTAKKGASSGAKGKKTKPGQK 150
Query: 112 LPGLSSVKPVQCASTGPTGARHFSNHNSSSNLNA--PAEEAQFDPLIGKKVWTRWPEDSH 169
+PG SVK + +S GP+G N N L + P+E +PLI +KV +RWPED+
Sbjct: 151 VPGGPSVKAMT-SSAGPSGRGPHMNRNFPVGLVSFEPSEALHINPLINRKVMSRWPEDNS 209
Query: 170 FYEAVITDYNPDE*HVHILQG*YSLLEVS--------LG*YNIT*G------YTMGR*RS 215
FYEA ITDYNP E ++ L + S +G +I Y R
Sbjct: 210 FYEATITDYNP-ETDLYALAYDINTANESWEWVDLKQMGPEDIRWQGDDPGIYQGVRGAP 268
Query: 216 GHTT*RLTQRARPWS*EILWLGAGRGKGHPRFHSRKELMPPQDGIGNRVPNGI 268
G + + R P G GRG+G P+ SRK+ P Q+G+G R + I
Sbjct: 269 GSGGKKSSSRGGPTP------GTGRGRGLPKHVSRKDFPPSQNGVGKRSSDDI 315
>ref|NP_181972.2| emsy N terminus domain-containing protein / ENT domain-containing
protein [Arabidopsis thaliana]
Length = 429
Score = 110 bits (274), Expect = 6e-23
Identities = 71/192 (36%), Positives = 96/192 (49%), Gaps = 38/192 (19%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
ES+ITEL EL +S+EEHRELLGRVNSD I R R+WR++G QP +Q VHD LPS
Sbjct: 88 ESVITELRKELSLSNEEHRELLGRVNSDDTIRRIREWRQSGGMQPSMRNAAQVVHDTLPS 147
Query: 89 PTVSASNKKPKTSHSVP------------PSLGQSLPGLSSV-----------KPVQCAS 125
P+VSAS K K + +P P + P SS K +
Sbjct: 148 PSVSASMKTHKPNQPIPSQPFASSSPSFHPQADPTHPFASSTAKRGPVPIVKGKKHKPVF 207
Query: 126 TGPTGARHFSNHNSS---------------SNLNAPAEEAQFDPLIGKKVWTRWPEDSHF 170
G + +H H S ++ + P + +G++V T+WPED+ F
Sbjct: 208 PGSSSTKHAPYHPSDQPPRGQVMNRLPSVPASSSEPTNGIDPESFLGRRVRTKWPEDNTF 267
Query: 171 YEAVITDYNPDE 182
Y+A+IT YNP E
Sbjct: 268 YDAIITQYNPVE 279
>dbj|BAD43579.1| unnamed protein product [Arabidopsis thaliana]
Length = 429
Score = 110 bits (274), Expect = 6e-23
Identities = 71/192 (36%), Positives = 96/192 (49%), Gaps = 38/192 (19%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
ES+ITEL EL +S+EEHRELLGRVNSD I R R+WR++G QP +Q VHD LPS
Sbjct: 88 ESVITELRKELSLSNEEHRELLGRVNSDDTIRRIREWRQSGGMQPSMRNAAQVVHDTLPS 147
Query: 89 PTVSASNKKPKTSHSVP------------PSLGQSLPGLSSV-----------KPVQCAS 125
P+VSAS K K + +P P + P SS K +
Sbjct: 148 PSVSASMKTHKPNQPIPSQPFASSSPSFHPQADPTHPFASSTAKRGPVPIVKGKKHKPVF 207
Query: 126 TGPTGARHFSNHNSS---------------SNLNAPAEEAQFDPLIGKKVWTRWPEDSHF 170
G + +H H S ++ + P + +G++V T+WPED+ F
Sbjct: 208 PGSSSTKHAPYHPSDQPPRGQVMNRLPSVPASSSEPTNGIDPESFLGRRVRTKWPEDNTF 267
Query: 171 YEAVITDYNPDE 182
Y+A+IT YNP E
Sbjct: 268 YDAIITQYNPVE 279
>gb|AAL87186.1| unknown [Oryza sativa (japonica cultivar-group)]
gi|50929351|ref|XP_474203.1| OSJNBa0011F23.19 [Oryza
sativa (japonica cultivar-group)]
gi|38346413|emb|CAE54578.1| OSJNBa0011F23.19 [Oryza
sativa (japonica cultivar-group)]
gi|38345196|emb|CAE02889.2| OSJNBa0015K02.6 [Oryza
sativa (japonica cultivar-group)]
Length = 397
Score = 102 bits (253), Expect = 2e-20
Identities = 64/155 (41%), Positives = 81/155 (51%), Gaps = 11/155 (7%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
ESLITEL ELRVSD+EHRELL +VN D I R R++R+ G S+ HD P
Sbjct: 80 ESLITELRKELRVSDDEHRELLNKVNEDVAIRRMREFRQGGGSLSAQHRGSRIFHDTEPG 139
Query: 89 PTVSASNKKPKTSHSVPP-SLGQSLPGLSSVKPVQCASTGPTGARHFSNHNSSSNLNAPA 147
P K+ +T S+P S G P + S GP + N P
Sbjct: 140 PAA----KRQRTPLSIPSHSAGLQSPAMPSPSVPSSTKWGPFS----GTKGKKTRTNTPL 191
Query: 148 EEAQFDP--LIGKKVWTRWPEDSHFYEAVITDYNP 180
DP LI +K++TRWP+D++FYEA ITDYNP
Sbjct: 192 AVPSADPTSLINRKIYTRWPDDNNFYEATITDYNP 226
>gb|AAM62778.1| unknown [Arabidopsis thaliana]
Length = 313
Score = 99.4 bits (246), Expect = 1e-19
Identities = 64/153 (41%), Positives = 84/153 (54%), Gaps = 30/153 (19%)
Query: 30 SLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPSP 89
+++T L ELR+SD+E+R+LL V++D +I R RD R G Q D+ PSP
Sbjct: 33 TVMTNLRKELRISDDENRQLLNNVHNDDLIKRIRDSRPRGGNQ----VVRHQSLDVHPSP 88
Query: 90 TVSASNKKPKTSHSVPPSLGQSLPGLSSVKPVQCASTGPTGARHFSNHNSSSNLNAPAEE 149
T SAS KK KT S P S G T ++ F+N S+N PAE
Sbjct: 89 TFSASRKKQKTFQSYP-------------------SIGSTRSKSFNNRVVSAN--EPAEA 127
Query: 150 AQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE 182
LIG+KVWT+WPED+ FYEAV+T YN +E
Sbjct: 128 -----LIGRKVWTKWPEDNSFYEAVVTQYNANE 155
>gb|AAM78061.1| AT5g06780/MPH15_14 [Arabidopsis thaliana]
gi|9759306|dbj|BAB09812.1| unnamed protein product
[Arabidopsis thaliana] gi|15240146|ref|NP_196296.1| emsy
N terminus domain-containing protein / ENT
domain-containing protein [Arabidopsis thaliana]
gi|16226579|gb|AAL16205.1| AT5g06780/MPH15_14
[Arabidopsis thaliana]
Length = 320
Score = 99.4 bits (246), Expect = 1e-19
Identities = 64/153 (41%), Positives = 84/153 (54%), Gaps = 30/153 (19%)
Query: 30 SLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPSP 89
+++T L ELR+SD+E+R+LL V++D +I R RD R G Q D+ PSP
Sbjct: 40 TVMTNLRKELRISDDENRQLLNNVHNDDLIKRIRDSRPRGGNQ----VVRHQSLDVHPSP 95
Query: 90 TVSASNKKPKTSHSVPPSLGQSLPGLSSVKPVQCASTGPTGARHFSNHNSSSNLNAPAEE 149
T SAS KK KT S P S G T ++ F+N S+N PAE
Sbjct: 96 TFSASRKKQKTFQSYP-------------------SIGSTRSKSFNNRVVSAN--EPAEA 134
Query: 150 AQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE 182
LIG+KVWT+WPED+ FYEAV+T YN +E
Sbjct: 135 -----LIGRKVWTKWPEDNSFYEAVVTQYNANE 162
>gb|AAC16090.1| hypothetical protein [Arabidopsis thaliana] gi|7486432|pir||T02399
hypothetical protein At2g44440 [imported] - Arabidopsis
thaliana
Length = 343
Score = 78.2 bits (191), Expect = 3e-13
Identities = 65/192 (33%), Positives = 84/192 (42%), Gaps = 38/192 (19%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRD----------------WRETGIY- 71
ES+ITEL EL +S+EEHRELLGRVNSD I R R WR Y
Sbjct: 62 ESVITELRKELSLSNEEHRELLGRVNSDDTIRRIRQDLKSEHLSDEQGMETIWRNAAKYA 121
Query: 72 ----------QPPGCTTSQPVHDILPSPTVSASNKKPKTSHS-----VPPSLGQS----L 112
+P SQP PS A P S + VP G+
Sbjct: 122 QCCSTSMKTHKPNQPIPSQPFASSSPSFHPQADPTHPFASSTAKRGPVPIVKGKKHKPVF 181
Query: 113 PGLSSVK--PVQCASTGPTGARHFSNHNSSSNLNAPAEEAQFDPLIGKKVWTRWPEDSHF 170
PG SS K P + P G + ++ + P + +G++V T+WPED+ F
Sbjct: 182 PGSSSTKHAPYHPSDQPPRGQVMNRLPSVPASSSEPTNGIDPESFLGRRVRTKWPEDNTF 241
Query: 171 YEAVITDYNPDE 182
Y+A+IT YNP E
Sbjct: 242 YDAIITQYNPVE 253
>ref|XP_483292.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|51965012|ref|XP_507290.1| PREDICTED OSJNBa0016N23.123
gene product [Oryza sativa (japonica cultivar-group)]
gi|42407530|dbj|BAD10736.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 272
Score = 48.5 bits (114), Expect = 2e-04
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 29 ESLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPS 88
ESLITEL EL++SD+EHR LL V + + R R R+TG Q S VH +P+
Sbjct: 74 ESLITELRKELQISDKEHRVLLKGVTEEEAVCRIRQSRQTGGTQ-SSSHHSSVVHTPVPA 132
Query: 89 PTVSASNKKPKTSHSVP 105
K+ K SHSVP
Sbjct: 133 -------KRQKKSHSVP 142
>dbj|BAD44142.1| unnamed protein product [Arabidopsis thaliana]
Length = 251
Score = 47.0 bits (110), Expect = 7e-04
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 14/98 (14%)
Query: 87 PSPTVSASNKKPKTSHSVPPSLGQSLPGLSSVK--PVQCASTGPTGARHFSNHNSSSNLN 144
P P V KP PG SS K P + P G + ++ +
Sbjct: 16 PVPIVKGKKHKPV------------FPGSSSTKHAPYHPSDQPPRGQVMNRLPSVPASSS 63
Query: 145 APAEEAQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE 182
P + +G++V T+WPED+ FY+A+IT YNP E
Sbjct: 64 EPTNGIDPESFLGRRVRTKWPEDNTFYDAIITQYNPVE 101
>ref|XP_327326.1| predicted protein [Neurospora crassa] gi|28923777|gb|EAA32943.1|
predicted protein [Neurospora crassa]
Length = 152
Score = 40.8 bits (94), Expect = 0.047
Identities = 23/76 (30%), Positives = 38/76 (49%), Gaps = 1/76 (1%)
Query: 72 QPPGCTTSQPVHDILPSPTVSASNKKPKTSHSVPPSLGQSLPGLSSVKPVQCASTGPTGA 131
QP + S PV L +S + T SVP ++ LPG++S+ +T T
Sbjct: 9 QPAAASPSLPVPTTLEPEPISRPSST-STQASVPQNMSHMLPGIASIATTTTTTTTTTVT 67
Query: 132 RHFSNHNSSSNLNAPA 147
+ +N+N+++N N PA
Sbjct: 68 TNNNNNNNNNNNNTPA 83
>ref|XP_540777.1| PREDICTED: similar to Mucin 5B precursor (Mucin 5 subtype B,
tracheobronchial) (High molecular weight salivary mucin
MG1) (Sublingual gland mucin) [Canis familiaris]
Length = 4089
Score = 38.5 bits (88), Expect = 0.23
Identities = 24/77 (31%), Positives = 37/77 (47%), Gaps = 2/77 (2%)
Query: 67 ETGIYQPPGCTTSQPVHDILPSPTVSASNKKPKTSHSVPPSLGQSLPGLSSVK--PVQCA 124
E+ + PP + S P + +P S+ + P++S S PP S+P SSV P
Sbjct: 3244 ESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSASMPPESSVSTPPESSV 3303
Query: 125 STGPTGARHFSNHNSSS 141
ST P + S +S+S
Sbjct: 3304 STPPESSASRSPESSAS 3320
Score = 35.8 bits (81), Expect = 1.5
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 67 ETGIYQPPGCTTSQPVHDILPSPTVSASNKKPKTSHSVPPSLGQSLP--GLSSVKPVQCA 124
E+ + PP + S P + +P S+ + P++S S PP S P +S+ P
Sbjct: 3236 ESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSASMPPESSV 3295
Query: 125 STGPTGARHFSNHNSSSNLNAPAEEAQFDPL 155
ST P + S SS +P A P+
Sbjct: 3296 STPPESS--VSTPPESSASRSPESSASTSPI 3324
Score = 34.3 bits (77), Expect = 4.4
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 67 ETGIYQPPGCTTSQPVHDILPSPTVSASNKKPKTSHSVPPSLGQSLPGLSSVK--PVQCA 124
E+ + PP + S P + +P S+ + P++S S PP S P SSV P A
Sbjct: 3228 ESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSA 3287
Query: 125 STGPTGARHFSNHNSSSNLNAPAEEAQFDP 154
S P + S SS P A P
Sbjct: 3288 SMPPESS--VSTPPESSVSTPPESSASRSP 3315
Score = 33.5 bits (75), Expect = 7.5
Identities = 24/84 (28%), Positives = 38/84 (44%), Gaps = 5/84 (5%)
Query: 73 PPGCTTSQPVHDILPSPTVSASNKKPKTSHSVPPSLGQSLPGLSSVK--PVQCASTGPTG 130
PP + S P + +P S+ + P++S S PP S P SSV P ST P
Sbjct: 3226 PPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPESSVSTPPES 3285
Query: 131 ARHFSNHNSSSNLNAPAEEAQFDP 154
+ ++ S+++ P E + P
Sbjct: 3286 S---ASMPPESSVSTPPESSVSTP 3306
>ref|NP_033902.1| budding uninhibited by benzimidazoles 1 homolog [Mus musculus]
gi|8134346|sp|O08901|BUB1_MOUSE Mitotic checkpoint
serine/threonine-protein kinase BUB1 (MBUB1) (BUB1A)
gi|2150136|gb|AAC53226.1| mitotic checkpoint protein
kinase [Mus musculus]
Length = 1058
Score = 37.4 bits (85), Expect = 0.52
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 11/156 (7%)
Query: 30 SLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPSP 89
S I + GI ++ E +ELL + +R R TGI+ P TTS+P+H
Sbjct: 119 SAIFQTGIH---NEAEPKELLQQQ------YRLFQARLTGIHLPAQATTSEPLHSAQILN 169
Query: 90 TVSASNKKP-KTSHSVPPSLGQSLPGLSSVKPVQCASTGPTGARHFSNHNSSSNLNAPAE 148
V +N P K S VP S G G++S + ++ + S S+ AP
Sbjct: 170 QVMMTNSSPEKNSACVPKSQGSECSGVASSTCDEKSNMEQRVIMISKSECSVSSSVAPKP 229
Query: 149 EAQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE*H 184
EAQ + K+ R + F E YN + H
Sbjct: 230 EAQ-QVMYCKEKLIRGDSEFSFEELRAQKYNQRKKH 264
>ref|XP_531681.1| PREDICTED: similar to TBC1 domain family, member 15 [Canis
familiaris]
Length = 1256
Score = 37.4 bits (85), Expect = 0.52
Identities = 19/56 (33%), Positives = 25/56 (43%), Gaps = 1/56 (1%)
Query: 73 PPGCTTSQPVHDILPSPTVSASNKKPKTSHSVPPSLGQSLPGLSSVKPVQCASTGP 128
PPGC P ++LP + S P +PP + PG S KP+ CA P
Sbjct: 397 PPGCAPGDP-REVLPGDSGMCSRGPPGKCSWMPPGCTRGTPGKCSWKPLGCAPGDP 451
>emb|CAB80700.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|5763966|emb|CAB53337.1| mismatch repair protein
msh6-1 [Arabidopsis thaliana]
gi|15235223|ref|NP_192116.1| DNA mismatch repair protein
MSH6-1 (MSH6-1) (AGAA.3) [Arabidopsis thaliana]
gi|3912921|gb|AAC78699.1| G/T DNA mismatch repair enzyme
[Arabidopsis thaliana] gi|7487955|pir||T01508 mismatch
repair enzyme T10M13.8 - Arabidopsis thaliana
gi|6226648|sp|O04716|MSH6_ARATH DNA mismatch repair
protein MSH6-1 (AtMsh6-1)
Length = 1324
Score = 37.0 bits (84), Expect = 0.68
Identities = 32/115 (27%), Positives = 45/115 (38%), Gaps = 19/115 (16%)
Query: 87 PSPTVSASNKK-----------PKTSHSVPPSLGQSLPGLSSVKPVQCASTGPTGARHFS 135
PSP+ S SNKK P S S P + P SS P + S GP
Sbjct: 37 PSPSPSLSNKKTPKSNNPNPKSPSPSPSPPKKTPKLNPNPSSNLPARSPSPGPDTPSPVQ 96
Query: 136 NHNSSSNL-----NAPAEEAQF---DPLIGKKVWTRWPEDSHFYEAVITDYNPDE 182
+ L +P + D ++GK+V WP D +Y+ +T Y+ E
Sbjct: 97 SKFKKPLLVIGQTPSPPQSVVITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGE 151
>gb|AAC53533.1| protein kinase [Mus musculus] gi|7513785|pir||T31004 probable
mitotic checkpoint control protein kinase BUB1 - mouse
(fragment)
Length = 1102
Score = 37.0 bits (84), Expect = 0.68
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 11/156 (7%)
Query: 30 SLITELGIELRVSDEEHRELLGRVNSD*IIHRTRDWRETGIYQPPGCTTSQPVHDILPSP 89
S I + GI ++ E +ELL + +R R TGI+ P TTS+P+H
Sbjct: 163 SAIFQTGIH---NEAEPKELLQQQ------YRLFQARLTGIHLPAQATTSEPLHSAQILN 213
Query: 90 TVSASNKKP-KTSHSVPPSLGQSLPGLSSVKPVQCASTGPTGARHFSNHNSSSNLNAPAE 148
V +N P K S VP S G G++S + ++ + S S+ AP
Sbjct: 214 QVMMTNSSPEKNSACVPRSQGSECSGVASSTCDEKSNMEQRVIMISKSECSVSSSVAPKP 273
Query: 149 EAQFDPLIGKKVWTRWPEDSHFYEAVITDYNPDE*H 184
EAQ + K+ R + F E YN + H
Sbjct: 274 EAQ-QVMYCKEKLIRGDSEFSFEELRAQKYNQRKKH 308
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.335 0.147 0.499
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 512,720,865
Number of Sequences: 2540612
Number of extensions: 21975927
Number of successful extensions: 91633
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 91303
Number of HSP's gapped (non-prelim): 262
length of query: 296
length of database: 863,360,394
effective HSP length: 127
effective length of query: 169
effective length of database: 540,702,670
effective search space: 91378751230
effective search space used: 91378751230
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 74 (33.1 bits)
Medicago: description of AC138087.2