BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137838.7 + phase: 0 
         (692 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAA96522.1| AMP-binding protein [Brassica napus] gi|7437846|...    41  0.11
gb|AAF23219.1| putative long-chain-fatty-acid--CoA ligase [Arabi...    38  0.97
gb|AAM28873.1| long chain acyl-CoA synthetase 6 [Arabidopsis tha...    38  0.97
gb|AAM19792.1| AT3g05970/F2O10_9 [Arabidopsis thaliana] gi|18397...    38  0.97
dbj|BAB40450.1| long-chain acyl-CoA synthetase [Arabidopsis thal...    38  0.97

>emb|CAA96522.1| AMP-binding protein [Brassica napus] gi|7437846|pir||T07944
          probable long-chain-fatty-acid-CoA ligase (EC 6.2.1.3)
          - rape
          Length = 677

 Score = 41.2 bits (95), Expect = 0.11
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 1  MDPTPTAQRRLKAINAHLITAVEDNSSDHLQSNPTAGEFF 40
          MD T  A+RR+ AI++HL+T+   +S   L SNPTAGEF+
Sbjct: 1  MDSTSAARRRINAIHSHLVTS-SRSSPLLLSSNPTAGEFY 39


>gb|AAF23219.1| putative long-chain-fatty-acid--CoA ligase [Arabidopsis thaliana]
          Length = 657

 Score = 38.1 bits (87), Expect = 0.97
 Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 2/33 (6%)

Query: 7  AQRRLKAINAHLITAVEDNSSDHLQSNPTAGEF 39
          A+RR+ AI++HL+T+    SS  L+SNPTAGEF
Sbjct: 12 ARRRINAIHSHLVTS--SRSSPLLRSNPTAGEF 42


>gb|AAM28873.1| long chain acyl-CoA synthetase 6 [Arabidopsis thaliana]
          Length = 701

 Score = 38.1 bits (87), Expect = 0.97
 Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 2/33 (6%)

Query: 7  AQRRLKAINAHLITAVEDNSSDHLQSNPTAGEF 39
          A+RR+ AI++HL+T+    SS  L+SNPTAGEF
Sbjct: 12 ARRRINAIHSHLVTS--SRSSPLLRSNPTAGEF 42


>gb|AAM19792.1| AT3g05970/F2O10_9 [Arabidopsis thaliana]
          gi|18397422|ref|NP_566265.1| long-chain-fatty-acid--CoA
          ligase / long-chain acyl-CoA synthetase (LACS6)
          [Arabidopsis thaliana] gi|24796992|gb|AAN64508.1|
          At3g05970/F2O10_9 [Arabidopsis thaliana]
          Length = 701

 Score = 38.1 bits (87), Expect = 0.97
 Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 2/33 (6%)

Query: 7  AQRRLKAINAHLITAVEDNSSDHLQSNPTAGEF 39
          A+RR+ AI++HL+T+    SS  L+SNPTAGEF
Sbjct: 12 ARRRINAIHSHLVTS--SRSSPLLRSNPTAGEF 42


>dbj|BAB40450.1| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
          Length = 701

 Score = 38.1 bits (87), Expect = 0.97
 Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 2/33 (6%)

Query: 7  AQRRLKAINAHLITAVEDNSSDHLQSNPTAGEF 39
          A+RR+ AI++HL+T+    SS  L+SNPTAGEF
Sbjct: 12 ARRRINAIHSHLVTS--SRSSPLLRSNPTAGEF 42


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.358    0.158    0.552 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 930,963,149
Number of Sequences: 2540612
Number of extensions: 31685702
Number of successful extensions: 131414
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 131409
Number of HSP's gapped (non-prelim): 5
length of query: 692
length of database: 863,360,394
effective HSP length: 135
effective length of query: 557
effective length of database: 520,377,774
effective search space: 289850420118
effective search space used: 289850420118
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 79 (35.0 bits)