BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137829.8 - phase: 0
(123 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN62354.1| CTV.22 [Poncirus trifoliata] 166 9e-41
ref|NP_173030.1| expressed protein [Arabidopsis thaliana] 136 1e-31
ref|XP_483828.1| putative CTV.22 [Oryza sativa (japonica cultiva... 135 3e-31
gb|AAN62347.1| CTV.20 [Poncirus trifoliata] 129 2e-29
pir||B86292 F7H2.12 protein - Arabidopsis thaliana gi|8927657|gb... 120 8e-27
gb|AAG48787.1| unknown protein [Arabidopsis thaliana] gi|2232959... 91 8e-18
emb|CAA21993.1| possible regulatory protein [Candida albicans] g... 53 2e-06
gb|EAK98679.1| hypothetical protein CaO19.5105 [Candida albicans... 53 2e-06
gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] gi|25... 49 4e-05
ref|XP_482089.1| hypothetical protein [Oryza sativa (japonica cu... 48 5e-05
ref|XP_566402.1| ENSANGP00000025904 [Anopheles gambiae str. PEST... 43 0.002
ref|XP_483400.1| hypothetical protein [Oryza sativa (japonica cu... 42 0.003
gb|AAS51511.1| ACR285Cp [Ashbya gossypii ATCC 10895] gi|45185971... 42 0.004
emb|CAG98131.1| GALY_KLULA [Kluyveromyces lactis NRRL Y-1140] gi... 39 0.022
gb|EAA62366.1| hypothetical protein AN5185.2 [Aspergillus nidula... 37 0.084
emb|CAG88858.1| unnamed protein product [Debaryomyces hansenii C... 37 0.11
ref|NP_217566.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PR... 36 0.24
ref|XP_481165.1| hypothetical protein [Oryza sativa (japonica cu... 35 0.32
gb|EAL31449.1| GA13644-PA [Drosophila pseudoobscura] 35 0.32
gb|AAH46689.1| A730034c02-prov protein [Xenopus laevis] 35 0.42
>gb|AAN62354.1| CTV.22 [Poncirus trifoliata]
Length = 1405
Score = 166 bits (421), Expect = 9e-41
Identities = 82/116 (70%), Positives = 96/116 (82%), Gaps = 1/116 (0%)
Query: 1 MVTNNWRPNQGA-EPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKI 59
M TNNWRP E N+DT DWR QLQP+SRQRIVNKIMDTLKRHLP SGQ+GL+EL+KI
Sbjct: 16 MDTNNWRPTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKI 75
Query: 60 AQKFEDKIYTAATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQVGPSNQPPYPG 115
A +FE+KIYTAA+SQSDYLRKISLKML+ME+KSQ + N++ N G SN+PP PG
Sbjct: 76 AGRFEEKIYTAASSQSDYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG 131
>ref|NP_173030.1| expressed protein [Arabidopsis thaliana]
Length = 1335
Score = 136 bits (343), Expect = 1e-31
Identities = 70/119 (58%), Positives = 87/119 (72%), Gaps = 15/119 (12%)
Query: 1 MVTNNWRPN-QGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKI 59
M NNWRP+ EP MDT DWR QL P+SRQ+IVNKIM+TLK+HLP SG EG++ELR+I
Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60
Query: 60 AQKFEDKIYTAATSQSDYLRKISLKMLTMETKSQ--------------GTIANNIPPNQ 104
A +FE+KI++ A +Q+DYLRKIS+KMLTMETKSQ GT ++IP NQ
Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQ 119
>ref|XP_483828.1| putative CTV.22 [Oryza sativa (japonica cultivar-group)]
gi|45735914|dbj|BAD12946.1| putative CTV.22 [Oryza
sativa (japonica cultivar-group)]
gi|42409072|dbj|BAD10323.1| putative CTV.22 [Oryza
sativa (japonica cultivar-group)]
Length = 1320
Score = 135 bits (339), Expect = 3e-31
Identities = 74/124 (59%), Positives = 86/124 (68%), Gaps = 14/124 (11%)
Query: 5 NWRPNQGAEPN-------------MDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQE 51
NWRP QGA+P + DWR QLQ E+R RIVNKIMDTLK+HLPVS E
Sbjct: 8 NWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPE 67
Query: 52 GLHELRKIAQKFEDKIYTAATSQSDYLRKISLKMLTMETKSQGTIAN-NIPPNQVGPSNQ 110
GL+EL+KIA +FE+KIYTAATSQSDYLRKISLKML+METK+Q N + NQ P +
Sbjct: 68 GLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQNQNPPGSV 127
Query: 111 PPYP 114
P P
Sbjct: 128 PGLP 131
>gb|AAN62347.1| CTV.20 [Poncirus trifoliata]
Length = 3148
Score = 129 bits (323), Expect = 2e-29
Identities = 64/101 (63%), Positives = 79/101 (77%), Gaps = 10/101 (9%)
Query: 16 MDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAATSQS 75
+D SDWR L +SRQRIVNKIMDTLKRHLP SG EGL+EL++IA +FE+KI+T+ATSQS
Sbjct: 12 LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQS 71
Query: 76 DYLRKISLKMLTMETKSQGTIANNIPPNQVGPSNQPPYPGL 116
DYLRKISLKML+ME++SQ SN+PP+PG+
Sbjct: 72 DYLRKISLKMLSMESRSQNASG----------SNEPPHPGI 102
>pir||B86292 F7H2.12 protein - Arabidopsis thaliana gi|8927657|gb|AAF82148.1|
EST gb|N38213 comes from this gene. [Arabidopsis
thaliana]
Length = 1366
Score = 120 bits (301), Expect = 8e-27
Identities = 70/150 (46%), Positives = 87/150 (57%), Gaps = 46/150 (30%)
Query: 1 MVTNNWRPN-QGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKI 59
M NNWRP+ EP MDT DWR QL P+SRQ+IVNKIM+TLK+HLP SG EG++ELR+I
Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60
Query: 60 AQKFEDKIYTAATSQ-------------------------------SDYLRKISLKMLTM 88
A +FE+KI++ A +Q +DYLRKIS+KMLTM
Sbjct: 61 AARFEEKIFSGALNQRFVRQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTM 120
Query: 89 ETKSQ--------------GTIANNIPPNQ 104
ETKSQ GT ++IP NQ
Sbjct: 121 ETKSQNAAGSSAAIPAANNGTSIDSIPTNQ 150
>gb|AAG48787.1| unknown protein [Arabidopsis thaliana] gi|22329593|ref|NP_173031.2|
expressed protein [Arabidopsis thaliana]
gi|42571493|ref|NP_973837.1| expressed protein
[Arabidopsis thaliana] gi|25513497|pir||C86292 F7H2.13
protein - Arabidopsis thaliana gi|8927658|gb|AAF82149.1|
ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this
gene. [Arabidopsis thaliana]
Length = 179
Score = 90.5 bits (223), Expect = 8e-18
Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 8/102 (7%)
Query: 18 TSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAATSQSDY 77
T DWR Q SR RIVNKIM+T + LP EG +ELRKIA +FE+K++ A++Q++Y
Sbjct: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
Query: 78 LRKISLKMLTMETKSQGTIANN--------IPPNQVGPSNQP 111
LR+I +KML METKSQ ++ + P P+N+P
Sbjct: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEP 105
Score = 81.6 bits (200), Expect = 4e-15
Identities = 39/76 (51%), Positives = 55/76 (72%)
Query: 13 EPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAAT 72
EP ++T DWR Q +SRQ+ +N ++DTLK+ +P SG+EG+ EL +IA E+ I+ +A
Sbjct: 104 EPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAI 163
Query: 73 SQSDYLRKISLKMLTM 88
+Q DYL KISLKM TM
Sbjct: 164 NQEDYLGKISLKMRTM 179
>emb|CAA21993.1| possible regulatory protein [Candida albicans]
gi|7493813|pir||T18235 transcription activator GAL11
homolog - yeast (Candida albicans)
Length = 1145
Score = 52.8 bits (125), Expect = 2e-06
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 11 GAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTA 70
G+ PN + WR E RQ++V I++TL + + L K+AQ FE +Y
Sbjct: 16 GSNPN---ASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYER 72
Query: 71 ATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQVGPSNQ 110
+ S+ DYLR I +K+ + + Q AN Q+ P +
Sbjct: 73 SASKEDYLRAIKMKVHQLRVQKQQIAANQ--GGQINPQQR 110
>gb|EAK98679.1| hypothetical protein CaO19.5105 [Candida albicans SC5314]
gi|46439283|gb|EAK98603.1| hypothetical protein
CaO19.12571 [Candida albicans SC5314]
Length = 1146
Score = 52.8 bits (125), Expect = 2e-06
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 11 GAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTA 70
G+ PN + WR E RQ++V I++TL + + L K+AQ FE +Y
Sbjct: 16 GSNPN---ASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYER 72
Query: 71 ATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQVGPSNQ 110
+ S+ DYLR I +K+ + + Q AN Q+ P +
Sbjct: 73 SASKEDYLRAIKMKVHQLRVQKQQIAANQ--GGQINPQQR 110
>gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana]
gi|25411357|pir||E84491 hypothetical protein At2g10440
[imported] - Arabidopsis thaliana
gi|15226772|ref|NP_178842.1| hypothetical protein
[Arabidopsis thaliana]
Length = 935
Score = 48.5 bits (114), Expect = 4e-05
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 5 NWRPNQGAEPNMDTS----DWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIA 60
NW+PN+ N D + DWR Q +PE RQ++++KI++ K + +++ IA
Sbjct: 6 NWKPNEQGG-NRDAANNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEE---YKINDIA 61
Query: 61 QKFEDKIYTAATSQS 75
KFE+ Y+ AT ++
Sbjct: 62 SKFEENFYSIATDKT 76
>ref|XP_482089.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|27260984|dbj|BAC45101.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 414
Score = 48.1 bits (113), Expect = 5e-05
Identities = 24/64 (37%), Positives = 38/64 (58%)
Query: 20 DWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAATSQSDYLR 79
DWR +L + R R+ I+ +L+ L + L +L+K+A + E++IY A DYLR
Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71
Query: 80 KISL 83
+ISL
Sbjct: 72 RISL 75
>ref|XP_566402.1| ENSANGP00000025904 [Anopheles gambiae str. PEST]
gi|55243802|gb|EAL41310.1| ENSANGP00000025904 [Anopheles
gambiae str. PEST]
Length = 1500
Score = 42.7 bits (99), Expect = 0.002
Identities = 25/110 (22%), Positives = 52/110 (46%), Gaps = 2/110 (1%)
Query: 3 TNNWRPNQGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQ--EGLHELRKIA 60
T+++ GA P T DW + P+ R +V+K++ + S + ++ L A
Sbjct: 219 TSSFAAGSGAVPVQGTKDWHHSVTPDLRNHLVHKLVQAIFPSPDPSAMFDKRMYNLVAYA 278
Query: 61 QKFEDKIYTAATSQSDYLRKISLKMLTMETKSQGTIANNIPPNQVGPSNQ 110
+K E +Y A S+S+Y ++ K+ ++ + Q+GP+++
Sbjct: 279 KKVEGDMYEMANSRSEYYHLLAEKIYKIQKELDAARRRRRLGGQLGPNSR 328
>ref|XP_483400.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|42407735|dbj|BAD08882.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|42407338|dbj|BAD08777.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 104
Score = 42.0 bits (97), Expect = 0.003
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 13/46 (28%)
Query: 5 NWRPNQGAEP----NMDTS---------DWRGQLQPESRQRIVNKI 37
NWRP QGA+P +D S DWR QLQ E R RIVNK+
Sbjct: 42 NWRPTQGADPAAAGGIDLSAPAPAPAGGDWRSQLQSEGRTRIVNKM 87
>gb|AAS51511.1| ACR285Cp [Ashbya gossypii ATCC 10895]
gi|45185971|ref|NP_983687.1| ACR285Cp [Eremothecium
gossypii]
Length = 1323
Score = 41.6 bits (96), Expect = 0.004
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 20 DWRGQLQPESRQRIVNKIMDTLKRHLPVSGQE----GLHELRKIAQKFEDKIYTAATSQS 75
DWR L + R + + ++ L ++G L +L+K A++FE +Y +++S+
Sbjct: 4 DWRSTLSNQERSKYITELAQILADISQINGGARANFDLEKLKKTAEQFETSLYASSSSKE 63
Query: 76 DYLRKISLKMLTMETKSQGTIAN 98
YL + ++ M+ + T+AN
Sbjct: 64 LYLDAMRKRIAAMDAAKKKTLAN 86
>emb|CAG98131.1| GALY_KLULA [Kluyveromyces lactis NRRL Y-1140]
gi|50310801|ref|XP_455423.1| GALY_KLULA [Kluyveromyces
lactis] gi|51704270|sp|P32257|GAL11_KLULA Transcription
regulatory protein GAL11
Length = 1034
Score = 39.3 bits (90), Expect = 0.022
Identities = 20/81 (24%), Positives = 41/81 (49%), Gaps = 4/81 (4%)
Query: 20 DWRGQLQPESRQRIVNKIMDTLKRHLPVSGQE----GLHELRKIAQKFEDKIYTAATSQS 75
DWR + + R + V ++ L ++G E L +L+K A++FE +Y + S+
Sbjct: 3 DWRSTISTQERSQFVTELAQILADMSRINGGEKANFNLEKLKKSAEQFESSLYASCNSKD 62
Query: 76 DYLRKISLKMLTMETKSQGTI 96
YL + ++ M++ + +I
Sbjct: 63 LYLDAMRKRIAAMDSAKRKSI 83
>gb|EAA62366.1| hypothetical protein AN5185.2 [Aspergillus nidulans FGSC A4]
gi|67538030|ref|XP_662789.1| hypothetical protein
AN5185_2 [Aspergillus nidulans FGSC A4]
gi|49095722|ref|XP_409322.1| hypothetical protein
AN5185.2 [Aspergillus nidulans FGSC A4]
Length = 617
Score = 37.4 bits (85), Expect = 0.084
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 10 QGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYT 69
QG E N DWRG + PE ++ +I KRH +E +R A+K ED+
Sbjct: 420 QGCEVNFLECDWRGVVLPEVLEQFSTEISKRRKRHKDKELREEKSRIR--AEKEEDEKRW 477
Query: 70 AATSQSDYLRKISLKMLTMETKSQG--TIANNIPPNQVGPSNQPPYPGLHLRALA 122
AA Q R+ S+ +A++ + S PP P H ALA
Sbjct: 478 AAARQ----RRPSVGTSNRPFSDHDFLPLASDSANIDLASSASPPRPSSHFSALA 528
>emb|CAG88858.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50423915|ref|XP_460542.1| unnamed protein product
[Debaryomyces hansenii]
Length = 1079
Score = 37.0 bits (84), Expect = 0.11
Identities = 25/93 (26%), Positives = 43/93 (45%), Gaps = 6/93 (6%)
Query: 17 DTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAATSQSD 76
+T+ W RQ++V + TLK +G + +AQ+FE + + S+ +
Sbjct: 10 NTNSWHAMYSVSDRQKVVQILSGTLKELQ--NGNYDAQKAANMAQEFEKFTFMKSQSRDE 67
Query: 77 YLRKISLKMLTMETKSQGTIANNIPPNQVGPSN 109
YLR I K+ T+ + I N N +G +N
Sbjct: 68 YLRLIKQKV----TQLRAGIRNPANGNNMGGNN 96
>ref|NP_217566.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY
ASNC-FAMILY) [Mycobacterium tuberculosis H37Rv]
gi|31794228|ref|NP_856721.1| PROBABLE TRANSCRIPTIONAL
REGULATORY PROTEIN (PROBABLY ASNC-FAMILY)
[Mycobacterium bovis AF2122/97]
gi|2791648|emb|CAA16135.1| PROBABLE TRANSCRIPTIONAL
REGULATORY PROTEIN (PROBABLY ASNC-FAMILY)
[Mycobacterium tuberculosis H37Rv]
gi|31619823|emb|CAD96763.1| PROBABLE TRANSCRIPTIONAL
REGULATORY PROTEIN (PROBABLY ASNC-FAMILY)
[Mycobacterium bovis AF2122/97]
gi|13882931|gb|AAK47467.1| transcriptional regulator,
TetR family [Mycobacterium tuberculosis CDC1551]
gi|15842616|ref|NP_337653.1| transcriptional regulator,
TetR family [Mycobacterium tuberculosis CDC1551]
gi|7477469|pir||E70861 hypothetical protein Rv3050c -
Mycobacterium tuberculosis (strain H37RV)
Length = 246
Score = 35.8 bits (81), Expect = 0.24
Identities = 24/83 (28%), Positives = 43/83 (50%), Gaps = 2/83 (2%)
Query: 7 RPNQGAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQE-GLHELRKIAQKFED 65
RP+ A+P + D R + E R+++ N+I+D R + G E + ++ + A +
Sbjct: 6 RPHPSAKPGVKV-DARSERWREHRKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAKP 64
Query: 66 KIYTAATSQSDYLRKISLKMLTM 88
KIY T +SD L I +++ M
Sbjct: 65 KIYRHFTDKSDLLEAIGMRLRDM 87
>ref|XP_481165.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37806357|dbj|BAC99869.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|37805887|dbj|BAC99615.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 490
Score = 35.4 bits (80), Expect = 0.32
Identities = 17/54 (31%), Positives = 31/54 (56%)
Query: 38 MDTLKRHLPVSGQEGLHELRKIAQKFEDKIYTAATSQSDYLRKISLKMLTMETK 91
M+ L P+ + ++ A EDK Y ATS++DY+ +I+L+M+ ++K
Sbjct: 1 MEKLLEEFPIDFPGRMKMIQDNATNEEDKTYMVATSKADYVLRIALQMVNSKSK 54
>gb|EAL31449.1| GA13644-PA [Drosophila pseudoobscura]
Length = 2966
Score = 35.4 bits (80), Expect = 0.32
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 11 GAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSG-----QEGLHELRKIAQKFED 65
G+ N DWR + + R +V+K++ + P S + +H L A+K E
Sbjct: 763 GSTGNDSEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEK 819
Query: 66 KIYTAATSQSDYLRKISLKMLTME 89
+Y A S+S+Y ++ K+ ++
Sbjct: 820 DMYEMAKSRSEYYHLLAEKIYKIQ 843
>gb|AAH46689.1| A730034c02-prov protein [Xenopus laevis]
Length = 429
Score = 35.0 bits (79), Expect = 0.42
Identities = 27/113 (23%), Positives = 45/113 (38%), Gaps = 7/113 (6%)
Query: 8 PNQGAEPNMDTSDWRGQLQPES------RQRIVNKIMDTLKRHLPVSGQEGLHELRKIAQ 61
P A M T + G+ Q S R RIV+ + + ++ + +H +RK+
Sbjct: 100 PPSPASEQMGTVEEGGESQQASSAHRHPRDRIVDGVSKSPEKRSSLPRPSSIHPIRKVYT 159
Query: 62 KFEDKIYTAATSQSDYLRKISLKMLTMETKSQGTIANNIP-PNQVGPSNQPPY 113
ED ++ +TS S +R+ + T GT P + P P Y
Sbjct: 160 DKEDNSFSTSTSVSSSVRRTTRSEPWSRTGKSGTSTPTTPGSTAITPGTPPSY 212
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.130 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 218,025,522
Number of Sequences: 2540612
Number of extensions: 7634810
Number of successful extensions: 19455
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 19428
Number of HSP's gapped (non-prelim): 65
length of query: 123
length of database: 863,360,394
effective HSP length: 99
effective length of query: 24
effective length of database: 611,839,806
effective search space: 14684155344
effective search space used: 14684155344
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC137829.8