BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137826.3 - phase: 0 /pseudo
(1546 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] 99 9e-19
ref|XP_472526.1| OSJNBa0074B10.6 [Oryza sativa (japonica cultiva... 94 3e-17
gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-... 93 6e-17
gb|AAO45752.1| pol protein [Cucumis melo] 92 1e-16
gb|AAX96626.1| retrotransposon protein, putative, Ty3-gypsy sub-... 92 2e-16
gb|AAT38742.1| hypothetical protein PGEC093P17.31 [Solanum demis... 92 2e-16
gb|AAP52945.1| putative retroelement [Oryza sativa (japonica cul... 91 3e-16
emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa (japonica cultivar... 91 3e-16
gb|AAT38744.1| putative gag-pol polyprotein [Solanum demissum] 91 3e-16
gb|AAD22153.1| polyprotein [Sorghum bicolor] 91 3e-16
ref|XP_474986.1| OSJNBa0065B15.6 [Oryza sativa (japonica cultiva... 91 4e-16
gb|AAX95493.1| Retrotransposon gag protein, putative [Oryza sati... 91 4e-16
emb|CAE04985.3| OSJNBa0057M08.11 [Oryza sativa (japonica cultiva... 90 5e-16
gb|AAP53015.1| putative polyprotein [Oryza sativa (japonica cult... 90 7e-16
gb|AAV32158.1| putative polyprotein [Oryza sativa (japonica cult... 90 7e-16
gb|AAT38724.1| putative retrotransposon protein [Solanum demissum] 89 9e-16
gb|AAP44586.1| putative polyprotein [Oryza sativa (japonica cult... 89 1e-15
emb|CAD40075.1| OSJNBa0085C10.28 [Oryza sativa (japonica cultiva... 89 1e-15
gb|AAU10720.1| hypothetical protein [Oryza sativa (japonica cult... 69 1e-09
emb|CAI44662.1| OSJNBa0061C06.18 [Oryza sativa (japonica cultiva... 64 5e-08
>gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum]
Length = 1622
Score = 99.4 bits (246), Expect = 9e-19
Identities = 78/207 (37%), Positives = 104/207 (49%), Gaps = 14/207 (6%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D +M MC DYRQLN+VT +N+Y LP IDDLF+QL AS +SK+ L +
Sbjct: 858 DGTMRMCIDYRQLNKVTVKNRYPLPRIDDLFDQLQGASV---FSKIDLRFDYH---QLRI 911
Query: 800 KGIQDPLWAL*VSSDIVWVDKCSFGCHEFD*-LCDQMTLGF------ILIVCVDDILLFL 852
+ P A + SFG D MT F +IV +DDIL++
Sbjct: 912 RAADIPKTAFRTRYGHYELLVMSFGLTNAPAAFMDLMTRVFRPYLDSFVIVFIDDILIYS 971
Query: 853 ESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEPVMN 911
S+ D HL +V Q+LYA F F + +G+VV E IMVD IE + +
Sbjct: 972 RSRGDHEQHLRVVLQTLRDQRLYAKFSKCQFWLDSVAFLGHVVSKEGIMVDPAKIEAIRD 1031
Query: 912 WV*PSFVIESRGFMGLASYYRGFEDAF 938
W P+ V E R F+GLA YYR F ++F
Sbjct: 1032 WARPTSVTEIRSFVGLAGYYRRFVESF 1058
Score = 63.9 bits (154), Expect = 4e-08
Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 32/347 (9%)
Query: 146 NRPVMTGNEHKMLTKFLKLMSYMFFGSESEDTFKFILHYYERLNKLVIVKQYGVEIVTLQ 205
+RP M + KML FL+L F G+ ED +F+ +ERL L +V+ G + + Q
Sbjct: 282 DRP-MPLEDQKMLGVFLRLTPPRFSGAVGEDAHEFLTTCHERLRTLGLVESRGADFIAYQ 340
Query: 206 FRGEAKQW*RAYVKCRSSTFPPLSWMQFYALF*KDMCSR-LSEIVRWVISLL*SMVVSL* 264
G A+QW R +++ R PP+SW +F F R + + +R L +S
Sbjct: 341 LDGPARQWWRTFIQTRPVGSPPVSWDEFSEAFLAKFIPRSVRDRLRDQFCRLEQGSMS-- 398
Query: 265 LIMRLSSMICLDMIHNWCLL--KSTGFAYLLRELNFEL*VFRVHMTCARKSSNKAIDFVK 322
+ + H +L + +R L +L + + A +S +D
Sbjct: 399 -VAEYETRFHELSRHAEMILPTEEERVRCFVRGLRLQLRLETQSLVSAGRSFLDVVDHAS 457
Query: 323 KVEGVKRDRDAKAFSKKDKSKGNF*VSYSRGKG---------RMTLVDQPIQSTMPSS-- 371
+E ++R+ + K+ + +G++ S R + R +P Q+++ +S
Sbjct: 458 TMEHLRREAQGGS-EKRARHEGSYSDSRPRSRDYHDRVGRRFRQGQSSRPTQASLQASDG 516
Query: 372 ----TSNYRGTPHHNFIQYS*GVVSSASVRPSFYRTFYNCGDFRHISRYCPKPRILDLMQ 427
S+ +G G SS S RP + Y CG+ H +R CP+ +
Sbjct: 517 GRGEASSSQGREVFQSGSSGHGSRSSGS-RPR--QGCYECGEMGHWARDCPQHSRIAPAP 573
Query: 428 K*TRAVVPA------SNDKNSRGHPRGW*GGNHRGCEGRENGNVGRG 468
+PA ++ RG +G GG G G + GRG
Sbjct: 574 HAAPLALPAPPVRGRGQGQDRRGGQQGIRGGPRGGRSGGRSDGQGRG 620
Score = 48.5 bits (114), Expect = 0.002
Identities = 35/118 (29%), Positives = 56/118 (46%), Gaps = 10/118 (8%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLW-----ENA* 1318
RLTK++HF+ V+ ++A++L+++Y+R P+ + W E
Sbjct: 1422 RLTKSAHFLPVQCSFSAERLARIYIREVVRLHGVPVSIISDRGSQFTSNFWRTFQDELGT 1481
Query: 1319 EVGHVTHF*NNLPSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNY 1376
V T F + TI+ +R C +DF G WD+FL L EF+YNN+Y
Sbjct: 1482 RVDLSTAFHPQTDGQSERTIQVLEDMLRA-----CVMDFGGQWDQFLPLAEFAYNNSY 1534
>ref|XP_472526.1| OSJNBa0074B10.6 [Oryza sativa (japonica cultivar-group)]
gi|38346256|emb|CAE02078.2| OSJNBa0074B10.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1447
Score = 94.4 bits (233), Expect = 3e-17
Identities = 81/247 (32%), Positives = 124/247 (49%), Gaps = 24/247 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN VT +NKY LP IDDLF+QL A+ +SK+ L G +
Sbjct: 587 DHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATV---FSKIDLRS------GYHQ 637
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + ++ ++V +DDIL
Sbjct: 638 LRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDIL 697
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ ++K + +HL + + +LYA F F ++ +G+V+ + + VD N+E
Sbjct: 698 IYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVES 757
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAFDH----NTYLGTTSVT*SLIINYYASQLIL 964
V++W P V E R F+GLA YYR F + F T L V + AS+L L
Sbjct: 758 VLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKKGFQVYCDASRLGL 817
Query: 965 GVVLMQD 971
G VLMQ+
Sbjct: 818 GCVLMQE 824
Score = 47.4 bits (111), Expect = 0.004
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*-EVGH 1322
RLTK +HFI VK Y +L+++YM R P + W+ E+G
Sbjct: 1113 RLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQVEMGT 1172
Query: 1323 VTHF*NNL-PSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
+F P ++G T R N + + C + F G WDK L EFSYNN+Y S
Sbjct: 1173 RLNFSTAYHPQTDGQTERVNQ--ILEDMLRACVLAFGGSWDKNLPYAEFSYNNSYQAS 1228
>gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 1436
Score = 93.2 bits (230), Expect = 6e-17
Identities = 73/214 (34%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D SM MC DYR LN VT +NKY LP IDDLF+QL A +SK+ L G +
Sbjct: 589 DGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKV---FSKIDLRS------GYHQ 639
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I+ P A + SFG F L +++ + ++ ++V +DDIL
Sbjct: 640 LKIRTGDVPKTAFSTRYGLYEFTVMSFGLTNTPAYFMNLMNKVFMDYLDKFVVVFIDDIL 699
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ + + + V+HL +V + + KLYA F F ++ +G+V+ ++VD +E
Sbjct: 700 IYSKDEEEHVEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVISAGGVVVDPAKVEA 759
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAFDHNT 942
V W P V E R F+GLA YYR F + F T
Sbjct: 760 VTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIT 793
>gb|AAO45752.1| pol protein [Cucumis melo]
Length = 923
Score = 92.0 bits (227), Expect = 1e-16
Identities = 76/210 (36%), Positives = 107/210 (50%), Gaps = 20/210 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D SM +C DYR+LN+VT +N+Y LP IDDLF+QL A+ +SK+ L G +
Sbjct: 40 DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATV---FSKIDLRS------GYHQ 90
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I+D P A SFG F L +++ F+ +IV +DDIL
Sbjct: 91 LRIKDEDVPKTAFRSRYGHYQFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDIL 150
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ +++ + +HL +V KLYA F F Q+ +G+VV + VD IE
Sbjct: 151 IYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA 210
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
V W PS V E R F+GLA YYR F + F
Sbjct: 211 VTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240
Score = 41.6 bits (96), Expect = 0.21
Identities = 34/115 (29%), Positives = 52/115 (44%), Gaps = 4/115 (3%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*E-VGH 1322
RLTK++HF+ K Y A + +++YM P+ + W+ +G
Sbjct: 599 RLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGT 658
Query: 1323 VTHF*NNL-PSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNY 1376
F P ++G T R N V + C ++F G WD L L EF+YNN+Y
Sbjct: 659 RLDFSTAFHPQTDGQTERLNQ--VLEDMLRACALEFPGSWDSHLHLMEFAYNNSY 711
>gb|AAX96626.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 1045
Score = 91.7 bits (226), Expect = 2e-16
Identities = 71/213 (33%), Positives = 110/213 (51%), Gaps = 26/213 (12%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN VT +NKY LP IDDLF+QL A+ +SK+ L G +
Sbjct: 476 DHTQRMCVDYRTLNEVTIKNKYPLPRIDDLFDQLEGATI---FSKIDLRS------GYHQ 526
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + ++ ++V +DDIL
Sbjct: 527 LRIREEDIPKTAFTTQYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLNKFVVVFIDDIL 586
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP----IGNVVMNERIMVDLQN 905
++ ++K + +HL + + +LYA +S C LP +G+V+ + +D N
Sbjct: 587 IYSKTKEEHEEHLRLALEKLREHQLYA---KLSKCEFWLPEVKFLGHVISVGGVAMDPSN 643
Query: 906 IEPVMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
+E V+NW P V+E R F+GLA YYR F + F
Sbjct: 644 VESVLNWKQPKMVLEIRSFLGLAGYYRRFIENF 676
>gb|AAT38742.1| hypothetical protein PGEC093P17.31 [Solanum demissum]
Length = 838
Score = 91.7 bits (226), Expect = 2e-16
Identities = 69/181 (38%), Positives = 81/181 (44%), Gaps = 59/181 (32%)
Query: 389 GVVSSASVRPSFYRTFYNCGDFRHISRYCPKPRILDLMQK*TRAVVPASNDKNSRGHPRG 448
G S RPSF RT YNC + RHI R CP R++D Q+ TRAVV A N N RG P+G
Sbjct: 223 GATPSTGNRPSFDRTCYNCREPRHIRRDCPHLRMMDFAQQQTRAVVLAGNCNNGRGRPQG 282
Query: 449 W*GGNHRGCEGRENGNVGRGALQPRKKVVCQDGRA*FYARLIWRDLMKESQVLFFSLPDG 508
GGN RG GR NGN G KV+ Y L+ RD M + VLF+
Sbjct: 283 VRGGNQRGRGGRGNGNAG--------KVIT-------YTILV-RDRM--ANVLFYP---- 320
Query: 509 **IFF*SYIFS*VTV*FALGFDEVCNIFYTPIHVSTLVGGSVIVTHVYQLYLVIFMGFQS 568
VG SVIVTHVY ++FMGFQ+
Sbjct: 321 -------------------------------------VGESVIVTHVYCACPILFMGFQT 343
Query: 569 W 569
W
Sbjct: 344 W 344
Score = 60.8 bits (146), Expect = 3e-07
Identities = 57/212 (26%), Positives = 90/212 (41%), Gaps = 68/212 (32%)
Query: 1 MVHTRINDIKLVAHINELVESSTIRGRSLFKGRERGRVEQARGGAPFEKSPREKAPYAPH 60
MV+TR N ++ VA +N E S + AP E +PR +AP A H
Sbjct: 1 MVNTRFNGVRPVAPVNTPAEESVAK-------------------APIENAPRNEAPSAHH 41
Query: 61 VDV*EIVEV*NEEEVELEEDAHVETICIPPLNLVLSQQIMFF*RDWTVLESFPQCKQLKL 120
++ E+ VE+EE+ E+ Q +++
Sbjct: 42 EEI--------EDNVEVEEE-----------------------------ENVGQEEEVHA 64
Query: 121 KSIILLL*RFLRLVE**ELMYFSSPNRPVMTGNEHKMLTKFLKLMSYMFFGSESEDTFKF 180
++I+LL + +P P + K+ + + + ++ ED ++F
Sbjct: 65 ETILLL-----------SVQATQAPANPPIAITVPKV-DETIGIDAFFRPYWVLEDAYEF 112
Query: 181 ILHYYERLNKLVIVKQYGVEIVTLQFRGEAKQ 212
ILH YERL+KL IV Q+GVE V Q +GEAKQ
Sbjct: 113 ILHCYERLHKLRIVHQHGVEFVAFQLQGEAKQ 144
Score = 42.7 bits (99), Expect = 0.096
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMR 1289
RLTK++HFILVK YNAQQL+KVY++
Sbjct: 645 RLTKSTHFILVKIDYNAQQLAKVYVK 670
>gb|AAP52945.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37532712|ref|NP_920658.1| putative retroelement [Oryza
sativa (japonica cultivar-group)]
gi|19881702|gb|AAM01103.1| Putative retroelement [Oryza
sativa] gi|15217244|gb|AAK92588.1| Putative retroelement
[Oryza sativa]
Length = 1777
Score = 90.9 bits (224), Expect = 3e-16
Identities = 71/210 (33%), Positives = 106/210 (49%), Gaps = 20/210 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN VT +NKY LP IDDLF+QL A +SK+ L G +
Sbjct: 887 DKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAKV---FSKIDLRS------GYHQ 937
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + F+ ++V +DDIL
Sbjct: 938 LRIREEDIPKTAFTTRYGLYECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDIL 997
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ +SK + HL +V + +LYA F F ++ +G+V+ + + VD N+E
Sbjct: 998 IYSKSKEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVES 1057
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
V W P V + R F+GLA YYR F + F
Sbjct: 1058 VTKWTPPKTVSQIRSFLGLAGYYRRFIENF 1087
Score = 47.8 bits (112), Expect = 0.003
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*E-VGH 1322
RLTK +HFI V Y ++L+++Y+ R P + W+ E +G
Sbjct: 1443 RLTKVAHFIPVHTTYTGKRLAELYLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQEEMGT 1502
Query: 1323 VTHF*NNL-PSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
+F P ++G T R N + + C +DF G WDK L EFSYNN+Y S
Sbjct: 1503 RLNFSTAYHPQTDGQTERVNQ--ILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQAS 1558
>emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa (japonica cultivar-group)]
gi|50922727|ref|XP_471724.1| OSJNBa0023J03.1 [Oryza
sativa (japonica cultivar-group)]
Length = 1827
Score = 90.9 bits (224), Expect = 3e-16
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 20/210 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN VT +NKY LP IDDLF+QL A +SK+ L G +
Sbjct: 937 DKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAKV---FSKIDLRS------GYHQ 987
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + F+ ++V +DDIL
Sbjct: 988 LRIREEDIPKTAFTTRYGLYECTVMSFGLTNAPAFFMNLMNKVFIEFLDKFVVVFIDDIL 1047
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ +S+ + HL +V + +LYA F F ++ +G+V+ + + VD N+E
Sbjct: 1048 IYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVES 1107
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
V W P V + R F+GLASYYR F + F
Sbjct: 1108 VTKWTPPKTVSQIRSFLGLASYYRRFIENF 1137
Score = 47.8 bits (112), Expect = 0.003
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*E-VGH 1322
RLTK +HFI V Y ++L+++Y+ R P + W+ E +G
Sbjct: 1493 RLTKVAHFIPVHTTYTGKRLAELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEEMGT 1552
Query: 1323 VTHF*NNL-PSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
+F P ++G T R N + + C +DF G WDK L EFSYNN+Y S
Sbjct: 1553 RLNFSTAYHPQTDGQTERVNQ--ILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQAS 1608
>gb|AAT38744.1| putative gag-pol polyprotein [Solanum demissum]
Length = 1515
Score = 90.9 bits (224), Expect = 3e-16
Identities = 72/220 (32%), Positives = 106/220 (47%), Gaps = 40/220 (18%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D S+ MC DYRQLN+VT +NKY LP IDDLF+QL A+ +SK+ L G +
Sbjct: 705 DGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATC---FSKIDLRS------GYHQ 755
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHEFD*LCDQMT-----------------LGF 839
+++ P A + +G +EF + +T L
Sbjct: 756 LRVRERDIPKTAF----------RTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPYLDM 805
Query: 840 ILIVCVDDILLFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNER 898
+I+ +DDIL++ ++ D HL V ++LYA F F + +G++V +
Sbjct: 806 FVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDG 865
Query: 899 IMVDLQNIEPVMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
I VD + IE V NW P+ E R F+GLA YYR F + F
Sbjct: 866 IKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGF 905
Score = 42.4 bits (98), Expect = 0.13
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWEN-----A* 1318
R+TK++HF+ V+ ++A+ +K+Y++ PI + W++
Sbjct: 1267 RMTKSAHFLPVRTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGS 1326
Query: 1319 EVGHVTHF*NNLPSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNY 1376
+V T F TI+ +R C IDF+ +WD L L EF+YNN+Y
Sbjct: 1327 KVSLSTAFHPQTDGQAERTIQTLEDMLRA-----CVIDFKSNWDDHLPLIEFAYNNSY 1379
>gb|AAD22153.1| polyprotein [Sorghum bicolor]
Length = 1484
Score = 90.9 bits (224), Expect = 3e-16
Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 20/210 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D S MC DYR LN VT +NKY LP IDDLF+QL A +SK+ L G +
Sbjct: 607 DGSQRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLRGACV---FSKIDLRS------GYHQ 657
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F + +++ + ++ ++V +DDIL
Sbjct: 658 LKIRNSDIPKTAFTTRYGLYEYTVMSFGLTNAPAYFMYMMNKVFMEYLDKFVVVFIDDIL 717
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
+F ++K + +HL +V KLYA F ++ +G+VV N I VD ++
Sbjct: 718 VFSKTKEEHAEHLRLVLQKLREHKLYAKRSKCEFWLEEVSFLGHVVSNGGIAVDPSKVKD 777
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
V+NW P+ V E R F+GLA YYR F + F
Sbjct: 778 VLNWKPPTDVSEIRSFLGLAGYYRRFIEGF 807
>ref|XP_474986.1| OSJNBa0065B15.6 [Oryza sativa (japonica cultivar-group)]
gi|38344560|emb|CAD39902.2| OSJNBa0065B15.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1467
Score = 90.5 bits (223), Expect = 4e-16
Identities = 71/210 (33%), Positives = 106/210 (49%), Gaps = 20/210 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN VT +NKY LP IDDLF+QL A+ +SK+ L G +
Sbjct: 745 DHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATV---FSKIDLRS------GYHQ 795
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + ++ ++V +DDIL
Sbjct: 796 LRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDIL 855
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ +K +HLC+ + +LYA F F ++ +G+V+ + VD N+E
Sbjct: 856 IYSRTKEVHEEHLCLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVES 915
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
V NW P V E R F+GLA YYR F + F
Sbjct: 916 VTNWKQPKTVSEIRNFLGLAGYYRRFIENF 945
Score = 45.1 bits (105), Expect = 0.019
Identities = 34/116 (29%), Positives = 46/116 (39%), Gaps = 43/116 (37%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*EVGHV 1323
RLTK +HFI VK Y+ +L+++YM R
Sbjct: 1253 RLTKVAHFIPVKTTYSGSRLAELYMAR--------------------------------- 1279
Query: 1324 THF*NNLPSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
++G T R N + + C +DF G WDK L EFSYNN+Y S
Sbjct: 1280 --------ITDGQTERVNQ--ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQAS 1325
>gb|AAX95493.1| Retrotransposon gag protein, putative [Oryza sativa (japonica
cultivar-group)] gi|62734610|gb|AAX96719.1|
retrotransposon protein, putative, Ty3-gypsy sub-class
[Oryza sativa (japonica cultivar-group)]
Length = 1497
Score = 90.5 bits (223), Expect = 4e-16
Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 738 E*DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GC 797
E D + MC DYR LN VT +NKY LP IDDLF+QL A+ +SK+ N G
Sbjct: 793 EKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKAATI---FSKI------NLRSGY 843
Query: 798 TKKGIQD---PLWAL*VSSDIVWVDKCSFGCHEFD*LCDQMTLGFILIVCVDDILLFLES 854
+ I++ P A + SFG L + TL ++V +DDIL++ +S
Sbjct: 844 HQLRIREEDIPKTAFTTRYGLYEFTVMSFG------LTNAPTLDKFVVVFIDDILVYSQS 897
Query: 855 K*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEPVMNWV 913
+ D HL +V +LYA F F ++ +G+V+ + + VD + + V +W
Sbjct: 898 EEDHQQHLRLVLGKLREHQLYAKFSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWK 957
Query: 914 *PSFVIESRGFMGLASYYRGFEDAF 938
P V + R F+GLA YYR F + F
Sbjct: 958 QPKTVTQVRSFLGLAGYYRRFIENF 982
Score = 45.1 bits (105), Expect = 0.019
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*E-VGH 1322
RLTK + FI VK Y +L+++Y R P + W+ E +G
Sbjct: 1163 RLTKVARFIPVKTTYGGNKLAELYFARIVSLHGIPKKIVSDRGSQFTSHFWKKLQEELGT 1222
Query: 1323 VTHF*NNL-PSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
+F P ++G T R N + + C +DFR WDK L EFSYNN+Y S
Sbjct: 1223 RLNFSTAYHPQTDGQTERLNQ--ILEDMLRACVLDFRKTWDKSLPYAEFSYNNSYQAS 1278
>emb|CAE04985.3| OSJNBa0057M08.11 [Oryza sativa (japonica cultivar-group)]
Length = 1664
Score = 90.1 bits (222), Expect = 5e-16
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 20/210 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN VT +NKY LP IDDLF+QL A+ +SK+ L G +
Sbjct: 1061 DHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATV---FSKIDLRS------GYHQ 1111
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + ++ ++V +DDIL
Sbjct: 1112 LRIKEEDIPKTAFTTRYRLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDIL 1171
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ +K + +HLC+ + +LYA F F ++ +G+V+ + VD N+E
Sbjct: 1172 IYSRTKEEHEEHLCLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVES 1231
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
V NW P V E F+GLA YYR F + F
Sbjct: 1232 VTNWKQPKTVSEIHSFLGLAGYYRRFIENF 1261
Score = 38.9 bits (89), Expect = 1.4
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 1353 CDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
C +DF G WDK L EFSYNN+Y S
Sbjct: 1573 CALDFGGSWDKNLPYAEFSYNNSYQAS 1599
>gb|AAP53015.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37532852|ref|NP_920728.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|22655733|gb|AAN04150.1| Putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|16905211|gb|AAL31081.1| putative polyprotein [Oryza
sativa]
Length = 1416
Score = 89.7 bits (221), Expect = 7e-16
Identities = 81/253 (32%), Positives = 123/253 (48%), Gaps = 30/253 (11%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN VT +NKY LP IDDLF+QL A+ +SK+ L G +
Sbjct: 550 DHTQRMCVDYRALNDVTIKNKYLLPRIDDLFDQLKGATV---FSKIDLRS------GYHQ 600
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + ++ ++V +DDIL
Sbjct: 601 LRIKEEDIPKTAFTTRYGLFKCTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDIL 660
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ +K + +HL + + +LYA F F ++ +G+V+ + VD N+E
Sbjct: 661 IYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVES 720
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAFDHNTYLGTTSVT*SLII--------NYY-- 958
V NW P V E R F+GLA YY+ E+ L ++ ++I Y
Sbjct: 721 VTNWKQPKTVSEIRSFLGLAGYYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYCD 780
Query: 959 ASQLILGVVLMQD 971
AS+L LG VLMQD
Sbjct: 781 ASKLGLGCVLMQD 793
Score = 51.2 bits (121), Expect = 3e-04
Identities = 40/118 (33%), Positives = 56/118 (46%), Gaps = 4/118 (3%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*E-VGH 1322
RLTK +HFI VK Y+ +L+++YM R P + W+ E +G
Sbjct: 1082 RLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGS 1141
Query: 1323 VTHF*NNL-PSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
+F P ++G T R N + + C +DF G WDK L EFSYNN+Y S
Sbjct: 1142 KLNFSTAYHPQTDGQTERVNQ--ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQAS 1197
>gb|AAV32158.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1131
Score = 89.7 bits (221), Expect = 7e-16
Identities = 71/213 (33%), Positives = 109/213 (50%), Gaps = 26/213 (12%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DY LN VT +NKY LP IDDLF+QL A+ +SK+ L G +
Sbjct: 564 DHTQRMCVDYHALNEVTIKNKYPLPRIDDLFDQLEGATV---FSKIDLRS------GYHQ 614
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + ++ ++V +DDIL
Sbjct: 615 LRIREEDIPKTAFTTRYGLFECTVMSFGLTNSPAFFMNLMNKVFMEYLDKFVVVFIDDIL 674
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP----IGNVVMNERIMVDLQN 905
++ ++K + +HL + + +LYA F S C LP +G+V+ + VD N
Sbjct: 675 IYSKTKEEHEEHLRLALEKLREHQLYAKF---SKCEFWLPEVKFLGHVISAGGVAVDPSN 731
Query: 906 IEPVMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
+E V+NW P ++E R F+GLA YYR F + F
Sbjct: 732 VESVLNWKQPKTILEIRSFLGLAGYYRRFIENF 764
>gb|AAT38724.1| putative retrotransposon protein [Solanum demissum]
Length = 1602
Score = 89.4 bits (220), Expect = 9e-16
Identities = 71/220 (32%), Positives = 106/220 (47%), Gaps = 40/220 (18%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D S+ +C DYRQLN+VT +NKY LP IDDLF+QL A+ +SK+ L G +
Sbjct: 711 DGSLRICIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATC---FSKIDLRS------GYHQ 761
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHEFD*LCDQMT-----------------LGF 839
+++ P A + +G +EF + +T L
Sbjct: 762 LRVRERDIPKTAF----------RTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPYLDM 811
Query: 840 ILIVCVDDILLFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNER 898
+I+ +DDIL++ ++ D HL V ++LYA F F + +G++V +
Sbjct: 812 FVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDG 871
Query: 899 IMVDLQNIEPVMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
I VD + IE V NW P+ E R F+GLA YYR F + F
Sbjct: 872 IKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGF 911
Score = 43.5 bits (101), Expect = 0.057
Identities = 33/118 (27%), Positives = 54/118 (44%), Gaps = 10/118 (8%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWEN-----A* 1318
R+TK++HF+ VK ++A+ +K+Y++ PI + W++
Sbjct: 1273 RMTKSAHFLPVKTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGS 1332
Query: 1319 EVGHVTHF*NNLPSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNY 1376
+V T F TI+ +R C IDF+ +WD L L EF+YNN+Y
Sbjct: 1333 KVSLSTAFHPQTDGQAERTIQTLEDMLRA-----CVIDFKSNWDDHLPLIEFAYNNSY 1385
>gb|AAP44586.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|34896544|ref|NP_909616.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1436
Score = 89.0 bits (219), Expect = 1e-15
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 20/210 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN VT +NKY LP IDDLF+QL A+ +SK+ + G +
Sbjct: 584 DHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATV---FSKI------DPRSGYHQ 634
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + ++ +V +DDIL
Sbjct: 635 LRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFEVVFIDDIL 694
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ +K + +HLC+ + +LYA F F ++ +G+V+ + VD N+E
Sbjct: 695 IYSRTKEEHEEHLCLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVES 754
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
V NW P V E R F+GLA YYR F + F
Sbjct: 755 VTNWKQPKTVSEIRSFLGLAGYYRRFIENF 784
Score = 48.9 bits (115), Expect = 0.001
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*E-VGH 1322
RLTK +HFI VK Y+ +L+++YM R P + W+ E +G
Sbjct: 1102 RLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSKFWKKLQEEMGS 1161
Query: 1323 VTHF*NNL-PSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
+F P ++G T R N + + C +DF G WDK L FSYNN+Y S
Sbjct: 1162 KLNFSTAYHPQTDGQTERVNQ--ILEDMLRACALDFGGSWDKNLPYAGFSYNNSYQAS 1217
>emb|CAD40075.1| OSJNBa0085C10.28 [Oryza sativa (japonica cultivar-group)]
Length = 1466
Score = 89.0 bits (219), Expect = 1e-15
Identities = 69/210 (32%), Positives = 106/210 (49%), Gaps = 20/210 (9%)
Query: 740 DSSMIMCKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTK 799
D + MC DYR LN +T +N Y LP IDDLF+QL A+ +SK+ L G +
Sbjct: 652 DHTQRMCVDYRALNDLTIKNNYPLPRIDDLFDQLKGATV---FSKIDLRS------GYHQ 702
Query: 800 KGIQD---PLWAL*VSSDIVWVDKCSFGCHE----FD*LCDQMTLGFI---LIVCVDDIL 849
I++ P A + SFG F L +++ + ++ ++V +DDIL
Sbjct: 703 LRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDIL 762
Query: 850 LFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEP 908
++ +K + +HL + + +LYA F FC ++ +G+V+ + VD N+E
Sbjct: 763 IYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFCLSEVKFLGHVISAGGVAVDPSNVES 822
Query: 909 VMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
V NW P V E R F+GLA YYR F + F
Sbjct: 823 VTNWKQPKTVSEIRSFLGLAGYYRRFIENF 852
Score = 51.2 bits (121), Expect = 3e-04
Identities = 40/118 (33%), Positives = 56/118 (46%), Gaps = 4/118 (3%)
Query: 1264 RLTKTSHFILVKKHYNAQQLSKVYMRR**GCTECPILSS*TVVPVYIYVLWENA*E-VGH 1322
RLTK +HFI VK Y+ +L+++YM R P + W+ E +G
Sbjct: 1208 RLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGS 1267
Query: 1323 VTHF*NNL-PSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSYNNNYTLS 1379
+F P ++G T R N + + C +DF G WDK L EFSYNN+Y S
Sbjct: 1268 KLNFSTAYHPQTDGQTERVNQ--ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQAS 1323
>gb|AAU10720.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 666
Score = 68.9 bits (167), Expect = 1e-09
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 25/186 (13%)
Query: 746 CKDYRQLNRVTTRNKYTLPLIDDLFNQLWRASFL*DYSKVCLPLVKN*A*GCTKKGIQDP 805
C +Y LN VT +NKY LP IDDLF+QL A +SK+ L GC + I++
Sbjct: 18 CVNYCALNDVTIKNKYPLPRIDDLFDQLKGAIV---FSKIDLRS------GCHQLRIKE- 67
Query: 806 LWAL*VSSDIVWVDKCSFGCHEFD*LCDQMTLGFI---LIVCVDDILLFLESK*DKVDHL 862
DI +F F L +++ L ++ ++V +DDIL++ ++K + +HL
Sbjct: 68 -------EDIPKTAFTAF----FMNLMNKVFLEYLDKFVVVFIDDILIYSQTKEEHEEHL 116
Query: 863 CIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERIMVDLQNIEPVMNWV*PSFVIES 921
+ + +LYA F F ++ +G+++ ++VD N+E V NW P V E
Sbjct: 117 RLALEKLREHQLYAKFSKCEFWLSEVKFLGHIISVGGVVVDPSNVESVTNWKQPKAVSEI 176
Query: 922 RGFMGL 927
R +GL
Sbjct: 177 RSILGL 182
Score = 39.7 bits (91), Expect = 0.82
Identities = 26/67 (38%), Positives = 34/67 (49%), Gaps = 6/67 (8%)
Query: 1313 LWENA*EVGHVTHF*NNLPSSNGWTIRENNPSVRGHIEGMCDIDFRGHWDKFLTLCEFSY 1372
+W + V HF +P+ NG T R N + + C +DF G WDK L EFSY
Sbjct: 334 IWVIIDRLTKVAHF---IPT-NGQTERVNQ--ILEDMLRACALDFGGSWDKNLPNAEFSY 387
Query: 1373 NNNYTLS 1379
NN+Y S
Sbjct: 388 NNSYQAS 394
>emb|CAI44662.1| OSJNBa0061C06.18 [Oryza sativa (japonica cultivar-group)]
Length = 1522
Score = 63.5 bits (153), Expect = 5e-08
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 841 LIVCVDDILLFLESK*DKVDHLCIV*DVHGRQKLYA*FLSVSFC*LQLP-IGNVVMNERI 899
++V +DDIL++ +K + V+HL + + +LYA F F ++ +G+V+ +
Sbjct: 904 VVVFIDDILIYSRTKEEHVEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGV 963
Query: 900 MVDLQNIEPVMNWV*PSFVIESRGFMGLASYYRGFEDAF 938
+D N+E V NW P V E R F+GLA YYR F + F
Sbjct: 964 AIDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENF 1002
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.359 0.161 0.583
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,231,680,259
Number of Sequences: 2540612
Number of extensions: 82754794
Number of successful extensions: 308319
Number of sequences better than 10.0: 781
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 304998
Number of HSP's gapped (non-prelim): 2852
length of query: 1546
length of database: 863,360,394
effective HSP length: 141
effective length of query: 1405
effective length of database: 505,134,102
effective search space: 709713413310
effective search space used: 709713413310
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 82 (36.2 bits)
Medicago: description of AC137826.3