BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137669.5 + phase: 0 
         (58 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO23586.1| At3g50910/F18B3_190 [Arabidopsis thaliana] gi|145...    62  3e-09
ref|XP_467362.1| unknown protein [Oryza sativa (japonica cultiva...    57  1e-07
gb|AAM14287.1| unknown protein [Arabidopsis thaliana] gi|1581031...    55  5e-07
ref|YP_089599.1| NADH dehydrogenase subunit 4 [Rhinatrema bivitt...    31  7.6
ref|XP_545184.1| PREDICTED: similar to a disintegrin-like and me...    31  10.0

>gb|AAO23586.1| At3g50910/F18B3_190 [Arabidopsis thaliana]
           gi|14517540|gb|AAK62660.1| AT3g50910/F18B3_190
           [Arabidopsis thaliana] gi|18409208|ref|NP_566941.1|
           expressed protein [Arabidopsis thaliana]
          Length = 447

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 25/42 (59%), Positives = 34/42 (80%)

Query: 1   MARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLPAGGES 42
           +ARRERQ++ K+Q+WIWGS+   I LG+AA+AWSY+PA   S
Sbjct: 398 VARRERQKRKKRQRWIWGSIAATITLGSAALAWSYIPAAKPS 439


>ref|XP_467362.1| unknown protein [Oryza sativa (japonica cultivar-group)]
           gi|41053140|dbj|BAD08083.1| unknown protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 456

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 23/48 (47%), Positives = 33/48 (67%)

Query: 1   MARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLPAGGESYSAEDH 48
           M+R++R  + K+QKW WGS+   + LGTAA+AWSYLPA     S + +
Sbjct: 405 MSRQQRNIRKKRQKWFWGSVGLAVTLGTAAIAWSYLPAAQPQASQDSN 452


>gb|AAM14287.1| unknown protein [Arabidopsis thaliana] gi|15810313|gb|AAL07044.1|
           unknown protein [Arabidopsis thaliana]
           gi|18425078|ref|NP_569035.1| expressed protein
           [Arabidopsis thaliana]
          Length = 444

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 20/39 (51%), Positives = 30/39 (76%)

Query: 1   MARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLPAG 39
           +ARR+ Q++ ++Q+WIWGS+   I LG+  +AWSYLP G
Sbjct: 390 VARRDGQKRKRRQRWIWGSIAATITLGSGVLAWSYLPPG 428


>ref|YP_089599.1| NADH dehydrogenase subunit 4 [Rhinatrema bivittatum]
          gi|42406130|gb|AAS13727.1| NADH dehydrogenase subunit 4
          [Rhinatrema bivittatum]
          Length = 458

 Score = 31.2 bits (69), Expect = 7.6
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 12 KQKWIWGSLTT-VIALGTAAVAWSYLPA 38
          KQKW+W +LTT  + +  A++ W Y P+
Sbjct: 19 KQKWLWPALTTHSLIIAAASLVWFYSPS 46


>ref|XP_545184.1| PREDICTED: similar to a disintegrin-like and metalloprotease
            (reprolysin type) with thrombospondin type 1 motif, 16
            preproprotein [Canis familiaris]
          Length = 2887

 Score = 30.8 bits (68), Expect = 10.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 5    ERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLPAG 39
            ER  K KK +W+  + + V A G A  AW  +P G
Sbjct: 2364 ERCHKHKKLQWLLSAWSQVCAPGPAGTAWPAVPRG 2398


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.313    0.126    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,827,663
Number of Sequences: 2540612
Number of extensions: 3281655
Number of successful extensions: 7265
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7261
Number of HSP's gapped (non-prelim): 5
length of query: 58
length of database: 863,360,394
effective HSP length: 34
effective length of query: 24
effective length of database: 776,979,586
effective search space: 18647510064
effective search space used: 18647510064
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)