BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137603.5 + phase: 0
(370 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187096.2| Pex2/Pex12 N-terminal domain-containing protein... 543 e-153
gb|AAP54200.1| putative peroxin [Oryza sativa (japonica cultivar... 489 e-137
gb|AAF63777.1| unknown protein [Arabidopsis thaliana] gi|1258531... 483 e-135
dbj|BAC42305.1| unknown protein [Arabidopsis thaliana] 270 7e-71
ref|XP_638103.1| hypothetical protein DDB0186545 [Dictyostelium ... 200 5e-50
ref|XP_523610.1| PREDICTED: peroxisomal biogenesis factor 12 [Pa... 182 1e-44
gb|AAH31085.1| Peroxisomal biogenesis factor 12 [Homo sapiens] g... 179 1e-43
ref|XP_548259.1| PREDICTED: similar to Peroxisome assembly prote... 176 1e-42
ref|NP_598786.1| peroxisomal biogenesis factor 12 [Mus musculus]... 175 2e-42
ref|NP_446373.1| peroxisomal biogenesis factor 12 [Rattus norveg... 172 1e-41
sp|Q9ET67|PEXC_CRILO Peroxisome assembly protein 12 (Peroxin-12)... 172 1e-41
ref|XP_582391.1| PREDICTED: similar to Peroxisome assembly prote... 162 2e-38
gb|AAH76735.1| Pex12-prov protein [Xenopus laevis] 158 2e-37
ref|XP_415773.1| PREDICTED: similar to Peroxisome assembly prote... 155 2e-36
gb|AAQ91259.1| peroxisomal biogenesis factor 12 [Danio rerio] 150 6e-35
emb|CAG05957.1| unnamed protein product [Tetraodon nigroviridis] 149 1e-34
emb|CAA92113.1| Hypothetical protein F08B12.2 [Caenorhabditis el... 135 3e-30
emb|CAG81532.1| unnamed protein product [Yarrowia lipolytica CLI... 118 3e-25
gb|EAK81282.1| hypothetical protein UM00297.1 [Ustilago maydis 5... 114 6e-24
ref|NP_956499.1| hypothetical protein LOC393174 [Danio rerio] gi... 109 2e-22
>ref|NP_187096.2| Pex2/Pex12 N-terminal domain-containing protein [Arabidopsis
thaliana]
Length = 393
Score = 543 bits (1398), Expect = e-153
Identities = 260/392 (66%), Positives = 315/392 (80%), Gaps = 23/392 (5%)
Query: 1 MLFQVGGQGSRPTFFEMAAAEQLPRSLRAALTYSIGVLALRTPFLHKLLDYEHESFSLLM 60
MLFQVGG+G+RPTFFEMAAA+QLP SLRAALTYS+GV ALR FLHK+LDYE E F+ LM
Sbjct: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
Query: 61 LVLEAHSLRTTDASFSESLYGLRRRPANIKLNDNDSSSSSSQ------LRRRQKLLSLLF 114
L+LE HSLRTTD SF+ESLYGLRR+ A ++L + + SS+ L +RQ++LS++F
Sbjct: 61 LILEGHSLRTTDGSFAESLYGLRRKSARLRLRKDSARKDSSEEVQHSGLEKRQRILSVVF 120
Query: 115 LVVLPYLKSKLHSIYNKEREARIQATIWGDENESY-----------------TFNARASV 157
LVVLPY KSKLH+IYNKEREAR++ ++WG E++ + + N SV
Sbjct: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV 180
Query: 158 TTLITKRFQKIVGLCYPLLHAGTEGFQFAYQLLYLLDATGYYSLALHALGIHVCRATGQE 217
+ + +K + +CYP +HA +EG F YQLLYLLDATG+YSL L ALGI VCRATGQE
Sbjct: 181 RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE 240
Query: 218 LMDASSRISKIRSRERERLRGPQWIKTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWW 277
LMD SSRISKIR+ ERERLRGP W+KT+QGALLSC+Y VLDYAQTGLIAAVF FKMMEWW
Sbjct: 241 LMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 300
Query: 278 YQSAEERMSAPTVYPPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFC 337
YQSAEER+SAPTVYPPPPPPP PK+AKEG+ LP DR++C LCLQKR NPSV+TVSGFVFC
Sbjct: 301 YQSAEERLSAPTVYPPPPPPPAPKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFC 360
Query: 338 YACIFKFLTQYKRCPATMVPATVDQIRRLFHD 369
Y+C+FK++++YKRCP T++PA+VDQIRRLF D
Sbjct: 361 YSCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 392
>gb|AAP54200.1| putative peroxin [Oryza sativa (japonica cultivar-group)]
gi|37535222|ref|NP_921913.1| putative peroxin [Oryza
sativa (japonica cultivar-group)]
gi|13489174|gb|AAK27808.1| putative peroxin [Oryza
sativa (japonica cultivar-group)]
Length = 369
Score = 489 bits (1260), Expect = e-137
Identities = 249/394 (63%), Positives = 292/394 (73%), Gaps = 49/394 (12%)
Query: 1 MLFQVGGQGSRPTFFEMAAAEQLPRSLRAALTYSIGVLALRTPFLHKLLDYEHESFSLLM 60
MLFQVGGQG+RPTFFEM+AA+QLP SLRAAL+YS+GV ALR P LHK+LDYE E F+LLM
Sbjct: 1 MLFQVGGQGARPTFFEMSAAQQLPASLRAALSYSLGVFALRRPLLHKVLDYEDEFFALLM 60
Query: 61 LVLEAHSLRTTDASFSESLYGLRRRPANIKLNDNDSSSSS------SQLRRRQKLLSLLF 114
VLE+HSLRTTD SFSESLYGLRRRP + + + S + S S LR+RQK+LS++F
Sbjct: 61 AVLESHSLRTTDGSFSESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVF 120
Query: 115 LVVLPYLKSKLHSIYNKEREARIQATIWGD-----------ENESYTFNARASVTT---- 159
LVVLPY KSKL SIYNKEREAR+QA++WG ++ T A+ TT
Sbjct: 121 LVVLPYFKSKLQSIYNKEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTGEVS 180
Query: 160 ---LITKRFQKIVGLCYPLLHAGTEGFQFAYQLLYLLDATGYYSLALHALGIHVCRATGQ 216
I K F ++G+CYP +HA EG FAYQLLYLLD T +YS ALHALG+HVCRATGQ
Sbjct: 181 NMARIKKNFAALIGVCYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATGQ 240
Query: 217 ELMDASSRISKIRSRERERLRGPQWIKTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEW 276
EL T+Q LL+C YT LDYAQTGLIAAVFFFKMMEW
Sbjct: 241 EL-------------------------TMQRVLLNCMYTSLDYAQTGLIAAVFFFKMMEW 275
Query: 277 WYQSAEERMSAPTVYPPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVF 336
WYQSAEERMSAPTVYPPPPPPP PKVAK+G+ LP DRT+CPLC QKR NPSV++ SGFVF
Sbjct: 276 WYQSAEERMSAPTVYPPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFVF 335
Query: 337 CYACIFKFLTQYKRCPATMVPATVDQIRRLFHDV 370
CY+CIFK ++Q+KRCP T++PATV+QIRRLFHD+
Sbjct: 336 CYSCIFKSVSQHKRCPITLMPATVEQIRRLFHDL 369
>gb|AAF63777.1| unknown protein [Arabidopsis thaliana]
gi|12585318|sp|Q9M841|PEXC_ARATH Putative peroxisome
assembly protein 12 (Peroxin-12)
Length = 372
Score = 483 bits (1244), Expect = e-135
Identities = 241/396 (60%), Positives = 293/396 (73%), Gaps = 52/396 (13%)
Query: 1 MLFQVGGQGSRPTFFEMAAAEQLPRSLRAALTYSIGVLALRTPFLHKLLDYEHESFSLLM 60
MLFQVGG+G+RPTFFEMAAA+QLP SLRAALTYS+GV ALR FLHK+LDYE E F+ LM
Sbjct: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
Query: 61 LVLEAHSLRTTDASFSESLYGLRRRPANIKLNDNDSSSSSSQ------LRRRQKLLSLLF 114
L+LE HSLRTTD SF+ESLYGLRR+ A ++L + + SS+ L +RQ++LS++F
Sbjct: 61 LILEGHSLRTTDGSFAESLYGLRRKSARLRLRKDSARKDSSEEVQHSGLEKRQRILSVVF 120
Query: 115 LVVLPYLKSKLHSIYNKEREARIQATIWGDENESY-----------------TFNARASV 157
LVVLPY KSKLH+IYNKEREAR++ ++WG E++ + + N SV
Sbjct: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV 180
Query: 158 TTLITKRFQKIVGLCYPLLHAGTEGFQFAYQLLYLLDATGYYSLALHALGIHVCRATGQE 217
+ + +K + +CYP +HA +EG F YQLLYLLDATG+YSL L ALGI VCRATGQE
Sbjct: 181 RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE 240
Query: 218 LMDASSRISKIRSRERERLRGPQWIKTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWW 277
L T+QGALLSC+Y VLDYAQTGLIAAVF FKMMEWW
Sbjct: 241 L-------------------------TVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 275
Query: 278 YQSAEERMSAPTVYPPPPPPPPPKV----AKEGVQLPSDRTICPLCLQKRVNPSVMTVSG 333
YQSAEER+SAPTVYPPPPPPP PKV AKEG+ LP DR++C LCLQKR NPSV+TVSG
Sbjct: 276 YQSAEERLSAPTVYPPPPPPPAPKVINQMAKEGIPLPPDRSLCALCLQKRANPSVVTVSG 335
Query: 334 FVFCYACIFKFLTQYKRCPATMVPATVDQIRRLFHD 369
FVFCY+C+FK++++YKRCP T++PA+VDQIRRLF D
Sbjct: 336 FVFCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 371
>dbj|BAC42305.1| unknown protein [Arabidopsis thaliana]
Length = 152
Score = 270 bits (689), Expect = 7e-71
Identities = 120/151 (79%), Positives = 139/151 (91%)
Query: 219 MDASSRISKIRSRERERLRGPQWIKTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWY 278
MD SSRISKIR+ ERERLRGP W+KT+QGALLSC+Y VLDYAQTGLIAAVF FKMMEWWY
Sbjct: 1 MDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWY 60
Query: 279 QSAEERMSAPTVYPPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCY 338
QSAEER+SAPTVYPPPPPPP PK+AKEG+ LP DR++C LCLQKR NPSV+TVSGFVFCY
Sbjct: 61 QSAEERLSAPTVYPPPPPPPAPKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCY 120
Query: 339 ACIFKFLTQYKRCPATMVPATVDQIRRLFHD 369
+C+FK++++YKRCP T++PA+VDQIRRLF D
Sbjct: 121 SCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 151
>ref|XP_638103.1| hypothetical protein DDB0186545 [Dictyostelium discoideum]
gi|60466547|gb|EAL64599.1| hypothetical protein
DDB0186545 [Dictyostelium discoideum]
Length = 459
Score = 200 bits (509), Expect = 5e-50
Identities = 144/464 (31%), Positives = 215/464 (46%), Gaps = 106/464 (22%)
Query: 3 FQVGGQGSRPTFFEMAAAEQLPRSLRAALTYSIGVLALRTPFLHKLLDYEHESFSLLMLV 62
F G +RP+FFEM Q+ S + AL Y VL+ R P +++Y E F L+L+
Sbjct: 6 FDNGHDPNRPSFFEMLNQHQMMPSFKPALKYIFTVLSQRNPKFRYIVNYYDECFYSLLLL 65
Query: 63 LEAHSLRTTDASFSESLYGLRR-RPANIKLND---------------------------- 93
LE H L+ + SFSE+ Y L+R +P N N
Sbjct: 66 LEYHYLKYYEGSFSENFYNLKRIKPRNNNANGDGDTLFSLLKRLVVTPSNAGQGPETYTK 125
Query: 94 -------------NDSSSSSSQ---------LRRRQKLLSLLFLVVLPYLKSKLHSIYNK 131
N +++SSSQ ++ + SL++LV++PY K KL Y K
Sbjct: 126 SQILKKSFAMIRRNRAAASSSQQAKDDLNTMIQDSDRKESLIYLVLIPYFKGKLDEYYKK 185
Query: 132 E------------------------------REARIQATIWGDENESYTFNARASVTTLI 161
E + + Q TI N S N + + LI
Sbjct: 186 ESDPLAELGLVSSDNNNNNNDNINDQIQQLEEQIQQQQTIVNGNNNSNNNNKKLKIKFLI 245
Query: 162 TKRFQK----------IVGLCYPLLHAGTEGFQFAYQLLYLLDATGYYSLALHALGIHVC 211
RF K I YP + A E F YQLLYL + T YY+ H I +
Sbjct: 246 LIRFLKGSKTLKKLKTIFLKVYPFISAIYEALFFIYQLLYLYEYTNYYTPFFHFQNIQLK 305
Query: 212 RATGQELMDASSRISKIRSRERERLRGPQWIKTLQGA-----LLSCTYTVLDYAQTGLIA 266
R + D S I +R R+R+ +++ G+ L+S ++LDY++ L
Sbjct: 306 RLNHK---DIESHRVVISNRRRDRIN---FVRDWPGSSFFVRLVSILDSILDYSKYILPL 359
Query: 267 AVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNP 326
+VF FK +EWWY +E R+SAPT+ P P PP P K A G+++P D+ +CPLCL++R NP
Sbjct: 360 SVFIFKSLEWWY--SENRISAPTL-PIPTPPTPSKRAPGGLEIPRDKRLCPLCLKERTNP 416
Query: 327 SVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQIRRLFHDV 370
++ SGFVFCY CIF ++ ++ +CP T +P +Q+R+++ V
Sbjct: 417 TICG-SGFVFCYPCIFGYVNEHSKCPITFLPTNTEQLRKIYETV 459
>ref|XP_523610.1| PREDICTED: peroxisomal biogenesis factor 12 [Pan troglodytes]
Length = 584
Score = 182 bits (463), Expect = 1e-44
Identities = 121/364 (33%), Positives = 185/364 (50%), Gaps = 32/364 (8%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ FE+ A + L ++R AL + + VLA P FL + D E F+LL L+L+ H
Sbjct: 242 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFD---EIFTLLDLLLQQH 298
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSS--SSSQLRRRQKLLSLLFLVVLPYLKSK 124
L T ASFSE+ YGL+R I + D S +S+ L ++Q S++FLV+LPYLK K
Sbjct: 299 YLSRTSASFSENFYGLKR----IVMGDTHKSQRLASAGLPKQQLWKSIMFLVLLPYLKVK 354
Query: 125 LHSIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQ 184
L + + RE DE + ++R KRF + YP ++ EG+
Sbjct: 355 LEKLVSSLREE--------DEYSIHPPSSR-------WKRFYRAFLAAYPFVNMAWEGWF 399
Query: 185 FAYQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQWIKT 244
QL Y+L ++S L G+ + R T Q++ + +K +R + IK+
Sbjct: 400 LVQQLRYILGKAQHHSPLLRLAGVQLGRLTVQDIQALEHKPAKASMMQRPARSVSEKIKS 459
Query: 245 LQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSA-EERMSAPTVYPPPPPPPPPKVA 303
AL V TGL VFF + ++WWY S +E + + T P PPPP
Sbjct: 460 ---ALKKAVGGVALSLSTGLSVGVFFLQFLDWWYSSENQETIKSLTALPTPPPPVHLDYN 516
Query: 304 KEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQI 363
+ LP +T+CPLC + RVN +V+ SG+VFCY C+F ++ ++ CP T P V +
Sbjct: 517 SDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFHYVRSHQACPITGYPTEVQHL 576
Query: 364 RRLF 367
+L+
Sbjct: 577 IKLY 580
>gb|AAH31085.1| Peroxisomal biogenesis factor 12 [Homo sapiens]
gi|1938369|gb|AAC68813.1| peroxin 12 [Homo sapiens]
gi|1938367|gb|AAC68812.1| peroxin 12 [Homo sapiens]
gi|3024371|sp|O00623|PEX12_HUMAN Peroxisome assembly
protein 12 (Peroxin-12) (Peroxisome assembly factor-3)
(PAF-3) gi|4505721|ref|NP_000277.1| peroxisomal
biogenesis factor 12 [Homo sapiens]
gi|3308973|dbj|BAA31559.1| peroxisome assembly factor-3
(PAF-3) [Homo sapiens]
Length = 359
Score = 179 bits (454), Expect = 1e-43
Identities = 119/364 (32%), Positives = 184/364 (49%), Gaps = 32/364 (8%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ FE+ A + L ++R AL + + VLA P FL + D E F+LL L+L+ H
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFD---EIFTLLDLLLQQH 73
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSS--SSSQLRRRQKLLSLLFLVVLPYLKSK 124
L T ASFSE+ YGL+R I + D S +S+ L ++Q S++FLV+LPYLK K
Sbjct: 74 YLSRTSASFSENFYGLKR----IVMGDTHKSQRLASAGLPKQQLWKSIMFLVLLPYLKVK 129
Query: 125 LHSIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQ 184
L + + RE DE + ++R KRF + YP ++ EG+
Sbjct: 130 LEKLVSSLREE--------DEYSIHPPSSR-------WKRFYRAFLAAYPFVNMAWEGWF 174
Query: 185 FAYQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQWIKT 244
QL Y+L ++S L G+ + R T Q++ + +K ++ + I +
Sbjct: 175 LVQQLRYILGKAQHHSPLLRLAGVQLGRLTVQDIQALEHKPAKASMMQQPARSVSEKINS 234
Query: 245 LQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSA-EERMSAPTVYPPPPPPPPPKVA 303
AL V TGL VFF + ++WWY S +E + + T P PPPP
Sbjct: 235 ---ALKKAVGGVALSLSTGLSVGVFFLQFLDWWYSSENQETIKSLTALPTPPPPVHLDYN 291
Query: 304 KEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQI 363
+ LP +T+CPLC + RVN +V+ SG+VFCY C+F ++ ++ CP T P V +
Sbjct: 292 SDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFHYVRSHQACPITGYPTEVQHL 351
Query: 364 RRLF 367
+L+
Sbjct: 352 IKLY 355
>ref|XP_548259.1| PREDICTED: similar to Peroxisome assembly protein 12 (Peroxin-12)
(Peroxisome assembly factor-3) (PAF-3) [Canis
familiaris]
Length = 359
Score = 176 bits (446), Expect = 1e-42
Identities = 118/365 (32%), Positives = 185/365 (50%), Gaps = 34/365 (9%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ FE+ A + L ++R AL + + VLA P F + D E F+LL L+L+ H
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFFWRWFD---EIFTLLDLLLQQH 73
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSS--SSSQLRRRQKLLSLLFLVVLPYLKSK 124
L T ASFSE+ YGL+R I + D +S+ L ++Q S++FLV+ PYLK K
Sbjct: 74 YLSKTSASFSENFYGLKR----IVMGDTHKLERLASAGLPKKQFWKSIMFLVLFPYLKVK 129
Query: 125 LHSIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQ 184
L + + RE DE + ++R K+F + YP ++ EG
Sbjct: 130 LEKLISSLREE--------DEYSIHPPSSR-------WKQFYRAFLAAYPFVNMAWEGCF 174
Query: 185 FAYQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERE-RLRGPQWIK 243
F QL Y+L ++S L G+ + R T Q++ + ++ ++ R G +
Sbjct: 175 FVQQLRYILGKAQHHSPLLRLAGVRLGRLTVQDIQALEHKPAEASMMQQPARSVGDKIKS 234
Query: 244 TLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSA-EERMSAPTVYPPPPPPPPPKV 302
+L+ AL T+ TGL VFF + +EWWY S +E + + T P PPPP
Sbjct: 235 SLKKALGGAALTL----STGLSVGVFFLQFLEWWYSSENQETIKSLTALPTPPPPVHLDY 290
Query: 303 AKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQ 362
+ LP +T+CPLC + RVN +V+ SG+VFCY C+F ++ ++ CP T P V
Sbjct: 291 NSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNYVRSHQTCPITGYPTEVQH 350
Query: 363 IRRLF 367
+ +L+
Sbjct: 351 LIKLY 355
>ref|NP_598786.1| peroxisomal biogenesis factor 12 [Mus musculus]
gi|56205114|emb|CAI25414.1| peroxisomal biogenesis
factor 12 [Mus musculus] gi|18256304|gb|AAH21800.1|
Peroxisomal biogenesis factor 12 [Mus musculus]
gi|28380105|sp|Q8VC48|PEX12_MOUSE Peroxisome assembly
protein 12 (Peroxin-12) gi|26330744|dbj|BAC29102.1|
unnamed protein product [Mus musculus]
Length = 359
Score = 175 bits (444), Expect = 2e-42
Identities = 117/362 (32%), Positives = 181/362 (49%), Gaps = 28/362 (7%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ FE+ A + L ++R AL + + VLA P FL + D E F+LL +L+ H
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFLWRWFD---EIFTLLDFLLQQH 73
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLH 126
L T ASFSE YGL+R A + + +S+ L + S +FLV+LPYLK KL
Sbjct: 74 YLSRTSASFSEHFYGLKRIVAGS--SPHLQRPASAGLPKEHLWKSAMFLVLLPYLKVKLE 131
Query: 127 SIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFA 186
+ + RE DE + ++R KRF + YP ++ EG+
Sbjct: 132 KLASSLREE--------DEYSIHPPSSR-------WKRFYRAFLAAYPFVNMAWEGWFLT 176
Query: 187 YQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQWIKTLQ 246
QL Y+L ++S L G+ + R T Q++ R+ + S +E +R + ++
Sbjct: 177 QQLRYILGKAEHHSPLLKLAGVRLARLTAQDMQAIKQRLVEA-SAMQEPVRSVG--EKIK 233
Query: 247 GALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSA-EERMSAPTVYPPPPPPPPPKVAKE 305
AL V TGL VFF + ++WWY S +E + + T P PPPP +
Sbjct: 234 SALKKAVGGVALSLSTGLSVGVFFLQFLDWWYSSENQEAIKSLTALPTPPPPVHLDYNSD 293
Query: 306 GVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQIRR 365
LP +T+CPLC + RVN +V+ SG+VFCY C+F ++ ++ CP T P V + +
Sbjct: 294 SPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNYVRSHQACPITGYPTEVQHLIK 353
Query: 366 LF 367
L+
Sbjct: 354 LY 355
>ref|NP_446373.1| peroxisomal biogenesis factor 12 [Rattus norvegicus]
gi|47940691|gb|AAH72481.1| Peroxisomal biogenesis factor
12 [Rattus norvegicus] gi|12585292|sp|O88177|PEX12_RAT
Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome
assembly factor-3) (PAF-3) gi|3308971|dbj|BAA31558.1|
peroxisome assembly factor-3 (PAF-3) [Rattus norvegicus]
Length = 359
Score = 172 bits (436), Expect = 1e-41
Identities = 116/363 (31%), Positives = 179/363 (48%), Gaps = 30/363 (8%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ FE+ A + L ++R AL + + VLA P F + D E F+LL +L+ H
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFFWRWFD---EIFTLLDFLLQQH 73
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLH 126
L T ASFSE YGL+R A + +S+ L + S +FLV+LPYLK KL
Sbjct: 74 YLSRTSASFSEHFYGLKRIVAGS--SPQLQRPASAGLPKEHLWKSAMFLVLLPYLKVKLE 131
Query: 127 SIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFA 186
+ + RE + Y+ + +S KRF ++ YP + EG+
Sbjct: 132 KLASTLRE-----------EDEYSIHPPSSHW----KRFYRVFLAAYPFVTMTWEGWFLT 176
Query: 187 YQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRS-RERERLRGPQWIKTL 245
QL Y+L ++S L G+ + R T Q++ R+ + + +E R G K +
Sbjct: 177 QQLRYILGKAEHHSPLLKLAGVRLGRLTAQDIQAMEHRLVEASAMQEPVRSIG----KKI 232
Query: 246 QGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSA-EERMSAPTVYPPPPPPPPPKVAK 304
+ AL V TGL VFF + ++WWY S +E + + T P PPPP
Sbjct: 233 KSALKKAVGGVALSLSTGLSVGVFFLQFLDWWYSSENQETIKSLTALPTPPPPVHLDYNS 292
Query: 305 EGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQIR 364
+ LP +T+CPLC + RVN +V+ SG+VFCY C+F ++ ++ CP T P V +
Sbjct: 293 DSPLLPKMKTVCPLCRKARVNDTVLATSGYVFCYRCVFNYVRSHQACPITGYPTEVQHLI 352
Query: 365 RLF 367
+L+
Sbjct: 353 KLY 355
>sp|Q9ET67|PEXC_CRILO Peroxisome assembly protein 12 (Peroxin-12)
gi|9884647|dbj|BAB11978.1| peroxin12 [Cricetulus
longicaudatus]
Length = 359
Score = 172 bits (436), Expect = 1e-41
Identities = 114/362 (31%), Positives = 176/362 (48%), Gaps = 28/362 (7%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ FE+ A + L ++R AL + + VLA P F + D E F+LL +L+ H
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFFWRWFD---EIFTLLDFLLQQH 73
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLH 126
L T ASFSE YGL+R A + +S+ L + S +FLV+LPYLK KL
Sbjct: 74 YLSRTSASFSEHFYGLKRIVAGS--SQQPQRPASAGLPKEHLWKSTMFLVLLPYLKVKLE 131
Query: 127 SIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFA 186
+ + RE + Y+ + +S KRF + YP ++ EG+
Sbjct: 132 KLASSLRE-----------EDEYSIHPPSSHW----KRFYRAFLAAYPFVNMAWEGWFLT 176
Query: 187 YQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQWIKTLQ 246
QL Y+L ++S L G+ + R T Q++ R+S+ + + IK
Sbjct: 177 QQLRYILGKAEHHSPLLKLAGVRLGRLTAQDIQAIEHRLSEASVMQDPVRSVGEKIKL-- 234
Query: 247 GALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSA-EERMSAPTVYPPPPPPPPPKVAKE 305
AL + TGL VFF + ++WWY S +E + + T P PPPP +
Sbjct: 235 -ALKKAVGGIALSLSTGLSVGVFFLQFLDWWYSSENQETIKSLTALPTPPPPVHLDYNSD 293
Query: 306 GVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQIRR 365
LP +T+CPLC + RVN +V+ SG+VFCY C+F ++ ++ CP T P V + +
Sbjct: 294 SPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNYVRSHQACPITGYPTEVQHLIK 353
Query: 366 LF 367
L+
Sbjct: 354 LY 355
>ref|XP_582391.1| PREDICTED: similar to Peroxisome assembly protein 12 (Peroxin-12)
(Peroxisome assembly factor-3) (PAF-3) [Bos taurus]
Length = 352
Score = 162 bits (409), Expect = 2e-38
Identities = 112/364 (30%), Positives = 178/364 (48%), Gaps = 39/364 (10%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ FE+ A + L ++R AL + + VLA P F + D E F+LL L+L+ H
Sbjct: 17 QPSIFEVVAQDSLMSAVRPALQHVVKVLAESNPAHFGFFWRWFD---EIFTLLDLLLQQH 73
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSS--SSSQLRRRQKLLSLLFLVVLPYLKSK 124
L T ASFSE+ YGL+R I + D +++ L ++Q + S++FLV+LPYLK K
Sbjct: 74 YLSKTSASFSENFYGLKR----IVMGDQHKLQRLANAGLPKQQFMKSIMFLVLLPYLKVK 129
Query: 125 LHSIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQ 184
L + + RE DE + ++R KRF + YP ++ EG+
Sbjct: 130 LEKLVSSLREE--------DEYSIHPPSSR-------WKRFYRAFLAAYPFVNMAWEGWF 174
Query: 185 FAYQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQWIKT 244
QL Y+L ++S L G+ + R T Q++ + ++ + ++ T
Sbjct: 175 LVQQLRYILGKAQHHSPLLRLAGVRLGRLTVQDIQALEHKPAEASMMQLPAGSANIFLNT 234
Query: 245 LQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSA-EERMSAPTVYPPPPPPPPPKVA 303
+ S TVL K +EWWY S +E + + T P PPPP
Sbjct: 235 AE-LFFSLDITVLHPLPQ---------KFLEWWYSSENQETIKSLTALPTPPPPVHLDYN 284
Query: 304 KEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQI 363
+ LP +T+CPLC + RVN +V+ SG+VFCY C+F ++ ++ CP T P V +
Sbjct: 285 SDSPLLPKMKTVCPLCRKNRVNDTVLATSGYVFCYRCVFHYVRSHQACPITGYPTEVQHL 344
Query: 364 RRLF 367
+L+
Sbjct: 345 IKLY 348
>gb|AAH76735.1| Pex12-prov protein [Xenopus laevis]
Length = 353
Score = 158 bits (400), Expect = 2e-37
Identities = 115/361 (31%), Positives = 179/361 (48%), Gaps = 32/361 (8%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTPFLHKLL-DYEHESFSLLMLVLEAHSLR 69
RP+ FE+ A E L + R AL + + VLA P + L + E ++LL +L+ H L
Sbjct: 17 RPSIFEVVAQESLMAAARPALHHIVKVLAESNPARYGTLWRWFDELYTLLECLLQQHYLS 76
Query: 70 TTDASFSESLYGLRRRPANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLHSIY 129
ASFSE+ YGL+R ++ + L R++ SLL LV++PYL+ KL +
Sbjct: 77 WASASFSENFYGLKRVTLGKQVGQRN-------LARKEYWKSLLLLVLIPYLRIKLEKLV 129
Query: 130 NKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFAYQL 189
N RE E Y+ S KR K + YP L G E + YQL
Sbjct: 130 NSLRE-----------EEDYSIQNPTS----FHKRCYKAILASYPFLKLGWEAWFLFYQL 174
Query: 190 LYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQWIKT-LQGA 248
Y+L ++S L G+ + R T ++L A + ++ + + Q I++ L+ A
Sbjct: 175 RYILWNGKHHSPLLRLAGVQLARLTMEDLR-AMEKQEELTNTVSNVVSISQHIRSILKKA 233
Query: 249 LLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGVQ 308
L + T +V + L VFF + ++WWY SAE R + ++ P PPPP E
Sbjct: 234 LGAVTLSV----SSSLSLGVFFLQFLDWWY-SAENRETLKSLGNLPVPPPPIHFDLETYS 288
Query: 309 --LPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQIRRL 366
LP RT+CPLC + RVN + + SG+VFCY C + ++ ++RCP + P + + +L
Sbjct: 289 PLLPKLRTVCPLCRKVRVNDTALGTSGYVFCYRCAYYYVKTHQRCPVSGYPTELQHLIKL 348
Query: 367 F 367
+
Sbjct: 349 Y 349
>ref|XP_415773.1| PREDICTED: similar to Peroxisome assembly protein 12 (Peroxin-12)
(Peroxisome assembly factor-3) (PAF-3) [Gallus gallus]
Length = 323
Score = 155 bits (391), Expect = 2e-36
Identities = 97/339 (28%), Positives = 165/339 (48%), Gaps = 25/339 (7%)
Query: 31 LTYSIGVLALRTPFLHKLLDYEH-ESFSLLMLVLEAHSLRTTDASFSESLYGLRRRPANI 89
++ S+ VLA P + LL E + LL +L+ H L ASFSE+ Y L+R P
Sbjct: 4 VSLSMQVLAESNPGQYGLLWRRFDEIYVLLDFLLQQHYLARCSASFSENFYSLKRIPTG- 62
Query: 90 KLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLHSIYNKEREARIQATIWGDENESY 149
+ +++ L ++Q SLL L+++PYLK KL + + RE + Y
Sbjct: 63 --DCKQQPLATAGLPKKQHWKSLLLLILVPYLKGKLEKLVSSLRE-----------EDEY 109
Query: 150 TFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFAYQLLYLLDATGYYSLALHALGIH 209
+ + +S KRF + YP ++ EG+ QL Y+L ++S L G+
Sbjct: 110 SIHPPSSSW----KRFYRAFLAAYPFINMAWEGWFLIQQLCYILGKAQHHSPLLRLAGVR 165
Query: 210 VCRATGQELMDASSRISKIRSRERERLRGPQWIKTLQGALLSCTYTVLDYAQTGLIAAVF 269
+ R T +++ +++ S + ++ +Q A+ + TGL VF
Sbjct: 166 LVRLTAEDIQALEKKLAVAASSQTHSIK-----TQVQSAVRKALGGIAFSLSTGLSVCVF 220
Query: 270 FFKMMEWWYQSA-EERMSAPTVYPPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNPSV 328
F + ++WWY S +E + + T P PPPP + LP +T+CPLC + RVN +
Sbjct: 221 FLQFLDWWYSSENQETIKSLTALPTPPPPVHLDHGVDSALLPKLKTVCPLCRKVRVNATA 280
Query: 329 MTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQIRRLF 367
++ SGFVFCY C++ ++ ++RCP T + + +L+
Sbjct: 281 LSTSGFVFCYRCVYNYVKTHQRCPITGYATELQHLVKLY 319
>gb|AAQ91259.1| peroxisomal biogenesis factor 12 [Danio rerio]
Length = 350
Score = 150 bits (379), Expect = 6e-35
Identities = 100/358 (27%), Positives = 173/358 (47%), Gaps = 29/358 (8%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTPFLHKLLDYEH-ESFSLLMLVLEAHSLR 69
RP+ FE+ A + L +++ AL +++ +LA P + +L E + +L ++L+ H L
Sbjct: 17 RPSVFEVLAQDSLMTAVKPALLHAVKILATSNPARYGVLWRRFDEIYVILDMLLQHHFLS 76
Query: 70 TTDASFSESLYGLRRRPANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLHSIY 129
T ASFSE+ YGL+R + + + ++ LRRRQ SLL L ++PYL +KL I
Sbjct: 77 RTSASFSENFYGLKR------VGSHSARAAHLGLRRRQHWRSLLLLALIPYLHTKLEKIL 130
Query: 130 NKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFAYQL 189
++R DE++ F+ R + L ++ + YP + +G+ F QL
Sbjct: 131 ARQR----------DEDD---FSIRLPQSFL--QKMYRAFLAAYPFVCMAWDGWVFCQQL 175
Query: 190 LYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQWIKTLQGAL 249
LY+ T +S L G+ + T ++ ++ E + G + + LQ +
Sbjct: 176 LYVFGKTRTHSPLLWLAGVKLSYLTANDIHSLD-----LKPSGPELISGQSFGEKLQRVV 230
Query: 250 LSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGVQL 309
+ V T L VFF + +EWWY S + P PPPP ++E
Sbjct: 231 STAVGGVAVSLSTSLSIGVFFLQFLEWWYSSENQSTVKSLTSLPTPPPPLHLHSQETTH- 289
Query: 310 PSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQIRRLF 367
+ +CP+C + R N + + SG+VFCY CI+ ++ RCP T P+ + + +++
Sbjct: 290 -THIKVCPICRKVRTNDTALATSGYVFCYRCIYVYVKANHRCPLTSYPSELQHLIKIY 346
>emb|CAG05957.1| unnamed protein product [Tetraodon nigroviridis]
Length = 348
Score = 149 bits (377), Expect = 1e-34
Identities = 104/364 (28%), Positives = 181/364 (49%), Gaps = 41/364 (11%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ FE+ A E L ++R AL +++ VLA P FL + D E + LL L+L+ H
Sbjct: 16 QPSIFEVLAQESLMEAVRPALRHAVKVLAESNPSRFGFLWRRFD---ELYLLLDLLLQNH 72
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLH 126
L ASFSE+ YGL+R PA + + L R+ SLL L ++PYL++KL
Sbjct: 73 FLSHCSASFSENFYGLKRVPAGQR------PAVRLGLNRKSLWRSLLLLCLVPYLRAKLE 126
Query: 127 SIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFA 186
+ ++R DE + F+ R + + ++R + YP + + + + F
Sbjct: 127 ATLARQR----------DEED---FSIRLAQSR--SQRLYRAAVAAYPYISSAWQLWAFF 171
Query: 187 YQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQW---IK 243
+QLL++ +S L + + R + ++ D + ++ + W +
Sbjct: 172 HQLLFVFGVAKGHSPLLWLARVRLARLSAADIRDMELKAARSGTPAGGSFGRRAWQLASR 231
Query: 244 TLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVA 303
+G +S + T L VFF + +EWWY S++ R + + P PPPP +
Sbjct: 232 AARGVAVSLS--------TSLSLGVFFLQFLEWWY-SSDNRDTVKALTSTPVPPPPLHLQ 282
Query: 304 KEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVPATVDQI 363
++ PS+RT CPLC + R N +V++ SGFVFCY CI+ ++ +RCP + P+ + +
Sbjct: 283 EDDQSSPSNRT-CPLCRRLRANATVLSTSGFVFCYRCIYTYVKANRRCPVSGYPSELQHL 341
Query: 364 RRLF 367
+++
Sbjct: 342 IKIY 345
>emb|CAA92113.1| Hypothetical protein F08B12.2 [Caenorhabditis elegans]
gi|3914317|sp|Q19189|PEX12_CAEEL Putative peroxisome
assembly protein 12 (Peroxin-12)
gi|17551466|ref|NP_509908.1| peroxisomal biogenesis
factor 12, PeRoXisome assembly factor PRX-12 (prx-12)
[Caenorhabditis elegans]
Length = 359
Score = 135 bits (339), Expect = 3e-30
Identities = 100/370 (27%), Positives = 176/370 (47%), Gaps = 46/370 (12%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTP----FLHKLLDYEHESFSLLMLVLEAH 66
+P+ F++ A E L S+R AL + + LA P +H+ D E + + L+L+ H
Sbjct: 22 QPSVFDIIAQENLATSIRPALQHLVKYLAFFKPKTFLSVHRNFD---EYYIIFDLILQNH 78
Query: 67 SLRTTDASFSESLYGLRRRPANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLH 126
LR ASF+E+ Y ++R + ND R++++SL+ LV PY+++KL+
Sbjct: 79 YLRNYGASFTENFYSMKRIASGTGNPPNDG---------RERIMSLITLVGWPYVENKLN 129
Query: 127 SIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFA 186
+Y++ +E Y + +S+ + K QK+ + +P + + + A
Sbjct: 130 QLYDRLKEV-------------YECRSWSSINGMKAK-CQKMFVIIWPYIKTALKAVKSA 175
Query: 187 YQLLYLLDATGYYSLALHALGIHVCRATGQEL---------MDASSRISKIRSRERERLR 237
QL Y+L+ + +S L+ G+ + T ++L + +IS+ E LR
Sbjct: 176 LQLAYILNRSSIHSPWLYFSGVILKHLTPEDLEAFNAVPLHLQTGYQISRGTLNEHIHLR 235
Query: 238 GPQWIKTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPP 297
+ + +L V GL FF + +++ Y + +++ + P P
Sbjct: 236 ---FFNRIWRFILGLPGIVSRLFAYGL----FFVQFLDYMYNTDLAKLTKTGLDGAIPSP 288
Query: 298 PPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRCPATMVP 357
P + E L D CP+CL+KRVN + + VSG+VFCY CI +++ Y +CP T P
Sbjct: 289 PHKMIISESEILSLDTNKCPICLKKRVNDTALFVSGYVFCYTCINQYVNTYNKCPVTGCP 348
Query: 358 ATVDQIRRLF 367
A V + RLF
Sbjct: 349 ANVQHLIRLF 358
>emb|CAG81532.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50551703|ref|XP_503326.1| hypothetical protein
[Yarrowia lipolytica]
Length = 408
Score = 118 bits (295), Expect = 3e-25
Identities = 100/375 (26%), Positives = 166/375 (43%), Gaps = 39/375 (10%)
Query: 12 PTFFEMAAAEQLPRSLRAALTYSIGVLALRTP-FLHKLLDYEHESFSLLMLVLEAHSLRT 70
PT FE+ +A+QL + ++ Y + A R P +L ++++ E ++L M ++E ++L+T
Sbjct: 17 PTLFELLSAKQLEGLIAPSVRYILAFYAQRHPRYLLRIVNRYDELYALFMGLVEYYNLKT 76
Query: 71 TDASFSESLYGLRR-----RPA-NIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSK 124
+ASF+E YGL+R PA + D + +L +++ SL FL+V+PY+K K
Sbjct: 77 WNASFTEKFYGLKRTQILTNPALRTRQAVPDLVEAEKRLSKKKIWGSLFFLIVVPYVKEK 136
Query: 125 LHSIYNKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQ 184
L + Y + + + I E + + F + YP++ G
Sbjct: 137 LDARYERLKGRYLARDI---NEERIEIKRTGTAQQIAVFEFDYWLLKLYPIVTMGCTTAT 193
Query: 185 FAYQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSR------------E 232
A+ +L+L T YS+ L I R T + + R S+ +
Sbjct: 194 LAFHMLFLFSVTRAYSIDDFLLNIQFSRMTRYDYQMETQRDSRNAANVAHTMKSISEYPV 253
Query: 233 RERLRGPQWIKTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERM------- 285
ER+ K A+ S + L Y L ++F K +EWWY S R
Sbjct: 254 AERVMLLLTTKAGANAMRSAALSGLSYV---LPTSIFALKFLEWWYASDFARQLNQKRRG 310
Query: 286 -SAPTVYPPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKF 344
+ P K+A+ + D + CPLC ++ VNP+V+ SG+VFCY CI++
Sbjct: 311 DLEDNLPVPDKVKGADKLAESVAKWKEDTSKCPLCSKELVNPTVIE-SGYVFCYTCIYRH 369
Query: 345 LTQYK-----RCPAT 354
L RCP T
Sbjct: 370 LEDGDEETGGRCPVT 384
>gb|EAK81282.1| hypothetical protein UM00297.1 [Ustilago maydis 521]
gi|49067244|ref|XP_397912.1| hypothetical protein
UM00297.1 [Ustilago maydis 521]
Length = 447
Score = 114 bits (284), Expect = 6e-24
Identities = 86/284 (30%), Positives = 141/284 (49%), Gaps = 18/284 (6%)
Query: 12 PTFFEMAAAEQLPRSLRAALTYSIGVLALRTP-FLHKLLDYEHESFSLLMLVLEAHSLRT 70
P+FFE+AA QL ++ A+ Y + VLA R P +L +++++ E ++LLM +E+H LR
Sbjct: 22 PSFFELAAQSQLSELIKPAVRYVVAVLAQRNPRYLLRIVNWFDEVYALLMTAVESHYLRV 81
Query: 71 TDASFSESLYGLRRRP------ANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSK 124
+SFSE+ YGLRRR +++ + S + + L +R+ LSLLFLV LPYL++K
Sbjct: 82 WGSSFSENFYGLRRRKRPGLSRSSVTRATSLSIAKTESLGKREIRLSLLFLVGLPYLRAK 141
Query: 125 LHSIYNKEREARIQ-ATIWGDEN---ESYTFNARASVTTLITKRFQKIVGLCYPLLHAGT 180
L I+ + A ++GD+ S+ +++ + L T Q + YP
Sbjct: 142 LDDIWERNGGGLTNTANLFGDDRTSAPSFQDSSQPLMKRLETTLMQ-VFKTAYPYFKTLY 200
Query: 181 EGFQFAYQLLYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQ 240
+ + Y + YL D T Y+ L + + V R + R + +R P
Sbjct: 201 QFWLLTYNVRYLFDKTPYWRPWLSLMRVDVRRVGPND----GPRRKMLPKNMPSLVRQP- 255
Query: 241 WIKTLQGALLSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEER 284
K L L + + + GL A++F FK +EWWY + R
Sbjct: 256 -TKFLAVVLKLVPGMLFEALKYGLPASIFLFKFLEWWYGADNPR 298
Score = 48.1 bits (113), Expect = 4e-04
Identities = 23/77 (29%), Positives = 36/77 (45%), Gaps = 2/77 (2%)
Query: 292 PPPPPPPPPKVAKEGVQLPSDRTICPLCLQKRVNPSVMTVSGFVFCYACIFKFLTQYKRC 351
P P P ++ + CPLC +N + SG+VFCY C F ++ Q+ C
Sbjct: 369 PTDAPTHPKLLSASANERKLIHNSCPLCGAMPINNPAVLPSGYVFCYTCAFNYVEQHATC 428
Query: 352 PAT--MVPATVDQIRRL 366
P + VP D +R++
Sbjct: 429 PVSSISVPERKDALRKV 445
>ref|NP_956499.1| hypothetical protein LOC393174 [Danio rerio]
gi|28279205|gb|AAH45976.1| Hypothetical protein MGC56182
[Danio rerio]
Length = 303
Score = 109 bits (272), Expect = 2e-22
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 28/290 (9%)
Query: 11 RPTFFEMAAAEQLPRSLRAALTYSIGVLALRTPFLHKLLDYEH-ESFSLLMLVLEAHSLR 69
RP+ FE+ A + L +++ AL +++ +LA P + +L E + +L ++L+ H L
Sbjct: 17 RPSVFEVLAQDSLMTAVKPALLHAVKILATSNPARYGVLWRRFDEIYVILDMLLQHHFLS 76
Query: 70 TTDASFSESLYGLRRRPANIKLNDNDSSSSSSQLRRRQKLLSLLFLVVLPYLKSKLHSIY 129
T ASFSE+ YGL+R + + + ++ LRRRQ SLL L ++PYL +KL I
Sbjct: 77 RTSASFSENFYGLKR------VGSHSARAAHLGLRRRQHWRSLLLLALIPYLHTKLEKIL 130
Query: 130 NKEREARIQATIWGDENESYTFNARASVTTLITKRFQKIVGLCYPLLHAGTEGFQFAYQL 189
++R DE++ F+ R + + L ++ + YP + +G+ F QL
Sbjct: 131 ARQR----------DEDD---FSIRLAQSFL--QKMYRAFLAAYPFVCMAWDGWVFCQQL 175
Query: 190 LYLLDATGYYSLALHALGIHVCRATGQELMDASSRISKIRSRERERLRGPQWIKTLQGAL 249
LY+ T +S L G+ + T ++ ++ E G + + LQ +
Sbjct: 176 LYVFGKTRTHSPLLWLAGVKLSYLTANDIHSLD-----LKPSGPELSSGQSFGEKLQRVV 230
Query: 250 LSCTYTVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPP 299
+ V T L VFF + +EWWY S+E + + ++ P PPPP
Sbjct: 231 SAAVGGVAVSLSTSLSIGVFFLQFLEWWY-SSENQSTVKSLTSLPTPPPP 279
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 625,868,072
Number of Sequences: 2540612
Number of extensions: 26379135
Number of successful extensions: 326630
Number of sequences better than 10.0: 487
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 271
Number of HSP's that attempted gapping in prelim test: 320897
Number of HSP's gapped (non-prelim): 2600
length of query: 370
length of database: 863,360,394
effective HSP length: 129
effective length of query: 241
effective length of database: 535,621,446
effective search space: 129084768486
effective search space used: 129084768486
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)
Medicago: description of AC137603.5