BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136954.11 + phase: 0
(174 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB09586.1| unnamed protein product [Arabidopsis thaliana] g... 134 1e-30
ref|XP_482671.1| unknown protein [Oryza sativa (japonica cultiva... 129 3e-29
dbj|BAD37548.1| hypothetical protein [Oryza sativa (japonica cul... 119 5e-26
emb|CAB81386.1| hypothetical protein [Arabidopsis thaliana] gi|4... 117 1e-25
gb|AAM63423.1| unknown [Arabidopsis thaliana] 117 1e-25
emb|CAB79891.1| hypothetical protein [Arabidopsis thaliana] gi|3... 115 4e-25
ref|NP_197874.1| expressed protein [Arabidopsis thaliana] 109 4e-23
gb|AAM15477.1| Expressed protein [Arabidopsis thaliana] gi|18400... 107 2e-22
ref|XP_480992.1| unknown protein [Oryza sativa (japonica cultiva... 100 2e-20
dbj|BAD27996.1| hypothetical protein [Oryza sativa (japonica cul... 93 3e-18
ref|NP_850650.1| expressed protein [Arabidopsis thaliana] 70 2e-11
dbj|BAD37803.1| unknown protein [Oryza sativa (japonica cultivar... 57 2e-07
gb|AAP40647.1| fiber protein Fb24 [Gossypium barbadense] 50 2e-05
ref|XP_464420.1| unknown protein [Oryza sativa (japonica cultiva... 48 1e-04
gb|AAS74311.1| 5-HT1A [Drosophila melanogaster] 40 0.027
gb|AAS74327.1| 5-HT1A [Drosophila melanogaster] gi|45647381|gb|A... 40 0.035
gb|AAH77869.1| MGC80612 protein [Xenopus laevis] 39 0.046
gb|AAS74261.1| 5-HT1A [Drosophila melanogaster] 39 0.061
ref|NP_765804.1| streptococcal hemagglutinin protein [Staphyloco... 39 0.061
gb|AAS74188.1| 5-HT1A [Drosophila melanogaster] 39 0.079
>dbj|BAB09586.1| unnamed protein product [Arabidopsis thaliana]
gi|30696912|ref|NP_680451.2| expressed protein
[Arabidopsis thaliana] gi|48310340|gb|AAT41801.1|
At5g57685 [Arabidopsis thaliana]
gi|46931212|gb|AAT06410.1| At5g57685 [Arabidopsis
thaliana]
Length = 148
Score = 134 bits (336), Expect = 1e-30
Identities = 77/144 (53%), Positives = 88/144 (60%), Gaps = 24/144 (16%)
Query: 21 PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEG--NGESERDLEAGERNN 78
PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYW+LSGYL+G N ERDLE G+
Sbjct: 24 PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGYLDGEENQSRERDLEVGDVKP 83
Query: 79 D-TDQKP--YEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKD 135
D T KP EK LVIMAG KPT+LATPS+ TCTC+ D D
Sbjct: 84 DKTAVKPVALPEKFLVIMAGNVKPTYLATPSV------------------KTCTCDDDDD 125
Query: 136 QKSIENMNDEESTVKQGGGGGENH 159
+ + ++ + GE H
Sbjct: 126 EDD-DVEGSDQVVPRSSESNGETH 148
>ref|XP_482671.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|42409456|dbj|BAD09813.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 180
Score = 129 bits (325), Expect = 3e-29
Identities = 79/159 (49%), Positives = 98/159 (60%), Gaps = 19/159 (11%)
Query: 14 APISS--QVPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEG-----NGE 66
AP+++ HS WHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEG G
Sbjct: 21 APVAAGGAAAHSAWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGGAGGRGGN 80
Query: 67 SERDLEAGERNNDTDQKP---YEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGD 123
+ A + P +EEKILVIMAG KPT+LATP +SR+SSFGD
Sbjct: 81 DDGGAPADGAKPAASELPPPIWEEKILVIMAGDVKPTYLATP--------MSSRASSFGD 132
Query: 124 NTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRR 162
+S+ + D ++K ++ + S VK G G + +R
Sbjct: 133 RSSSNGDQADDEKKKVQEV-AMGSLVKDGENGEHSESQR 170
>dbj|BAD37548.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 184
Score = 119 bits (297), Expect = 5e-26
Identities = 64/134 (47%), Positives = 82/134 (60%), Gaps = 17/134 (12%)
Query: 22 HSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLE---GNGESERDLEAGERNN 78
HSPW SPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYL+ GNG++ AGE
Sbjct: 24 HSPWQSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLDGGSGNGQASGSAAAGEGAE 83
Query: 79 DTDQKP---------YEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCT 129
+ E ++VIMAG ++PTFLA P+ S + + S+C
Sbjct: 84 GEKGSAAGAARPALGFREHVVVIMAGDERPTFLAMPATSRPAVELGAAPVA-----SSCG 138
Query: 130 CEHDKDQKSIENMN 143
C H +++K +E ++
Sbjct: 139 CSHSEEEKKVEEVS 152
>emb|CAB81386.1| hypothetical protein [Arabidopsis thaliana]
gi|4539294|emb|CAB39597.1| hypothetical protein
[Arabidopsis thaliana] gi|18416614|ref|NP_567728.1|
expressed protein [Arabidopsis thaliana]
gi|7485484|pir||T04230 hypothetical protein F14M19.40 -
Arabidopsis thaliana
Length = 129
Score = 117 bits (293), Expect = 1e-25
Identities = 70/140 (50%), Positives = 88/140 (62%), Gaps = 32/140 (22%)
Query: 4 YREPMNVSERAPISSQVPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEG 63
Y++ +N S S VPHSPWHSPVPYLFGGLAAML LI ALLILACSYW+LS
Sbjct: 11 YQDSINASS----SMVVPHSPWHSPVPYLFGGLAAMLALICVALLILACSYWRLS----- 61
Query: 64 NGESERDLEAGE---RNNDTDQKPY---EEKILVIMAGQDKPTFLATPSMSSSTSTSTSR 117
G +ERDLEAG+ +NDT++ + EK LVIMAG +PT+LATP+ S S
Sbjct: 62 -GSAERDLEAGDDAKPDNDTNKTKHTEMPEKFLVIMAGDVRPTYLATPATRSEQS----- 115
Query: 118 SSSFGDNTSTCTC-EHDKDQ 136
CTC +H++++
Sbjct: 116 ----------CTCGDHNEEE 125
>gb|AAM63423.1| unknown [Arabidopsis thaliana]
Length = 129
Score = 117 bits (293), Expect = 1e-25
Identities = 70/140 (50%), Positives = 88/140 (62%), Gaps = 32/140 (22%)
Query: 4 YREPMNVSERAPISSQVPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEG 63
Y++ +N S S VPHSPWHSPVPYLFGGLAAML LI ALLILACSYW+LS
Sbjct: 11 YQDSINASS----SMVVPHSPWHSPVPYLFGGLAAMLALICVALLILACSYWRLS----- 61
Query: 64 NGESERDLEAGE---RNNDTDQKPY---EEKILVIMAGQDKPTFLATPSMSSSTSTSTSR 117
G +ERDLEAG+ +NDT++ + EK LVIMAG +PT+LATP+ S S
Sbjct: 62 -GSAERDLEAGDDAKPDNDTNKTKHTEMPEKFLVIMAGDIRPTYLATPATRSEQS----- 115
Query: 118 SSSFGDNTSTCTC-EHDKDQ 136
CTC +H++++
Sbjct: 116 ----------CTCGDHNEEE 125
>emb|CAB79891.1| hypothetical protein [Arabidopsis thaliana]
gi|3281855|emb|CAA19750.1| hypothetical protein
[Arabidopsis thaliana] gi|15236062|ref|NP_194901.1|
expressed protein [Arabidopsis thaliana]
gi|45773842|gb|AAS76725.1| At4g31730 [Arabidopsis
thaliana] gi|44021855|gb|AAS46626.1| At4g31730
[Arabidopsis thaliana] gi|7486333|pir||T05097
hypothetical protein F28M20.80 - Arabidopsis thaliana
Length = 158
Score = 115 bits (289), Expect = 4e-25
Identities = 65/134 (48%), Positives = 78/134 (57%), Gaps = 9/134 (6%)
Query: 21 PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGESERDLEAGERNNDT 80
P SPWHSPVPYLFGGLAAMLGLIAFALLILACSYW+LS E +G++ + + +
Sbjct: 26 PQSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSSGEEDGQNVDEEKESRSGDKA 85
Query: 81 DQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIE 140
YEEK LVIMAG+D P +LATP+M T G + + K E
Sbjct: 86 ANGAYEEKFLVIMAGEDLPRYLATPAMKKCTCG--------GHEGKMVISQEESVAKEEE 137
Query: 141 NMND-EESTVKQGG 153
M + EE VK G
Sbjct: 138 KMREGEEEKVKDTG 151
>ref|NP_197874.1| expressed protein [Arabidopsis thaliana]
Length = 147
Score = 109 bits (272), Expect = 4e-23
Identities = 61/117 (52%), Positives = 76/117 (64%), Gaps = 9/117 (7%)
Query: 23 SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGESERDLEAGERNNDTDQ 82
SPW +PVPYLFGGLAAMLGLIAFALL+LACSYW+LS E + E+ E+GE+
Sbjct: 8 SPWRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQTE---DEEKQTESGEK---VVA 61
Query: 83 KPYEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSI 139
K +EEKILVIMAGQ+ PTFLATP + + G N + +H K ++ I
Sbjct: 62 KAFEEKILVIMAGQNNPTFLATPVAAKICLDCVNMEKKEGQNGES---KHSKLEEHI 115
>gb|AAM15477.1| Expressed protein [Arabidopsis thaliana]
gi|18400628|ref|NP_565577.1| expressed protein
[Arabidopsis thaliana]
Length = 156
Score = 107 bits (266), Expect = 2e-22
Identities = 62/131 (47%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 21 PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGESERDLEAGERNNDT 80
P SPWHSPVPYLFGGLAAMLGLIAFALLILACSYW+LS + +GE + +
Sbjct: 29 PISPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSTSGDDSGERVDEEKESRSGVKA 88
Query: 81 DQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIE 140
EEK+LVIMAG D P FLATP+ + R F ++ E D+ E
Sbjct: 89 ASAACEEKVLVIMAGDDLPRFLATPAANKCMCGHEGRMVIFKEDGIGAGEEKMGDR---E 145
Query: 141 NMNDEESTVKQ 151
+ E T Q
Sbjct: 146 KAKENEETTSQ 156
>ref|XP_480992.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|40253910|dbj|BAD05843.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|40253746|dbj|BAD05686.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 165
Score = 100 bits (249), Expect = 2e-20
Identities = 59/120 (49%), Positives = 69/120 (57%), Gaps = 16/120 (13%)
Query: 15 PISSQVPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGESERDLEAG 74
P S + SPWHSPVPYLFGGLAAMLGLI ALLILACSYWKL+ YL G G S A
Sbjct: 9 PPSPAMAVSPWHSPVPYLFGGLAAMLGLITLALLILACSYWKLNSYL-GTGHSSSAAAAA 67
Query: 75 ERNNDTD-----QKP----------YEEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSS 119
+ D + P Y + + V+MAG+ PTFLA P + ST TS S+
Sbjct: 68 AAGDGGDGDGGSKSPATAVAAFPVVYGDLVAVVMAGERMPTFLAAPIVRRPPSTDTSSSA 127
>dbj|BAD27996.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50252063|dbj|BAD27994.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 207
Score = 93.2 bits (230), Expect = 3e-18
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 19/118 (16%)
Query: 7 PMNVSERAPISSQVPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGE 66
P + + A +S SPW SPVPYLFGGLAAMLGLIA +LL LACSYWKL+ G G
Sbjct: 25 PSSSAVVASTASVAARSPWQSPVPYLFGGLAAMLGLIALSLLALACSYWKLAAAGGGGGG 84
Query: 67 SERDLEAGERNNDTD----------------QKPYEEKILVIMAGQDKPTFLATPSMS 108
+ + GE + D + + + ++VIMAG ++PTFLATP+ S
Sbjct: 85 GQ---DGGEESRDGGGGGGGEKGSGGGGGGLAREWRDHVVVIMAGDERPTFLATPASS 139
>ref|NP_850650.1| expressed protein [Arabidopsis thaliana]
Length = 111
Score = 70.1 bits (170), Expect = 2e-11
Identities = 38/81 (46%), Positives = 50/81 (60%), Gaps = 1/81 (1%)
Query: 25 WHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGESERDLEAGERNNDTDQKP 84
W SPVPYLFGGL ++ LIA ALL L C++ K S N E D + G+++ +
Sbjct: 10 WKSPVPYLFGGLFLLVLLIALALLSLVCTHQKPSSSSNNNHMDEED-DVGDKDAKPITRE 68
Query: 85 YEEKILVIMAGQDKPTFLATP 105
Y KI+VI+AG +KPT LA P
Sbjct: 69 YLPKIVVILAGDNKPTCLAVP 89
>dbj|BAD37803.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 128
Score = 57.4 bits (137), Expect = 2e-07
Identities = 34/86 (39%), Positives = 45/86 (51%), Gaps = 6/86 (6%)
Query: 25 WHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGESERDLEAGERNNDTDQKP 84
W +P PYLF G A M+GLIA ALL+L C+ K +G++ A
Sbjct: 34 WRTPTPYLFLGFAVMMGLIAVALLVLVCTRRK------NHGDAGSSASAAASVKVLVPLD 87
Query: 85 YEEKILVIMAGQDKPTFLATPSMSSS 110
E K++VIMAG P+FLA+ SS
Sbjct: 88 REPKVVVIMAGDTAPSFLASAKPLSS 113
>gb|AAP40647.1| fiber protein Fb24 [Gossypium barbadense]
Length = 72
Score = 50.4 bits (119), Expect = 2e-05
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
Query: 86 EEKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDE 145
E+K LVIMAG+ KPTFLATP S+SRSSSFGD T C + +K ++ + + E
Sbjct: 6 EQKFLVIMAGEVKPTFLATP-------ISSSRSSSFGDKTCCCGEKGEKLEEETTSGDAE 58
Query: 146 E 146
+
Sbjct: 59 D 59
>ref|XP_464420.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|50726406|dbj|BAD34017.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 140
Score = 48.1 bits (113), Expect = 1e-04
Identities = 35/104 (33%), Positives = 49/104 (46%), Gaps = 14/104 (13%)
Query: 14 APISSQVPHSP--------WHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNG 65
A +S VP P W +P PYLF G ++ LIA AL +L C+ K G G G
Sbjct: 10 AASTSSVPAMPAAVAPPPFWSTPTPYLFIGFGVVMALIAVALAVLLCTRRKDGGRGVG-G 68
Query: 66 ESERDLEA-----GERNNDTDQKPYEEKILVIMAGQDKPTFLAT 104
E D+ R + +++V+MAG D P+FLA+
Sbjct: 69 EERGDVVVPPGMMSVRVLAPLDREAPPRVVVVMAGDDSPSFLAS 112
>gb|AAS74311.1| 5-HT1A [Drosophila melanogaster]
Length = 322
Score = 40.0 bits (92), Expect = 0.027
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 56 KLSGYLEGNGESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTST 115
K S + G S R + G+R +Q+ EE + QD+ + +T+T
Sbjct: 28 KSSAXVNGMAPSGRQEDDGQRPEHGEQEDREE-----LVDQDE-------QVGPQPTTAT 75
Query: 116 SRSSSFGDNTSTCTC--------EHDKDQKSIENMNDEESTVKQGGGGGENHVRRTE--- 164
S +++ G N S C E + Q+ +E + + +VK GGGGG + T
Sbjct: 76 SATTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTITS 135
Query: 165 -SVETPTTDTS 174
SV +P T TS
Sbjct: 136 ISVLSPQTPTS 146
>gb|AAS74327.1| 5-HT1A [Drosophila melanogaster] gi|45647381|gb|AAS74288.1| 5-HT1A
[Drosophila melanogaster] gi|45647373|gb|AAS74284.1|
5-HT1A [Drosophila melanogaster]
gi|45647367|gb|AAS74281.1| 5-HT1A [Drosophila
melanogaster] gi|45647337|gb|AAS74266.1| 5-HT1A
[Drosophila melanogaster] gi|45647191|gb|AAS74193.1|
5-HT1A [Drosophila melanogaster]
Length = 322
Score = 39.7 bits (91), Expect = 0.035
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 56 KLSGYLEGNGESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTST 115
K S + G S R + G+R +Q+ EE + QD+ + +T+T
Sbjct: 28 KSSAAVNGMAPSGRQEDDGQRPEHGEQEDREE-----LVDQDE-------QVGPQPTTAT 75
Query: 116 SRSSSFGDNTSTCTC--------EHDKDQKSIENMNDEESTVKQGGGGGENHVRRTE--- 164
S +++ G N S C E + Q+ +E + + +VK GGGGG + T
Sbjct: 76 SATTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTITS 135
Query: 165 -SVETPTTDTS 174
SV +P T TS
Sbjct: 136 ISVLSPQTPTS 146
>gb|AAH77869.1| MGC80612 protein [Xenopus laevis]
Length = 728
Score = 39.3 bits (90), Expect = 0.046
Identities = 20/69 (28%), Positives = 31/69 (43%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
+ SSST TST+ SS + +TCT E+ +D K I + + + G V
Sbjct: 256 NQSSSTPTSTTSSSPIPPSPATCTTENSEDDKKIRGRSTDSEVSQSPAKNGSKSVHNNHH 315
Query: 166 VETPTTDTS 174
++P S
Sbjct: 316 PQSPAVTPS 324
>gb|AAS74261.1| 5-HT1A [Drosophila melanogaster]
Length = 322
Score = 38.9 bits (89), Expect = 0.061
Identities = 41/151 (27%), Positives = 65/151 (42%), Gaps = 25/151 (16%)
Query: 36 LAAMLGLIAFALLILACSYWKLSGYLEGNGESERDLEAGERNNDTDQKPYEEKILVIMAG 95
+A + L+A A L S K S + G S R + G+R +Q+ EE +
Sbjct: 9 IATVSHLVALAKL-QGKSTAKSSAAVNGMAPSGRQEDDGQRPEHGEQEDREE-----LVD 62
Query: 96 QDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTC--------EHDKDQKSIENMNDEES 147
QD+ + +T+TS +++ G N S C E + Q+ +E + +
Sbjct: 63 QDE-------QVGPQPTTATSATTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQK 115
Query: 148 TVKQGGGGGENHVRRTE----SVETPTTDTS 174
+VK GGGGG + T S +P T TS
Sbjct: 116 SVKSGGGGGASTSNATTITSISALSPQTPTS 146
>ref|NP_765804.1| streptococcal hemagglutinin protein [Staphylococcus epidermidis ATCC
12228] gi|27316716|gb|AAO05891.1| streptococcal
hemagglutinin protein [Staphylococcus epidermidis ATCC
12228]
Length = 2310
Score = 38.9 bits (89), Expect = 0.061
Identities = 22/69 (31%), Positives = 36/69 (51%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TST T E S+ + N +++ + ++ T +
Sbjct: 1955 SNSASTSLSESSSTSVSDSTSTSTSESASTSTSVSDSNSTSTSLSESTSTSLSNSTSTST 2014
Query: 166 VETPTTDTS 174
E+ +T TS
Sbjct: 2015 SESASTSTS 2023
Score = 38.5 bits (88), Expect = 0.079
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TST T + S+ + N +++ + + T +
Sbjct: 1919 SNSTSTSLSESTSTSLSDSTSTSTSDSASTSTSVSDSNSASTSLSESSSTSVSDSTSTST 1978
Query: 166 VETPTTDTS 174
E+ +T TS
Sbjct: 1979 SESASTSTS 1987
Score = 37.7 bits (86), Expect = 0.13
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TST T + S+ + N +++ + + T +
Sbjct: 1657 SNSASTSLSDSTSTSISDSTSTSTSDSASTSTSVSDSNSASTSLSESTSTSVSDSTSTST 1716
Query: 166 VETPTTDTS 174
E+ +T TS
Sbjct: 1717 SESASTSTS 1725
Score = 35.8 bits (81), Expect = 0.51
Identities = 20/69 (28%), Positives = 35/69 (49%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TST T + S+ + N +++ + + T +
Sbjct: 1227 SNSASTSLSESTSTSVSDSTSTSTSDSASTSTSVSDSNSASTSLSESTSTSISDSTSTST 1286
Query: 166 VETPTTDTS 174
++ +T TS
Sbjct: 1287 SDSASTSTS 1295
Score = 35.8 bits (81), Expect = 0.51
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TST T + S+ + +++ + ++ + +
Sbjct: 1263 SNSASTSLSESTSTSISDSTSTSTSDSASTSTSVSESSSTSTSISESLSTSDSDSKSMST 1322
Query: 166 VETPTTDTS 174
E+ +T TS
Sbjct: 1323 SESASTSTS 1331
Score = 35.4 bits (80), Expect = 0.67
Identities = 19/69 (27%), Positives = 36/69 (51%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S ++TST T + S+ + N +++++ + T +
Sbjct: 1047 SNSTSTSLSESTSTSLSESTSTSTSDSASTSASVSDSNSASTSLRESTSTSLSDSTSTST 1106
Query: 166 VETPTTDTS 174
++ +T TS
Sbjct: 1107 SDSASTSTS 1115
Score = 35.0 bits (79), Expect = 0.87
Identities = 20/69 (28%), Positives = 34/69 (48%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S ++TST T + S+ + N ++ + + T +
Sbjct: 1155 SNSTSTSLSESTSTSLSESTSTSTSDSASTSMSVSDSNSASISLSESTSTSVSDSTSTST 1214
Query: 166 VETPTTDTS 174
E+ +T TS
Sbjct: 1215 SESASTSTS 1223
Score = 33.9 bits (76), Expect = 1.9
Identities = 22/69 (31%), Positives = 34/69 (48%), Gaps = 5/69 (7%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TS T E SI + N +++ + +ES
Sbjct: 1119 SDSASTSLSGSSSTSVSDSTSASTSESASTSTSISDSNSTSTSLSE-----STSTSLSES 1173
Query: 166 VETPTTDTS 174
T T+D++
Sbjct: 1174 TSTSTSDSA 1182
Score = 33.9 bits (76), Expect = 1.9
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S ++TST T E S+ + N +++ G ++S
Sbjct: 1991 SNSTSTSLSESTSTSLSNSTSTSTSESASTSTSVSDSNSASTSL-----SGSLSTNVSDS 2045
Query: 166 VETPTTDTS 174
T T+D++
Sbjct: 2046 TSTSTSDSA 2054
Score = 33.5 bits (75), Expect = 2.5
Identities = 21/69 (30%), Positives = 32/69 (45%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TS T E S N E +++ + RT +
Sbjct: 1585 SNSASTSMSESLSTSVSDSTSMSTSESASTSTSESESNSESTSLSDSTSTSVSDSTRTST 1644
Query: 166 VETPTTDTS 174
++ +T S
Sbjct: 1645 SDSASTSMS 1653
Score = 33.5 bits (75), Expect = 2.5
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 78 NDTDQKPYE--EKILVIMAGQDKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKD 135
+D+D K E + D + + S S+STS S S S+S D+TS T E D +
Sbjct: 1313 SDSDSKSMSTSESASTSTSVSDSESASTSISESTSTSLSDSTSTSTSDSTSASTSESDSN 1372
Query: 136 QKSIE-------NMNDEESTVKQGGGGGENHVRRTESVETPTTDTS 174
S +++D ST V + S T +D++
Sbjct: 1373 STSTSMSESLSTSVSDSTSTSTSDSASTSTSVSDSNSASTSLSDST 1418
Score = 33.5 bits (75), Expect = 2.5
Identities = 20/69 (28%), Positives = 34/69 (48%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TST T + S + N +++ + + T +
Sbjct: 1335 SESASTSISESTSTSLSDSTSTSTSDSTSASTSESDSNSTSTSMSESLSTSVSDSTSTST 1394
Query: 166 VETPTTDTS 174
++ +T TS
Sbjct: 1395 SDSASTSTS 1403
Score = 33.5 bits (75), Expect = 2.5
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S+STS S S S+S D+TST T + S + N +++ + T +
Sbjct: 1473 SNSTSTSLSESISTSLSDSTSTSTSDSASTSASESDSNSASTSLSDSTSTSISDSTSTST 1532
Query: 166 VETPTTDTS 174
E+ +T TS
Sbjct: 1533 SESASTSTS 1541
Score = 33.1 bits (74), Expect = 3.3
Identities = 20/67 (29%), Positives = 29/67 (42%)
Query: 108 SSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTESVE 167
S+STS S S S+S D+ ST T E D D S ++V + T +
Sbjct: 1093 STSTSLSDSTSTSTSDSASTSTSESDSDSASTSLSGSSSTSVSDSTSASTSESASTSTSI 1152
Query: 168 TPTTDTS 174
+ + TS
Sbjct: 1153 SDSNSTS 1159
Score = 33.1 bits (74), Expect = 3.3
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 57 LSGYLEGNGESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTSTS 116
LSG L + + + + + V + + + + S S+STS S S
Sbjct: 2070 LSGSLSTSISDSTSTSTSDSASTSTSESASTSTSVSESDSESTSMSVSDSNSTSTSLSDS 2129
Query: 117 RSSSFGDNTSTCTCEHDKDQKSIENMNDEESTV 149
S+S D+T T T + KS+ N ++V
Sbjct: 2130 TSTSVSDSTRTSTSDSASTSKSVSESNSASTSV 2162
Score = 32.3 bits (72), Expect = 5.7
Identities = 25/81 (30%), Positives = 37/81 (44%), Gaps = 9/81 (11%)
Query: 103 ATPSMSSSTSTSTSRSSSFG--DNTSTCTCEHDKDQKSIE-------NMNDEESTVKQGG 153
A+ S+S STSTS S S+S D+TST T E D + S +++D ST
Sbjct: 1440 ASTSLSESTSTSLSDSTSVSTSDSTSTSTSESDSNSTSTSLSESISTSLSDSTSTSTSDS 1499
Query: 154 GGGENHVRRTESVETPTTDTS 174
+ S T +D++
Sbjct: 1500 ASTSASESDSNSASTSLSDST 1520
Score = 31.6 bits (70), Expect = 9.7
Identities = 21/78 (26%), Positives = 36/78 (45%), Gaps = 5/78 (6%)
Query: 97 DKPTFLATPSMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGG 156
D + + S S+STS S S S+S +TST T E S+ + N +++ +
Sbjct: 1746 DSASASTSESNSTSTSLSGSTSTSLSGSTSTSTSESASTSTSVSDSNSASTSLSE----- 1800
Query: 157 ENHVRRTESVETPTTDTS 174
+ S T T+D++
Sbjct: 1801 STSTSLSGSTSTSTSDSA 1818
Score = 31.6 bits (70), Expect = 9.7
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S STS S S S+S D+T T T + S+ N +++ + T +
Sbjct: 1621 SNSESTSLSDSTSTSVSDSTRTSTSDSASTSMSVSYSNSASTSLSDSTSTSISDSTSTST 1680
Query: 166 VETPTTDTS 174
++ +T TS
Sbjct: 1681 SDSASTSTS 1689
Score = 31.6 bits (70), Expect = 9.7
Identities = 20/69 (28%), Positives = 33/69 (46%), Gaps = 5/69 (7%)
Query: 106 SMSSSTSTSTSRSSSFGDNTSTCTCEHDKDQKSIENMNDEESTVKQGGGGGENHVRRTES 165
S S STS S S S+S ++TST T + S + N +++ + +ES
Sbjct: 1011 STSESTSLSDSTSASLSESTSTSTSDSASTSTSESDSNSTSTSLSE-----STSTSLSES 1065
Query: 166 VETPTTDTS 174
T T+D++
Sbjct: 1066 TSTSTSDSA 1074
>gb|AAS74188.1| 5-HT1A [Drosophila melanogaster]
Length = 324
Score = 38.5 bits (88), Expect = 0.079
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 56 KLSGYLEGNGESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLATPSMSSSTSTST 115
K S + G S R + G+R +Q+ EE + QD+ + +T+T
Sbjct: 28 KSSAAVNGMAPSGRQEDDGQRPEHGEQEDREE-----LVDQDE-------QVGPQPTTAT 75
Query: 116 SRSSSFGDNTSTCTC--------EHDKDQKSIENMNDEESTVKQGGGGGENHVRRTE--- 164
S +++ G N S C E + Q+ +E + + +VK GGGGG + T
Sbjct: 76 SATTAAGTNESEDXCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTITS 135
Query: 165 -SVETPTTDTS 174
S +P T TS
Sbjct: 136 ISALSPQTPTS 146
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.308 0.126 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 310,915,992
Number of Sequences: 2540612
Number of extensions: 12664017
Number of successful extensions: 75529
Number of sequences better than 10.0: 418
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 72442
Number of HSP's gapped (non-prelim): 1709
length of query: 174
length of database: 863,360,394
effective HSP length: 119
effective length of query: 55
effective length of database: 561,027,566
effective search space: 30856516130
effective search space used: 30856516130
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 70 (31.6 bits)
Medicago: description of AC136954.11