BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136841.8 + phase: 0 /pseudo
(119 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680299.1| hAT dimerisation domain-containing protein [Ara... 71 7e-12
dbj|BAD54046.1| hAT dimerisation domain-containing protein-like ... 68 5e-11
dbj|BAB02513.1| transposase-like protein [Arabidopsis thaliana] ... 58 6e-08
dbj|BAB02921.1| unnamed protein product [Arabidopsis thaliana] 55 3e-07
ref|NP_188371.1| hAT dimerisation domain-containing protein [Ara... 55 3e-07
ref|NP_913405.1| unnamed protein product [Oryza sativa (japonica... 51 6e-06
dbj|BAD81298.1| hAT dimerisation domain-containing protein -like... 51 6e-06
ref|XP_476234.1| unknown protein [Oryza sativa (japonica cultiva... 50 1e-05
dbj|BAB02511.1| transposase-like protein [Arabidopsis thaliana] ... 50 2e-05
dbj|BAB02512.1| transposase-like protein [Arabidopsis thaliana] ... 49 4e-05
gb|AAR96007.1| transposase-like protein [Musa acuminata] 49 4e-05
ref|NP_918787.1| B1096D03.1 [Oryza sativa (japonica cultivar-gro... 48 6e-05
ref|NP_910050.1| hypothetical protein [Oryza sativa (japonica cu... 47 8e-05
gb|AAM98154.1| putative protein [Arabidopsis thaliana] 45 3e-04
dbj|BAB03069.1| transposase-like protein [Arabidopsis thaliana] ... 45 3e-04
gb|AAF68117.1| F20B17.17 [Arabidopsis thaliana] gi|15219979|ref|... 43 0.002
gb|AAC25101.1| putative transposase [Arabidopsis thaliana] gi|25... 40 0.010
gb|AAP54921.1| hypothetical protein [Oryza sativa (japonica cult... 40 0.013
dbj|BAD68478.1| hAT dimerisation domain-containing protein-like ... 37 0.11
emb|CAE74648.1| Hypothetical protein CBG22445 [Caenorhabditis br... 31 6.1
>ref|NP_680299.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana]
Length = 485
Score = 70.9 bits (172), Expect = 7e-12
Identities = 42/97 (43%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDI---EGKGGLHDCITRMVADPEERAKIEIQLDDFD 61
LH PLHAAGY+LNP+FH +G DDI E GG C+ R+V E + KI +LD F
Sbjct: 137 LHRPLHAAGYYLNPEFH--YGQPDDIGYEEVLGGFLGCLGRLVPKIETQDKIITELDAFK 194
Query: 62 KWANDMGYSVAAGNEV---PSVWWSPFGKGLPELQKF 95
K G +A P+ WWS +G P LQ F
Sbjct: 195 KATGLFGIPMAIRLRTKMSPAEWWSAYGSSTPNLQNF 231
>dbj|BAD54046.1| hAT dimerisation domain-containing protein-like [Oryza sativa
(japonica cultivar-group)]
Length = 657
Score = 68.2 bits (165), Expect = 5e-11
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH P+HAAGY LNP+ + F D E K G + C+TR+ + + K+ IQ+D + + +
Sbjct: 477 LHTPVHAAGYILNPRIFYTERFSYDTEIKSGTNACVTRLAKNHYDPKKVAIQMDRYRRKS 536
Query: 65 N--DMGYSVAAGNEVPSV-WWSPFGKGLPELQKF 95
D ++ E+P V WWS G PELQ F
Sbjct: 537 APFDSDSAIQQTMEIPQVRWWSAHGTDTPELQTF 570
>dbj|BAB02513.1| transposase-like protein [Arabidopsis thaliana]
gi|28827476|gb|AAO50582.1| unknown protein [Arabidopsis
thaliana] gi|28393338|gb|AAO42094.1| unknown protein
[Arabidopsis thaliana] gi|15230674|ref|NP_187909.1| hAT
dimerisation domain-containing protein [Arabidopsis
thaliana]
Length = 544
Score = 57.8 bits (138), Expect = 6e-08
Identities = 35/93 (37%), Positives = 46/93 (48%), Gaps = 5/93 (5%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLHAAGYFLNP S F DIE GL + MV D + KI Q+D + +
Sbjct: 384 LHNPLHAAGYFLNPTAFYSTNFHLDIEVVTGLISSLIHMVEDCHVQFKISTQIDMY-RLG 442
Query: 65 NDMGYSVAAGNEV----PSVWWSPFGKGLPELQ 93
D + +++ P+ WW+ PELQ
Sbjct: 443 KDCFNEASQADQITGISPAEWWAHKASQYPELQ 475
>dbj|BAB02921.1| unnamed protein product [Arabidopsis thaliana]
Length = 883
Score = 55.5 bits (132), Expect = 3e-07
Identities = 30/92 (32%), Positives = 41/92 (43%), Gaps = 3/92 (3%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWAN 65
H PL+ A YF NP + F E G+++CI R+ D R +Q+ D+
Sbjct: 646 HHPLYVAAYFFNPAYKYRPDFMAQSEVVRGVNECIVRLEPDNTRRITALMQIPDYTCAKA 705
Query: 66 DMGYSVAAGNEV---PSVWWSPFGKGLPELQK 94
D G +A G PS WW G ELQ+
Sbjct: 706 DFGTDIAIGTRTELDPSAWWQQHGISCLELQR 737
>ref|NP_188371.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana]
Length = 877
Score = 55.5 bits (132), Expect = 3e-07
Identities = 30/92 (32%), Positives = 41/92 (43%), Gaps = 3/92 (3%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWAN 65
H PL+ A YF NP + F E G+++CI R+ D R +Q+ D+
Sbjct: 646 HHPLYVAAYFFNPAYKYRPDFMAQSEVVRGVNECIVRLEPDNTRRITALMQIPDYTCAKA 705
Query: 66 DMGYSVAAGNEV---PSVWWSPFGKGLPELQK 94
D G +A G PS WW G ELQ+
Sbjct: 706 DFGTDIAIGTRTELDPSAWWQQHGISCLELQR 737
>ref|NP_913405.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 521
Score = 51.2 bits (121), Expect = 6e-06
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLH+A FLNP + + K + + +++ P++R I ++L F K
Sbjct: 311 LHSPLHSAAAFLNPSIQYNPEVKFFTSIKEEFYHVLDKVLTVPDQRQGITVELHAFRKAQ 370
Query: 65 NDMGYSVAA---GNEVPSVWWSPFGKGLPELQ 93
G ++A N P +WW +G P LQ
Sbjct: 371 GMFGSNIAKEARNNTSPGMWWEQYGDSAPSLQ 402
>dbj|BAD81298.1| hAT dimerisation domain-containing protein -like [Oryza sativa
(japonica cultivar-group)]
Length = 679
Score = 51.2 bits (121), Expect = 6e-06
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLH+A FLNP + + K + + +++ P++R I ++L F K
Sbjct: 469 LHSPLHSAAAFLNPSIQYNPEVKFFTSIKEEFYHVLDKVLTVPDQRQGITVELHAFRKAQ 528
Query: 65 NDMGYSVAA---GNEVPSVWWSPFGKGLPELQ 93
G ++A N P +WW +G P LQ
Sbjct: 529 GMFGSNIAKEARNNTSPGMWWEQYGDSAPSLQ 560
>ref|XP_476234.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|46485870|gb|AAS98495.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 1005
Score = 50.4 bits (119), Expect = 1e-05
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 11/104 (10%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKG----GLHDCITRMVADPEERAKIEIQLDDF 60
+ PLH AGY+LNP ++ + + +IE G G+ CI +++ D + + KI +L+ +
Sbjct: 742 IKAPLHLAGYYLNPYYYFPN--KQEIESDGSFRAGVISCIDKLIDDEDIQDKIIEELNLY 799
Query: 61 DKWANDMGYSVAA-----GNEVPSVWWSPFGKGLPELQKFVSCI 99
G+ +A N P+ WW G P L+K + I
Sbjct: 800 QDQHGSFGHEIAVRQRKNKNFNPAKWWLNHGTSTPNLRKLAARI 843
>dbj|BAB02511.1| transposase-like protein [Arabidopsis thaliana]
gi|15230659|ref|NP_187907.1| hAT dimerisation
domain-containing protein [Arabidopsis thaliana]
Length = 572
Score = 49.7 bits (117), Expect = 2e-05
Identities = 34/91 (37%), Positives = 42/91 (45%), Gaps = 3/91 (3%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWAN 65
H PLHAAGYFLNP + S F GL + +V +P + KI QLD +
Sbjct: 424 HNPLHAAGYFLNPMAYYSDDFHTYQHVYTGLAFSLVHLVKEPHLQVKIGTQLDVYRYGRG 483
Query: 66 DMGYSVAAG--NEV-PSVWWSPFGKGLPELQ 93
+ AG N V P WW+ PELQ
Sbjct: 484 CFMKASQAGQLNGVSPVNWWTQKANQYPELQ 514
>dbj|BAB02512.1| transposase-like protein [Arabidopsis thaliana]
gi|15230660|ref|NP_187908.1| hAT dimerisation
domain-containing protein [Arabidopsis thaliana]
Length = 605
Score = 48.5 bits (114), Expect = 4e-05
Identities = 33/95 (34%), Positives = 44/95 (45%), Gaps = 7/95 (7%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLHAAGY+LNP S F D E GL + + E + KI QLD + +
Sbjct: 458 LHNPLHAAGYYLNPTSFYSTDFHLDPEVSSGLTHSLVHVA--KEGQIKIASQLDRY-RLG 514
Query: 65 NDMGYSVAAGNEV----PSVWWSPFGKGLPELQKF 95
D + +++ P WW+ PELQ F
Sbjct: 515 KDCFNEASQPDQISGISPIDWWTEKASQHPELQSF 549
>gb|AAR96007.1| transposase-like protein [Musa acuminata]
Length = 670
Score = 48.5 bits (114), Expect = 4e-05
Identities = 30/94 (31%), Positives = 43/94 (44%), Gaps = 7/94 (7%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDD--FDKW 63
H LHAA FLNP F+ D+ + G H + +M PEE +IE+ D + K
Sbjct: 481 HSHLHAAAAFLNPSIFYDPSFKFDVNMRNGFHAAMWKMF--PEENDRIELIKDQPVYIKA 538
Query: 64 ANDMGYSVAAGNEV---PSVWWSPFGKGLPELQK 94
+G A P WW+ +G +P LQ+
Sbjct: 539 QGALGSKFAIMGRTLNSPGDWWATYGYEIPVLQR 572
>ref|NP_918787.1| B1096D03.1 [Oryza sativa (japonica cultivar-group)]
Length = 919
Score = 47.8 bits (112), Expect = 6e-05
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 9 LHAAGYFLNPQFHSSHGFRDDIEGKG----GLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH AGY+LNP ++ + + +IE G G+ CI ++V D + + KI +L+ +
Sbjct: 703 LHLAGYYLNPYYYYPN--KQEIESDGSFRAGVISCIDKLVDDEDIQDKIIEELNLYQDQH 760
Query: 65 NDMGYSVAA-----GNEVPSVWWSPFGKGLPELQKFVSCI 99
G+ +A N P+ WW G P L+K + I
Sbjct: 761 GSFGHEIAVRQRKNKNFNPAKWWLNHGTSTPNLRKLAARI 800
>ref|NP_910050.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|27545045|gb|AAO18451.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 779
Score = 47.4 bits (111), Expect = 8e-05
Identities = 29/91 (31%), Positives = 45/91 (48%), Gaps = 4/91 (4%)
Query: 8 PLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDF-DKWAND 66
PLH AG+FLNP F E G+ DC+ R+V+D + + KI+ +L+ + + A D
Sbjct: 552 PLHLAGFFLNPLFFDGVRGGTSSEIFSGMLDCVERLVSDVKIQDKIQKELNVYRSEAAGD 611
Query: 67 MGYSVAAGNE---VPSVWWSPFGKGLPELQK 94
+A P+ WW +G P L +
Sbjct: 612 FRRQMAIRARHTLPPAEWWYTYGGACPNLTR 642
>gb|AAM98154.1| putative protein [Arabidopsis thaliana]
Length = 768
Score = 45.4 bits (106), Expect = 3e-04
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWAN 65
H PL AAG+FLNP+ + E + DCI R+V D + + KI +L +
Sbjct: 533 HIPLLAAGFFLNPKLFYNTNEEMRSELILSVLDCIERLVPDDKIQDKIIKELTSYKTAGG 592
Query: 66 DMGYSV---AAGNEVPSVWWSPFGKGLPELQKF 95
G ++ A +P+ WWS +G+ L +F
Sbjct: 593 VFGRNLAIRARDTMLPAEWWSTYGESCLNLSRF 625
>dbj|BAB03069.1| transposase-like protein [Arabidopsis thaliana]
gi|28827622|gb|AAO50655.1| unknown protein [Arabidopsis
thaliana] gi|28393360|gb|AAO42104.1| unknown protein
[Arabidopsis thaliana] gi|42565113|ref|NP_188861.2| hAT
dimerisation domain-containing protein [Arabidopsis
thaliana]
Length = 761
Score = 45.4 bits (106), Expect = 3e-04
Identities = 30/101 (29%), Positives = 50/101 (48%), Gaps = 17/101 (16%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLH----DCITRMVADPEERAKIEIQLDDF 60
L PL+AAG++LNP+F + D E + +H DCI ++V D + +I + D
Sbjct: 526 LQQPLYAAGFYLNPKFF----YSIDEEMRSEIHLAVVDCIEKLVPDVNIQ---DIVIKDI 578
Query: 61 DKWANDMGY------SVAAGNEVPSVWWSPFGKGLPELQKF 95
+ + N +G A +P+ WWS +G+ L +F
Sbjct: 579 NSYKNAVGIFGRNLAIRARDTMLPAEWWSTYGESCLNLSRF 619
>gb|AAF68117.1| F20B17.17 [Arabidopsis thaliana] gi|15219979|ref|NP_178092.1| hAT
dimerisation domain-containing protein [Arabidopsis
thaliana] gi|12324578|gb|AAG52239.1| hypothetical
protein; 97951-99813 [Arabidopsis thaliana]
gi|25406602|pir||D96828 hypothetical protein F19K16.28
[imported] - Arabidopsis thaliana
Length = 518
Score = 42.7 bits (99), Expect = 0.002
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLHAA FLNP + + K + +++ + R I Q+ F +
Sbjct: 309 LHSPLHAAAAFLNPSIQYNPEIKFLTSLKEDFFKVLEKLLPTSDLRRDITNQIFTFTRAK 368
Query: 65 NDMGYSVA--AGNEV-PSVWWSPFGKGLPELQK 94
G ++A A + V P +WW FG P LQ+
Sbjct: 369 GMFGCNLAMEARDSVSPGLWWEQFGDSAPVLQR 401
>gb|AAC25101.1| putative transposase [Arabidopsis thaliana] gi|25456264|pir||T52187
probable transposase [imported] - Arabidopsis thaliana
Length = 729
Score = 40.4 bits (93), Expect = 0.010
Identities = 27/95 (28%), Positives = 44/95 (45%), Gaps = 4/95 (4%)
Query: 3 RTLHGPLHAAGYFLNPQF-HSSHGFRDDIEGKGGLHDCITRMVADPEER--AKIEIQLDD 59
R L LHAA Y+LNP F + F + E GL + + D + + ++ + +
Sbjct: 503 RMLRHDLHAAAYYLNPAFMYDQPTFCEKPEVMSGLMNLFEKQKNDSKTKLFQELRVYRER 562
Query: 60 FDKWANDMGYSVAAGNEVPSVWWSPFGKGLPELQK 94
++ DM + + ++ P WW FG P LQK
Sbjct: 563 EGSFSLDMALTCSKTSQ-PDEWWRYFGHDAPNLQK 596
>gb|AAP54921.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37536664|ref|NP_922634.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|13876519|gb|AAK43495.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 645
Score = 40.0 bits (92), Expect = 0.013
Identities = 23/72 (31%), Positives = 39/72 (53%), Gaps = 6/72 (8%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKG----GLHDCITRMVADPEERAKIEIQLDDF 60
L PLH AGY+LNP ++ + + +IE G G+ CI ++V D + + KI +L+ +
Sbjct: 438 LKTPLHLAGYYLNPYYYYPN--KQEIESDGSFRAGVISCIDKLVDDEDIQDKIIEELNLY 495
Query: 61 DKWANDMGYSVA 72
G+ +A
Sbjct: 496 QDQHGSFGHEIA 507
>dbj|BAD68478.1| hAT dimerisation domain-containing protein-like [Oryza sativa
(japonica cultivar-group)] gi|55297571|dbj|BAD68918.1|
hAT dimerisation domain-containing protein-like [Oryza
sativa (japonica cultivar-group)]
Length = 622
Score = 37.0 bits (84), Expect = 0.11
Identities = 21/68 (30%), Positives = 37/68 (53%), Gaps = 6/68 (8%)
Query: 9 LHAAGYFLNPQFHSSHGFRDDIEGKG----GLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH AGY+LNP ++ + + +IE G G+ CI ++V D + + KI +L+ +
Sbjct: 540 LHLAGYYLNPYYYYPN--KQEIESDGSFRAGVISCIDKLVDDEDIQDKIIEELNLYQDQH 597
Query: 65 NDMGYSVA 72
G+ +A
Sbjct: 598 GSFGHEIA 605
>emb|CAE74648.1| Hypothetical protein CBG22445 [Caenorhabditis briggsae]
Length = 764
Score = 31.2 bits (69), Expect = 6.1
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 15 FLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWANDMGYSVAAG 74
+L+P+F FR DI+ D +++ E KIE Q + K+ + A
Sbjct: 360 WLDPRF----AFRRDIQPVEKWDDVTQKILEGSSEGVKIEFQ-QEIQKYRKLLKSERPAP 414
Query: 75 NEVPSVWWSPFGKGLPEL 92
+E P +WW + LP L
Sbjct: 415 SESPFIWWVLHQERLPNL 432
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.333 0.149 0.525
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 232,375,496
Number of Sequences: 2540612
Number of extensions: 9453049
Number of successful extensions: 21588
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 21563
Number of HSP's gapped (non-prelim): 22
length of query: 119
length of database: 863,360,394
effective HSP length: 95
effective length of query: 24
effective length of database: 622,002,254
effective search space: 14928054096
effective search space used: 14928054096
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC136841.8