BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136504.7 + phase: 0
(261 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV43787.1| At4g35930 [Arabidopsis thaliana] gi|53828517|gb|A... 272 8e-72
emb|CAB81502.1| hypothetical protein [Arabidopsis thaliana] gi|3... 216 5e-55
gb|AAP53951.1| unknown protein [Oryza sativa (japonica cultivar-... 205 1e-51
dbj|BAC43001.1| unknown protein [Arabidopsis thaliana] gi|152199... 67 5e-10
gb|AAO39934.1| At1g61340 [Arabidopsis thaliana] 67 5e-10
emb|CAB81258.1| hypothetical protein [Arabidopsis thaliana] gi|3... 63 9e-09
ref|NP_567629.1| F-box family protein [Arabidopsis thaliana] 63 9e-09
gb|AAB01569.1| late embryogenesis abundant protein [Picea glauca... 60 6e-08
ref|XP_478713.1| unknown protein [Oryza sativa (japonica cultiva... 56 9e-07
emb|CAB81043.1| AT4g05010 [Arabidopsis thaliana] gi|5732077|gb|A... 54 3e-06
ref|XP_479453.1| putative shock protein SRC2 [Oryza sativa (japo... 40 0.050
ref|YP_179532.1| polyphosphate kinase [Campylobacter jejuni RM12... 37 0.42
emb|CAB73786.1| polyphosphate kinase [Campylobacter jejuni subsp... 37 0.42
ref|XP_575809.1| PREDICTED: similar to hypothetical protein MGC4... 36 0.94
gb|AAN70546.1| ATP-dependent RNA helicase, DEAD box family [Pseu... 35 1.6
ref|ZP_00367409.1| polyphosphate kinase [Campylobacter coli RM22... 35 2.7
gb|AAG52175.1| hypothetical protein; 64929-63336 [Arabidopsis th... 34 4.7
ref|YP_117883.1| hypothetical protein nfa16730 [Nocardia farcini... 34 4.7
ref|ZP_00264647.1| COG0513: Superfamily II DNA and RNA helicases... 34 4.7
ref|XP_535391.1| PREDICTED: similar to peptidylarginine deiminas... 33 6.1
>gb|AAV43787.1| At4g35930 [Arabidopsis thaliana] gi|53828517|gb|AAU94368.1|
At4g35930 [Arabidopsis thaliana]
gi|42567437|ref|NP_195318.2| expressed protein
[Arabidopsis thaliana]
Length = 321
Score = 272 bits (695), Expect = 8e-72
Identities = 160/305 (52%), Positives = 195/305 (63%), Gaps = 55/305 (18%)
Query: 10 RRKLKKSGTKYLKPGTLAQLRCSKYLGSGS----GAGRV-------CNDIGKKRVELLNL 58
++KLK S KYLKPG L QL SK + S G RV CND+GKKRV + ++
Sbjct: 17 KKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDTKSCNDLGKKRVPVFDI 76
Query: 59 EKNEDHEGKVFD----KSPLMLSPVNLVKQSSSVG------------------------- 89
+ +++ V KSPLMLSPVN+VK+S+ V
Sbjct: 77 KHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQVESNNTCKKSPLMLSPM 136
Query: 90 ----------TPKTPRIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAV 139
TPKTP+ D C SES+LESLP+DLLVKI+C LHHDQL+AVFHVSQRIR A
Sbjct: 137 GIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHDQLKAVFHVSQRIRMAT 196
Query: 140 IVARQFHFNYTTPDRSRLEMLSTMTPRPSEHWPFLCRGDGKGLRIPSPHTPKAPRHGPRP 199
I+ARQ+HFNYTTPDRSR EML MTP P WPF RGDG + SPHTPKAP+H PRP
Sbjct: 197 ILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPFR-RGDGNPTMVSSPHTPKAPKHAPRP 255
Query: 200 PSRLKVSEMRQVTAVLFK-ESAFASRCMVPSVIPKPQC-KSVASN--RVLFCEDELCKAV 255
PSR K++EM+Q+TAVLF+ ++ F SRC+VPSV+ +P K +A RVLF EDELC+AV
Sbjct: 256 PSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAPKHPRVLFYEDELCQAV 315
Query: 256 AQNKL 260
AQN L
Sbjct: 316 AQNNL 320
>emb|CAB81502.1| hypothetical protein [Arabidopsis thaliana]
gi|3805859|emb|CAA21479.1| hypothetical protein
[Arabidopsis thaliana] gi|3036797|emb|CAA18487.1|
hypothetical protein [Arabidopsis thaliana]
gi|7486393|pir||T04703 hypothetical protein F4B14.200 -
Arabidopsis thaliana
Length = 296
Score = 216 bits (550), Expect = 5e-55
Identities = 139/305 (45%), Positives = 172/305 (55%), Gaps = 80/305 (26%)
Query: 10 RRKLKKSGTKYLKPGTLAQLRCSKYLGSGS----GAGRV-------CNDIGKKRVELLNL 58
++KLK S KYLKPG L QL SK + S G RV CND+GKKRV + ++
Sbjct: 17 KKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDTKSCNDLGKKRVPVFDI 76
Query: 59 EKNEDHEGKV----FDKSPLMLSPVNLVKQSSSV-------------------------- 88
+ +++ V KSPLMLSPVN+VK+S+ V
Sbjct: 77 KHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQVESNNTCKKSPLMLSPM 136
Query: 89 ---------GTPKTPRIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAV 139
TPKTP+ D C SES+LESLP+DLL
Sbjct: 137 GIVMQNTLLRTPKTPQADPCVSESQLESLPMDLL-------------------------T 171
Query: 140 IVARQFHFNYTTPDRSRLEMLSTMTPRPSEHWPFLCRGDGKGLRIPSPHTPKAPRHGPRP 199
I+ARQ+HFNYTTPDRSR EML MTP P WPF RGDG + SPHTPKAP+H PRP
Sbjct: 172 ILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPFR-RGDGNPTMVSSPHTPKAPKHAPRP 230
Query: 200 PSRLKVSEMRQVTAVLFK-ESAFASRCMVPSVIPKPQC-KSVASN--RVLFCEDELCKAV 255
PSR K++EM+Q+TAVLF+ ++ F SRC+VPSV+ +P K +A RVLF EDELC+AV
Sbjct: 231 PSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAPKHPRVLFYEDELCQAV 290
Query: 256 AQNKL 260
AQN L
Sbjct: 291 AQNNL 295
>gb|AAP53951.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|37534724|ref|NP_921664.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 232
Score = 205 bits (521), Expect = 1e-51
Identities = 121/257 (47%), Positives = 163/257 (63%), Gaps = 36/257 (14%)
Query: 8 KGRRKLKKSGTKYLKPGTLAQLRCSKYLGSGSGAGRVCNDIGKKRVELLNLEKNE-DHEG 66
K ++++K + KYLKPG LAQ+R S+ DIGKKR+ LLN++K+E E
Sbjct: 9 KQKKRVKHTKNKYLKPGALAQIRYSR---------STSRDIGKKRI-LLNVDKDELPQEE 58
Query: 67 KVFDKSPLMLSPVNLVKQSSSVGTPKTPRIDECQSESRLESLPIDLLVKILCCLHHDQLR 126
F+ + M+SP L + S GT +KI+CCLHHDQL
Sbjct: 59 VAFENTEPMMSPKRLNFEPFS-GTKGQ--------------------IKIICCLHHDQLN 97
Query: 127 AVFHVSQRIRKAVIVARQFHFNYTTPDRSRLEMLSTMTPRPSEHWPFLCRGDGKGLRIPS 186
VFHVS+RIRKAV +ARQ+HFNYTTPDRSR E+L TP P+EHWPF+ R DGK +RI +
Sbjct: 98 IVFHVSKRIRKAVELARQYHFNYTTPDRSRQELLQHTTPLPTEHWPFM-RIDGKDVRIST 156
Query: 187 PHTPKAPRHGPRPPSRLKVSEMRQVTAVLFKESAFASRC--MVPSVIPKPQCKSVASNRV 244
P TPKAP+H PR +RL++ + + +TAVLF ++ + R +P +P+P K+ +S RV
Sbjct: 157 PRTPKAPKHAPR-LARLELLDFKPITAVLFPDTFPSKRLRRSMPPGLPRPVSKAASSTRV 215
Query: 245 LFCEDELCKAVAQNKLL 261
L E+ELC+AVAQNKLL
Sbjct: 216 LLYEEELCEAVAQNKLL 232
>dbj|BAC43001.1| unknown protein [Arabidopsis thaliana] gi|15219910|ref|NP_176329.1|
F-box family protein [Arabidopsis thaliana]
Length = 185
Score = 67.0 bits (162), Expect = 5e-10
Identities = 41/121 (33%), Positives = 67/121 (54%), Gaps = 15/121 (12%)
Query: 35 LGSGSGAGRVCNDIGKKRVELLNLEKNEDHEGKVFDKSPLMLSPVNLVKQSSSVGTPKTP 94
LG G + G+KR+ + + ++ ED + SPV + KT
Sbjct: 26 LGLGLEFVQYKRGFGRKRILISSGDEMEDS---------IFTSPVG-----KKLCDDKTT 71
Query: 95 RIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAVIVARQFHFNYTTPDR 154
+ E QS LE LP+D+LV+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP +
Sbjct: 72 SVAEGQSRE-LEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRK 130
Query: 155 S 155
+
Sbjct: 131 T 131
>gb|AAO39934.1| At1g61340 [Arabidopsis thaliana]
Length = 185
Score = 67.0 bits (162), Expect = 5e-10
Identities = 41/121 (33%), Positives = 67/121 (54%), Gaps = 15/121 (12%)
Query: 35 LGSGSGAGRVCNDIGKKRVELLNLEKNEDHEGKVFDKSPLMLSPVNLVKQSSSVGTPKTP 94
LG G + G+KR+ + + ++ ED + SPV + KT
Sbjct: 26 LGLGLEFVQYKRGFGRKRILISSGDEMEDS---------IFTSPVG-----KKLCDDKTT 71
Query: 95 RIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAVIVARQFHFNYTTPDR 154
+ E QS LE LP+D+LV+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP +
Sbjct: 72 SVAEGQSRE-LEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRK 130
Query: 155 S 155
+
Sbjct: 131 T 131
>emb|CAB81258.1| hypothetical protein [Arabidopsis thaliana]
gi|3080395|emb|CAA18715.1| hypothetical protein
[Arabidopsis thaliana] gi|7485710|pir||T05159
hypothetical protein F18E5.130 - Arabidopsis thaliana
Length = 192
Score = 62.8 bits (151), Expect = 9e-09
Identities = 55/190 (28%), Positives = 91/190 (46%), Gaps = 35/190 (18%)
Query: 38 GSGAGRVCNDIGKKRVELLNLEKNEDH----EGKVFDKSPLMLSPVNLVKQSSSVGTPKT 93
G G+ R +G+KR+ + + + E V +SP + S +L +Q S + T
Sbjct: 26 GLGSVRFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKS--SLKRQRSRI----T 79
Query: 94 PRIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAVIVARQFHFNYTTPD 153
+SRLE LP DLL++++C + H+ L+++ VS+ IR+A +VA+ HF YTTP
Sbjct: 80 IVSSSSSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPK 139
Query: 154 RSR-------LEMLSTMTPRPSEHWPFLCRGDGKGLRIPSPHTPKAPRHGPRPPSRLKVS 206
++R LE +S + + P P APRH ++ K
Sbjct: 140 KTRAFRNSIDLEEVSDSRHQEDDIEP-----------------PNAPRHYRWTKAKRK-E 181
Query: 207 EMRQVTAVLF 216
++ V+A LF
Sbjct: 182 QLSSVSAALF 191
>ref|NP_567629.1| F-box family protein [Arabidopsis thaliana]
Length = 225
Score = 62.8 bits (151), Expect = 9e-09
Identities = 55/190 (28%), Positives = 91/190 (46%), Gaps = 35/190 (18%)
Query: 38 GSGAGRVCNDIGKKRVELLNLEKNEDH----EGKVFDKSPLMLSPVNLVKQSSSVGTPKT 93
G G+ R +G+KR+ + + + E V +SP + S +L +Q S + T
Sbjct: 59 GLGSVRFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKS--SLKRQRSRI----T 112
Query: 94 PRIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAVIVARQFHFNYTTPD 153
+SRLE LP DLL++++C + H+ L+++ VS+ IR+A +VA+ HF YTTP
Sbjct: 113 IVSSSSSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPK 172
Query: 154 RSR-------LEMLSTMTPRPSEHWPFLCRGDGKGLRIPSPHTPKAPRHGPRPPSRLKVS 206
++R LE +S + + P P APRH ++ K
Sbjct: 173 KTRAFRNSIDLEEVSDSRHQEDDIEP-----------------PNAPRHYRWTKAKRK-E 214
Query: 207 EMRQVTAVLF 216
++ V+A LF
Sbjct: 215 QLSSVSAALF 224
>gb|AAB01569.1| late embryogenesis abundant protein [Picea glauca]
gi|7484467|pir||T09287 late embryonic abundant protein
EMB6 - white spruce
Length = 239
Score = 60.1 bits (144), Expect = 6e-08
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 97 DECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAVIVARQFHFNYTTPDRSR 156
DE + L SL +D+LV+++C L H +L + VS+ ++AV VA + HF + TPD R
Sbjct: 79 DENSAGRDLASLALDVLVEVVCNLGHHELEPLTRVSKDFKQAVKVANETHFGFKTPDPVR 138
Query: 157 LEMLSTMTPRPSEHWPFLCRGDGKGLRIPS--PHTPKAPRHGPRPPSRL-KVSEMRQVTA 213
S + + G PS P TPKAP+ + + L E ++
Sbjct: 139 RPNRSLFLNQSHAN-------SASGSDSPSRWPATPKAPKRVVKHRNLLASDKEFADLSR 191
Query: 214 VLFKESAFASRCMV----PSVIPKPQCKSVASNRVLFCEDELCKAVAQN 258
VLF + S V ++ KP +A+NR LF DEL A++++
Sbjct: 192 VLFLDGNQPSGVDVVDAEHTICLKP---GIATNRALFSTDELSGALSRH 237
>ref|XP_478713.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|50508675|dbj|BAD31160.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|34393368|dbj|BAC83377.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 168
Score = 56.2 bits (134), Expect = 9e-07
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 77 SPVNLVKQSSSVGTPKTPRIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIR 136
SPV +++ S R+ + S LESLP D+L+K+LC ++H LR + VS+++
Sbjct: 45 SPVRTLRKQRST------RLHMDDAVSLLESLPQDVLIKVLCKVNHSDLRPLLLVSKQVS 98
Query: 137 KAVIVARQFHFNYTTP 152
+A +VAR+ HF + TP
Sbjct: 99 EATVVAREQHFAFATP 114
>emb|CAB81043.1| AT4g05010 [Arabidopsis thaliana] gi|5732077|gb|AAD48976.1| similar
to Arabidopsis thaliana hypothetical protein GB:AL022603
gi|25407310|pir||A85063 hypothetical protein AT4g05010
[imported] - Arabidopsis thaliana
gi|18412772|ref|NP_567282.1| F-box family protein
[Arabidopsis thaliana]
Length = 164
Score = 54.3 bits (129), Expect = 3e-06
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 85 SSSVGTPKTPRIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAVIVARQ 144
S V P + C+S LE+L D+L+++LC + H+ L + VS+ IRKAVI A++
Sbjct: 46 SPPVKRPSHETTESCRS--LLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKK 103
Query: 145 FHFNYTTPDR 154
HF+Y+TP +
Sbjct: 104 SHFDYSTPKK 113
>ref|XP_479453.1| putative shock protein SRC2 [Oryza sativa (japonica
cultivar-group)] gi|51963636|ref|XP_506555.1| PREDICTED
P0470D12.106 gene product [Oryza sativa (japonica
cultivar-group)] gi|50510081|dbj|BAD30733.1| putative
shock protein SRC2 [Oryza sativa (japonica
cultivar-group)] gi|22831118|dbj|BAC15979.1| putative
shock protein SRC2 [Oryza sativa (japonica
cultivar-group)]
Length = 310
Score = 40.4 bits (93), Expect = 0.050
Identities = 27/94 (28%), Positives = 41/94 (42%), Gaps = 6/94 (6%)
Query: 120 LHHDQLRAVFHVSQRIRKAVIVARQFHFNYTTPDRSRLEMLSTMTPRPSEHWPFLCRGDG 179
LH + R V H+S R+ +VA Q F Y P ++ T P P P++
Sbjct: 121 LHRSETRGVLHLSYRL--GPVVAPQSVFAYPAPPPPPPQLFETAPPSP----PYVPPPPD 174
Query: 180 KGLRIPSPHTPKAPRHGPRPPSRLKVSEMRQVTA 213
LR PSP +P + P PP + + + + A
Sbjct: 175 AYLRKPSPPSPPPAKLSPPPPPQTQTQPLAKPPA 208
>ref|YP_179532.1| polyphosphate kinase [Campylobacter jejuni RM1221]
gi|57167205|gb|AAW35984.1| polyphosphate kinase
[Campylobacter jejuni RM1221]
Length = 694
Score = 37.4 bits (85), Expect = 0.42
Identities = 28/109 (25%), Positives = 54/109 (48%), Gaps = 17/109 (15%)
Query: 46 NDIGKKRVELLNLEKNEDHEGKVFDKSPLMLSPVNLVKQSSSVGTPKTPRIDECQSESRL 105
N I +K +E++ +E ++ +EG + + K +S V + I + E+ +
Sbjct: 500 NQIKEKVLEMIRIETSKKNEGVI------------VAKMNSLVDSD----IIQALYEASM 543
Query: 106 ESLPIDLLVKILCCLHHD-QLRAVFHVSQRIRKAVIVARQFHFNYTTPD 153
E + IDL+++ +CCL D + V I K + AR F+F ++ P+
Sbjct: 544 EGVQIDLIIRGICCLKPDEEYSKNIRVRSIIGKYLEHARVFYFKHSEPN 592
>emb|CAB73786.1| polyphosphate kinase [Campylobacter jejuni subsp. jejuni NCTC
11168] gi|11281340|pir||D81280 polyphosphate kinase (EC
2.7.4.1) Cj1359 [imported] - Campylobacter jejuni
(strain NCTC 11168) gi|15792682|ref|NP_282505.1|
polyphosphate kinase [Campylobacter jejuni subsp. jejuni
NCTC 11168] gi|13878632|sp|Q9PMU0|PPK_CAMJE
Polyphosphate kinase (Polyphosphoric acid kinase)
(ATP-polyphosphate phosphotransferase)
Length = 694
Score = 37.4 bits (85), Expect = 0.42
Identities = 28/109 (25%), Positives = 54/109 (48%), Gaps = 17/109 (15%)
Query: 46 NDIGKKRVELLNLEKNEDHEGKVFDKSPLMLSPVNLVKQSSSVGTPKTPRIDECQSESRL 105
N I +K +E++ +E ++ +EG + + K +S V + I + E+ +
Sbjct: 500 NQIKEKVLEMIRIETSKKNEGVI------------VAKMNSLVDSD----IIQALYEASM 543
Query: 106 ESLPIDLLVKILCCLHHD-QLRAVFHVSQRIRKAVIVARQFHFNYTTPD 153
E + IDL+++ +CCL D + V I K + AR F+F ++ P+
Sbjct: 544 EGVQIDLIIRGICCLKPDEEYSKNIRVRSIIGKYLEHARVFYFKHSEPN 592
>ref|XP_575809.1| PREDICTED: similar to hypothetical protein MGC41945 [Rattus
norvegicus]
Length = 1205
Score = 36.2 bits (82), Expect = 0.94
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 16/137 (11%)
Query: 66 GKVFDKSPLMLSPVNLVKQSSSVGTPKTPRIDECQSESRLESLPIDLLVK-ILCCLHHDQ 124
GK DK+P++LS + G+P+ P+ ++C +RLES + + C +
Sbjct: 1051 GKTQDKTPVLLS-------TQKRGSPRKPKAEKCGRTARLESSTVTREKNPVWACRPEEA 1103
Query: 125 LRAVFHVSQRIRKA----VIVARQFHFNYTTP-DRSRLEMLS--TMTPRPSEHWPFLCR- 176
++ + + + +Q N T P DR R ++ T P P +H P++ R
Sbjct: 1104 SKSRLPEKSQYKAQSSPHTALVQQVLPNTTGPRDRQRSGPVAGDTQNPCPCKHCPWIPRK 1163
Query: 177 GDGKGLRIPSPHTPKAP 193
G I TPKAP
Sbjct: 1164 KQGSSTPILPSSTPKAP 1180
>gb|AAN70546.1| ATP-dependent RNA helicase, DEAD box family [Pseudomonas putida
KT2440] gi|26991657|ref|NP_747082.1| ATP-dependent RNA
helicase, DEAD box family [Pseudomonas putida KT2440]
Length = 626
Score = 35.4 bits (80), Expect = 1.6
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 185 PSPHTPKAPRHGPRPPSRLKVSEMRQVTA-------VLFKESAFASRCMVPSVIPKPQCK 237
P+ H K+ RHGPR P L ++ R++ A V ++ S C+ V PQ +
Sbjct: 65 PAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMNPQIQ 124
Query: 238 SVAS--NRVLFCEDELCKAVAQNKL 260
++A + ++ C L Q K+
Sbjct: 125 AIAKGVDVLVACPGRLLDLAGQGKV 149
>ref|ZP_00367409.1| polyphosphate kinase [Campylobacter coli RM2228]
gi|57020644|gb|EAL57313.1| polyphosphate kinase
[Campylobacter coli RM2228]
Length = 694
Score = 34.7 bits (78), Expect = 2.7
Identities = 28/109 (25%), Positives = 53/109 (47%), Gaps = 17/109 (15%)
Query: 46 NDIGKKRVELLNLEKNEDHEGKVFDKSPLMLSPVNLVKQSSSVGTPKTPRIDECQSESRL 105
N I +K +E++ LE ++ EG + + K +S V + I + E+ +
Sbjct: 500 NQIKEKILEMIALEASKGSEGVI------------IAKMNSLVDSD----IIKALYEASI 543
Query: 106 ESLPIDLLVKILCCLH-HDQLRAVFHVSQRIRKAVIVARQFHFNYTTPD 153
+ IDL+V+ +CCL +++ V I K + AR F+F ++ P+
Sbjct: 544 KGTQIDLIVRGICCLKPNEEFSKNIRVRSIIGKYLEHARVFYFKHSEPN 592
>gb|AAG52175.1| hypothetical protein; 64929-63336 [Arabidopsis thaliana]
Length = 449
Score = 33.9 bits (76), Expect = 4.7
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 93 TPRIDECQSESRLESLPIDLLVKILCCLHHDQLRAVFHVSQRIRKAVIVARQFHFNYTTP 152
T ++ E R+ SLP DLLVKIL C+ A +S+R R + + ++ TT
Sbjct: 2 TELVEHRVCEDRISSLPDDLLVKILLCVPTKDAAATTFLSKRWRFVWRMLPRLNYIETTS 61
Query: 153 D 153
D
Sbjct: 62 D 62
>ref|YP_117883.1| hypothetical protein nfa16730 [Nocardia farcinica IFM 10152]
gi|54015149|dbj|BAD56519.1| hypothetical protein
[Nocardia farcinica IFM 10152]
Length = 812
Score = 33.9 bits (76), Expect = 4.7
Identities = 32/109 (29%), Positives = 41/109 (37%), Gaps = 15/109 (13%)
Query: 131 VSQRIRKAVIVARQFHFNY--TTPDRSRLEMLSTMTPRPSEHWPFLCRGDGKGLRIPSPH 188
V QR + + AR + T P R +T TPRP+ P+P
Sbjct: 610 VRQRALRLIAPARTMRDSPPPTPPQRPAWLSTATATPRPAPR---------DRRTPPTPS 660
Query: 189 TPKAPRHGP----RPPSRLKVSEMRQVTAVLFKESAFASRCMVPSVIPK 233
TP PR GP RPPS V + A L + R P V P+
Sbjct: 661 TPTPPRTGPVGVSRPPSPRAVLHEMRARARLLTDRTPTRRSTTPPVNPR 709
>ref|ZP_00264647.1| COG0513: Superfamily II DNA and RNA helicases [Pseudomonas
fluorescens PfO-1]
Length = 622
Score = 33.9 bits (76), Expect = 4.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 185 PSPHTPKAPRHGPRPPSRLKVSEMRQVTA-------VLFKESAFASRCMVPSVIPKPQCK 237
P+ H K+ RHGPR P L ++ R++ A + ++ F S C+ V PQ +
Sbjct: 65 PNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKIYARDLKFVSACIFGGVGMNPQVQ 124
Query: 238 SVA 240
+++
Sbjct: 125 AMS 127
>ref|XP_535391.1| PREDICTED: similar to peptidylarginine deiminase type III [Canis
familiaris]
Length = 2481
Score = 33.5 bits (75), Expect = 6.1
Identities = 48/182 (26%), Positives = 75/182 (40%), Gaps = 40/182 (21%)
Query: 71 KSPLMLSPVNLVKQSSSVGTPKT--PRID-ECQSESRLESL--PIDL-LVKILCCLHHDQ 124
+ P SPVN+V +G PK P I+ +C E ++ SL P+ L + I L + +
Sbjct: 1577 RPPAGCSPVNMVVLGKYLGIPKPFGPIINGQCCLEEKVRSLLEPLGLHCIFIDDYLFYHE 1636
Query: 125 LRAVFHVSQRIRKAVIVARQFHFNYTTPDRSRLEMLSTMTPRPSEHWPFLCRGDGKGLRI 184
L H +R+ R F F + M+S++ E C G GL +
Sbjct: 1637 LLGEIHCGTNVRR-----RPFSFKWW-------HMVSSLRVLYPE-----CEG---GLAV 1676
Query: 185 PSPHTPKAP------RHGPR----PPSRLKVSEMRQVTAVLFKESAFASRCMVPSVIPKP 234
P K P R GP PP ++++ T S A R P+++P+P
Sbjct: 1677 PDVTGGKGPEGGGEERGGPSFQFSPPCPSSLAQLPLATG----SSYLAGRAPGPALVPQP 1732
Query: 235 QC 236
+C
Sbjct: 1733 RC 1734
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,938,816
Number of Sequences: 2540612
Number of extensions: 20066315
Number of successful extensions: 56267
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 56227
Number of HSP's gapped (non-prelim): 31
length of query: 261
length of database: 863,360,394
effective HSP length: 125
effective length of query: 136
effective length of database: 545,783,894
effective search space: 74226609584
effective search space used: 74226609584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)
Medicago: description of AC136504.7