BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136472.10 + phase: 0
(427 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV59313.1| putative tubby protein [Oryza sativa (japonica cu... 656 0.0
ref|NP_173899.1| F-box family protein / tubby family protein [Ar... 629 e-179
gb|AAC00626.1| similar to 'tub' protein gp|U82468|2072162 [Arabi... 618 e-176
gb|AAX95106.1| Tub family, putative [Oryza sativa (japonica cult... 613 e-174
ref|XP_474442.1| OSJNBa0039K24.2 [Oryza sativa (japonica cultiva... 605 e-172
emb|CAB53492.1| CAA303719.1 protein [Oryza sativa] 605 e-172
ref|NP_915646.1| putative tubby protein [Oryza sativa (japonica ... 605 e-171
ref|XP_479670.1| putative chain A, C-terminal domain of mouse br... 593 e-168
gb|AAM67505.1| unknown protein [Arabidopsis thaliana] gi|1817605... 588 e-166
gb|AAN46231.1| unknown protein [Arabidopsis thaliana] gi|2818860... 577 e-163
gb|AAN46232.1| unknown protein [Arabidopsis thaliana] 576 e-163
gb|AAN46233.1| unknown protein [Arabidopsis thaliana] 575 e-163
gb|AAN46237.1| unknown protein [Arabidopsis lyrata] gi|28188621|... 574 e-162
dbj|BAA82866.1| tubby-like protein [Lemna paucicostata] 547 e-154
gb|AAD39275.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 509 e-143
gb|AAM20254.1| putative tubby protein [Arabidopsis thaliana] gi|... 477 e-133
gb|AAM15124.1| putative tubby protein [Arabidopsis thaliana] gi|... 473 e-132
ref|XP_467371.1| putative tubby-like protein [Oryza sativa (japo... 453 e-126
ref|NP_910978.1| putative tubby related protein [Oryza sativa (j... 441 e-122
gb|AAX95105.1| Tub family, putative [Oryza sativa (japonica cult... 416 e-115
>gb|AAV59313.1| putative tubby protein [Oryza sativa (japonica cultivar-group)]
gi|50931567|ref|XP_475311.1| putative tubby protein
[Oryza sativa (japonica cultivar-group)]
gi|46981293|gb|AAT07611.1| putative tubby protein [Oryza
sativa (japonica cultivar-group)]
Length = 445
Score = 656 bits (1693), Expect = 0.0
Identities = 341/447 (76%), Positives = 382/447 (85%), Gaps = 22/447 (4%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTG-----HHHRGKSHGSVQDLHDQPLVIQNSCWA 55
MSFRSIVRDVRDSFGSLSRRSF+V L G HHRGKS +V +L D L+IQ S WA
Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
Query: 56 NLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSL 115
+LPPELL DVIRRLE SE+TWPSRK VV+CA+VC++WR MCK+IV SPEFCGKLTFP+SL
Sbjct: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
Query: 116 KQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMD 175
KQPGPRDG+IQCFIKRDKS TYHL+LCLS A+L ++GKFLLSAKR R+TT TEYVISMD
Sbjct: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
Query: 176 ADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVP 234
ADNISRSS+TYIGKLRSNFLGTKFIIYDTQP A I P G++SRRF SKKVSPK+P
Sbjct: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVI--PPVGRSSRRFNSKKVSPKMP 238
Query: 235 SGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPE-LIHRSLEDSFRS 293
SGSYNIAQVTYELNVLGTRGPR+MHC+MHSIP S+++ GG VPGQPE ++ R+ E+SFRS
Sbjct: 239 SGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRS 298
Query: 294 -ISFSKS--LDHSI------EFSSARFSEI-GGSCNEDDDG--KMRPLVLKNKPPRWHEQ 341
SFSKS +D S+ +FSSARFS+I GG+ N D++G K RPLVL+NK PRWHEQ
Sbjct: 299 TTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQ 358
Query: 342 LQCWCLNFRGRVTVASVKNFQLIAS-TQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFT 400
LQCWCLNFRGRVT+ASVKNFQLIA+ QPPAGAPTPSQPAPPE DKIILQFGKV KDMFT
Sbjct: 359 LQCWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFT 418
Query: 401 MDYRYPLSAFQAFAICLSSFDTKLACE 427
MDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 419 MDYRYPLSAFQAFAICLSSFDTKLACE 445
>ref|NP_173899.1| F-box family protein / tubby family protein [Arabidopsis thaliana]
gi|33320973|gb|AAQ06244.1| tubby-like protein TULP10
[Arabidopsis thaliana] gi|25518577|pir||E86382
hypothetical protein F4F7.33 [imported] - Arabidopsis
thaliana gi|11067277|gb|AAG28805.1| unknown protein
[Arabidopsis thaliana]
Length = 445
Score = 629 bits (1622), Expect = e-179
Identities = 328/448 (73%), Positives = 374/448 (83%), Gaps = 24/448 (5%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSV-------QDLHDQPLVIQNSC 53
MSFR IV+D+RD FGSLSRRSFD +L+ H +GK+ GS +DL P+++Q S
Sbjct: 1 MSFRGIVQDLRDGFGSLSRRSFDFRLSSLH-KGKAQGSSFREYSSSRDLLS-PVIVQTSR 58
Query: 54 WANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPV 113
WANLPPELLFDVI+RLEESE+ WP+RKHVVACASVC+SWR MC++IV PE CGKLTFPV
Sbjct: 59 WANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPV 118
Query: 114 SLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVIS 173
SLKQPGPRD +IQCFIKRDKS LT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEY+IS
Sbjct: 119 SLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIIS 178
Query: 174 MDADNISRSSNTYIGKLRSNFLGTKFIIYDTQ-PPCTSAHICPPGTGKTSRRFSKKVSPK 232
MDADNISRSSN+Y+GKLRSNFLGTKF++YDTQ PP TS+ SR S++VSPK
Sbjct: 179 MDADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPK 238
Query: 233 VPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELI---HRSLED 289
VPSGSYNIAQ+TYELNVLGTRGPR+MHCIM+SIP S+L+ GGSVP QPE + SL+D
Sbjct: 239 VPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDD 298
Query: 290 SFRS-ISFSK-SLDH-SIEFSSARFSEIGGSCNE-DDDGKMRPLVLKNKPPRWHEQLQCW 345
SFRS ISFSK S DH S++FSS+RFSE+G SC++ +++ RPL+LKNK PRWHEQLQCW
Sbjct: 299 SFRSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCW 358
Query: 346 CLNFRGRVTVASVKNFQLIASTQP------PAGAPTPSQPAPPEHDKIILQFGKVGKDMF 399
CLNFRGRVTVASVKNFQL+A+ QP A APT S PA PE DK+ILQFGKVGKDMF
Sbjct: 359 CLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPT-SAPAHPEQDKVILQFGKVGKDMF 417
Query: 400 TMDYRYPLSAFQAFAICLSSFDTKLACE 427
TMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 418 TMDYRYPLSAFQAFAICLSSFDTKLACE 445
>gb|AAC00626.1| similar to 'tub' protein gp|U82468|2072162 [Arabidopsis thaliana]
gi|22654973|gb|AAM98079.1| At1g76900/F7O12_7
[Arabidopsis thaliana] gi|27764966|gb|AAO23604.1|
At1g76900/F7O12_7 [Arabidopsis thaliana]
gi|15223772|ref|NP_177816.1| F-box family protein /
tubby family protein [Arabidopsis thaliana]
gi|30699209|ref|NP_849894.1| F-box family protein /
tubby family protein [Arabidopsis thaliana]
gi|33320965|gb|AAQ06240.1| tubby-like protein TULP1
[Arabidopsis thaliana] gi|12322225|gb|AAG51146.1| Tub
family protein, putative [Arabidopsis thaliana]
gi|25406477|pir||H96797 hypothetical protein F22K20.1
[imported] - Arabidopsis thaliana
Length = 455
Score = 618 bits (1594), Expect = e-176
Identities = 331/456 (72%), Positives = 370/456 (80%), Gaps = 30/456 (6%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTG-HHHRGKSHGSVQDLHDQPLV--IQNSCWANL 57
MSFRSIVRDVRDS GSLSRRSFD KL+ + GKS GSVQD H++ LV IQ + WANL
Sbjct: 1 MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWANL 60
Query: 58 PPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQ 117
PPELL DVI+RLEESE+ WP+R+HVVACASVC+SWR+MCK+IV+SPE GK+TFPVSLKQ
Sbjct: 61 PPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQ 120
Query: 118 PGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDAD 177
PGPRD +QCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKR RRTTYTEYVISM AD
Sbjct: 121 PGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHAD 180
Query: 178 NISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTS--AHICPPGTGKTSRRFSKKVSPKVPS 235
ISRSSNTYIGK+RSNFLGTKFIIYDTQP S A P G + R +SK+VSPKVPS
Sbjct: 181 TISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQP-VGLSRRFYSKRVSPKVPS 239
Query: 236 GSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELI--HRSLEDSFRS 293
GSY IAQV+YELNVLGTRGPR+MHC M+SIP S+L GG+VPGQP++I L++SFRS
Sbjct: 240 GSYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRS 299
Query: 294 ISFSKS----LDHSIEFSSARFSEIGGSCNED-----DDGKMR---PLVLKNKPPRWHEQ 341
I+ S S D+S +FSSARFS+I G +ED ++GK R PLVLKNKPPRWHEQ
Sbjct: 300 ITSSSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQ 359
Query: 342 LQCWCLNFRGRVTVASVKNFQLIASTQP-PAGAPTP-----SQPAPPEH----DKIILQF 391
LQCWCLNFRGRVTVASVKNFQLIA+ QP P P P +QP P DKIILQF
Sbjct: 360 LQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQF 419
Query: 392 GKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
GKVGKDMFTMD+RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 420 GKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455
>gb|AAX95106.1| Tub family, putative [Oryza sativa (japonica cultivar-group)]
Length = 440
Score = 613 bits (1581), Expect = e-174
Identities = 307/443 (69%), Positives = 360/443 (80%), Gaps = 19/443 (4%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 60
MSFRSIVRDVRD FGSLSRR F+V++ GH RGKSHG+V +LHD VIQ+SCWA+LPPE
Sbjct: 1 MSFRSIVRDVRDGFGSLSRRGFEVRILGHR-RGKSHGAVHELHDPVPVIQSSCWASLPPE 59
Query: 61 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 120
LL D+I RLEESE TWPSRKHVVACA VC++WR MCK+IV++PE CGK+TFP+SL+QPGP
Sbjct: 60 LLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGP 119
Query: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 180
RDG +QCFI+RDKS TY+L+L L A+LV+NGKFLLSAKR T TEYVISM+A+N+S
Sbjct: 120 RDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLS 179
Query: 181 RSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNI 240
RS+NT IGKLRSNFLGTKF+IYDT P + +GKTSRRFS K + K P +Y+I
Sbjct: 180 RSTNTNIGKLRSNFLGTKFVIYDTHTPYNAT--SDSQSGKTSRRFSNKGTAKHPCSTYSI 237
Query: 241 AQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPE--LIHRSLEDSFRSISFSK 298
A ++YELNV GTRGPR+M C+MHSIP S+L+AGG+VP QP+ L H E SFRS+SFSK
Sbjct: 238 ANISYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSK 297
Query: 299 S--LDHSIEFSSARFSEI---------GGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCL 347
S +DHS+ FSSA+FS+I G ++D++ K PL+L+NK PRWHEQLQCWCL
Sbjct: 298 SSVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCL 357
Query: 348 NFRGRVTVASVKNFQLIASTQPPAGAPTPSQPA---PPEHDKIILQFGKVGKDMFTMDYR 404
NFRGRVTVASVKNFQLIA+TQP AGAPTPSQP PPEHDK+ILQFGKV KDMFTMDY
Sbjct: 358 NFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYH 417
Query: 405 YPLSAFQAFAICLSSFDTKLACE 427
YPLSAFQAFAI LSSFDTKLACE
Sbjct: 418 YPLSAFQAFAISLSSFDTKLACE 440
>ref|XP_474442.1| OSJNBa0039K24.2 [Oryza sativa (japonica cultivar-group)]
gi|32480039|emb|CAE01783.1| OSJNBa0039K24.2 [Oryza
sativa (japonica cultivar-group)]
Length = 462
Score = 605 bits (1561), Expect = e-172
Identities = 319/464 (68%), Positives = 363/464 (77%), Gaps = 39/464 (8%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGH--HHRGKSHGSVQDLHDQPLVIQNSCWANLP 58
MSFRSIVRD RDSFG+LS+RSF+VK++G HRGKS G +L D P+V Q S WA LP
Sbjct: 1 MSFRSIVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQSKWAGLP 60
Query: 59 PELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQP 118
PELL DV++RLEE ++ WPSRK VVACASVC +WR+MCKDIVR+PEFCGKLTFPVSLKQP
Sbjct: 61 PELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQP 120
Query: 119 GPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADN 178
GPRDG+IQCFIKRDKS LTYHL+LCLS A+L E GKFLLSAKR+RRTT+T+Y+ISMD+ N
Sbjct: 121 GPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKN 180
Query: 179 ISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPSGS 237
ISRSS+ YIGKLRSNFLGTKFIIYDTQPP + +C +TSRRF S+KVSPKVP+G
Sbjct: 181 ISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLC--SQERTSRRFSSRKVSPKVPTGC 238
Query: 238 YNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQP-ELIHRSLEDSFRSI-- 294
Y I QV YELNVLGTRGPR+M C MHSIP SA++ GG VPGQP EL+ R E+SFRS+
Sbjct: 239 YPIVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMAT 298
Query: 295 SFSK--SLDHSIEFSSARFSEIGGSC--------NEDDDGKMRPLVLKNKPPRWHEQLQC 344
SFSK DHS +FSS+RFSE GG + DD K RPLVL+NK PRWHEQLQC
Sbjct: 299 SFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQC 358
Query: 345 WCLNFRGRVTVASVKNFQLIAST-QPPAGAPT--------------PSQP------APPE 383
WCLNFRGRVTVASVKNFQLIA+ QP +GA + PSQP +
Sbjct: 359 WCLNFRGRVTVASVKNFQLIAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSN 418
Query: 384 HDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
HD +ILQFGKV KDMFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 419 HDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
>emb|CAB53492.1| CAA303719.1 protein [Oryza sativa]
Length = 462
Score = 605 bits (1561), Expect = e-172
Identities = 319/464 (68%), Positives = 363/464 (77%), Gaps = 39/464 (8%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGH--HHRGKSHGSVQDLHDQPLVIQNSCWANLP 58
MSFRSIVRD RDSFG+LS+RSF+VK++G HRGKS G +L D P+V Q S WA LP
Sbjct: 1 MSFRSIVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQSKWAGLP 60
Query: 59 PELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQP 118
PELL DV++RLEE ++ WPSRK VVACASVC +WR+MCKDIVR+PEFCGKLTFPVSLKQP
Sbjct: 61 PELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQP 120
Query: 119 GPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADN 178
GPRDG+IQCFIKRDKS LTYHL+LCLS A+L E GKFLLSAKR+RRTT+T+Y+ISMD+ N
Sbjct: 121 GPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKN 180
Query: 179 ISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPSGS 237
ISRSS+ YIGKLRSNFLGTKFIIYDTQPP + +C +TSRRF S+KVSPKVP+G
Sbjct: 181 ISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLC--SQERTSRRFSSRKVSPKVPTGC 238
Query: 238 YNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQP-ELIHRSLEDSFRSI-- 294
Y I QV YELNVLGTRGPR+M C MHSIP SA++ GG VPGQP EL+ R E+SFRS+
Sbjct: 239 YPIVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMAT 298
Query: 295 SFSK--SLDHSIEFSSARFSEIGGSC--------NEDDDGKMRPLVLKNKPPRWHEQLQC 344
SFSK DHS +FSS+RFSE GG + DD K RPLVL+NK PRWHEQLQC
Sbjct: 299 SFSKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQC 358
Query: 345 WCLNFRGRVTVASVKNFQLIAST-QPPAGAPT--------------PSQP------APPE 383
WCLNFRGRVTVASVKNFQLIA+ QP +GA + PSQP +
Sbjct: 359 WCLNFRGRVTVASVKNFQLIAAAPQPASGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSN 418
Query: 384 HDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
HD +ILQFGKV KDMFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 419 HDTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
>ref|NP_915646.1| putative tubby protein [Oryza sativa (japonica cultivar-group)]
gi|21644661|dbj|BAC01219.1| putative tubby-like protein
TULP10 [Oryza sativa (japonica cultivar-group)]
Length = 448
Score = 605 bits (1559), Expect = e-171
Identities = 310/450 (68%), Positives = 362/450 (79%), Gaps = 25/450 (5%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTG-----HHHRGKSHGSVQDLHDQPLVIQNSCWA 55
MSFRSIVRDVRD FGSLSRRSF+V L HH+GK+ S+ +L D P +I S WA
Sbjct: 1 MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESRWA 60
Query: 56 NLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSL 115
+LPPELL +VIRRLE E+TWPSR++VV A+VC++WR MCK+ V SPEFCGKLTFPVS+
Sbjct: 61 SLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSI 120
Query: 116 KQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMD 175
KQPGPRDG+IQC+IKR++S TYHL+LCLS + E GKF+L+AKR R+TT TEY ISM
Sbjct: 121 KQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMV 180
Query: 176 ADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVP 234
+ NISRSS T IGKLRSNFLGTKFIIYDTQPP A + P G+TS+RF S KVSPKVP
Sbjct: 181 SGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVV--PHVGRTSKRFNSTKVSPKVP 238
Query: 235 SGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPE-LIHRSLEDSFRS 293
S +YNIAQV+YELNVLGTRGPR+M C+MHSIP S+++ GG VPGQPE ++ R+LEDSFRS
Sbjct: 239 SVTYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRS 298
Query: 294 -----------ISFSKS-LDHSIEFSSARFSEIGGSCNEDDDG---KMRPLVLKNKPPRW 338
SFSKS +D S++FSSARFS+I GS DD K RPLVL+NKPPRW
Sbjct: 299 TTSFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRW 358
Query: 339 HEQLQCWCLNFRGRVTVASVKNFQLIAS-TQPPAGAPTPSQPAPPEHDKIILQFGKVGKD 397
HEQLQCWCLNFRGRVT+ASVKNFQL+A+ + PPAGAPTPSQP P + +K+ILQFGKV +D
Sbjct: 359 HEQLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGPADPEKVILQFGKVARD 418
Query: 398 MFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
MFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 419 MFTMDYRYPLSAFQAFAICLSSFDTKLACE 448
>ref|XP_479670.1| putative chain A, C-terminal domain of mouse brain tubby protein
[Oryza sativa (japonica cultivar-group)]
gi|51963694|ref|XP_506618.1| PREDICTED P0015C07.29 gene
product [Oryza sativa (japonica cultivar-group)]
gi|50725706|dbj|BAD33172.1| putative chain A, C-terminal
domain of mouse brain tubby protein [Oryza sativa
(japonica cultivar-group)]
Length = 451
Score = 593 bits (1528), Expect = e-168
Identities = 304/454 (66%), Positives = 357/454 (77%), Gaps = 30/454 (6%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTG-----HHHRGKSHGSVQDLHDQPLVIQNSCWA 55
MSFRSIVRDVRDSFGSLSRRSF+V+++G HHRGKS GS+ +L D+P+V+ S W
Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSRWV 60
Query: 56 NLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSL 115
LPPELL DV++RLEE E+ WPSRK VVACA+VC++WR +CKDIV+SPE CGKLTFPVSL
Sbjct: 61 GLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSL 120
Query: 116 KQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMD 175
KQPGPRDG+IQCFIKRDKS LTY+L+LCLSPA+L ENGKFLL+AKR RR T TEY+IS+D
Sbjct: 121 KQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVD 180
Query: 176 ADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHI--CPPGTGKTSRRFSKKVSPKV 233
+ NISRSSN Y+GK+RSNFLGTKF++YDTQPP + + C G+ + S S++VSPK+
Sbjct: 181 SKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRIS---SRRVSPKL 237
Query: 234 PSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPE-LIHRSLEDSFR 292
P+GSY IA V YELNVLGTRGPR+M C MHSIP SA+D G VPGQPE L+ E+SFR
Sbjct: 238 PTGSYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFR 297
Query: 293 SISFSKS---LDHSIEFSSARFSEIGGSCN---EDD--DGKMRPLVLKNKPPRWHEQLQC 344
S + S +D S++FSS+RFSEI GS N EDD + K RPLVL+NK PRWHEQLQC
Sbjct: 298 STNTSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQC 357
Query: 345 WCLNFRGRVTVASVKNFQLIAST-----------QPPAGAPTPSQPAPPEHDKIILQFGK 393
WCLNFRGRVTVASVKNFQLIA+ Q S + +H K+ILQFGK
Sbjct: 358 WCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGK 417
Query: 394 VGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
VGKDMFTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 418 VGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451
>gb|AAM67505.1| unknown protein [Arabidopsis thaliana] gi|18176058|gb|AAL59976.1|
unknown protein [Arabidopsis thaliana]
gi|18400968|ref|NP_564485.1| F-box family protein /
tubby family protein [Arabidopsis thaliana]
gi|15983382|gb|AAL11559.1| At1g43640/T10P12_16
[Arabidopsis thaliana] gi|37542294|gb|AAL03977.1|
tubby-like protein 5 [Arabidopsis thaliana]
Length = 429
Score = 588 bits (1516), Expect = e-166
Identities = 302/442 (68%), Positives = 356/442 (80%), Gaps = 28/442 (6%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGH--HHRGKSHGSVQDLHDQPLVIQNSCWANLP 58
MSF SIVRDVRD+ GS SRRSFDV+++ H R KSHG + D +VI+N+ WANLP
Sbjct: 1 MSFLSIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHGVEAHIEDL-IVIKNTRWANLP 59
Query: 59 PELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQP 118
LL DV+++L+ESE+TWP+RK VVACA VC++WR MCKDIV+SPEF GKLTFPVSLKQP
Sbjct: 60 AALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQP 119
Query: 119 GPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADN 178
GPRDGIIQC+IKRDKSN+TYHL+L LSPA+LVE+GKFLLSAKR+RR TYTEYVISMDADN
Sbjct: 120 GPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADN 179
Query: 179 ISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPSGS 237
ISRSS+TYIGKL+SNFLGTKFI+YDT P S+ I P SR F SKKVSPKVPSGS
Sbjct: 180 ISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSP--PNRSRSFNSKKVSPKVPSGS 237
Query: 238 YNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFS 297
YNIAQVTYELN+LGTRGPR+M+CIMHSIP+ AL+ GG+VP QPE + RSL++SFRSI S
Sbjct: 238 YNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSS 297
Query: 298 KSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 357
K ++HS +F+ + +++GK+RPLVLK KPPRW + L+CWCLNF+GRVTVAS
Sbjct: 298 KIVNHSGDFTRPK----------EEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVAS 347
Query: 358 VKNFQLI--ASTQPPAGAP----------TPSQPAPPEHDKIILQFGKVGKDMFTMDYRY 405
VKNFQL+ A+ QP +G+ +P QP HDKIIL FGKVGKDMFTMDYRY
Sbjct: 348 VKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRY 407
Query: 406 PLSAFQAFAICLSSFDTKLACE 427
PLSAFQAFAI LS+FDTKLACE
Sbjct: 408 PLSAFQAFAISLSTFDTKLACE 429
>gb|AAN46231.1| unknown protein [Arabidopsis thaliana] gi|28188609|gb|AAN46230.1|
unknown protein [Arabidopsis thaliana]
gi|28188607|gb|AAN46229.1| unknown protein [Arabidopsis
thaliana] gi|28188605|gb|AAN46228.1| unknown protein
[Arabidopsis thaliana] gi|28188603|gb|AAN46227.1|
unknown protein [Arabidopsis thaliana]
gi|28188601|gb|AAN46226.1| unknown protein [Arabidopsis
thaliana] gi|28188599|gb|AAN46225.1| unknown protein
[Arabidopsis thaliana] gi|28188597|gb|AAN46224.1|
unknown protein [Arabidopsis thaliana]
gi|28188595|gb|AAN46223.1| unknown protein [Arabidopsis
thaliana]
Length = 415
Score = 577 bits (1486), Expect = e-163
Identities = 302/418 (72%), Positives = 346/418 (82%), Gaps = 24/418 (5%)
Query: 18 SRRSFDVKLTGHHHRGKSHGSV-------QDLHDQPLVIQNSCWANLPPELLFDVIRRLE 70
SRRSFD +L+ H +GK+ GS +DL P+++Q S WANLPPELLFDVI+RLE
Sbjct: 1 SRRSFDFRLSSLH-KGKAQGSSFREYSSSRDLLS-PVIVQTSRWANLPPELLFDVIKRLE 58
Query: 71 ESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGPRDGIIQCFIK 130
ESE+ WP+RKHVVACASVC+SWR MC++IV PE CGKLTFPVSLKQPGPRD +IQCFIK
Sbjct: 59 ESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIK 118
Query: 131 RDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKL 190
RDKS LT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDADNISRSSN+Y+GKL
Sbjct: 119 RDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKL 178
Query: 191 RSNFLGTKFIIYDTQ-PPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNIAQVTYELNV 249
RSNFLGTKF++YDTQ PP TS+ SR S++VSPKVPSGSYNIAQ+TYELNV
Sbjct: 179 RSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNV 238
Query: 250 LGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELI---HRSLEDSFRS-ISFSK-SLDH-S 303
LGTRGPR+MHCIM+SIP S+L+ GGSVP QPE + SL+DSFRS ISFSK S DH S
Sbjct: 239 LGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRS 298
Query: 304 IEFSSARFSEIGGSCNE-DDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQ 362
++FSS+RFSE+G SC++ +++ RPL+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 299 LDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQ 358
Query: 363 LIASTQP------PAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 414
L+A+ QP A APT S PA PE DK+ILQFGKVGKDMFTMDYRYPLSAFQAFA
Sbjct: 359 LVAARQPQPQGTGAAAAPT-SAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFA 415
>gb|AAN46232.1| unknown protein [Arabidopsis thaliana]
Length = 415
Score = 576 bits (1484), Expect = e-163
Identities = 301/418 (72%), Positives = 346/418 (82%), Gaps = 24/418 (5%)
Query: 18 SRRSFDVKLTGHHHRGKSHGSV-------QDLHDQPLVIQNSCWANLPPELLFDVIRRLE 70
SRRSFD +L+ H +GK+ GS +DL P+++Q S WANLPPELLFDVI+RLE
Sbjct: 1 SRRSFDFRLSSLH-KGKAQGSSFREYSSSRDLLS-PVIVQTSRWANLPPELLFDVIKRLE 58
Query: 71 ESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGPRDGIIQCFIK 130
ESE+ WP+RKHVVACASVC+SWR MC++IV PE CGK+TFPVSLKQPGPRD +IQCFIK
Sbjct: 59 ESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKITFPVSLKQPGPRDAMIQCFIK 118
Query: 131 RDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKL 190
RDKS LT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDADNISRSSN+Y+GKL
Sbjct: 119 RDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKL 178
Query: 191 RSNFLGTKFIIYDTQ-PPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNIAQVTYELNV 249
RSNFLGTKF++YDTQ PP TS+ SR S++VSPKVPSGSYNIAQ+TYELNV
Sbjct: 179 RSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNV 238
Query: 250 LGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELI---HRSLEDSFRS-ISFSK-SLDH-S 303
LGTRGPR+MHCIM+SIP S+L+ GGSVP QPE + SL+DSFRS ISFSK S DH S
Sbjct: 239 LGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRS 298
Query: 304 IEFSSARFSEIGGSCNE-DDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQ 362
++FSS+RFSE+G SC++ +++ RPL+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 299 LDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQ 358
Query: 363 LIASTQP------PAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 414
L+A+ QP A APT S PA PE DK+ILQFGKVGKDMFTMDYRYPLSAFQAFA
Sbjct: 359 LVAARQPQPQGTGAAAAPT-SAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFA 415
>gb|AAN46233.1| unknown protein [Arabidopsis thaliana]
Length = 415
Score = 575 bits (1482), Expect = e-163
Identities = 301/418 (72%), Positives = 346/418 (82%), Gaps = 24/418 (5%)
Query: 18 SRRSFDVKLTGHHHRGKSHGSV-------QDLHDQPLVIQNSCWANLPPELLFDVIRRLE 70
SRRSFD +L+ H +GK+ GS +DL P+++Q S WANLPPELLFDVI+RLE
Sbjct: 1 SRRSFDFRLSSLH-KGKAQGSSFREYSSSRDLLS-PVIVQTSRWANLPPELLFDVIKRLE 58
Query: 71 ESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGPRDGIIQCFIK 130
ESE+ WP+RKHVVACASVC+SWR MC++IV PE CGKLTFPVSLKQPGPRD +IQCFIK
Sbjct: 59 ESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIK 118
Query: 131 RDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKL 190
RDKS LT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDADNISRSSN+Y+GKL
Sbjct: 119 RDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKL 178
Query: 191 RSNFLGTKFIIYDTQ-PPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNIAQVTYELNV 249
RSNFLGTKF++YDTQ PP TS+ SR S++VSPKVPSGS+NIAQ+TYELNV
Sbjct: 179 RSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSFNIAQITYELNV 238
Query: 250 LGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELI---HRSLEDSFRS-ISFSK-SLDH-S 303
LGTRGPR+MHCIM+SIP S+L+ GGSVP QPE + SL+DSFRS ISFSK S DH S
Sbjct: 239 LGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRS 298
Query: 304 IEFSSARFSEIGGSCNE-DDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQ 362
++FSS+RFSE+G SC++ +++ RPL+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 299 LDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQ 358
Query: 363 LIASTQP------PAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 414
L+A+ QP A APT S PA PE DK+ILQFGKVGKDMFTMDYRYPLSAFQAFA
Sbjct: 359 LVAARQPQPQGTGAAAAPT-SAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFA 415
>gb|AAN46237.1| unknown protein [Arabidopsis lyrata] gi|28188621|gb|AAN46236.1|
unknown protein [Arabidopsis lyrata]
gi|28188619|gb|AAN46235.1| unknown protein [Arabidopsis
lyrata] gi|28188617|gb|AAN46234.1| unknown protein
[Arabidopsis lyrata]
Length = 413
Score = 574 bits (1479), Expect = e-162
Identities = 299/415 (72%), Positives = 344/415 (82%), Gaps = 20/415 (4%)
Query: 18 SRRSFDVKLTGHHHRGKSHGSV-------QDLHDQPLVIQNSCWANLPPELLFDVIRRLE 70
SRRSFD +L+ H +GK+ GS +DL P+++Q S WANLPPELLFDVI+RLE
Sbjct: 1 SRRSFDFRLSSLH-KGKAQGSSFREYSSSRDLLS-PVIVQTSRWANLPPELLFDVIKRLE 58
Query: 71 ESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGPRDGIIQCFIK 130
ESE+ WP+RKHVVACASVC+SWR MC++IV PE CGKLTFPVSLKQPGPRD +IQCFIK
Sbjct: 59 ESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIK 118
Query: 131 RDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKL 190
RDKS LT+HLFLCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDADNISRSSN+Y+GKL
Sbjct: 119 RDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKL 178
Query: 191 RSNFLGTKFIIYDTQ-PPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNIAQVTYELNV 249
RSNFLGTKF++YDTQ PP TS+ SR S++VSPKVPSGSYNIAQ+TYELNV
Sbjct: 179 RSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQITYELNV 238
Query: 250 LGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELI---HRSLEDSFRS-ISFSK-SLDH-S 303
LGTRGPR+MHCIM+SIP S+L+ GGSVP QPE + SL+DSFRS ISFSK S DH S
Sbjct: 239 LGTRGPRRMHCIMNSIPTSSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRS 298
Query: 304 IEFSSARFSEIGGSCNE-DDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQ 362
++FSS+RFSE+G SCN+ +++ RPL+LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQ
Sbjct: 299 LDFSSSRFSEMGISCNDNEEETSFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQ 358
Query: 363 LIAS--TQPPAGAPTP-SQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 414
L+A+ +QP P + PA PE DK+ILQFGKVGKDMFTMDYRYPLSAFQAFA
Sbjct: 359 LVAARPSQPQGTGTAPATAPAHPEQDKVILQFGKVGKDMFTMDYRYPLSAFQAFA 413
>dbj|BAA82866.1| tubby-like protein [Lemna paucicostata]
Length = 428
Score = 547 bits (1410), Expect = e-154
Identities = 295/442 (66%), Positives = 332/442 (74%), Gaps = 29/442 (6%)
Query: 1 MSFRSIVRDVRDSFGSLSRR-SFDVKLTG--HHHRGKSHGSVQDLHDQ-----PLVIQNS 52
MSFRSI+ DVRDS GS SRR +V+++G +HRG++ + D + P + Q S
Sbjct: 1 MSFRSILSDVRDSIGSFSRRRGAEVRISGVSDNHRGRNRVTAGDFPGEIGGEIPAIYQ-S 59
Query: 53 CWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFP 112
WA LPPELL DVI+RLEESE++WP+RKHVVACA+VC +WR MCK+IV PEFCGKLTFP
Sbjct: 60 RWAGLPPELLRDVIKRLEESESSWPARKHVVACAAVCTAWREMCKEIVSGPEFCGKLTFP 119
Query: 113 VSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVI 172
VSLKQPGPR+G IQCFIKRDKS YHLFL LSP L ENGKFLLS +R
Sbjct: 120 VSLKQPGPREGTIQCFIKRDKSKSRYHLFLGLSPTLPAENGKFLLSQSASRALPARNTSS 179
Query: 173 SMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICP-PGTGKTSRRFSKKVSP 231
+AD+ISRSS+TYIGKLRSNFLGTKFI++DTQPP + H P P +G+ SRRF KVSP
Sbjct: 180 PWNADDISRSSSTYIGKLRSNFLGTKFIMFDTQPP--TRHCRPAPSSGRVSRRFYSKVSP 237
Query: 232 KVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPE-LIHRSLEDS 290
KVPSG+Y IAQVTYELNVLG RGPR+MHC M+SIP+SALDAGG VP PE ++ RSLEDS
Sbjct: 238 KVPSGNYAIAQVTYELNVLGKRGPRRMHCTMNSIPSSALDAGGRVPAAPERILSRSLEDS 297
Query: 291 FRSISFSKSLDHSIEFSSARFSEIGGSC-----NEDDDGKMRPLVLKNKPPRWHEQLQCW 345
FRS+S SK L S+RFSE GG E D K PLVLKNK PRWHEQLQCW
Sbjct: 298 FRSVSLSKDL------GSSRFSEFGGEMEREEEEEGDRKKSGPLVLKNKAPRWHEQLQCW 351
Query: 346 CLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRY 405
CLNFRGRVTVASVKNFQLIA G T +Q EHDKIILQFGKVGKD FTMD RY
Sbjct: 352 CLNFRGRVTVASVKNFQLIAD-----GQATAAQAGASEHDKIILQFGKVGKDTFTMDNRY 406
Query: 406 PLSAFQAFAICLSSFDTKLACE 427
PLSAFQAFAICLSSFDTKLACE
Sbjct: 407 PLSAFQAFAICLSSFDTKLACE 428
>gb|AAD39275.1| Hypothetical protein [Arabidopsis thaliana] gi|25405122|pir||F96499
hypothetical protein T10P12.9 [imported] - Arabidopsis
thaliana
Length = 415
Score = 509 bits (1312), Expect = e-143
Identities = 273/442 (61%), Positives = 330/442 (73%), Gaps = 42/442 (9%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGH--HHRGKSHGSVQDLHDQPLVIQNSCWANLP 58
MSF SIVRDVRD+ GS SRRSFDV+++ H R KSHG + D +VI+N+ WANLP
Sbjct: 1 MSFLSIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHGVEAHIEDL-IVIKNTRWANLP 59
Query: 59 PELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQP 118
LL DV+++L+ESE+TWP+R SW + + + + + +P
Sbjct: 60 AALLRDVMKKLDESESTWPAR-----------SWFRYS---LLPFDIMSVILTTLLMVKP 105
Query: 119 GPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADN 178
GPRDGIIQC+IKRDKSN+TYHL+L LSPA+LVE+GKFLLSAKR+RR TYTEYVISMDADN
Sbjct: 106 GPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADN 165
Query: 179 ISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPSGS 237
ISRSS+TYIGKL+SNFLGTKFI+YDT P S+ I P SR F SKKVSPKVPSGS
Sbjct: 166 ISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSP--PNRSRSFNSKKVSPKVPSGS 223
Query: 238 YNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFS 297
YNIAQVTYELN+LGTRGPR+M+CIMHSIP+ AL+ GG+VP QPE + RSL++SFRSI S
Sbjct: 224 YNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQRSLDESFRSIGSS 283
Query: 298 KSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 357
K ++HS +F+ + +++GK+RPLVLK KPPRW + L+CWCLNF+GRVTVAS
Sbjct: 284 KIVNHSGDFTRPK----------EEEGKVRPLVLKTKPPRWLQPLRCWCLNFKGRVTVAS 333
Query: 358 VKNFQLI--ASTQPPAGAP----------TPSQPAPPEHDKIILQFGKVGKDMFTMDYRY 405
VKNFQL+ A+ QP +G+ +P QP HDKIIL FGKVGKDMFTMDYRY
Sbjct: 334 VKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKDMFTMDYRY 393
Query: 406 PLSAFQAFAICLSSFDTKLACE 427
PLSAFQAFAI LS+FDTKLACE
Sbjct: 394 PLSAFQAFAISLSTFDTKLACE 415
>gb|AAM20254.1| putative tubby protein [Arabidopsis thaliana]
gi|18377640|gb|AAL66970.1| putative tubby protein
[Arabidopsis thaliana] gi|27372514|gb|AAK98802.1|
tubby-like protein 3 [Arabidopsis thaliana]
gi|30690823|ref|NP_850481.1| F-box family protein /
tubby family protein [Arabidopsis thaliana]
Length = 406
Score = 477 bits (1227), Expect = e-133
Identities = 245/432 (56%), Positives = 315/432 (72%), Gaps = 31/432 (7%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 60
MSF+S+++D+R GS+SR+ FDV+ + R +S VQD + SCWA++PPE
Sbjct: 1 MSFKSLIQDMRGELGSISRKGFDVRFG--YGRSRSQRVVQDTSVPVDAFKQSCWASMPPE 58
Query: 61 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 120
LL DV+ R+E+SE+TWPSRK+VV+CA VC++WR + K+IVR PE KLTFP+SLKQPGP
Sbjct: 59 LLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGP 118
Query: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 180
R ++QC+I R++SN TY+L+L L+ A ++GKFLL+AKR RR T T+Y+IS++ D++S
Sbjct: 119 RGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVS 178
Query: 181 RSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFS-----KKVSPKVPS 235
R SNTYIGKLRSNFLGTKF +YD QP PGT T R S K+VSP++PS
Sbjct: 179 RGSNTYIGKLRSNFLGTKFTVYDAQP-------TNPGTQVTRTRSSRLLSLKQVSPRIPS 231
Query: 236 GSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSIS 295
G+Y +A ++YELNVLG+RGPR+M C+M +IP SA++ GG+ P Q EL+H +L DSF S S
Sbjct: 232 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNL-DSFPSFS 290
Query: 296 FSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTV 355
F +S SI S G S +G LVLKNK PRWHEQLQCWCLNF GRVTV
Sbjct: 291 FFRS--KSIRAESL---PSGPSSAAQKEGL---LVLKNKAPRWHEQLQCWCLNFNGRVTV 342
Query: 356 ASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 415
ASVKNFQL+A+ + + PA PEH+ +ILQFGKVGKD+FTMDY+YP+SAFQAF I
Sbjct: 343 ASVKNFQLVAAPE--------NGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTI 394
Query: 416 CLSSFDTKLACE 427
CLSSFDTK+ACE
Sbjct: 395 CLSSFDTKIACE 406
>gb|AAM15124.1| putative tubby protein [Arabidopsis thaliana]
gi|3738302|gb|AAC63644.1| putative tubby protein
[Arabidopsis thaliana] gi|25409071|pir||H84920 probable
Tub family protein [imported] - Arabidopsis thaliana
Length = 407
Score = 473 bits (1217), Expect = e-132
Identities = 245/433 (56%), Positives = 315/433 (72%), Gaps = 32/433 (7%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 60
MSF+S+++D+R GS+SR+ FDV+ + R +S VQD + SCWA++PPE
Sbjct: 1 MSFKSLIQDMRGELGSISRKGFDVRFG--YGRSRSQRVVQDTSVPVDAFKQSCWASMPPE 58
Query: 61 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 120
LL DV+ R+E+SE+TWPSRK+VV+CA VC++WR + K+IVR PE KLTFP+SLKQPGP
Sbjct: 59 LLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGP 118
Query: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLV-ENGKFLLSAKRTRRTTYTEYVISMDADNI 179
R ++QC+I R++SN TY+L+L L+ A ++GKFLL+AKR RR T T+Y+IS++ D++
Sbjct: 119 RGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDV 178
Query: 180 SRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFS-----KKVSPKVP 234
SR SNTYIGKLRSNFLGTKF +YD QP PGT T R S K+VSP++P
Sbjct: 179 SRGSNTYIGKLRSNFLGTKFTVYDAQP-------TNPGTQVTRTRSSRLLSLKQVSPRIP 231
Query: 235 SGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSI 294
SG+Y +A ++YELNVLG+RGPR+M C+M +IP SA++ GG+ P Q EL+H +L DSF S
Sbjct: 232 SGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNL-DSFPSF 290
Query: 295 SFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVT 354
SF +S SI S G S +G LVLKNK PRWHEQLQCWCLNF GRVT
Sbjct: 291 SFFRS--KSIRAESL---PSGPSSAAQKEGL---LVLKNKAPRWHEQLQCWCLNFNGRVT 342
Query: 355 VASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFA 414
VASVKNFQL+A+ + + PA PEH+ +ILQFGKVGKD+FTMDY+YP+SAFQAF
Sbjct: 343 VASVKNFQLVAAPE--------NGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFT 394
Query: 415 ICLSSFDTKLACE 427
ICLSSFDTK+ACE
Sbjct: 395 ICLSSFDTKIACE 407
>ref|XP_467371.1| putative tubby-like protein [Oryza sativa (japonica
cultivar-group)] gi|41053094|dbj|BAD08037.1| putative
tubby-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 428
Score = 453 bits (1165), Expect = e-126
Identities = 242/445 (54%), Positives = 308/445 (68%), Gaps = 35/445 (7%)
Query: 1 MSFRSIVRDVR---DSFGSLSRRSFDVKLTGHHHRGKSHGS-------------VQDLHD 44
MS +SIVR++R D GS+SRR+ D + G RG S S Q L
Sbjct: 1 MSLKSIVRELREMRDGIGSMSRRAADGRAGGG--RGGSRHSWPVLWSEQQQPPQQQQLQR 58
Query: 45 QPLVIQNSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPE 104
Q Q WANLPPELL DVI+R+E SE TWP+R+ VVACA+VC+SWR + K++V++ E
Sbjct: 59 QEHQQQQGRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLE 118
Query: 105 FCGKLTFPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRR 164
CG++TFP+SLKQPGPR+ +QCF++RD++ TY L+L LSP+L EN K LL+A++ RR
Sbjct: 119 ECGRITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRR 178
Query: 165 TTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRR 224
T T +VIS+ +++ S SS+TY+GKL+ NFLGTKF I+D+QPPC A + P + S+R
Sbjct: 179 ATRTSFVISLVSNDFSLSSSTYVGKLKPNFLGTKFTIFDSQPPC-DAVVLP--NNRPSKR 235
Query: 225 FSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIH 284
K+VSP++P G+YN+A V+YEL VL RGPR+M C MHSIP + GG P +IH
Sbjct: 236 HFKQVSPRLPLGNYNVATVSYELTVLRNRGPRRMQCTMHSIPALCIQEGGKAPTPTGIIH 295
Query: 285 RSLEDSFRSISFSKSLDHSIEFSSARFSE--IGGSCNEDDDGKMRPLVLKNKPPRWHEQL 342
SL++ ++S SK + +IEFSS S G C + PLVLKNK PRWHEQL
Sbjct: 296 -SLDEQVPALSTSKGKEPAIEFSSTSLSADLSGPVCTNE-----VPLVLKNKAPRWHEQL 349
Query: 343 QCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMD 402
QCWCLNFRGRVTVASVKNFQL+AS P G P E +K+ILQFGK+GKD+FTMD
Sbjct: 350 QCWCLNFRGRVTVASVKNFQLVASVDPSLGIPA------AEQEKVILQFGKIGKDIFTMD 403
Query: 403 YRYPLSAFQAFAICLSSFDTKLACE 427
YRYPLSAFQAFAICL+SFDTK ACE
Sbjct: 404 YRYPLSAFQAFAICLTSFDTKPACE 428
>ref|NP_910978.1| putative tubby related protein [Oryza sativa (japonica
cultivar-group)] gi|51963628|ref|XP_506548.1| PREDICTED
P0450A04.117 gene product [Oryza sativa (japonica
cultivar-group)] gi|23495868|dbj|BAC20077.1| putative
tubby related protein [Oryza sativa (japonica
cultivar-group)]
Length = 406
Score = 441 bits (1135), Expect = e-122
Identities = 231/430 (53%), Positives = 300/430 (69%), Gaps = 27/430 (6%)
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHR--GKSHGSVQDLHDQPLVIQNSCWANLP 58
MSFRS++++V+ G++SRR F + G R + + LV++ SCW LP
Sbjct: 1 MSFRSVIQEVKGEIGAISRRGFRSR-PGRVRRVAAAAEEPPDESSAAALVMRESCWTQLP 59
Query: 59 PELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQP 118
PELL +V+ R+EESE WP R+ VVACA VC+SWR + ++IVR+PE G LTFP+SLKQP
Sbjct: 60 PELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQP 119
Query: 119 GPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADN 178
GPRD ++CFI R+++ TY+L++ L+ A L ++GKFLL+A++ RRTT TEY+IS+D ++
Sbjct: 120 GPRDAPMKCFIVRNRTTQTYYLYIGLTDA-LTDDGKFLLAARKCRRTTCTEYLISLDMND 178
Query: 179 ISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPSGS 237
IS+ +++Y+GKLRSNFLGTKF IYD PP I G+++R S +SP++P+G+
Sbjct: 179 ISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVI---SKGQSARVIGSNHLSPRIPAGN 235
Query: 238 YNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFS 297
Y ++ ++YELNVLG+RGPR+MHC M SIP SA++ GG+ P Q E S +SF SI F
Sbjct: 236 YPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTE-FPLSYHESFTSIPFF 294
Query: 298 KSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 357
KS S+A GS LVLKNK PRWHE LQCWCLNF GRVTVAS
Sbjct: 295 KSKSVRANNSTASLLTQNGS----------KLVLKNKSPRWHEHLQCWCLNFHGRVTVAS 344
Query: 358 VKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICL 417
VKNFQL+AS + S P EHD +ILQFGKVGKDMFTMDYRYP+SAFQAFAICL
Sbjct: 345 VKNFQLVASDE--------SNPTNQEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICL 396
Query: 418 SSFDTKLACE 427
SSFDTK+ACE
Sbjct: 397 SSFDTKIACE 406
>gb|AAX95105.1| Tub family, putative [Oryza sativa (japonica cultivar-group)]
Length = 317
Score = 416 bits (1070), Expect = e-115
Identities = 215/319 (67%), Positives = 252/319 (78%), Gaps = 18/319 (5%)
Query: 125 IQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSN 184
+QCFI+RDKS TY+L+L L A+LV+NGKFLLSAKR T TEYVISM+A+N+SRS+N
Sbjct: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
Query: 185 TYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNIAQVT 244
T IGKLRSNFLGTKF+IYDT P + +GKTSRRFS K + K P +Y+IA ++
Sbjct: 61 TNIGKLRSNFLGTKFVIYDTHTPYNAT--SDSQSGKTSRRFSNKGTAKHPCSTYSIANIS 118
Query: 245 YELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPE--LIHRSLEDSFRSISFSKS--L 300
YELNV GTRGPR+M C+MHSIP S+L+AGG+VP QP+ L H E SFRS+SFSKS +
Sbjct: 119 YELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSVM 178
Query: 301 DHSIEFSSARFSEI---------GGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRG 351
DHS+ FSSA+FS+I G ++D++ K PL+L+NK PRWHEQLQCWCLNFRG
Sbjct: 179 DHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRG 238
Query: 352 RVTVASVKNFQLIASTQPPAGAPTPSQPA---PPEHDKIILQFGKVGKDMFTMDYRYPLS 408
RVTVASVKNFQLIA+TQP AGAPTPSQP PPEHDK+ILQFGKV KDMFTMDY YPLS
Sbjct: 239 RVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLS 298
Query: 409 AFQAFAICLSSFDTKLACE 427
AFQAFAI LSSFDTKLACE
Sbjct: 299 AFQAFAISLSSFDTKLACE 317
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 784,351,269
Number of Sequences: 2540612
Number of extensions: 35147157
Number of successful extensions: 96333
Number of sequences better than 10.0: 167
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 95712
Number of HSP's gapped (non-prelim): 244
length of query: 427
length of database: 863,360,394
effective HSP length: 131
effective length of query: 296
effective length of database: 530,540,222
effective search space: 157039905712
effective search space used: 157039905712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)
Medicago: description of AC136472.10