BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136142.6 + phase: 0
(147 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB08466.1| unnamed protein product [Arabidopsis thaliana] g... 152 2e-36
gb|AAL73441.1| telomere repeat binding factor 2 [Arabidopsis tha... 152 2e-36
emb|CAB66923.1| MYB-like protein [Arabidopsis thaliana] gi|18958... 132 1e-30
gb|AAP80178.1| At1g49950 [Arabidopsis thaliana] gi|18478312|gb|A... 130 9e-30
gb|AAM65540.1| DNA-binding protein PcMYB1, putative [Arabidopsis... 130 9e-30
gb|AAF76448.1| Contains similarity to DNA-binding protein MYB1 f... 130 9e-30
gb|AAL73438.1| telomere repeat binding factor 1 [Arabidopsis tha... 130 9e-30
ref|NP_917454.1| putative telomere repeat binding factor [Oryza ... 124 5e-28
gb|AAQ62069.1| single myb histone 6 [Zea mays] 120 7e-27
gb|AAQ01754.1| single myb histone 1 [Zea mays] 118 3e-26
gb|AAQ62067.1| single myb histone 5 [Zea mays] 114 5e-25
dbj|BAD11355.1| BRI1-KD interacting protein 127 [Oryza sativa (j... 107 8e-23
ref|NP_916567.1| histone H1-like protein [Oryza sativa (japonica... 105 2e-22
emb|CAD44620.1| MYB28 protein [Oryza sativa (japonica cultivar-g... 105 2e-22
gb|AAL73044.1| histone H1-like protein [Zea mays] 103 1e-21
gb|AAQ62068.1| Single myb histone 4 [Zea mays] 103 1e-21
gb|AAQ62066.1| single myb histone 3 [Zea mays] 100 7e-21
pir||T15038 DNA-binding protein MYB1 - parsley gi|2224899|gb|AAB... 95 4e-19
pir||T15037 DNA-binding protein MYB1 - parsley gi|2224897|gb|AAB... 95 4e-19
gb|AAB61700.1| PcMYB1 protein [Petroselinum crispum] 95 4e-19
>dbj|BAB08466.1| unnamed protein product [Arabidopsis thaliana]
gi|18655381|gb|AAL76146.1| AT5g67580/K9I9_15
[Arabidopsis thaliana] gi|18481428|gb|AAL73442.1|
telomere repeat binding factor 2 [Arabidopsis thaliana]
gi|15240783|ref|NP_201559.1| myb family transcription
factor [Arabidopsis thaliana]
gi|30698320|ref|NP_851286.1| myb family transcription
factor [Arabidopsis thaliana] gi|14532518|gb|AAK63987.1|
AT5g67580/K9I9_15 [Arabidopsis thaliana]
gi|41619064|gb|AAS10015.1| MYB transcription factor
[Arabidopsis thaliana]
Length = 299
Score = 152 bits (383), Expect = 2e-36
Identities = 76/114 (66%), Positives = 86/114 (74%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEEAALKAGV+KHG GKWRTIL D EFS IL++RSNVDLKDKWRNI+VTA
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60
Query: 61 IWGSRQKAKLALKNSPPAPKTDNNQLALGKVVQREDFLDIKPLTISGGTFQSPK 114
+WGSR+KAKLALK +PP K D+N AL V D KP + G SP+
Sbjct: 61 LWGSRKKAKLALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPR 114
>gb|AAL73441.1| telomere repeat binding factor 2 [Arabidopsis thaliana]
Length = 299
Score = 152 bits (383), Expect = 2e-36
Identities = 76/114 (66%), Positives = 86/114 (74%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEEAALKAGV+KHG GKWRTIL D EFS IL++RSNVDLKDKWRNI+VTA
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDSEFSLILKSRSNVDLKDKWRNISVTA 60
Query: 61 IWGSRQKAKLALKNSPPAPKTDNNQLALGKVVQREDFLDIKPLTISGGTFQSPK 114
+WGSR+KAKLALK +PP K D+N AL V D KP + G SP+
Sbjct: 61 LWGSRKKAKLALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPR 114
>emb|CAB66923.1| MYB-like protein [Arabidopsis thaliana]
gi|18958040|gb|AAL79593.1| AT3g49850/T16K5_200
[Arabidopsis thaliana] gi|18481424|gb|AAL73440.1|
telomere repeat binding factor 3 [Arabidopsis thaliana]
gi|18481422|gb|AAL73439.1| telomere repeat binding
factor 3 [Arabidopsis thaliana]
gi|18086498|gb|AAL57702.1| AT3g49850/T16K5_200
[Arabidopsis thaliana] gi|16604535|gb|AAL24273.1|
AT3g49850/T16K5_200 [Arabidopsis thaliana]
gi|15229625|ref|NP_190554.1| myb family transcription
factor [Arabidopsis thaliana]
gi|41619052|gb|AAS10012.1| MYB transcription factor
[Arabidopsis thaliana] gi|11358523|pir||T46051 MYB-like
protein - Arabidopsis thaliana
Length = 295
Score = 132 bits (333), Expect = 1e-30
Identities = 63/89 (70%), Positives = 75/89 (83%), Gaps = 1/89 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPK KWT EEE ALKAGV+KHG GKWRTIL DP +S+IL++RSNVDLKDKWRNI+VTA
Sbjct: 1 MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60
Query: 61 IWGSRQKAKLALKNSP-PAPKTDNNQLAL 88
+WGSR+KAKLALK +P + D+N A+
Sbjct: 61 LWGSRKKAKLALKRTPLSGSRQDDNATAI 89
>gb|AAP80178.1| At1g49950 [Arabidopsis thaliana] gi|18478312|gb|AAL73123.1|
telomere repeat binding factor 1 [Arabidopsis thaliana]
gi|18402853|ref|NP_564559.1| DNA-binding protein,
putative [Arabidopsis thaliana]
gi|42571815|ref|NP_973998.1| DNA-binding protein,
putative [Arabidopsis thaliana]
gi|30694688|ref|NP_849789.1| DNA-binding protein,
putative [Arabidopsis thaliana]
gi|17065320|gb|AAL32814.1| Unknown protein [Arabidopsis
thaliana] gi|41619040|gb|AAS10009.1| MYB transcription
factor [Arabidopsis thaliana]
Length = 300
Score = 130 bits (326), Expect = 9e-30
Identities = 62/97 (63%), Positives = 77/97 (78%), Gaps = 1/97 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEE+ALK+GV+KHG GKWRTIL DPEFS +L RSNVDLKDKWRN++V A
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 I-WGSRQKAKLALKNSPPAPKTDNNQLALGKVVQRED 96
WGSR+K++LA+K + PK + N LAL +Q ++
Sbjct: 61 NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDE 97
>gb|AAM65540.1| DNA-binding protein PcMYB1, putative [Arabidopsis thaliana]
Length = 300
Score = 130 bits (326), Expect = 9e-30
Identities = 62/97 (63%), Positives = 77/97 (78%), Gaps = 1/97 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEE+ALK+GV+KHG GKWRTIL DPEFS +L RSNVDLKDKWRN++V A
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 I-WGSRQKAKLALKNSPPAPKTDNNQLALGKVVQRED 96
WGSR+K++LA+K + PK + N LAL +Q ++
Sbjct: 61 NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDE 97
>gb|AAF76448.1| Contains similarity to DNA-binding protein MYB1 from Petroselinum
crispum gi|7488946 and contains MYB-DNA-binding
PF|00249 and linker-Histone PF|00538 domains.
[Arabidopsis thaliana] gi|25405344|pir||H96535
hypothetical protein F2J10.16 [imported] - Arabidopsis
thaliana
Length = 318
Score = 130 bits (326), Expect = 9e-30
Identities = 62/97 (63%), Positives = 77/97 (78%), Gaps = 1/97 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEE+ALK+GV+KHG GKWRTIL DPEFS +L RSNVDLKDKWRN++V A
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 I-WGSRQKAKLALKNSPPAPKTDNNQLALGKVVQRED 96
WGSR+K++LA+K + PK + N LAL +Q ++
Sbjct: 61 NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDE 97
>gb|AAL73438.1| telomere repeat binding factor 1 [Arabidopsis thaliana]
Length = 300
Score = 130 bits (326), Expect = 9e-30
Identities = 62/97 (63%), Positives = 77/97 (78%), Gaps = 1/97 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEE+ALK+GV+KHG GKWRTIL DPEFS +L RSNVDLKDKWRN++V A
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 I-WGSRQKAKLALKNSPPAPKTDNNQLALGKVVQRED 96
WGSR+K++LA+K + PK + N LAL +Q ++
Sbjct: 61 NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDE 97
>ref|NP_917454.1| putative telomere repeat binding factor [Oryza sativa (japonica
cultivar-group)] gi|20146249|dbj|BAB89031.1| putative
single myb histone 6 [Oryza sativa (japonica
cultivar-group)]
Length = 297
Score = 124 bits (311), Expect = 5e-28
Identities = 59/81 (72%), Positives = 70/81 (85%), Gaps = 1/81 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQ+WTAEEEAALKAGV KHG GKWRTIL DPEF+++LR RSNVDLKDKWRN++VTA
Sbjct: 1 MGAPKQRWTAEEEAALKAGVAKHGTGKWRTILRDPEFTALLRLRSNVDLKDKWRNLSVTA 60
Query: 61 -IWGSRQKAKLALKNSPPAPK 80
+GSR++A++ALK PK
Sbjct: 61 GGYGSRERARVALKGGKRGPK 81
>gb|AAQ62069.1| single myb histone 6 [Zea mays]
Length = 298
Score = 120 bits (301), Expect = 7e-27
Identities = 61/106 (57%), Positives = 77/106 (72%), Gaps = 3/106 (2%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINV-T 59
MGAPKQ+WT+EEEAAL+AG+ +HG GKWRTIL DPEFSS L RSNVDLKDKWRN+NV
Sbjct: 1 MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIV 60
Query: 60 AIWGSRQKAKLALKNSPPAPKTDNNQLALGKVVQ--REDFLDIKPL 103
+ SR KAK ALK PK + + +A+ +V ++ +D KP+
Sbjct: 61 STSSSRDKAKSALKRIRTIPKNNEHTMAITRVTSDIDDEIVDEKPI 106
>gb|AAQ01754.1| single myb histone 1 [Zea mays]
Length = 299
Score = 118 bits (295), Expect = 3e-26
Identities = 64/132 (48%), Positives = 87/132 (65%), Gaps = 10/132 (7%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQ+WT EEEAALKAGV KHG GKWRTIL D +FS++LR RSNVDLKDKWRN++VTA
Sbjct: 1 MGAPKQRWTPEEEAALKAGVAKHGPGKWRTILRDSDFSALLRLRSNVDLKDKWRNLSVTA 60
Query: 61 -IWGSRQKAKLALKNSPPAPKTDNNQLALGKVVQREDFLDIKPLTISGGTFQSPKPLTIC 119
+GSR+KA++ALK + + K+ +D+K + + T +PL +
Sbjct: 61 GGYGSREKARMALK---------KGRRVVPKLTAEPMDVDVKDMDDAHDTAIDVEPLAMA 111
Query: 120 SGTLQSPNSKEQ 131
+L + S ++
Sbjct: 112 FESLPTEESPDK 123
>gb|AAQ62067.1| single myb histone 5 [Zea mays]
Length = 286
Score = 114 bits (285), Expect = 5e-25
Identities = 55/106 (51%), Positives = 74/106 (68%), Gaps = 3/106 (2%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQ+WT+EEEAAL+AGV +HG G WR IL DPE SS LR RSNVDLKDKWRN+NV
Sbjct: 1 MGAPKQRWTSEEEAALRAGVARHGVGNWRMILNDPELSSTLRYRSNVDLKDKWRNMNVIV 60
Query: 61 IWGS-RQKAKLALKNSPPAPKTDNNQLALGKVVQR--EDFLDIKPL 103
S R + + + + + APK ++ LA+ + ++ +D+KP+
Sbjct: 61 TSSSTRDRGRTSTRRTRAAPKNNDQLLAMSTITSEVDDEIVDVKPI 106
>dbj|BAD11355.1| BRI1-KD interacting protein 127 [Oryza sativa (japonica
cultivar-group)]
Length = 292
Score = 107 bits (266), Expect = 8e-23
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 17/134 (12%)
Query: 6 QKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA-IWGS 64
QKWTAEEE+ALKAG+ KHGAGKWRTIL DP+FS++LR RSNVDLKDKWRN+NVT G+
Sbjct: 1 QKWTAEEESALKAGIAKHGAGKWRTILKDPDFSNVLRYRSNVDLKDKWRNMNVTVNASGA 60
Query: 65 RQKAKLALKNSP-PAPKTDNNQLALGKVVQREDFLDIKPLTISGGTFQSPKPLTICSGTL 123
R + K + P APK + + + I +T S G +P+ + + T
Sbjct: 61 RDRVKAPVVKKPRSAPKHEGHSTSTA----------IAAVT-SDGDDDVAEPVPLATST- 108
Query: 124 QSPNSKEQVSRFKN 137
+SK +SR N
Sbjct: 109 ---SSKRSLSRLDN 119
>ref|NP_916567.1| histone H1-like protein [Oryza sativa (japonica cultivar-group)]
Length = 306
Score = 105 bits (263), Expect = 2e-22
Identities = 51/89 (57%), Positives = 65/89 (72%), Gaps = 1/89 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT+EEE AL+ GV+KHG GKWRTI DPEFS +L +RSN+DLKDKWRN++ +A
Sbjct: 1 MGAPKQKWTSEEEEALRRGVLKHGPGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSA 60
Query: 61 I-WGSRQKAKLALKNSPPAPKTDNNQLAL 88
GSR K K+ P + + ++Q L
Sbjct: 61 SGLGSRDKLKVPRIKGPSSSTSPSSQTPL 89
>emb|CAD44620.1| MYB28 protein [Oryza sativa (japonica cultivar-group)]
Length = 304
Score = 105 bits (263), Expect = 2e-22
Identities = 51/89 (57%), Positives = 65/89 (72%), Gaps = 1/89 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT+EEE AL+ GV+KHG GKWRTI DPEFS +L +RSN+DLKDKWRN++ +A
Sbjct: 1 MGAPKQKWTSEEEEALRRGVLKHGPGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSA 60
Query: 61 I-WGSRQKAKLALKNSPPAPKTDNNQLAL 88
GSR K K+ P + + ++Q L
Sbjct: 61 SGLGSRDKLKVPRIKGPSSSTSPSSQTPL 89
>gb|AAL73044.1| histone H1-like protein [Zea mays]
Length = 288
Score = 103 bits (256), Expect = 1e-21
Identities = 48/85 (56%), Positives = 62/85 (72%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT+EEE AL+AGV KHGAGKWRTI DPEFS +L +RSN+DLKDKWRN++ +A
Sbjct: 1 MGAPKQKWTSEEEDALRAGVRKHGAGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSA 60
Query: 61 IWGSRQKAKLALKNSPPAPKTDNNQ 85
K ++ P + + ++Q
Sbjct: 61 SGLGSSKLRVPKITGPSSSPSSSSQ 85
>gb|AAQ62068.1| Single myb histone 4 [Zea mays]
Length = 288
Score = 103 bits (256), Expect = 1e-21
Identities = 48/85 (56%), Positives = 62/85 (72%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT+EEE AL+AGV KHGAGKWRTI DPEFS +L +RSN+DLKDKWRN++ +A
Sbjct: 1 MGAPKQKWTSEEEDALRAGVRKHGAGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSA 60
Query: 61 IWGSRQKAKLALKNSPPAPKTDNNQ 85
K ++ P + + ++Q
Sbjct: 61 SGLGSSKLRVPKITGPSSSPSSSSQ 85
>gb|AAQ62066.1| single myb histone 3 [Zea mays]
Length = 285
Score = 100 bits (249), Expect = 7e-21
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MGAPKQKWT+EEE AL+ GV KHGAGKWRTI DP+FS IL +RSN+DLKDKWRN++ +A
Sbjct: 1 MGAPKQKWTSEEEDALRRGVRKHGAGKWRTIQKDPQFSPILSSRSNIDLKDKWRNLSFSA 60
Query: 61 IWGSRQKAKL-ALKNSPPAPKTDNNQLAL 88
K ++ + S +P + + L L
Sbjct: 61 SGLGSSKVRVPKITGSSSSPSSSSQALLL 89
>pir||T15038 DNA-binding protein MYB1 - parsley gi|2224899|gb|AAB61699.1|
DNA-binding protein PcMYB1 [Petroselinum crispum]
Length = 307
Score = 94.7 bits (234), Expect = 4e-19
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MG KQKWTAEEE ALKAGV KHG GKW+TIL+DP+F++ L RSN+DLKDKWRN+ +
Sbjct: 12 MGNHKQKWTAEEEEALKAGVKKHGMGKWKTILVDPDFATALTHRSNIDLKDKWRNLGI-- 69
Query: 61 IWGSRQKAKLALKNSPPAPKTDNNQLAL 88
S A K+ P N A+
Sbjct: 70 ---SSSAAAQVSKDKSPVLSITNGSAAI 94
>pir||T15037 DNA-binding protein MYB1 - parsley gi|2224897|gb|AAB61698.1|
DNA-binding protein PcMYB1 [Petroselinum crispum]
Length = 307
Score = 94.7 bits (234), Expect = 4e-19
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MG KQKWTAEEE ALKAGV KHG GKW+TIL+DP+F++ L RSN+DLKDKWRN+ +
Sbjct: 12 MGNHKQKWTAEEEEALKAGVKKHGMGKWKTILVDPDFATALTHRSNIDLKDKWRNLGI-- 69
Query: 61 IWGSRQKAKLALKNSPPAPKTDNNQLAL 88
S A K+ P N A+
Sbjct: 70 ---SSSTAAQVSKDKSPVLSITNGSAAI 94
>gb|AAB61700.1| PcMYB1 protein [Petroselinum crispum]
Length = 213
Score = 94.7 bits (234), Expect = 4e-19
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILMDPEFSSILRTRSNVDLKDKWRNINVTA 60
MG KQKWTAEEE ALKAGV KHG GKW+TIL+DP+F++ L RSN+DLKDKWRN+ +
Sbjct: 12 MGNHKQKWTAEEEEALKAGVKKHGMGKWKTILVDPDFATALTHRSNIDLKDKWRNLGI-- 69
Query: 61 IWGSRQKAKLALKNSPPAPKTDNNQLAL 88
S A K+ P N A+
Sbjct: 70 ---SSSAAAQVSKDKSPVLSITNGSAAI 94
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.130 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,687,153
Number of Sequences: 2540612
Number of extensions: 10003915
Number of successful extensions: 18607
Number of sequences better than 10.0: 666
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 18016
Number of HSP's gapped (non-prelim): 733
length of query: 147
length of database: 863,360,394
effective HSP length: 123
effective length of query: 24
effective length of database: 550,865,118
effective search space: 13220762832
effective search space used: 13220762832
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Medicago: description of AC136142.6