BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135848.10 - phase: 0
(346 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum] 361 2e-98
emb|CAD43141.1| cyclin D2 [Daucus carota] 342 7e-93
emb|CAA71244.1| cyclin-D like protein [Chenopodium rubrum] gi|74... 295 1e-78
gb|AAS13370.1| cyclin d2 [Glycine max] 293 4e-78
gb|AAV28532.1| D-type cyclin [Saccharum officinarum] 287 3e-76
dbj|BAB11564.1| D-type cyclin [Arabidopsis thaliana] gi|15238462... 278 2e-73
gb|AAM60963.1| D-type cyclin [Arabidopsis thaliana] 276 5e-73
emb|CAB41347.1| D-type cyclin [Arabidopsis thaliana] 276 6e-73
gb|AAL83926.1| D-type cyclin [Zea mays] 276 8e-73
emb|CAA58286.1| cyclin delta-2 [Arabidopsis thaliana] gi|4544444... 269 8e-71
ref|XP_450928.1| cyclin [Oryza sativa (japonica cultivar-group)]... 268 2e-70
pir||S51651 cyclin delta-2 - Arabidopsis thaliana 266 5e-70
gb|AAQ08041.1| cyclin D2 [Triticum aestivum] 263 7e-69
ref|XP_482973.1| putative D-type cyclin [Oryza sativa (japonica ... 263 7e-69
ref|NP_196606.3| cyclin family protein [Arabidopsis thaliana] gi... 253 6e-66
gb|AAL83928.1| D-type cyclin [Zea mays] 244 2e-63
ref|NP_914752.1| putative D-type cyclin [Oryza sativa (japonica ... 243 5e-63
emb|CAB89399.1| cyclin protein-like [Arabidopsis thaliana] gi|11... 242 1e-62
gb|AAV28533.1| D-type cyclin [Saccharum officinarum] 224 4e-57
ref|XP_470819.1| putative cyclin [Oryza sativa (japonica cultiva... 206 8e-52
>emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]
Length = 354
Score = 361 bits (927), Expect = 2e-98
Identities = 197/351 (56%), Positives = 256/351 (72%), Gaps = 14/351 (3%)
Query: 5 FDSAESNLLCSENNSTCFDDV---VVDDSGISPSWDHTNVNLDNVGSDSFLCFVAQSEEI 61
+D SNLLC+E S CFDDV + I + N + + S+ + + SEE
Sbjct: 7 YDFVASNLLCTETKSLCFDDVDSLTISQQNIETKSKDLSFN-NGIRSEPLIDLPSLSEEC 65
Query: 62 VKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLD 121
+ MV++E + LP++DY+ RLR GDLDLSVR+EALDWI KAH +YGFG LS CLS+NYLD
Sbjct: 66 LSFMVQREMEFLPKDDYVERLRSGDLDLSVRKEALDWILKAHMHYGFGELSFCLSINYLD 125
Query: 122 RFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMEL 181
RFLS+++ PR TWTVQLLAVAC SLAAKMEE+ VP +VDLQVG+PKFVF+ KTIQRMEL
Sbjct: 126 RFLSLYELPRSKTWTVQLLAVACLSLAAKMEEINVPLTVDLQVGDPKFVFEGKTIQRMEL 185
Query: 182 MILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSSE 241
++LS+L W+M+A TP +FIDYF+ K++ ++ P + LI+ S+QLIL+II+ IDFLEFRSSE
Sbjct: 186 LVLSTLKWRMQAYTPYTFIDYFMRKMNGDQIPSRPLISGSMQLILSIIRSIDFLEFRSSE 245
Query: 242 IAAAVAISLK-ELPTQEVDKAITDFFI-VDKERVLKCVELIRDLSLIKVGGNNFASFVPQ 299
IAA+VA+S+ E+ +++DKA+ FFI +DK RV KCVELI+DL+ + AS VPQ
Sbjct: 246 IAASVAMSVSGEIQAKDIDKAMPCFFIHLDKGRVQKCVELIQDLTTATITTAAAASLVPQ 305
Query: 300 SPIGVLD-AGCMSFKS-DELTNGSCPNSSHSSPNAKRMKFDGPS--SGTSQ 346
SPIGVL+ A C+S+KS DE T GSC SSH+ KR K D S GTS+
Sbjct: 306 SPIGVLEAAACLSYKSGDERTVGSCTTSSHT----KRRKLDTSSLEHGTSE 352
>emb|CAD43141.1| cyclin D2 [Daucus carota]
Length = 382
Score = 342 bits (878), Expect = 7e-93
Identities = 188/345 (54%), Positives = 244/345 (70%), Gaps = 16/345 (4%)
Query: 3 ESFDSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDS--FLCFVAQSEE 60
E F+ + +LLC+E N+ CFDD+ D P D NV VG++S +C V +
Sbjct: 9 EVFNMTDHSLLCTETNNLCFDDLEARDDQ-DPRIDCENV----VGNESEALICAVPLQRD 63
Query: 61 IVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYL 120
V V + K + E R G+LDL VR+EALDWI+KAHA+Y FG LS+CL+VNYL
Sbjct: 64 EDFVFVFESKVNFCPEVIFSTDRSGELDLCVRKEALDWIYKAHAHYNFGALSVCLAVNYL 123
Query: 121 DRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRME 180
DRFLS+++ P G WTVQLLAVAC SLAAKMEEV VP +VDLQV +PKFVF+AKTI+RME
Sbjct: 124 DRFLSLYELPSGKKWTVQLLAVACLSLAAKMEEVNVPLTVDLQVADPKFVFEAKTIKRME 183
Query: 181 LMILSSLGWKMRALTPCSFIDYFLAKI-SCEKYPDKSLIARSVQLILNIIKGIDFLEFRS 239
L++LS+L W+M+A TPCSFIDYFL KI + + P SLI RS+Q IL +KGIDFLEFR
Sbjct: 184 LLVLSTLKWRMQACTPCSFIDYFLRKINNADALPSGSLIDRSIQFILKTMKGIDFLEFRP 243
Query: 240 SEIAAAVAISL-KELPTQEVDKAITDFFIVDKERVLKCVELIRDLSLI----KVGGNNFA 294
SEI+AAVAI + +E T +++KA+++ V+K+RV KC+E+I+DL+L+ V
Sbjct: 244 SEISAAVAICVTREAQTLDINKAMSNIIPVEKDRVFKCIEMIQDLTLVTETSNVASGRTR 303
Query: 295 SFVPQSPIGVLDAGCMSFKSDELTNGSCPNSS---HSSPNAKRMK 336
+ VPQSP+GVLDA C+S+KSDE T GSCPNSS +SP+ KR K
Sbjct: 304 AQVPQSPVGVLDAACLSYKSDERTVGSCPNSSLHTETSPHTKRRK 348
>emb|CAA71244.1| cyclin-D like protein [Chenopodium rubrum] gi|7484663|pir||T09961
cyclin D-like protein - red goosefoot
Length = 372
Score = 295 bits (755), Expect = 1e-78
Identities = 185/378 (48%), Positives = 240/378 (62%), Gaps = 46/378 (12%)
Query: 1 MAESFDSAESNLLCSENNSTCFDDV------VVDDSGISP-SWDHTNVNLDNVGSDSFLC 53
MA SFD LLC+E+NS+ FD+V VVDD + + + NL N + +
Sbjct: 1 MAPSFD-----LLCAEDNSSIFDEVDDNYYGVVDDDVLQICNLQQQHGNLRNFDDFTLIL 55
Query: 54 ---------------FVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDW 98
F + E + + + E+ H DYL R R GDLDL R +DW
Sbjct: 56 LIIIKEHNFEALISGFFVANHECLASLFDNERQHFLGLDYLKRFRNGDLDLGARNLVIDW 115
Query: 99 IWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQ 158
I K ++Y FGPL + LSVNYLDRFLS ++ P G W +QLL VAC SLAAK++E VP
Sbjct: 116 IHKVQSHYNFGPLCVYLSVNYLDRFLSAYELP-GKAWMMQLLGVACLSLAAKVDETDVPL 174
Query: 159 SVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLI 218
+DLQV E KFVF+AKTIQRMEL++LS+L W+M+++TP SFIDYFL K+S +K P KSLI
Sbjct: 175 ILDLQVSESKFVFEAKTIQRMELLVLSTLKWRMQSVTPFSFIDYFLYKLSGDKMPSKSLI 234
Query: 219 ARSVQLILNIIKGIDFLEFRSSEIAAAVAISLKELPTQEV---DKA---ITDFFIVDKER 272
+++QLIL+ IKGID +EFR SEIAAAVAIS+ + TQ V DKA +TD V+KER
Sbjct: 235 FQAIQLILSTIKGIDLMEFRPSEIAAAVAISVTQ-QTQIVEFTDKAFSFLTDH--VEKER 291
Query: 273 VLKCVELIRDLSLIKVGGNNFAS-FVPQSPIGVLDA-GCMSFKSDELT---NGSCPNSSH 327
++KCVE++ DL + AS VPQSPIGVLDA C+S+KSD+ + +GSC NS+H
Sbjct: 292 LMKCVEIMHDLRMSSRSNGALASTSVPQSPIGVLDASACLSYKSDDTSTTPSGSCGNSAH 351
Query: 328 SSPNA----KRMKFDGPS 341
SSP + KR K D S
Sbjct: 352 SSPASAPPPKRRKLDRTS 369
>gb|AAS13370.1| cyclin d2 [Glycine max]
Length = 361
Score = 293 bits (751), Expect = 4e-78
Identities = 174/363 (47%), Positives = 237/363 (64%), Gaps = 35/363 (9%)
Query: 1 MAESFDSAESNLLCSENNSTCFDD------VVVDDSGI-----SPSWDHTNVNLDNVGSD 49
MA SFD A S+LLC+E+ ST FD+ ++ G+ SP H + D++
Sbjct: 1 MAPSFDFA-SSLLCTED-STVFDESHNNGGTIMTAMGVYEDTRSPRRPHFDEEPDDLP-- 56
Query: 50 SFLCFVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFG 109
S+E + +MVEKE H YL + + GDLD R EA+DWI K +++GFG
Sbjct: 57 ------LLSDESLVMMVEKECQHWSGLRYLNKFQTGDLDFGARMEAIDWIHKVRSHFGFG 110
Query: 110 PLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKF 169
PL LS+NYLDRFL ++ P+G WT+QLLAVAC SLAAK++E +VP S+DLQVGE KF
Sbjct: 111 PLCGYLSINYLDRFLFAYELPKGRVWTMQLLAVACVSLAAKLDETEVPLSLDLQVGESKF 170
Query: 170 VFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNII 229
+F+AKTIQRMEL++LS+L W+M+A+TP +F+DYFL KI+ ++ P +S I RS+QLI +
Sbjct: 171 LFEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTA 230
Query: 230 KGIDFLEFRSSEIAAAVAIS----------LKELPTQEVDKAITDFF-IVDKERVLKCVE 278
+GIDFLEF+ SEIAAAV S + E T + KAI+ V+KER+LKCV+
Sbjct: 231 RGIDFLEFKPSEIAAAVKPSEIAAAVAMYVMGETQTVDTGKAISVLIQHVEKERLLKCVQ 290
Query: 279 LIRDLSLIKVGGNNFASFV---PQSPIGVLDAGCMSFKSDELTNGSCPNSSHSSPNAKRM 335
+I++LS + ++ V PQSPIGVLDA C ++KSD+ SC NSSH+SP AKR
Sbjct: 291 MIQELSCNSGSAKDSSASVTCLPQSPIGVLDALCFNYKSDDTNASSCVNSSHNSPVAKRR 350
Query: 336 KFD 338
K +
Sbjct: 351 KLN 353
>gb|AAV28532.1| D-type cyclin [Saccharum officinarum]
Length = 343
Score = 287 bits (735), Expect = 3e-76
Identities = 160/334 (47%), Positives = 219/334 (64%), Gaps = 21/334 (6%)
Query: 4 SFDSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNL---DNVGSDSFLCFVAQSEE 60
S++ A S LLC+E++S+ D + + V L D + F SEE
Sbjct: 5 SYEMAASILLCAEDSSSILD--------LEAEAEEEEVMLARSSRTRGDPSVVFPVPSEE 56
Query: 61 IVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYL 120
V VE E H+PREDY RLRGG +DL VR +A+DWIWK HAYYGFGPL+ CL+VNYL
Sbjct: 57 CVAGFVEAEAAHMPREDYAERLRGGGMDLRVRMDAVDWIWKVHAYYGFGPLTACLAVNYL 116
Query: 121 DRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRME 180
DRFLS++Q P G WT QLL+VAC SLAAKMEE VP S+DLQ+G+ ++VF+AKTIQRME
Sbjct: 117 DRFLSLYQLPEGKAWTTQLLSVACLSLAAKMEETYVPPSLDLQIGDARYVFEAKTIQRME 176
Query: 181 LMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSS 240
L++LS+L W+M+A+TP S+IDYFL +++ P + + RS +LIL +G L+FR S
Sbjct: 177 LLVLSTLKWRMQAVTPFSYIDYFLHRLNGGDAPSRRAVLRSAELILCTARGTHCLDFRPS 236
Query: 241 EIAAAVAISLK-ELPTQEVDKAITDFFIVDKERVLKCVELIRDLSLIKVGGNNFASFVPQ 299
EIAAAVA ++ E ++DKA V KERV +C+E I+ + + + G VP+
Sbjct: 237 EIAAAVAAAVAGEEHAVDIDKACCT-HRVHKERVSRCLEAIQ--ATVALPGT-----VPR 288
Query: 300 SPIGVLD-AGCMSFKSDELTNGSCPNSSHSSPNA 332
SP GVLD AGC+S++SD+ + +SH+S ++
Sbjct: 289 SPTGVLDAAGCLSYRSDDTAVAAAAAASHASSSS 322
>dbj|BAB11564.1| D-type cyclin [Arabidopsis thaliana] gi|15238462|ref|NP_201345.1|
cyclin, putative [Arabidopsis thaliana]
Length = 308
Score = 278 bits (710), Expect = 2e-73
Identities = 160/323 (49%), Positives = 218/323 (66%), Gaps = 31/323 (9%)
Query: 1 MAESFDSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDSFLCFVAQSEE 60
MAE ++ E +LLC+E+N VDD G+ +++ +G ++SEE
Sbjct: 1 MAE--ENLELSLLCTESN--------VDDEGMIVDETPIEISIPQMGFSQ-----SESEE 45
Query: 61 IVKVMVEKEKDHLPREDYLIRLRGGDLDLSV-RREALDWIWKAHAYYGFGPLSLCLSVNY 119
I+ MVEKEK HLP +DY+ RLR GDLDL+V RR+AL+WIWKA + FGPL CL++NY
Sbjct: 46 IIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNY 105
Query: 120 LDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRM 179
LDRFLSV P G W +QLLAVAC SLAAK+EE +VP +DLQVG+P+FVF+AK++QRM
Sbjct: 106 LDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRM 165
Query: 180 ELMILSSLGWKMRALTPCSFIDYFLAKIS-CEKYPDKSLIARSVQLILNIIKGIDFLEFR 238
EL++L+ L W++RA+TPCS+I YFL K+S C++ P +LI+RS+Q+I + KGIDFLEFR
Sbjct: 166 ELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFR 225
Query: 239 SSEIAAAVAISLK-ELPTQEVDKAITD--FFIVDKERVLKCVELIRDLSLIKVGGNNFAS 295
SE+AAAVA+S+ EL D + F ++ KERV K E+I G++ S
Sbjct: 226 PSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIES------DGSDLCS 279
Query: 296 FVPQSPIGVLD--AGCMSFKSDE 316
Q+P GVL+ A C SFK+ +
Sbjct: 280 ---QTPNGVLEVSACCFSFKTHD 299
>gb|AAM60963.1| D-type cyclin [Arabidopsis thaliana]
Length = 308
Score = 276 bits (707), Expect = 5e-73
Identities = 158/323 (48%), Positives = 217/323 (66%), Gaps = 31/323 (9%)
Query: 1 MAESFDSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDSFLCFVAQSEE 60
MAE ++ E +LLC+E+N VDD G+ +++ +G ++SEE
Sbjct: 1 MAE--ENLELSLLCTESN--------VDDEGMIVDETPIEISIPQMGFSQ-----SESEE 45
Query: 61 IVKVMVEKEKDHLPREDYLIRLRGGDLDLSV-RREALDWIWKAHAYYGFGPLSLCLSVNY 119
I+ MVEKEK HLP +DY+ RLR GDLDL+V RR+AL+WIWKA + FGPL CL++NY
Sbjct: 46 IIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNY 105
Query: 120 LDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRM 179
LDRFLSV P G W +QLLAVAC SLAAK+EE +VP +DLQVG+P+FVF+AK++QRM
Sbjct: 106 LDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRM 165
Query: 180 ELMILSSLGWKMRALTPCSFIDYFLAKIS-CEKYPDKSLIARSVQLILNIIKGIDFLEFR 238
EL++L+ L W++RA+TPCS+I YFL K+S C++ P +LI+RS+Q+I + KGIDFLEFR
Sbjct: 166 ELLVLNRLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFR 225
Query: 239 SSEIAAAVAISLK-ELPTQEVDKAITD--FFIVDKERVLKCVELIRDLSLIKVGGNNFAS 295
SE+AAAVA+S+ EL D + F ++ KERV K E+I ++ +
Sbjct: 226 PSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIE---------SDGSD 276
Query: 296 FVPQSPIGVLD--AGCMSFKSDE 316
Q+P GVL+ A C SFK+ +
Sbjct: 277 LFSQTPNGVLEVSACCFSFKTHD 299
>emb|CAB41347.1| D-type cyclin [Arabidopsis thaliana]
Length = 308
Score = 276 bits (706), Expect = 6e-73
Identities = 160/323 (49%), Positives = 217/323 (66%), Gaps = 31/323 (9%)
Query: 1 MAESFDSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDSFLCFVAQSEE 60
MAE ++ E +LLC+E+N VDD G+ +++ +G ++SEE
Sbjct: 1 MAE--ENLELSLLCTESN--------VDDEGMIVDETPIEISIPQMGFSQ-----SESEE 45
Query: 61 IVKVMVEKEKDHLPREDYLIRLRGGDLDLSV-RREALDWIWKAHAYYGFGPLSLCLSVNY 119
I+ MVEKEK HLP +DY+ RLR GDLDL+V RR+AL+WIWKA + FGPL CL++NY
Sbjct: 46 IIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNY 105
Query: 120 LDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRM 179
LDRFLSV P G W +QLLAVAC SLAAK+EE +VP +DLQVG+P+FVF+AK++QRM
Sbjct: 106 LDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRM 165
Query: 180 ELMILSSLGWKMRALTPCSFIDYFLAKIS-CEKYPDKSLIARSVQLILNIIKGIDFLEFR 238
EL++L+ L W++RA+TPCS+I YFL K+S C++ P +LI+RS+Q+I + KGIDFLEFR
Sbjct: 166 ELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFR 225
Query: 239 SSEIAAAVAISLK-ELPTQEVDKAITD--FFIVDKERVLKCVELIRDLSLIKVGGNNFAS 295
SE AAAVA+S+ EL D + F ++ KERV K E+I G++ S
Sbjct: 226 PSEAAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIES------DGSDLCS 279
Query: 296 FVPQSPIGVLD--AGCMSFKSDE 316
Q+P GVL+ A C SFK+ +
Sbjct: 280 ---QTPNGVLEVSACCFSFKTHD 299
>gb|AAL83926.1| D-type cyclin [Zea mays]
Length = 358
Score = 276 bits (705), Expect = 8e-73
Identities = 161/359 (44%), Positives = 225/359 (61%), Gaps = 30/359 (8%)
Query: 1 MAESFDSAESNLLCSENNSTCFDDVVVDDSGISPSWDH--------------TNVNLDNV 46
M +D A S LLC+E+N+ +DD G SW T V +D +
Sbjct: 1 MVPGYDCAASVLLCAEDNAAILG---LDDDGEESSWAAAATPPRDTVAAAAATGVAVDGI 57
Query: 47 GSDSFLCFVAQSEEIVKVMVEKEKDHLPREDYLIRL--RGGDLDLS-VRREALDWIWKAH 103
++ F S++ V +VEKE +H+P E YL +L R GDLDL+ VR++A+DWIWK
Sbjct: 58 LTE----FPLLSDDCVATLVEKEVEHMPAEGYLQKLQRRHGDLDLAAVRKDAIDWIWKVI 113
Query: 104 AYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQ 163
+Y F PL+ LSVNYLDRFLS ++FP G W QLLAVAC SLA+K+EE VP +DLQ
Sbjct: 114 EHYNFAPLTAVLSVNYLDRFLSTYEFPEGRAWMTQLLAVACLSLASKIEETFVPLPLDLQ 173
Query: 164 VGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQ 223
V E KFVF+ +TI+RMEL++LS+L W+M A+T CSF++YFL K+S P +RS
Sbjct: 174 VAEAKFVFEGRTIKRMELLVLSTLKWRMHAVTACSFVEYFLHKLSDHGAPSLLARSRSSD 233
Query: 224 LILNIIKGIDFLEFRSSEIAAAVAI-SLKELPTQEVDKAITDFFIVDKERVLKCVELIRD 282
L+L+ KG +F+ FR SEIAA+VA+ ++ E + +++A + +DKERVL+C E+I++
Sbjct: 234 LVLSTAKGAEFVVFRPSEIAASVALAAIGECRSSVIERAASSCKYLDKERVLRCHEMIQE 293
Query: 283 L----SLIKVGGNNFASFVPQSPIGVLD-AGCMSFKSDELTNGSCPNSSHSSPNAKRMK 336
S++ + S VPQSPIGVLD A C+S +SD+ T GS HSS +KR +
Sbjct: 294 KITAGSIVLKSAGSSISSVPQSPIGVLDAAACLSQQSDDATVGSPAVCYHSSSTSKRRR 352
>emb|CAA58286.1| cyclin delta-2 [Arabidopsis thaliana] gi|4544444|gb|AAD22352.1|
putative cyclin D [Arabidopsis thaliana]
gi|25412110|pir||C84613 probable cyclin D [imported] -
Arabidopsis thaliana gi|15227224|ref|NP_179835.1| cyclin
delta-2 (CYCD2) [Arabidopsis thaliana]
gi|3915636|sp|P42752|CCND2_ARATH Cyclin delta-2
Length = 361
Score = 269 bits (688), Expect = 8e-71
Identities = 156/345 (45%), Positives = 216/345 (62%), Gaps = 26/345 (7%)
Query: 11 NLLCSENNSTCFDDVVVDD----SGISPSWDHTN---VNLDNVGSDSFLCFVAQS----- 58
NL C E + + D DD G + D+ + DN G + + + S
Sbjct: 4 NLACGETSESWIIDNDDDDINYGGGFTNEIDYNHQLFAKDDNFGGNGSIPMMGSSSSSLS 63
Query: 59 EEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVN 118
E+ +K M+ +E + P DY+ RL GDLDLSVR +ALDWI K A+Y FG L +CLS+N
Sbjct: 64 EDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMN 123
Query: 119 YLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQR 178
YLDRFL+ ++ P+ W QLLAV+C SLA+KMEE VP VDLQV +PKFVF+AKTI+R
Sbjct: 124 YLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKR 183
Query: 179 MELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDFLEFR 238
MEL+++++L W+++ALTP SFIDYF+ KIS + ++LI RS + ILN K I+FL+FR
Sbjct: 184 MELLVVTTLNWRLQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFR 241
Query: 239 SSEIAAAVAISLK---ELPTQEVDKAITDFFIVDKERVLKCVELIRDL---------SLI 286
SEIAAA A+S+ E + +KA++ V +ERV +C+ L+R L SL
Sbjct: 242 PSEIAAAAAVSVSISGETECIDEEKALSSLIYVKQERVKRCLNLMRSLTGEENVRGTSLS 301
Query: 287 KVGGNNFASFVPQSPIGVLDAGCMSFKSDELTNGSCPNSSHSSPN 331
+ VP SP+GVL+A C+S++S+E T SC NSS SSP+
Sbjct: 302 QEQARVAVRAVPASPVGVLEATCLSYRSEERTVESCTNSSQSSPD 346
>ref|XP_450928.1| cyclin [Oryza sativa (japonica cultivar-group)]
gi|46806319|dbj|BAD17511.1| cyclin [Oryza sativa
(japonica cultivar-group)] gi|18916916|dbj|BAB85522.1|
cyclin [Oryza sativa (japonica cultivar-group)]
Length = 356
Score = 268 bits (684), Expect = 2e-70
Identities = 157/332 (47%), Positives = 211/332 (63%), Gaps = 30/332 (9%)
Query: 4 SFDSAESNLLCSENNSTCF---------DDVVVDDSGISPSWDHTNVNLDNVGSDSFLCF 54
S++ A S LLC+E++S+ ++ VV + +D G D F
Sbjct: 6 SYEMAASILLCAEDSSSVLGFGGEEEEEEEDVVAGKRARCAGPPPPPCVDVAGVD----F 61
Query: 55 VAQSEEIVKVMVEKEKDHLPREDYLIRLRGG----DLDLSVRREALDWIWKAHAYYGFGP 110
SEE V +VE E DH+PREDY RLR G DLDL VR +A+DWIWK H+YY F P
Sbjct: 62 AVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAP 121
Query: 111 LSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFV 170
L+ CL+VNYLDRFLS++Q P G W QLLAVAC SLAAKMEE VPQS+DLQVGE ++V
Sbjct: 122 LTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYV 181
Query: 171 FQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIK 230
F+AKTIQRMEL++LS+L W+M+A+TP S++DYFL +++ P S +LIL I +
Sbjct: 182 FEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSALLSSELILCIAR 241
Query: 231 GIDFLEFRSSEIAAAVAISLKELPTQEVDKAITDFFIVDKERVLKCVELIRDLSLIKVGG 290
G + L FR SEIAAAVA ++ V + F V+KER+ C E+I+ + LI
Sbjct: 242 GTECLGFRPSEIAAAVAAAV-------VGEEHAAFSHVNKERMSHCQEVIQAMELIHPKP 294
Query: 291 NN-----FASFVPQSPIGVLD-AGCMSFKSDE 316
++ +S +P+SP GVLD AGC+S++SD+
Sbjct: 295 SSPSRVFVSSSIPRSPTGVLDAAGCLSYRSDD 326
>pir||S51651 cyclin delta-2 - Arabidopsis thaliana
Length = 383
Score = 266 bits (681), Expect = 5e-70
Identities = 144/286 (50%), Positives = 196/286 (68%), Gaps = 14/286 (4%)
Query: 58 SEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSV 117
SE+ +K M+ +E + P DY+ RL GDLDLSVR +ALDWI K A+Y FG L +CLS+
Sbjct: 63 SEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSM 122
Query: 118 NYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQ 177
NYLDRFL+ ++ P+ W QLLAV+C SLA+KMEE VP VDLQV +PKFVF+AKTI+
Sbjct: 123 NYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIK 182
Query: 178 RMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDFLEF 237
RMEL+++++L W+++ALTP SFIDYF+ KIS + ++LI RS + ILN K I+FL+F
Sbjct: 183 RMELLVVTTLNWRLQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDF 240
Query: 238 RSSEIAAAVAISLK---ELPTQEVDKAITDFFIVDKERVLKCVELIRDL---------SL 285
R SEIAAA A+S+ E + +KA++ V +ERV +C+ L+R L SL
Sbjct: 241 RPSEIAAAAAVSVSISGETECIDEEKALSSLIYVKQERVKRCLNLMRSLTGEENVRGTSL 300
Query: 286 IKVGGNNFASFVPQSPIGVLDAGCMSFKSDELTNGSCPNSSHSSPN 331
+ VP SP+GVL+A C+S++S+E T SC NSS SSP+
Sbjct: 301 SQEQARVAVRAVPASPVGVLEATCLSYRSEERTVESCTNSSQSSPD 346
>gb|AAQ08041.1| cyclin D2 [Triticum aestivum]
Length = 353
Score = 263 bits (671), Expect = 7e-69
Identities = 157/349 (44%), Positives = 213/349 (60%), Gaps = 21/349 (6%)
Query: 5 FDSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDS-------FLCFVAQ 57
+D A S LLC+E+N+ +DD SW + +D+ + Q
Sbjct: 6 YDCAASVLLCAEDNAAILG---LDDDEEDCSWAAAAATPPRIAADAAAAAEGFLVDHPVQ 62
Query: 58 SEEIVKVMVEKEKDHLPREDY--LIRLRGGDLDLS-VRREALDWIWKAHAYYGFGPLSLC 114
S+E V +VE EK+H+P + Y ++ R G LDL+ VRR+A+DWIW+ ++ F PL+
Sbjct: 63 SDECVAALVETEKEHMPADGYPQMLLRRPGALDLAAVRRDAIDWIWEVIEHFNFAPLTAV 122
Query: 115 LSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAK 174
LSVNYLDRFLSV+ P G W QLLAVAC SLA+KMEE VP VDLQV E F+ +
Sbjct: 123 LSVNYLDRFLSVYPLPEGKAWVTQLLAVACLSLASKMEETYVPLPVDLQVVEANSAFEGR 182
Query: 175 TIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDF 234
TI+RMEL++LS+L W+M+A+T CSFIDYFL K + P +RS LIL+ KG DF
Sbjct: 183 TIKRMELLVLSTLKWRMQAVTACSFIDYFLRKFNDHDAPSMLAFSRSTDLILSTAKGADF 242
Query: 235 LEFRSSEIAAAVAI-SLKELPTQEVDKAITDFFIVDKERVLKCVELIRD-----LSLIKV 288
L FR SEIAA+VA+ + E T V++A T ++KERVL+C ELI+D ++K
Sbjct: 243 LVFRPSEIAASVALAAFGERNTSVVERATTTCKFINKERVLRCYELIQDKVAMGTIVLKS 302
Query: 289 GGNNFASFVPQSPIGVLD-AGCMSFKSDELTNGSCPNSSHSSPNAKRMK 336
G++ S VPQSPIGV D A C+S +SD+ GS +S +KR +
Sbjct: 303 AGSSMFS-VPQSPIGVSDAAACLSQQSDDTAVGSPATCYQASSASKRRR 350
>ref|XP_482973.1| putative D-type cyclin [Oryza sativa (japonica cultivar-group)]
gi|42408572|dbj|BAD09749.1| putative D-type cyclin
[Oryza sativa (japonica cultivar-group)]
Length = 383
Score = 263 bits (671), Expect = 7e-69
Identities = 140/281 (49%), Positives = 189/281 (66%), Gaps = 18/281 (6%)
Query: 54 FVAQSEEIVKVMVEKEKDHLPREDYLIRLRGG--DLDLSVRREALDWIWKAHAYYGFGPL 111
F QSEE V +VE+E+ H+PR DY RLRGG D+DL VR EA+ WIW+ + YY F +
Sbjct: 70 FPRQSEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSV 129
Query: 112 SLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVF 171
+ L+VNYLDRFLS ++ P G W QLL+VAC S+AAKMEE VPQ +DLQ+GEP+F+F
Sbjct: 130 TAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLF 189
Query: 172 QAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKG 231
+ +TI RMEL++L++L W+M+A+TP S+IDYFL K++ +S + RS +LIL I G
Sbjct: 190 EVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELILRIAAG 249
Query: 232 IDFLEFRSSEIAAAVAISLKELPTQEVDKAITDFFI-VDKERVLKCVELIRD-------- 282
FLEFR SEIAAAVA ++ T V++ I + F VDK RVL+C E I+D
Sbjct: 250 TGFLEFRPSEIAAAVAATVAGEATGVVEEDIAEAFTHVDKGRVLQCQEAIQDHHYSMATI 309
Query: 283 -------LSLIKVGGNNFASFVPQSPIGVLDAGCMSFKSDE 316
S + + +S VP+SP+ VLDAGC+S+KSD+
Sbjct: 310 NTVQPKPASTRRGSASASSSSVPESPVAVLDAGCLSYKSDD 350
>ref|NP_196606.3| cyclin family protein [Arabidopsis thaliana]
gi|48958515|gb|AAT47810.1| At5g10440 [Arabidopsis
thaliana] gi|46931234|gb|AAT06421.1| At5g10440
[Arabidopsis thaliana]
Length = 298
Score = 253 bits (646), Expect = 6e-66
Identities = 131/230 (56%), Positives = 171/230 (73%), Gaps = 6/230 (2%)
Query: 54 FVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSL 113
F +SEEIV+ M+EKE+ H PR+DYL RLR GDLD +VR +AL WIWKA FGPL +
Sbjct: 31 FPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCI 90
Query: 114 CLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQA 173
CL++NYLDRFLSV P G WTVQLLAVAC SLAAK+EE VP+ + LQVG P FVF+A
Sbjct: 91 CLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEA 150
Query: 174 KTIQRMELMILSSLGWKMRALTPCSFIDYFLAKIS-CEKYPDKSLIARSVQLILNIIKGI 232
K++QRMEL++L+ L W++RA+TPCS++ YFL+KI+ ++ P L+ RS+Q+I + KGI
Sbjct: 151 KSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGI 210
Query: 233 DFLEFRSSEIAAAVAISLKELPTQEVDK--AITDFFIVDKERVLKCVELI 280
DFLEFR+SEIAAAVA+S+ + DK + F ++KERV K E+I
Sbjct: 211 DFLEFRASEIAAAVALSVS---GEHFDKFSFSSSFSSLEKERVKKIGEMI 257
>gb|AAL83928.1| D-type cyclin [Zea mays]
Length = 390
Score = 244 bits (624), Expect = 2e-63
Identities = 154/362 (42%), Positives = 214/362 (58%), Gaps = 33/362 (9%)
Query: 5 FDSAESNLLCSENNSTC--FDDVVVDDSGISPSWDHTNVNLDNVGSDSFLCFVAQSEEIV 62
+D+A S LLC+E +S+ +D+ + + + D+ G+D F QSEE V
Sbjct: 6 YDAAASMLLCAEEHSSILWYDEEEEELEAVGRRRGRSPGYGDDFGAD---LFPPQSEECV 62
Query: 63 KVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDR 122
+VE+E+DH+P Y RLRGG L VRREA+DWIWKA+ ++ F PL+ L+VNYLDR
Sbjct: 63 AGLVERERDHMPGPCYGDRLRGGGGCLCVRREAVDWIWKAYTHHRFRPLTAYLAVNYLDR 122
Query: 123 FLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELM 182
FLS+ + P G W QLLAVAC SLAAKMEE VPQ +DLQVG+ ++VF+AKT+QRMEL+
Sbjct: 123 FLSLSEVPDGKDWMTQLLAVACVSLAAKMEETAVPQCLDLQVGDARYVFEAKTVQRMELL 182
Query: 183 ILSSLGWKMRALTPCSFIDYFLAKIS--CEKYPDKSLIARSVQLILNIIKGIDFLEFRSS 240
+L++L W+M A+TP S++DYFL K+S P + +S +LIL +G + FR S
Sbjct: 183 VLTTLNWRMHAVTPFSYVDYFLNKLSNGGSTAPRSCWLLQSAELILRAARGTGCVGFRPS 242
Query: 241 EIAAAVAISLKELPTQEVDKA----ITDFFIVDKERVLKCVELIRDL-SLIKVGGNNFAS 295
EIAAAVA ++ +VD A VDKERVL+C E I + S + G+
Sbjct: 243 EIAAAVAAAV----AGDVDDADGVENACCAHVDKERVLRCQEAIGSMASSAAIDGDATVP 298
Query: 296 ---------------FVPQSPIGVLD-AGCMSFKSDELTNGSCPN-SSHSSPNAKRMKFD 338
VPQSP+GVLD A C+S++S+E + + +SH P +
Sbjct: 299 PKSARRRSSPVPVPVPVPQSPVGVLDAAACLSYRSEEAATATATSAASHGPPGSSSSSST 358
Query: 339 GP 340
P
Sbjct: 359 SP 360
>ref|NP_914752.1| putative D-type cyclin [Oryza sativa (japonica cultivar-group)]
gi|22296414|dbj|BAC10182.1| putative D-type cyclin
[Oryza sativa (japonica cultivar-group)]
Length = 356
Score = 243 bits (621), Expect = 5e-63
Identities = 148/350 (42%), Positives = 209/350 (59%), Gaps = 24/350 (6%)
Query: 8 AESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDSF--------LCFVAQSE 59
A + LLC+E++S+ V+ G L G F F S+
Sbjct: 8 ASNILLCAEDSSS-----VLGLGGFGGGGGEVAAELGCGGGGGFDFFGFGGGAVFPIDSD 62
Query: 60 EIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNY 119
E V ++VEKE DH P+ YL +L G L+ S R++A+DWI K H+YY FGPLSL L+VNY
Sbjct: 63 EFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYLAVNY 122
Query: 120 LDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRM 179
LDRFLS F P +W QLL+V+C SLA KMEE VP +DLQV + ++VF+A+ I+RM
Sbjct: 123 LDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKRM 182
Query: 180 ELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDFLEFRS 239
EL+++ +L W+++A+TP SFI YFL K + K P +L + L + +K FL FR
Sbjct: 183 ELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGKPPSYTLASWCSDLTVGTLKDSRFLSFRP 242
Query: 240 SEIAAAVAIS-LKELPTQEVDKAITDFFI-VDKERVLKCVELIRDLSLI-KVGGNNFASF 296
SEIAAAV ++ L E + A+ + I V+KE V++C EL+ + +L+ K+ +N +S
Sbjct: 243 SEIAAAVVLAVLAENQFLVFNSALGESEIPVNKEMVMRCYELMVEKALVKKIRNSNASSS 302
Query: 297 VPQSPIGVLDAGCMSFKSDELTNGSCP--------NSSHSSPNAKRMKFD 338
VP SPI VLDA C SF+SD+ T GS NS S+P +KR + +
Sbjct: 303 VPHSPITVLDAACFSFRSDDTTLGSSQSNSNNKDYNSQDSAPASKRRRLN 352
>emb|CAB89399.1| cyclin protein-like [Arabidopsis thaliana] gi|11357238|pir||T49995
cyclin protein-like - Arabidopsis thaliana
Length = 317
Score = 242 bits (617), Expect = 1e-62
Identities = 131/249 (52%), Positives = 172/249 (68%), Gaps = 25/249 (10%)
Query: 54 FVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSL 113
F +SEEIV+ M+EKE+ H PR+DYL RLR GDLD +VR +AL WIWKA FGPL +
Sbjct: 31 FPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCI 90
Query: 114 CLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQA 173
CL++NYLDRFLSV P G WTVQLLAVAC SLAAK+EE VP+ + LQVG P FVF+A
Sbjct: 91 CLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEA 150
Query: 174 KTIQRMELMILSSLGWKMRALTPCSFIDYFLAKIS-CEKYPDKSLIARSVQ--------- 223
K++QRMEL++L+ L W++RA+TPCS++ YFL+KI+ ++ P L+ RS+Q
Sbjct: 151 KSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGD 210
Query: 224 ----------LILNIIKGIDFLEFRSSEIAAAVAISLKELPTQEVDK--AITDFFIVDKE 271
LI+++ GIDFLEFR+SEIAAAVA+S+ + DK + F ++KE
Sbjct: 211 RLGLFFFKGVLIVDVWAGIDFLEFRASEIAAAVALSVS---GEHFDKFSFSSSFSSLEKE 267
Query: 272 RVLKCVELI 280
RV K E+I
Sbjct: 268 RVKKIGEMI 276
>gb|AAV28533.1| D-type cyclin [Saccharum officinarum]
Length = 254
Score = 224 bits (570), Expect = 4e-57
Identities = 120/248 (48%), Positives = 166/248 (66%), Gaps = 6/248 (2%)
Query: 95 ALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEV 154
A+DWIWK +Y F PL+ LSVNYLDRFLS ++FP W QLLAVAC SLA+KMEE
Sbjct: 1 AIDWIWKVIEHYNFAPLTAVLSVNYLDRFLSTYEFPEDRAWMTQLLAVACLSLASKMEET 60
Query: 155 KVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPD 214
VP +DLQV E KFVF+ +TI+RMEL +L++L W+M A+T CS++ YFL K+S P
Sbjct: 61 FVPLPLDLQVAETKFVFEGRTIRRMELHVLNTLKWRMHAVTACSYVKYFLHKLSDHGAPS 120
Query: 215 KSLIARSVQLILNIIKGIDFLEFRSSEIAAAVAI-SLKELPTQEVDKAITDFFIVDKERV 273
+RS L+L+ KG +F+ FR SEIAA+VA+ ++ E + +++A + ++KERV
Sbjct: 121 LLARSRSSDLVLSTAKGAEFVVFRPSEIAASVALAAMGECRSSVIERAASSCKYLNKERV 180
Query: 274 LKCVELIRDL----SLIKVGGNNFASFVPQSPIGVLD-AGCMSFKSDELTNGSCPNSSHS 328
L+C E+I++ S++ + S VPQSPIGVLD A C+S +SD+ T GS HS
Sbjct: 181 LRCHEMIQEKITMGSIVLKSAGSSISSVPQSPIGVLDAAACLSQQSDDATGGSPAVCYHS 240
Query: 329 SPNAKRMK 336
S +KR +
Sbjct: 241 SSTSKRRR 248
>ref|XP_470819.1| putative cyclin [Oryza sativa (japonica cultivar-group)]
gi|40539012|gb|AAR87269.1| putative cyclin [Oryza sativa
(japonica cultivar-group)]
Length = 358
Score = 206 bits (524), Expect = 8e-52
Identities = 136/359 (37%), Positives = 199/359 (54%), Gaps = 41/359 (11%)
Query: 2 AESFDSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDSFLCFVAQ---- 57
AESF +LLC E++ + F DD G+ + T +G L F A
Sbjct: 14 AESF-----SLLCEEDSESVFGS---DDDGV----EETATMAPELGKMMSLGFSASHHLG 61
Query: 58 -----SEEIVKVMVEKEKDHL---PREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFG 109
EE+V +EKE + + R +YL +L G ++LS R A+DWI K AYY FG
Sbjct: 62 DGGGGGEELVGSFMEKEVEQMVETARGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFG 121
Query: 110 PLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKF 169
PL L+VNYLDRFLS +F + W QLL VAC SLAAKMEE P ++DLQV P++
Sbjct: 122 PLCAYLAVNYLDRFLSSVEFSNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEY 181
Query: 170 VFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNII 229
VF A+TI RME+++L++L W+M+A+TP ++I +FL KI+ LI+R ++IL+ +
Sbjct: 182 VFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTM 241
Query: 230 KGIDFLEFRSSEIAAAVAISLKELPTQEVD---KAITDFFIVDKERVLKCVELIRDLSLI 286
K FL FR SEIA AVA+S+ + +D + VDK+ V +C + +++++L+
Sbjct: 242 KATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQEMALV 301
Query: 287 KVGGNNFASFVPQSPIGVLDAGCMSFKSDE--LTNGSCP-----NSSHSSPNAKRMKFD 338
SP GVLD C + KSD+ G+ P N+ +P +KR + +
Sbjct: 302 MQNST-------ASPSGVLDTSCFTSKSDDDYSIPGTSPQVDNNNNQACTPASKRARVE 353
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 570,900,311
Number of Sequences: 2540612
Number of extensions: 23156566
Number of successful extensions: 51949
Number of sequences better than 10.0: 808
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 577
Number of HSP's that attempted gapping in prelim test: 51110
Number of HSP's gapped (non-prelim): 834
length of query: 346
length of database: 863,360,394
effective HSP length: 129
effective length of query: 217
effective length of database: 535,621,446
effective search space: 116229853782
effective search space used: 116229853782
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)
Medicago: description of AC135848.10