BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135798.2 + phase: 0
(261 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 507 e-142
sp|P33444|RS3A_CATRO 40S ribosomal protein S3a (CYC07 protein) 472 e-132
dbj|BAA89498.1| cyc07 [Daucus carota] 469 e-131
gb|AAA80978.1| ribosomal protein S3a gi|1350984|sp|P49198|RS3A_H... 456 e-127
gb|AAM63004.1| putative 40S ribosomal protein S3A (S phase speci... 456 e-127
emb|CAB80184.1| Putative S-phase-specific ribosomal protein [Ara... 455 e-127
pir||JQ0939 ribosomal protein S3a - Madagascar periwinkle gi|217... 447 e-124
dbj|BAA05057.1| This gene is specifically expressed at the S pha... 447 e-124
dbj|BAA05059.1| cyc07 [Oryza sativa] gi|7441115|pir||S42540 ribo... 445 e-124
ref|XP_464995.1| putative ribosomal protein S3a, cytosolic [Oryz... 441 e-122
emb|CAA81030.1| unnamed protein product [Brassica rapa] gi|48028... 436 e-121
gb|AAC98779.1| S-phase-specific ribosomal protein [Oryza sativa]... 426 e-118
gb|AAX55706.1| cyc07 [Vitis vinifera] 414 e-114
gb|AAP80855.1| cyc07 [Triticum aestivum] 387 e-106
dbj|BAD11816.1| putative S-phase specific ribosomal protein cyc0... 365 e-100
gb|AAD23952.1| ribosomal protein S3 [Tortula ruralis] gi|1736986... 353 2e-96
emb|CAD70957.1| probable ribosomal protein 10, cytosolic [Neuros... 347 1e-94
gb|EAL92047.1| ribosomal protein S0.e.B, cytosolic [Aspergillus ... 345 7e-94
ref|XP_039702.1| PREDICTED: similar to ribosomal protein S3a; 40... 345 9e-94
gb|AAW82136.1| ribosomal protein S3a [Bos taurus] gi|12804577|gb... 343 3e-93
>emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum]
Length = 261
Score = 507 bits (1305), Expect = e-142
Identities = 252/261 (96%), Positives = 260/261 (99%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKAADPF+KKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFE+SLADLQGDEDNAFRKIRLRAEDVQGKN+LTNF+GMDFTTDKLRSLVRKWQTL
Sbjct: 61 LKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIM+NQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
LK+LVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVG 240
Query: 241 TKVERPADETMVEGTPEIVGA 261
TKVE PADET+VEGTPEIVGA
Sbjct: 241 TKVESPADETVVEGTPEIVGA 261
>sp|P33444|RS3A_CATRO 40S ribosomal protein S3a (CYC07 protein)
Length = 260
Score = 472 bits (1214), Expect = e-132
Identities = 230/261 (88%), Positives = 253/261 (96%), Gaps = 1/261 (0%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
L+HRVFE+SLADLQGDED++FRKIRLRAED+QGKN+LTNFWGMDFTTDKLRSLVRKWQ+L
Sbjct: 61 LEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTD+YTLRMFCIGFTK+R+NQ KRTCYAQSSQIRQIRRKMREIM+NQA SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
LKDLV+KFIPE IG+EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+ED+G
Sbjct: 181 LKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDIG 240
Query: 241 TKVERPADETMVEGTPEIVGA 261
TK++RPA+E + E T E++GA
Sbjct: 241 TKLDRPAEEAVAEPT-EVIGA 260
>dbj|BAA89498.1| cyc07 [Daucus carota]
Length = 261
Score = 469 bits (1206), Expect = e-131
Identities = 233/261 (89%), Positives = 248/261 (94%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAP+VFQ KNVGKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPNVFQNKNVGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEV LADLQGDED A+RKIRLRAEDVQGKN+LTNF+GMDFTTDKLRSLVRKWQTL
Sbjct: 61 LKHRVFEVCLADLQGDEDQAYRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTD+YTLRMFCIGFTK+R+NQ KRTCYAQSSQIRQIRRKM EIM NQA+SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
LK+LV KFIPE IG+EIEKATSSI+PLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240
Query: 241 TKVERPADETMVEGTPEIVGA 261
K+ERP +ETMVEG E+VGA
Sbjct: 241 VKLERPIEETMVEGETEVVGA 261
>gb|AAA80978.1| ribosomal protein S3a gi|1350984|sp|P49198|RS3A_HELAN 40S ribosomal
protein S3a gi|7441118|pir||T09301 ribosomal protein S3a
- common sunflower
Length = 260
Score = 456 bits (1174), Expect = e-127
Identities = 223/261 (85%), Positives = 248/261 (94%), Gaps = 1/261 (0%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKAADPF+KKDWYDIKAPS+F +NVGKTLV+RTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEVSLADLQ DED+++RKIRLRAEDVQGKN+LTNFWGMD TTDKLRSLV+KWQ+L
Sbjct: 61 LKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTDN+TLRMFCIGFTK+R+NQVKRTCYAQSSQI+QIRRKMREIM+ QA +CD
Sbjct: 121 IEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
LK+LV+KFIPE IG+EIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240
Query: 241 TKVERPADETMVEGTPEIVGA 261
K++RPA+E E T E++GA
Sbjct: 241 VKLDRPAEEAAPEAT-EVIGA 260
>gb|AAM63004.1| putative 40S ribosomal protein S3A (S phase specific) [Arabidopsis
thaliana] gi|20148513|gb|AAM10147.1| putative 40S
ribosomal protein S3A (S phase specific) [Arabidopsis
thaliana] gi|17065440|gb|AAL32874.1| putative 40S
ribosomal protein S3A (S phase specific) [Arabidopsis
thaliana] gi|12322852|gb|AAG51414.1| putative 40S
ribosomal protein S3A (S phase specific); 75194-73527
[Arabidopsis thaliana] gi|15229364|ref|NP_187135.1| 40S
ribosomal protein S3A (RPS3aA) [Arabidopsis thaliana]
Length = 262
Score = 456 bits (1172), Expect = e-127
Identities = 224/262 (85%), Positives = 244/262 (92%), Gaps = 1/262 (0%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAPS+F +NVGKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEVSLADLQGDEDNA+RKIRLRAEDVQG+N+L FWGMDFTTDKLRSLV+KWQTL
Sbjct: 61 LKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTD+YTLR+FCI FTKRR+NQVKRTCYAQSSQIRQIRRKMR+IM+ +A+SCD
Sbjct: 121 IEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDV 239
LKDLV KFIPE IG+EIEKAT IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDV
Sbjct: 181 LKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDV 240
Query: 240 GTKVERPADETMVEGTPEIVGA 261
G KV+RPADE VE EI+GA
Sbjct: 241 GVKVDRPADEMAVEEPTEIIGA 262
>emb|CAB80184.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana]
gi|3096936|emb|CAA18846.1| Putative S-phase-specific
ribosomal protein [Arabidopsis thaliana]
gi|2661422|emb|CAA04689.1| Putative S-phase-specific
ribosomal protein [Arabidopsis thaliana]
gi|17064848|gb|AAL32578.1| Putative S-phase-specific
ribosomal protein [Arabidopsis thaliana]
gi|15236171|ref|NP_195193.1| 40S ribosomal protein S3A
(RPS3aB) [Arabidopsis thaliana]
gi|19884297|sp|Q42262|RS3A_ARATH 40S ribosomal protein
S3a
Length = 262
Score = 455 bits (1170), Expect = e-127
Identities = 225/262 (85%), Positives = 242/262 (91%), Gaps = 1/262 (0%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAP F +NVGKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEVSLADLQ DEDNA+RKIRLRAEDVQG+N+LT FWGMDFTTDKLRSLV+KWQTL
Sbjct: 61 LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTD YTLRMFCI FTKRR+NQVKRTCYAQSSQIRQIRRKM EIM+ +A+SCD
Sbjct: 121 IEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDV 239
LK+LV KFIPE IG+EIEKAT IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDV
Sbjct: 181 LKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 240
Query: 240 GTKVERPADETMVEGTPEIVGA 261
G KV+RPADETMVE EI+GA
Sbjct: 241 GVKVDRPADETMVEEPTEIIGA 262
>pir||JQ0939 ribosomal protein S3a - Madagascar periwinkle
gi|217903|dbj|BAA00860.1| ORF [Catharanthus roseus]
Length = 245
Score = 447 bits (1151), Expect = e-124
Identities = 218/238 (91%), Positives = 234/238 (97%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
L+HRVFE+SLADLQGDED++FRKIRLRAED+QGKN+LTNFWGMDFTTDKLRSLVRKWQ+L
Sbjct: 61 LEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTD+YTLRMFCIGFTK+R+NQ KRTCYAQSSQIRQIRRKMREIM+NQA SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 238
LKDLV+KFIPE IG+EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+ED
Sbjct: 181 LKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNED 238
>dbj|BAA05057.1| This gene is specifically expressed at the S phase during the cell
cycle in the synchronous culture of periwinkle cells.
[Catharanthus roseus]
Length = 245
Score = 447 bits (1150), Expect = e-124
Identities = 218/238 (91%), Positives = 233/238 (97%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFE+SLADLQGDED++FRKIRLRAED+QGKN+LTNFWGMDFTTDKLRSLVRKWQ+L
Sbjct: 61 LKHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTD+YTLRMFCIGFTK+R+NQ KRTCYAQSSQIRQIRRKMREIM+NQA SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAPSCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED 238
LKDLV+KFIPE IG+EIEKAT SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+ED
Sbjct: 181 LKDLVQKFIPESIGREIEKATPSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNED 238
>dbj|BAA05059.1| cyc07 [Oryza sativa] gi|7441115|pir||S42540 ribosomal protein S3a -
rice gi|1350986|sp|P49397|RS3A_ORYSA 40S ribosomal
protein S3a (CYC07 protein)
Length = 262
Score = 445 bits (1145), Expect = e-124
Identities = 219/255 (85%), Positives = 238/255 (92%), Gaps = 1/255 (0%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKGKKG KKK DPFAKKDWYDIKAPSVF V+N+GKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGKKGSKKKTVDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEVSLADLQ DED A+RKIRLRAEDVQGKN+LTNFWGM FTTDKLRSLV+KWQTL
Sbjct: 61 LKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTD Y LR+FCIGFTKRR NQVKRTCYAQ+SQIRQIRRKM EIM NQA+SCD
Sbjct: 121 IEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDV 239
LK+LV KFIPE+IGKEIEKATSSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY+ ED+
Sbjct: 181 LKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDI 240
Query: 240 GTKVERPADETMVEG 254
GTK++RPA++ + G
Sbjct: 241 GTKLDRPAEDEAMAG 255
>ref|XP_464995.1| putative ribosomal protein S3a, cytosolic [Oryza sativa (japonica
cultivar-group)] gi|51963984|ref|XP_506775.1| PREDICTED
OJ1115_D03.49 gene product [Oryza sativa (japonica
cultivar-group)] gi|47847921|dbj|BAD21711.1| putative
ribosomal protein S3a, cytosolic [Oryza sativa (japonica
cultivar-group)] gi|47847734|dbj|BAD21513.1| putative
ribosomal protein S3a, cytosolic [Oryza sativa (japonica
cultivar-group)]
Length = 261
Score = 441 bits (1133), Expect = e-122
Identities = 213/248 (85%), Positives = 234/248 (93%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKG+KG KKK DPF+KKDWYDIKAP+VF V+N+GKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGRKGSKKKTVDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEVSLADLQ DED A+RK+RLRAEDVQG+N+LTNFWGM FTTDKLRSLV+KWQTL
Sbjct: 61 LKHRVFEVSLADLQNDEDQAYRKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTDNY LR+FCIGFTKRR NQVKRTCYAQ+SQIRQIRRKM EIM NQA++CD
Sbjct: 121 IEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASTCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
LK+LV KFIPE+IGKEIEK+TSSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVG
Sbjct: 181 LKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVG 240
Query: 241 TKVERPAD 248
K++RPA+
Sbjct: 241 MKLDRPAE 248
>emb|CAA81030.1| unnamed protein product [Brassica rapa] gi|480282|pir||S36622
ribosomal protein S3a - turnip
gi|1350981|sp|P49396|RS3A_BRARA 40S ribosomal protein
S3a (S phase specific protein BIS289)
gi|387909|gb|AAA33013.1| S-phase-specific protein
Length = 262
Score = 436 bits (1121), Expect = e-121
Identities = 222/263 (84%), Positives = 239/263 (90%), Gaps = 3/263 (1%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKG+KGGKKK DPFAKKDWYDIKAPS F +NVGKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGRKGGKKKIVDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEVSLADL DED A+RKIRLRAEDVQG+N+LT FWGMDFTTDKLRSLV+KWQTL
Sbjct: 61 LKHRVFEVSLADLNKDEDQAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMI-NQATSC 179
IE+HVDVKTTDNYTLR+FCI FTKRR+NQVKRTCYAQSSQIRQIR KMREIMI +A+SC
Sbjct: 121 IESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSC 180
Query: 180 DLKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SED 238
DLK+LV KFIPE IGK+IEKAT IYPLQNVFIRKVKILKAPKFDL KLMEVHGDY +ED
Sbjct: 181 DLKELVAKFIPESIGKDIEKATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAED 240
Query: 239 VGTKVERPADETMVEGTPEIVGA 261
VG KV+RPADE + E T EI+GA
Sbjct: 241 VGVKVDRPADEVVEEPT-EIIGA 262
>gb|AAC98779.1| S-phase-specific ribosomal protein [Oryza sativa]
gi|7441116|pir||T02874 ribosomal protein S3a, cytosolic
- rice
Length = 261
Score = 426 bits (1096), Expect = e-118
Identities = 206/248 (83%), Positives = 230/248 (92%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKG+KG KKK DPF+KKDWYDIKAP+VF V+N+GKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGRKGSKKKTVDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEVSLADL+ DED A+RK+RLRAEDVQG+N+LTNFWGM FTTDKLRSLV+KWQTL
Sbjct: 61 LKHRVFEVSLADLRNDEDQAYRKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTDNY LR+FCIGFTKRR NQVKRTCYAQ ++ + RRKM EIM NQA++CD
Sbjct: 121 IEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQVARSGRSRRKMVEIMANQASTCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
LK+LV KFIPE+IGKEIEK+TSSI+PLQNVFIRKVKILKAPKFDLGKLMEVHGDY EDVG
Sbjct: 181 LKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDVG 240
Query: 241 TKVERPAD 248
K++RPA+
Sbjct: 241 MKLDRPAE 248
>gb|AAX55706.1| cyc07 [Vitis vinifera]
Length = 237
Score = 414 bits (1063), Expect = e-114
Identities = 207/239 (86%), Positives = 220/239 (91%), Gaps = 2/239 (0%)
Query: 23 PFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDNAFR 82
PFAKKDWYDIKAPS+F V+NVGKTLVSRTQGTKIASEGLKHRV +SLADLQ DED A+R
Sbjct: 1 PFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVSGISLADLQNDEDRAYR 60
Query: 83 KIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGF 142
KIRLRAEDVQGKN+LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI F
Sbjct: 61 KIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAF 120
Query: 143 TKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCDLKDLVRKFIPEMIGKEIEKATS 202
TKR + Q +T YAQSSQIRQIRRKMREIM QA SCDLK+LVRKFIPEMIG+EIEKATS
Sbjct: 121 TKRSTRQ--KTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATS 178
Query: 203 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKVERPADETMVEGTPEIVGA 261
SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG K+ERPA+ET+ E E+VGA
Sbjct: 179 SIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPAEETVAEVETEVVGA 237
>gb|AAP80855.1| cyc07 [Triticum aestivum]
Length = 242
Score = 387 bits (995), Expect = e-106
Identities = 194/236 (82%), Positives = 207/236 (87%), Gaps = 1/236 (0%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKRISKG+KG KKKA DPF KK WYDIKAP +F +NVGKTLVSRTQGTKIASEG
Sbjct: 1 MAVGKNKRISKGRKGSKKKAVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEG 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LKHRVFEVSLADLQ DED A+RKIRLRAEDVQG N+LTNFWGMDFTTDKLRSLVRKWQTL
Sbjct: 61 LKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTDNY LRMF IGFTKRR NQVKRTCYAQ+SQIRQIRRKM EIM+NQA SCD
Sbjct: 121 IEAHVDVKTTDNYMLRMFAIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDL-GKLMEVHGDY 235
L +LV KFIPE+IGKEIE ATS I PLQNV++RKVKI + P+ G EVHGDY
Sbjct: 181 LXELVNKFIPEVIGKEIEXATSGIXPLQNVYVRKVKIPEGPQVSTWGSFXEVHGDY 236
>dbj|BAD11816.1| putative S-phase specific ribosomal protein cyc07 [Lentinula
edodes]
Length = 256
Score = 365 bits (938), Expect = e-100
Identities = 175/252 (69%), Positives = 215/252 (84%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKR+SKGKKG KKK DPF++KDWYDIKAPS+F V+NVGKTLV+R+QG K A++
Sbjct: 1 MAVGKNKRLSKGKKGIKKKVVDPFSRKDWYDIKAPSIFDVRNVGKTLVNRSQGLKNANDS 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LK R+ EVSL DL +E+ +FRKI+LR ++VQGKN LTNF GMDFT+DKLRSLVRKWQTL
Sbjct: 61 LKGRIIEVSLGDLNKEEEQSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEAHVDVKTTD Y LR+F IGFTKRR QV++T YAQSSQ+R+IR+KM EIM +AT+CD
Sbjct: 121 IEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQVREIRKKMFEIMTREATNCD 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
LK+LV+KF+PE IG+EIEKA+ SIYPLQNV++RK KILKAPKFD+ KLME+HG+ +++ G
Sbjct: 181 LKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETG 240
Query: 241 TKVERPADETMV 252
TK+ + E V
Sbjct: 241 TKIAKDFKEPEV 252
>gb|AAD23952.1| ribosomal protein S3 [Tortula ruralis]
gi|17369860|sp|Q9XEG7|RS3A_TORRU 40S ribosomal protein
S3a
Length = 248
Score = 353 bits (907), Expect = 2e-96
Identities = 182/244 (74%), Positives = 206/244 (83%), Gaps = 4/244 (1%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGK+KRISKGKKGGKKK DPF+KKDWYDIKAP + G+ RT GTKIAS+G
Sbjct: 1 MAVGKDKRISKGKKGGKKKIVDPFSKKDWYDIKAPPRSRRARSGRRC-HRTAGTKIASDG 59
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
L RVFEVSLADLQ DED AFRKI+LRAEDVQGKN+LTNFWGMDFTTDKLRSLVRKWQ+L
Sbjct: 60 LNFRVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 119
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
I+AHVDVKTTDNY +R+FCI FTK+R N R YAQSSQI IRRKMREIM+ +A +CD
Sbjct: 120 IQAHVDVKTTDNYQIRIFCIAFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCD 177
Query: 181 LKDLVRKFIPEMIGKEIEK-ATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDV 239
LK+LV KFIPE+IGKEI++ + IYPLQ+ FIRKVKILKAPKFDL KLMEVHGDY+E+V
Sbjct: 178 LKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEV 237
Query: 240 GTKV 243
G K+
Sbjct: 238 GAKI 241
>emb|CAD70957.1| probable ribosomal protein 10, cytosolic [Neurospora crassa]
Length = 256
Score = 347 bits (891), Expect = 1e-94
Identities = 174/254 (68%), Positives = 209/254 (81%), Gaps = 1/254 (0%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKR+SKGKKG KKK DPFA+KDWY IKAP+ F V++VGKTLV+RT G K A++
Sbjct: 1 MAVGKNKRLSKGKKGLKKKTQDPFARKDWYGIKAPAPFNVRDVGKTLVNRTTGLKNANDA 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LK R+FEVSLADLQ DED++FRK++LR +++QGKN LTNF G+DFT+DKLRSLVRKWQTL
Sbjct: 61 LKGRIFEVSLADLQKDEDHSFRKVKLRVDEIQGKNCLTNFHGLDFTSDKLRSLVRKWQTL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEA++ VKTTD+Y LR+F I FTKRR NQVK+T YA SSQIR IRRKM EI+ +A+SC
Sbjct: 121 IEANITVKTTDDYLLRLFAIAFTKRRPNQVKKTTYAASSQIRAIRRKMTEIIQREASSCT 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDV 239
L L K IPE+IG+EIEKAT IYPLQNV IRKVK+LK PKFDLG LM +HG+ S++
Sbjct: 181 LTQLTSKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGALMSLHGESGSDEA 240
Query: 240 GTKVERPADETMVE 253
G KVER ET++E
Sbjct: 241 GQKVEREFKETVLE 254
>gb|EAL92047.1| ribosomal protein S0.e.B, cytosolic [Aspergillus fumigatus Af293]
Length = 256
Score = 345 bits (885), Expect = 7e-94
Identities = 172/254 (67%), Positives = 209/254 (81%), Gaps = 1/254 (0%)
Query: 1 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60
MAVGKNKR+SKGKKG KK+ DPF++KD Y +KAPS FQ+++VGKTLV+RT G K A++
Sbjct: 1 MAVGKNKRLSKGKKGVKKRTVDPFSRKDEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDS 60
Query: 61 LKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQTL 120
LK R+FEVSLADLQ DED+AFRK++LR ++VQGKN LTNF G+DFTTDKLRSLVRKWQ+L
Sbjct: 61 LKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTTDKLRSLVRKWQSL 120
Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSCD 180
IEA+V VKTTD+Y LR+F I FTKRR NQ+K+T YA+SSQIR IR+KM EIM +A SC
Sbjct: 121 IEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMIEIMQREAASCS 180
Query: 181 LKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDV 239
L L K IPE+IG+EIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D
Sbjct: 181 LAQLTHKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDK 240
Query: 240 GTKVERPADETMVE 253
G KVER E ++E
Sbjct: 241 GHKVEREFKEQVLE 254
>ref|XP_039702.1| PREDICTED: similar to ribosomal protein S3a; 40S ribosomal protein
S3a; v-fos transformation effector protein 1 [Homo
sapiens]
Length = 264
Score = 345 bits (884), Expect = 9e-94
Identities = 170/253 (67%), Positives = 208/253 (82%), Gaps = 9/253 (3%)
Query: 1 MAVGKNKRISKG-KKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASE 59
MAVGKNKR++KG KKG KKK DPF+KKDWYD+KAP++F ++N+GKTLV+RTQGTKIAS+
Sbjct: 1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASD 60
Query: 60 GLKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQT 119
GLK RVFEVSLADLQ DE AFRK +L EDVQGKN LTNF GMD T DK+ S+V+KWQT
Sbjct: 61 GLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 120 LIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSC 179
+IEAHVDVKTTD Y LR+FC+GFTK+R NQ+++T YAQ Q+RQIR+KM EIMI + +
Sbjct: 120 MIEAHVDVKTTDGYLLRLFCVGFTKKRKNQIRKTSYAQHQQVRQIRKKMMEIMIREVQTN 179
Query: 180 DLKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--- 236
DLK++V K IP+ IGK+IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S
Sbjct: 180 DLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSG 239
Query: 237 ----EDVGTKVER 245
++ G KVER
Sbjct: 240 KATGDETGAKVER 252
>gb|AAW82136.1| ribosomal protein S3a [Bos taurus] gi|12804577|gb|AAH01708.1|
Ribosomal protein S3a [Homo sapiens]
gi|48735352|gb|AAH71916.1| Ribosomal protein S3a [Homo
sapiens] gi|47682375|gb|AAH70211.1| Ribosomal protein
S3a [Homo sapiens] gi|16877771|gb|AAH17123.1| Ribosomal
protein S3a [Homo sapiens] gi|20988813|gb|AAH30161.1|
Ribosomal protein S3a [Homo sapiens]
gi|17512179|gb|AAH19072.1| Ribosomal protein S3a [Homo
sapiens] gi|12652897|gb|AAH00204.1| Ribosomal protein
S3a [Homo sapiens] gi|13623405|gb|AAH06298.1| Ribosomal
protein S3a [Homo sapiens] gi|14327994|gb|AAH09219.1|
Ribosomal protein S3a [Homo sapiens]
gi|14424796|gb|AAH09404.1| Ribosomal protein S3a [Homo
sapiens] gi|13436410|gb|AAH04981.1| Ribosomal protein
S3a [Homo sapiens] gi|47117764|sp|P61247|RS3A_HUMAN 40S
ribosomal protein S3a gi|854179|emb|CAA60827.1|
ribosomal protein S3a [Homo sapiens]
gi|292447|gb|AAA60290.1| ribosomal protein S3a
gi|182775|gb|AAA58487.1| v-fos transformation effector
protein gi|4506723|ref|NP_000997.1| ribosomal protein
S3a [Homo sapiens]
Length = 264
Score = 343 bits (880), Expect = 3e-93
Identities = 169/253 (66%), Positives = 208/253 (81%), Gaps = 9/253 (3%)
Query: 1 MAVGKNKRISKG-KKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASE 59
MAVGKNKR++KG KKG KKK DPF+KKDWYD+KAP++F ++N+GKTLV+RTQGTKIAS+
Sbjct: 1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASD 60
Query: 60 GLKHRVFEVSLADLQGDEDNAFRKIRLRAEDVQGKNLLTNFWGMDFTTDKLRSLVRKWQT 119
GLK RVFEVSLADLQ DE AFRK +L EDVQGKN LTNF GMD T DK+ S+V+KWQT
Sbjct: 61 GLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 120 LIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMINQATSC 179
+IEAHVDVKTTD Y LR+FC+GFTK+R+NQ+++T YAQ Q+RQIR+KM EIM + +
Sbjct: 120 MIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTN 179
Query: 180 DLKDLVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--- 236
DLK++V K IP+ IGK+IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S
Sbjct: 180 DLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSG 239
Query: 237 ----EDVGTKVER 245
++ G KVER
Sbjct: 240 KATGDETGAKVER 252
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 403,221,026
Number of Sequences: 2540612
Number of extensions: 15314786
Number of successful extensions: 41138
Number of sequences better than 10.0: 200
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 40707
Number of HSP's gapped (non-prelim): 224
length of query: 261
length of database: 863,360,394
effective HSP length: 125
effective length of query: 136
effective length of database: 545,783,894
effective search space: 74226609584
effective search space used: 74226609584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)
Medicago: description of AC135798.2