BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135565.1 - phase: 0
(150 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN40022.1| putative cytidine deaminase [Zea mays] 123 1e-27
emb|CAA07230.1| putative cytidine deaminase; putative deoxycytid... 121 4e-27
gb|AAM91493.1| AT5g28050/F15F15_120 [Arabidopsis thaliana] gi|15... 120 9e-27
gb|AAL67435.1| deoxycytidine deaminase [Brassica oleracea] 118 3e-26
ref|XP_470319.1| putative deoxycytidine deaminase [Oryza sativa ... 117 4e-26
gb|AAF27036.1| unknown protein [Arabidopsis thaliana] gi|1522995... 103 6e-22
ref|ZP_00509713.1| Guanine deaminase [Clostridium thermocellum A... 86 2e-16
gb|AAK84461.1| Hypothetical protein R13A5.10 [Caenorhabditis ele... 79 2e-14
emb|CAE64443.1| Hypothetical protein CBG09150 [Caenorhabditis br... 78 4e-14
ref|ZP_00521207.1| Guanine deaminase [Solibacter usitatus Ellin6... 78 5e-14
ref|NP_691305.1| hypothetical protein OB0384 [Oceanobacillus ihe... 76 1e-13
ref|YP_177311.1| guanine deaminase [Bacillus clausii KSM-K16] gi... 76 2e-13
ref|NP_820363.1| cytidine/deoxycytidylate deaminase family prote... 74 9e-13
gb|AAM06774.1| cytidine/deoxycytidylate deaminase family protein... 73 1e-12
ref|NP_967110.1| cytidine/deoxycytidylate deaminase family prote... 73 2e-12
gb|AAQ66735.1| cytidine/deoxycytidylate deaminase family protein... 72 3e-12
ref|NP_634746.1| hypothetical protein MM2722 [Methanosarcina maz... 72 4e-12
ref|NP_389200.1| guanine deaminase [Bacillus subtilis subsp. sub... 72 4e-12
pdb|1WKQ|B Chain B, Crystal Structure Of Bacillus Subtilis Guani... 72 4e-12
dbj|BAB79737.1| conserved hypothetical protein [Clostridium perf... 70 1e-11
>gb|AAN40022.1| putative cytidine deaminase [Zea mays]
Length = 180
Score = 123 bits (308), Expect = 1e-27
Identities = 68/147 (46%), Positives = 87/147 (58%), Gaps = 41/147 (27%)
Query: 1 MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
M L++ +P AHAE+ AIREACKKL K+ L+ CE+Y SCEPCPMCFGA+H S++K
Sbjct: 65 MVLKHTDPIAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGALHLSRIK------ 118
Query: 61 SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIG---KGTDFHK 117
R+VYGA AEAA +IGF ++I +GT F++
Sbjct: 119 -----------------------------RLVYGAKAEAAIAIGFDDFIADALRGTGFYQ 149
Query: 118 ---FEIKKIDGIAAEIAEEVFEKTKDK 141
EIKK DG A IAE+VFEKTK+K
Sbjct: 150 KANMEIKKADGNGALIAEQVFEKTKEK 176
>emb|CAA07230.1| putative cytidine deaminase; putative deoxycytidylate deaminase
[Cicer arietinum]
Length = 186
Score = 121 bits (303), Expect = 4e-27
Identities = 68/147 (46%), Positives = 86/147 (58%), Gaps = 41/147 (27%)
Query: 1 MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
M L +PTAHAE+ AIREACKKL ++ L+ CE+Y SCEPCPMCFGAIH S++K
Sbjct: 71 MVLNYTDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIK------ 124
Query: 61 SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIG---KGTDFH- 116
R+VYGA AEAA +IGF ++I +GT F+
Sbjct: 125 -----------------------------RLVYGAKAEAAIAIGFDDFIADALRGTGFYQ 155
Query: 117 --KFEIKKIDGIAAEIAEEVFEKTKDK 141
+ EIK+ DG A IAEEVF+KTK+K
Sbjct: 156 KAQLEIKRADGNEALIAEEVFQKTKEK 182
>gb|AAM91493.1| AT5g28050/F15F15_120 [Arabidopsis thaliana]
gi|15241124|ref|NP_198157.1| cytidine/deoxycytidylate
deaminase family protein [Arabidopsis thaliana]
gi|14532498|gb|AAK63977.1| AT5g28050/F15F15_120
[Arabidopsis thaliana]
Length = 185
Score = 120 bits (300), Expect = 9e-27
Identities = 67/149 (44%), Positives = 87/149 (57%), Gaps = 41/149 (27%)
Query: 1 MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
M L+ +PTAHAE+ AIREACKKL+K+ L+ CE+Y SCEPCPMCFGAIH S++K
Sbjct: 70 MVLKYTDPTAHAEVTAIREACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLK------ 123
Query: 61 SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIG---KGTDFHK 117
R+VYGA AEAA +IGF ++I +GT ++
Sbjct: 124 -----------------------------RLVYGAKAEAAIAIGFDDFIADALRGTGVYQ 154
Query: 118 ---FEIKKIDGIAAEIAEEVFEKTKDKVK 143
EIKK DG A IAE+VF+ TK+K +
Sbjct: 155 KSSLEIKKADGNGAAIAEQVFQNTKEKFR 183
>gb|AAL67435.1| deoxycytidine deaminase [Brassica oleracea]
Length = 185
Score = 118 bits (296), Expect = 3e-26
Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 41/149 (27%)
Query: 1 MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
M L+ +PTAHAE+ AIREACKKL+++ L+ CE+Y SCEPCPMCFGAIH S++K
Sbjct: 70 MVLKYTDPTAHAEVTAIREACKKLNQIELSECEIYASCEPCPMCFGAIHLSRLK------ 123
Query: 61 SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIG---KGTDFHK 117
R+VYGA AEAA +IGF ++I +GT ++
Sbjct: 124 -----------------------------RLVYGAKAEAAIAIGFDDFIADALRGTGVYQ 154
Query: 118 ---FEIKKIDGIAAEIAEEVFEKTKDKVK 143
EIKK DG A IAE+VF+ TK+K +
Sbjct: 155 KSNLEIKKADGNGAAIAEQVFQNTKEKFR 183
>ref|XP_470319.1| putative deoxycytidine deaminase [Oryza sativa (japonica
cultivar-group)] gi|40714681|gb|AAR88587.1| putative
deoxycytidine deaminase [Oryza sativa (japonica
cultivar-group)]
Length = 186
Score = 117 bits (294), Expect = 4e-26
Identities = 65/149 (43%), Positives = 86/149 (57%), Gaps = 41/149 (27%)
Query: 1 MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
M L +PTAHAE+ AIREACKKL K+ L+ CE+Y SCEPCPMCFGA+H S++K
Sbjct: 71 MVLDYTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIK------ 124
Query: 61 SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIG---KGTDFHK 117
R+VYGA AEAA +IGF ++I +GT +++
Sbjct: 125 -----------------------------RLVYGAKAEAAIAIGFDDFIADALRGTAYYQ 155
Query: 118 ---FEIKKIDGIAAEIAEEVFEKTKDKVK 143
EI++ DG A IAE+VFE TK+K +
Sbjct: 156 KANLEIRRADGNGALIAEQVFENTKEKFR 184
>gb|AAF27036.1| unknown protein [Arabidopsis thaliana] gi|15229953|ref|NP_187181.1|
cytidine/deoxycytidylate deaminase family protein
[Arabidopsis thaliana]
Length = 113
Score = 103 bits (258), Expect = 6e-22
Identities = 61/147 (41%), Positives = 79/147 (53%), Gaps = 44/147 (29%)
Query: 1 MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
M + K+PTAHAE+IAIREACKKL+++ L+ CE+Y SCEPCPMCFGAIH S++K
Sbjct: 1 MVFKYKDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLK------ 54
Query: 61 SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIGKGTD----FH 116
R+VY A EAA +IGF+ + G +H
Sbjct: 55 -----------------------------RLVYEAKVEAALAIGFNRILADGVRGVGCYH 85
Query: 117 --KFEIKKIDGIAAEIAEEVFEKTKDK 141
EI K+D IAE+VF+ TK K
Sbjct: 86 NSNLEITKLD---LSIAEQVFQNTKGK 109
>ref|ZP_00509713.1| Guanine deaminase [Clostridium thermocellum ATCC 27405]
gi|67850042|gb|EAM45629.1| Guanine deaminase
[Clostridium thermocellum ATCC 27405]
Length = 154
Score = 85.9 bits (211), Expect = 2e-16
Identities = 55/146 (37%), Positives = 75/146 (50%), Gaps = 40/146 (27%)
Query: 3 LRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRLSF 62
++N +PT HAE+IAIR+A KKL + L CELY+SCEPCPMCF AIH++K+K
Sbjct: 43 IKNNDPTDHAEMIAIRKAAKKLSRFDLGDCELYSSCEPCPMCFAAIHWAKIK-------- 94
Query: 63 CLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGF-SNYIG---KG-TDFHK 117
++ YG T E A IGF NYI KG TD +
Sbjct: 95 ---------------------------KVYYGCTREDAAKIGFDDNYIYEVIKGETDEKR 127
Query: 118 FEIKKIDGIAAEIAEEVFEKTKDKVK 143
+ + D A A + +E+ +DKV+
Sbjct: 128 VSLVQTDRDACLEAFKEWERKQDKVQ 153
>gb|AAK84461.1| Hypothetical protein R13A5.10 [Caenorhabditis elegans]
gi|17554608|ref|NP_498663.1| deaminase (3I668)
[Caenorhabditis elegans]
Length = 153
Score = 79.0 bits (193), Expect = 2e-14
Identities = 44/118 (37%), Positives = 59/118 (49%), Gaps = 40/118 (33%)
Query: 1 MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
M L K+PTAHAE+ AIR CK +D L+GC+LYTSC PCPMC GA +S+V A
Sbjct: 40 MVLVTKDPTAHAEVTAIRNTCKNVDNFDLSGCQLYTSCYPCPMCMGAALWSRVDA----- 94
Query: 61 SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIGKGTDFHKF 118
+ YGAT++ A +IGF ++ +FH+F
Sbjct: 95 ------------------------------IYYGATSQDAANIGFGDH-----EFHEF 117
>emb|CAE64443.1| Hypothetical protein CBG09150 [Caenorhabditis briggsae]
Length = 153
Score = 78.2 bits (191), Expect = 4e-14
Identities = 44/118 (37%), Positives = 57/118 (48%), Gaps = 40/118 (33%)
Query: 1 MFLRNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKASMRRL 60
M L K+PTAHAE+ AIR CK +D L+GC+LYTSC PCPMC GA +S+V A
Sbjct: 40 MVLVTKDPTAHAEVTAIRNTCKNVDSFDLSGCQLYTSCYPCPMCMGAALWSRVDA----- 94
Query: 61 SFCLHNYTFLQSVLNYIDITYLSYIHIKQRMVYGATAEAARSIGFSNYIGKGTDFHKF 118
+ YGAT+ A IGF ++ +FH+F
Sbjct: 95 ------------------------------IYYGATSSEAAEIGFGDH-----EFHEF 117
>ref|ZP_00521207.1| Guanine deaminase [Solibacter usitatus Ellin6076]
gi|67864761|gb|EAM59765.1| Guanine deaminase
[Solibacter usitatus Ellin6076]
Length = 154
Score = 77.8 bits (190), Expect = 5e-14
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 4 RNKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKA 55
R+ +PTAHAEI+AIREAC+ L L GCE+YT+CEPCPMC GAI++++ A
Sbjct: 44 RSNDPTAHAEIVAIREACRVLGDFQLPGCEIYTTCEPCPMCLGAIYWARPAA 95
>ref|NP_691305.1| hypothetical protein OB0384 [Oceanobacillus iheyensis HTE831]
gi|22776063|dbj|BAC12340.1| hypothetical conserved
protein [Oceanobacillus iheyensis HTE831]
Length = 159
Score = 76.3 bits (186), Expect = 1e-13
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKA 55
+PTAHAE+ AIR+AC+KL L GC LYTSCEPCPMC GAI++++V A
Sbjct: 52 DPTAHAEVQAIRQACEKLSTFELKGCTLYTSCEPCPMCLGAIYWARVDA 100
>ref|YP_177311.1| guanine deaminase [Bacillus clausii KSM-K16]
gi|56911823|dbj|BAD66350.1| guanine deaminase [Bacillus
clausii KSM-K16]
Length = 156
Score = 75.9 bits (185), Expect = 2e-13
Identities = 30/51 (58%), Positives = 41/51 (79%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKA 55
+ +PTAHAE++AIR+AC ++ L GC LYTSCEPCPMC GAI++++ KA
Sbjct: 47 DNDPTAHAEVVAIRDACNTINDFQLEGCTLYTSCEPCPMCLGAIYWARPKA 97
>ref|NP_820363.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
burnetii RSA 493] gi|29541939|gb|AAO90877.1|
cytidine/deoxycytidylate deaminase family protein
[Coxiella burnetii RSA 493]
Length = 159
Score = 73.6 bits (179), Expect = 9e-13
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+ +PTAH+EI+AIREAC+KL+ +L GC LY +CEPCPMC GA +++++
Sbjct: 50 SNDPTAHSEIVAIREACQKLNTFNLTGCYLYVNCEPCPMCLGACYWARI 98
>gb|AAM06774.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina
acetivorans str. C2A] gi|20092219|ref|NP_618294.1|
cytidine/deoxycytidylate deaminase family protein
[Methanosarcina acetivorans C2A]
Length = 162
Score = 73.2 bits (178), Expect = 1e-12
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 7 EPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+PTAHAEI AIREA +KL+ L GCE+Y SCEPCPMC GAI+++++
Sbjct: 55 DPTAHAEISAIREAARKLNAPDLKGCEIYASCEPCPMCLGAIYWARI 101
>ref|NP_967110.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio
bacteriovorus HD100] gi|39574260|emb|CAE77764.1|
cytidine/deoxycytidylate deaminase family protein
[Bdellovibrio bacteriovorus HD100]
Length = 155
Score = 72.8 bits (177), Expect = 2e-12
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVK 54
+ +PTAHAE+ AIR+AC K+ LAG E+YTSCEPCPMC AI++++++
Sbjct: 46 SNDPTAHAEVSAIRDACSKISNFELAGAEIYTSCEPCPMCLSAIYWARIE 95
>gb|AAQ66735.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
gingivalis W83] gi|34541357|ref|NP_905836.1|
cytidine/deoxycytidylate deaminase family protein
[Porphyromonas gingivalis W83]
Length = 150
Score = 72.0 bits (175), Expect = 3e-12
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+ +PTAHAE+ IR ACK+L L+GC +YTSCEPCPMC GAI+++++
Sbjct: 41 DNDPTAHAEVNCIRMACKRLGTFDLSGCTIYTSCEPCPMCLGAIYWARI 89
>ref|NP_634746.1| hypothetical protein MM2722 [Methanosarcina mazei Go1]
gi|20907345|gb|AAM32418.1| hypothetical protein
[Methanosarcina mazei Goe1]
Length = 161
Score = 71.6 bits (174), Expect = 4e-12
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
+ +PTAHAEI AIREA +KL+ L+GC +Y SCEPCPMC GAI+++++
Sbjct: 52 HNDPTAHAEIGAIREAARKLNTFDLSGCSIYISCEPCPMCLGAIYWARI 100
>ref|NP_389200.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168]
gi|2633671|emb|CAB13174.1| guanine deaminase [Bacillus
subtilis subsp. subtilis str. 168]
gi|2632037|emb|CAA05596.1| YkoA [Bacillus subtilis]
gi|23396605|sp|O34598|GUAD_BACSU Guanine deaminase
(Guanase) (Guanine aminase) (Guanine aminohydrolase)
(GAH) (GDEase)
Length = 156
Score = 71.6 bits (174), Expect = 4e-12
Identities = 31/51 (60%), Positives = 39/51 (75%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKA 55
+ +PTAHAE+ AIR+ACK L L C LYTSCEPCPMC GAI++++ KA
Sbjct: 47 SNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKA 97
>pdb|1WKQ|B Chain B, Crystal Structure Of Bacillus Subtilis Guanine Deaminase.
The First Domain-Swapped Structure In The Cytidine
Deaminase Superfamily gi|51248026|pdb|1WKQ|A Chain A,
Crystal Structure Of Bacillus Subtilis Guanine
Deaminase. The First Domain-Swapped Structure In The
Cytidine Deaminase Superfamily
Length = 164
Score = 71.6 bits (174), Expect = 4e-12
Identities = 31/51 (60%), Positives = 39/51 (75%)
Query: 5 NKEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKVKA 55
+ +PTAHAE+ AIR+ACK L L C LYTSCEPCPMC GAI++++ KA
Sbjct: 55 SNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKA 105
>dbj|BAB79737.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|18309013|ref|NP_560947.1| hypothetical protein
CPE0031 [Clostridium perfringens str. 13]
Length = 143
Score = 69.7 bits (169), Expect = 1e-11
Identities = 31/48 (64%), Positives = 38/48 (78%)
Query: 6 KEPTAHAEIIAIREACKKLDKVSLAGCELYTSCEPCPMCFGAIHFSKV 53
K+PTAHAEI+AIREAC KL+ L GCE+Y + EPCPMC GAI S++
Sbjct: 42 KDPTAHAEILAIREACNKLNNWRLHGCEMYVTLEPCPMCAGAILQSRL 89
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,391,859
Number of Sequences: 2540612
Number of extensions: 7924847
Number of successful extensions: 30250
Number of sequences better than 10.0: 437
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 29836
Number of HSP's gapped (non-prelim): 455
length of query: 150
length of database: 863,360,394
effective HSP length: 126
effective length of query: 24
effective length of database: 543,243,282
effective search space: 13037838768
effective search space used: 13037838768
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC135565.1