BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135320.16 + phase: 0
(153 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM64315.1| ferredoxin [Arabidopsis thaliana] 189 9e-48
emb|CAB10268.1| ferredoxin [Arabidopsis thaliana] gi|7268235|emb... 189 1e-47
gb|AAT42183.1| putative ferredoxin [Zea mays] 178 3e-44
ref|XP_469111.1| putative ferredoxin [Oryza sativa (japonica cul... 171 4e-42
dbj|BAB72741.1| ferredoxin [Nostoc sp. PCC 7120] gi|17228279|ref... 104 5e-22
ref|ZP_00160027.1| COG0633: Ferredoxin [Anabaena variabilis ATCC... 100 5e-21
sp|P00248|FER_MASLA Ferredoxin gi|2623659|gb|AAC04840.1| ferredo... 95 4e-19
pdb|1RFK|B Chain B, Crystal Structure Of 2fe2s Ferredoxin From T... 95 4e-19
sp|P00252|FER1_NOSMU Ferredoxin I gi|350985|prf||0812211A ferred... 94 7e-19
pir||JA0098 ferredoxin [2Fe-2S] - Synechococcus sp gi|226374|prf... 94 9e-19
ref|ZP_00514366.1| Ferredoxin [2Fe-2S], plant [Crocosphaera wats... 93 1e-18
emb|CAE07050.1| Ferredoxin [Synechococcus sp. WH 8102] gi|338650... 92 3e-18
emb|CAA71330.1| 2Fe-2S ferredoxin [Synechococcus elongatus] gi|2... 92 3e-18
pdb|2CJO| Structure Of Ferredoxin, Nmr, 10 Structures gi|21939... 92 3e-18
dbj|BAD82633.1| putative ferredoxin [Oryza sativa (japonica cult... 91 4e-18
sp|P00247|FER_CHLFR Ferredoxin gi|350988|prf||0812213A ferredoxi... 91 4e-18
sp|P00255|FER_SYNLI Ferredoxin 91 6e-18
gb|AAM63681.1| putative ferredoxin [Arabidopsis thaliana] gi|289... 91 7e-18
sp|Q51577|FER1_PLEBO Ferredoxin I (FdI) gi|1098684|gb|AAA91131.1... 91 7e-18
sp|P00244|FER1_APHFL Ferredoxin I gi|223646|prf||0905173A ferred... 90 1e-17
>gb|AAM64315.1| ferredoxin [Arabidopsis thaliana]
Length = 154
Score = 189 bits (481), Expect = 9e-48
Identities = 88/106 (83%), Positives = 100/106 (94%)
Query: 48 VRSSYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
V +YKVV+EH+GKTT+LEVEPDETILSKALDSGLDVP+DC LGVCMTCPA+L++GTVDQ
Sbjct: 49 VARAYKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQ 108
Query: 108 SDGMLSDDVVERGYALLCASYPRSDCHIRVIPEDELLSMQLATAND 153
S GMLSDDVVERGY LLCASYP SDCHI++IPE+ELLS+QLATAND
Sbjct: 109 SGGMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELLSLQLATAND 154
>emb|CAB10268.1| ferredoxin [Arabidopsis thaliana] gi|7268235|emb|CAB78531.1|
ferredoxin [Arabidopsis thaliana]
gi|20856284|gb|AAM26657.1| AT4g14890/dl3485w
[Arabidopsis thaliana] gi|16648673|gb|AAL25529.1|
AT4g14890/dl3485w [Arabidopsis thaliana]
gi|15233615|ref|NP_193225.1| ferredoxin family protein
[Arabidopsis thaliana] gi|7430740|pir||B71412 ferredoxin
[2Fe-2S] - Arabidopsis thaliana
Length = 154
Score = 189 bits (480), Expect = 1e-47
Identities = 87/106 (82%), Positives = 100/106 (94%)
Query: 48 VRSSYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
+ +YKVV+EH+GKTT+LEVEPDETILSKALDSGLDVP+DC LGVCMTCPA+L++GTVDQ
Sbjct: 49 IARAYKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQ 108
Query: 108 SDGMLSDDVVERGYALLCASYPRSDCHIRVIPEDELLSMQLATAND 153
S GMLSDDVVERGY LLCASYP SDCHI++IPE+ELLS+QLATAND
Sbjct: 109 SGGMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELLSLQLATAND 154
>gb|AAT42183.1| putative ferredoxin [Zea mays]
Length = 150
Score = 178 bits (451), Expect = 3e-44
Identities = 85/103 (82%), Positives = 94/103 (90%)
Query: 51 SYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSDG 110
+YKV IEH G++ +EVE DETILS+ALD GLDVPHDCKLGVCMTCPARL+SGTVDQSDG
Sbjct: 48 AYKVTIEHGGESRVVEVEEDETILSRALDEGLDVPHDCKLGVCMTCPARLVSGTVDQSDG 107
Query: 111 MLSDDVVERGYALLCASYPRSDCHIRVIPEDELLSMQLATAND 153
MLSDDVV RGYALLCA+YPRSDC IRVIPEDELL +QLATA+D
Sbjct: 108 MLSDDVVARGYALLCAAYPRSDCTIRVIPEDELLKVQLATADD 150
>ref|XP_469111.1| putative ferredoxin [Oryza sativa (japonica cultivar-group)]
gi|27764670|gb|AAO23095.1| putative ferredoxin [Oryza
sativa (japonica cultivar-group)]
Length = 147
Score = 171 bits (432), Expect = 4e-42
Identities = 81/103 (78%), Positives = 92/103 (88%)
Query: 51 SYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSDG 110
+YKV IEH G++ +EVE ETILS+ALD G+DVPHDCKLGVCMTCPARL++G VDQSDG
Sbjct: 45 AYKVTIEHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDG 104
Query: 111 MLSDDVVERGYALLCASYPRSDCHIRVIPEDELLSMQLATAND 153
MLSDDVV +GYALLCASYPRSDC IRVIPEDELL +QLATA+D
Sbjct: 105 MLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLATADD 147
>dbj|BAB72741.1| ferredoxin [Nostoc sp. PCC 7120] gi|17228279|ref|NP_484827.1|
ferredoxin [Nostoc sp. PCC 7120] gi|25282667|pir||AF1904
ferredoxin [imported] - Nostoc sp. (strain PCC 7120)
Length = 104
Score = 104 bits (259), Expect = 5e-22
Identities = 52/98 (53%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 51 SYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSDG 110
+Y V I H+GKT L+V D+TILS A + GLD+P C GVC TC ++I+GTVDQSDG
Sbjct: 4 TYTVEILHQGKTHTLQVPEDKTILSVADEQGLDLPSSCHAGVCTTCAGQIITGTVDQSDG 63
Query: 111 M-LSDDVVERGYALLCASYPRSDCHIRVIPEDELLSMQ 147
M +S ++ ++GYALLC +YPRSD I ED + MQ
Sbjct: 64 MGVSPELQQQGYALLCVAYPRSDLKIETEKEDTVYQMQ 101
>ref|ZP_00160027.1| COG0633: Ferredoxin [Anabaena variabilis ATCC 29413]
Length = 104
Score = 100 bits (250), Expect = 5e-21
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 51 SYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSDG 110
+Y V I H+GKT L+V D+TILS A + GLD+P C GVC TC ++I+GTVDQ+DG
Sbjct: 4 TYTVEILHQGKTHTLQVPEDKTILSVADEQGLDLPSSCHAGVCTTCAGQIITGTVDQTDG 63
Query: 111 M-LSDDVVERGYALLCASYPRSDCHIRVIPEDELLSMQ 147
M +S ++ ++GYALLC +YPRSD I ED + Q
Sbjct: 64 MGVSPELQQQGYALLCVAYPRSDLKIETEKEDTVYQKQ 101
>sp|P00248|FER_MASLA Ferredoxin gi|2623659|gb|AAC04840.1| ferredoxin [Fischerella sp.
PCC 7605]
Length = 99
Score = 94.7 bits (234), Expect = 4e-19
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
++YKV + E EG +EV D+ IL A ++G+D+P+ C+ G C TC +LISGTVDQ
Sbjct: 2 ATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQ 61
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SDC I E+EL
Sbjct: 62 SDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98
>pdb|1RFK|B Chain B, Crystal Structure Of 2fe2s Ferredoxin From Thermophilic
Cyanobacterium Mastigocladus Laminosus
gi|66360067|pdb|1RFK|A Chain A, Crystal Structure Of
2fe2s Ferredoxin From Thermophilic Cyanobacterium
Mastigocladus Laminosus
Length = 98
Score = 94.7 bits (234), Expect = 4e-19
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
++YKV + E EG +EV D+ IL A ++G+D+P+ C+ G C TC +LISGTVDQ
Sbjct: 1 ATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SDC I E+EL
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 97
>sp|P00252|FER1_NOSMU Ferredoxin I gi|350985|prf||0812211A ferredoxin I
Length = 98
Score = 94.0 bits (232), Expect = 7e-19
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 52 YKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSD- 109
YKV +++ EG T ++V DE IL A D GLD+P+ C+ G C TC +++SGTVDQSD
Sbjct: 4 YKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQ 63
Query: 110 GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
L DD +E+GY L C +YP SD I E++L
Sbjct: 64 SFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 97
>pir||JA0098 ferredoxin [2Fe-2S] - Synechococcus sp gi|226374|prf||1508255A
ferredoxin
Length = 98
Score = 93.6 bits (231), Expect = 9e-19
Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
+SYKV + E EG +EV D+ IL A + G+D+P+ C+ G C TC +L SGTVDQ
Sbjct: 1 ASYKVTLVNESEGLNKTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKLTSGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E G+ L C +YP SDC I+ E+EL
Sbjct: 61 SDQSFLDDDQIEAGFVLTCVAYPTSDCTIKTHTEEEL 97
>ref|ZP_00514366.1| Ferredoxin [2Fe-2S], plant [Crocosphaera watsonii WH 8501]
gi|67856964|gb|EAM52204.1| Ferredoxin [2Fe-2S], plant
[Crocosphaera watsonii WH 8501]
Length = 105
Score = 92.8 bits (229), Expect = 1e-18
Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 50 SSYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSD 109
++Y V I H+G T +EV D+ +L A ++G+D+P C+ GVC +C +L+ G V+QSD
Sbjct: 3 NTYTVEIHHQGNTQTIEVPEDQKVLVAAREAGIDLPISCEAGVCTSCAGKLLEGEVEQSD 62
Query: 110 GM-LSDDVVERGYALLCASYPRSDCHIRVIPEDELLSMQ 147
GM LS ++ GYALLC SYPRS+ + E+E+ S Q
Sbjct: 63 GMGLSPELQGEGYALLCVSYPRSNLVVETEKEEEVYSRQ 101
>emb|CAE07050.1| Ferredoxin [Synechococcus sp. WH 8102] gi|33865071|ref|NP_896630.1|
Ferredoxin [Synechococcus sp. WH 8102]
Length = 99
Score = 91.7 bits (226), Expect = 3e-18
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
+SYKV + E EG +EV D+ IL A + G+D+P+ C+ G C TC ++ +GTVDQ
Sbjct: 2 ASYKVTLVSESEGLNKTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQ 61
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E G+ L C +YP SDC I+ E+EL
Sbjct: 62 SDQSFLDDDQIEAGFVLTCVAYPTSDCTIKTHAEEEL 98
>emb|CAA71330.1| 2Fe-2S ferredoxin [Synechococcus elongatus]
gi|22298552|ref|NP_681799.1| ferredoxin I
[Thermosynechococcus elongatus BP-1]
gi|61223977|sp|P0A3D1|FER_SYNVU Ferredoxin I
gi|61223976|sp|P0A3D0|FER_SYNEN Ferredoxin I
gi|61223973|sp|P0A3C9|FER_SYNEL Ferredoxin I
gi|22294732|dbj|BAC08561.1| ferredoxin I
[Thermosynechococcus elongatus BP-1]
gi|2696967|dbj|BAA24021.1| ferredoxin I [Synechococcus
vulcanus]
Length = 98
Score = 91.7 bits (226), Expect = 3e-18
Identities = 44/96 (45%), Positives = 61/96 (62%), Gaps = 2/96 (2%)
Query: 50 SSYKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108
++YKV ++ +G T ++V DE IL A + GLD+P C+ G C TC +L+ G VDQS
Sbjct: 2 ATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQS 61
Query: 109 D-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
D L DD +E+G+ L C +YPRSDC I E+EL
Sbjct: 62 DQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>pdb|2CJO| Structure Of Ferredoxin, Nmr, 10 Structures gi|2193977|pdb|2CJN|
Structure Of Ferredoxin, Nmr, Minimized Average
Structure gi|1633515|pdb|1ROE| Nmr Study Of 2fe-2s
Ferredoxin Of Synechococcus Elongatus
gi|223645|prf||0905172A ferredoxin
Length = 97
Score = 91.7 bits (226), Expect = 3e-18
Identities = 44/96 (45%), Positives = 61/96 (62%), Gaps = 2/96 (2%)
Query: 50 SSYKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108
++YKV ++ +G T ++V DE IL A + GLD+P C+ G C TC +L+ G VDQS
Sbjct: 1 ATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQS 60
Query: 109 D-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
D L DD +E+G+ L C +YPRSDC I E+EL
Sbjct: 61 DQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 96
>dbj|BAD82633.1| putative ferredoxin [Oryza sativa (japonica cultivar-group)]
gi|56784805|dbj|BAD82026.1| putative ferredoxin [Oryza
sativa (japonica cultivar-group)]
Length = 165
Score = 91.3 bits (225), Expect = 4e-18
Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 24 PSQLNTRP---RLGSGSHPSSPSLTFTVRSSYKV-VIEHEGKTTQLEVEPDETILSKALD 79
P +L +RP +L SG S + + +KV +I +G ++LEV D +L A +
Sbjct: 40 PPKLLSRPGNLQLTSGGARFSGRFRASAAAVHKVKLIGPDGAESELEVPEDTYVLDAAEE 99
Query: 80 SGLDVPHDCKLGVCMTCPARLISGTVDQSDG-MLSDDVVERGYALLCASYPRSDCHIRVI 138
+GL++P+ C+ G C TC +L SG VDQSDG L+D+ +E+GY L C SYP+SDC I
Sbjct: 100 AGLELPYSCRAGSCSTCAGKLASGEVDQSDGSFLADEQIEQGYVLTCISYPKSDCVIYTH 159
Query: 139 PEDEL 143
E+E+
Sbjct: 160 KEEEV 164
>sp|P00247|FER_CHLFR Ferredoxin gi|350988|prf||0812213A ferredoxin
gi|223423|prf||0805212A ferredoxin
Length = 98
Score = 91.3 bits (225), Expect = 4e-18
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 50 SSYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQ 107
++YKV + + EG +EV+ D IL A ++GLD+P+ C+ G C TC ++ SGTVDQ
Sbjct: 1 ATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQ 60
Query: 108 SD-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
SD L DD +E GY L C +YP SDC I E+EL
Sbjct: 61 SDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 97
>sp|P00255|FER_SYNLI Ferredoxin
Length = 96
Score = 90.9 bits (224), Expect = 6e-18
Identities = 43/95 (45%), Positives = 58/95 (60%), Gaps = 1/95 (1%)
Query: 50 SSYKVVIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQSD 109
++YKV + T ++V DE IL A + GLD+P C+ G C TC +L+ G VDQSD
Sbjct: 1 ATYKVTLVRPDGETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSD 60
Query: 110 -GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
L DD +E+G+ L C +YPRSDC I E+EL
Sbjct: 61 QSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEEEL 95
>gb|AAM63681.1| putative ferredoxin [Arabidopsis thaliana]
gi|28972977|gb|AAO63813.1| putative ferredoxin
[Arabidopsis thaliana] gi|28393572|gb|AAO42206.1|
putative ferredoxin [Arabidopsis thaliana]
gi|4314392|gb|AAD15602.1| putative ferredoxin
[Arabidopsis thaliana] gi|15225888|ref|NP_180320.1|
ferredoxin, putative [Arabidopsis thaliana]
gi|25282678|pir||G84673 probable ferredoxin [imported] -
Arabidopsis thaliana
Length = 155
Score = 90.5 bits (223), Expect = 7e-18
Identities = 43/99 (43%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 47 TVRSSYKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTV 105
T+ + YKV ++ +G+ + EV+ D+ IL A ++G+D+P+ C+ G C TC +++SG V
Sbjct: 56 TMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNV 115
Query: 106 DQSDG-MLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
DQSDG L D +E+GY L C +YP+SDC I E EL
Sbjct: 116 DQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154
>sp|Q51577|FER1_PLEBO Ferredoxin I (FdI) gi|1098684|gb|AAA91131.1| PetF1
gi|3513358|dbj|BAA32604.1| ferredoxin [Plectonema
boryanum]
Length = 99
Score = 90.5 bits (223), Expect = 7e-18
Identities = 44/96 (45%), Positives = 60/96 (61%), Gaps = 3/96 (3%)
Query: 51 SYKVVI--EHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108
S+KV + E EG T +EV DE IL A + G+D+P+ C+ G C TC ++ +GTVDQS
Sbjct: 3 SFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQS 62
Query: 109 D-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
D L DD ++ GY L C +YP SDC I E++L
Sbjct: 63 DQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98
>sp|P00244|FER1_APHFL Ferredoxin I gi|223646|prf||0905173A ferredoxin I
Length = 97
Score = 90.1 bits (222), Expect = 1e-17
Identities = 44/96 (45%), Positives = 62/96 (63%), Gaps = 2/96 (2%)
Query: 50 SSYKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108
++YKV +I+ EG TT ++ D IL A ++GLD+P+ C+ G C TC +L++GT+DQS
Sbjct: 1 ATYKVTLIDAEGTTTTIDCPDDTYILDAAEEAGLDLPYSCRAGACSTCAGKLVTGTIDQS 60
Query: 109 D-GMLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143
D L DD VE GY L C +YP SD I E++L
Sbjct: 61 DQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEEDL 96
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 258,143,317
Number of Sequences: 2540612
Number of extensions: 10325506
Number of successful extensions: 26630
Number of sequences better than 10.0: 905
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 25519
Number of HSP's gapped (non-prelim): 913
length of query: 153
length of database: 863,360,394
effective HSP length: 129
effective length of query: 24
effective length of database: 535,621,446
effective search space: 12854914704
effective search space used: 12854914704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC135320.16