BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135319.8 - phase: 0 /pseudo
(271 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP31248.1| transposase [Fusarium oxysporum f. sp. melonis] 138 2e-31
gb|AAW42067.1| conserved hypothetical protein [Cryptococcus neof... 104 2e-21
gb|EAL17593.1| hypothetical protein CNBM0450 [Cryptococcus neofo... 104 2e-21
gb|AAW44911.1| conserved hypothetical protein [Cryptococcus neof... 104 2e-21
gb|AAW44276.1| conserved hypothetical protein [Cryptococcus neof... 104 2e-21
ref|XP_464968.1| putative far-red impaired response protein [Ory... 101 2e-20
ref|XP_463702.1| putative far-red impaired response protein [Ory... 98 3e-19
dbj|BAD87203.1| far-red impaired response-like [Oryza sativa (ja... 98 3e-19
dbj|BAD29601.1| putative far-red impaired response protein [Oryz... 97 5e-19
emb|CAE02137.2| OSJNBa0074L08.5 [Oryza sativa (japonica cultivar... 95 2e-18
ref|XP_471803.1| OSJNBa0050F15.2 [Oryza sativa (japonica cultiva... 94 3e-18
ref|NP_915530.1| P0529E05.9 [Oryza sativa (japonica cultivar-gro... 92 1e-17
ref|XP_482508.1| putative far-red impaired response protein [Ory... 91 3e-17
gb|AAW41060.1| conserved hypothetical protein [Cryptococcus neof... 89 1e-16
ref|NP_908529.1| P0702D12.15 [Oryza sativa (japonica cultivar-gr... 89 1e-16
gb|AAU10761.1| unknown protein [Oryza sativa (japonica cultivar-... 88 3e-16
ref|XP_481410.1| far-red impaired response protein -like [Oryza ... 87 6e-16
dbj|BAD81770.1| putative far-red impaired response protein [Oryz... 87 6e-16
gb|AAQ56575.1| putative transposase [Oryza sativa (japonica cult... 87 6e-16
emb|CAE02218.2| OSJNBb0002N06.8 [Oryza sativa (japonica cultivar... 86 8e-16
>gb|AAP31248.1| transposase [Fusarium oxysporum f. sp. melonis]
Length = 836
Score = 138 bits (347), Expect = 2e-31
Identities = 88/271 (32%), Positives = 142/271 (51%), Gaps = 9/271 (3%)
Query: 6 CERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRENNAWKLTILNGVH----NHEMVR 61
C+R G ++P + + T +R+ GCLF V W L G H NHE
Sbjct: 61 CDR-GAGRIPSLSDRRQTT-TRRTGCLFSVLAKESLCKTIWSLRHRPGPHFSQHNHEPSF 118
Query: 62 YVAGHLLAGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRKESITNIKQVYNERHKFKKT 121
H +L ++ V+ LT++ + PK I + L+ T + +YN K ++
Sbjct: 119 SEVAHPTLRQLSRQEEITVNQLTNAGIAPKEIGSFLRITSNTLATQ-QDIYNCIAKGRRD 177
Query: 122 KRGDLTEMQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSVKLFNTFPTVLIMDSTY 181
+ + L +L E G+ + + ES V + + HP S++ T+P VLI+DSTY
Sbjct: 178 LSKGQSNIHALADQLNEEGFWNRIC-LDESSRVTAVLFAHPKSLEYLKTYPEVLILDSTY 236
Query: 182 KTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLEP-NSDMPKVVV 240
KTN ++MPL +IVGV + T+ + F+F++ E+E +FTWALQ L + E N +P V++
Sbjct: 237 KTNRFKMPLLDIVGVDACQRTFCIAFAFLSGEEEGDFTWALQALRSVYEDHNIGLPSVIL 296
Query: 241 TNRDPSMMKAVTNALPDSSAILCYFHVGKNV 271
T+R + M AV++ P S+ LC +H+ K V
Sbjct: 297 TDRCLACMNAVSSCFPGSALFLCLWHINKAV 327
>gb|AAW42067.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21] gi|50260537|gb|EAL23192.1|
hypothetical protein CNBA5360 [Cryptococcus neoformans
var. neoformans B-3501A] gi|50259285|gb|EAL21958.1|
hypothetical protein CNBC0980 [Cryptococcus neoformans
var. neoformans B-3501A] gi|50256296|gb|EAL19021.1|
hypothetical protein CNBH1230 [Cryptococcus neoformans
var. neoformans B-3501A] gi|57229113|gb|AAW45547.1|
conserved hypothetical protein [Cryptococcus neoformans
var. neoformans JEC21] gi|58271396|ref|XP_572854.1|
conserved hypothetical protein [Cryptococcus neoformans
var. neoformans JEC21] gi|58264436|ref|XP_569374.1|
conserved hypothetical protein [Cryptococcus neoformans
var. neoformans JEC21]
Length = 932
Score = 104 bits (260), Expect = 2e-21
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 22/281 (7%)
Query: 3 ELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRE--------NNAWKLTILNGV 54
E C R K V+ ++ K GC F + + E + W ++N
Sbjct: 148 EYRCTRGDSFK----DVRIRTIQTVKNGCPFAAVAWEMAEAEVKEHGGDKCWTWKVVNAS 203
Query: 55 HNHEMVRYVAGHLL--AGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRKESITNIKQVY 112
HNH V + LL A R E K++++ L DS +I++ + ++ + + ++
Sbjct: 204 HNHPPVANIGIALLRRASRTPEA-KELINTLIDSRTPFPSIISTMSQRFPTVMLTSEDLH 262
Query: 113 NERHKFKKTKRGDLTEMQYLISKLEENGYVH--YVREKPESQTVQDIFWTHPTSVKLFNT 170
+ + R + I +L N +H +V + E + + +T T+ L +
Sbjct: 263 RLAFRRRADLRAGSSASAACIRQLVSNDELHRPFVNTRDE---LIGLVYTKRTARALIHR 319
Query: 171 FPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLE 230
FP VL D TYKTNLYRMP+ IVG TST +TY+ M E + +T AL +L+
Sbjct: 320 FPEVLFFDCTYKTNLYRMPMLHIVGSTSTGMTYTAGVILMLRETTNWYTQALNSFFELV- 378
Query: 231 PNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKNV 271
KVV+T+RDP+++ A+ + LP + C++H+ +NV
Sbjct: 379 -GKPDVKVVITDRDPALINALMSVLPKAYRFSCFWHLQENV 418
>gb|EAL17593.1| hypothetical protein CNBM0450 [Cryptococcus neoformans var.
neoformans B-3501A] gi|57226908|gb|AAW43368.1| conserved
hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21] gi|58267038|ref|XP_570675.1| conserved
hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 580
Score = 104 bits (260), Expect = 2e-21
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 22/281 (7%)
Query: 3 ELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRE--------NNAWKLTILNGV 54
E C R K V+ ++ K GC F + + E + W ++N
Sbjct: 148 EYRCTRGDSFK----DVRIRTIQTVKNGCPFAAVAWEMAEAEVKEHGGDKCWTWKVVNAS 203
Query: 55 HNHEMVRYVAGHLL--AGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRKESITNIKQVY 112
HNH V + LL A R E K++++ L DS +I++ + ++ + + ++
Sbjct: 204 HNHPPVANIGIALLRRASRTPEA-KELINTLIDSRTPFPSIISTMSQRFPTVMLTSEDLH 262
Query: 113 NERHKFKKTKRGDLTEMQYLISKLEENGYVH--YVREKPESQTVQDIFWTHPTSVKLFNT 170
+ + R + I +L N +H +V + E + + +T T+ L +
Sbjct: 263 RLAFRRRADLRAGSSASAACIRQLVSNDELHRPFVNTRDE---LIGLVYTKRTARALIHR 319
Query: 171 FPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLE 230
FP VL D TYKTNLYRMP+ IVG TST +TY+ M E + +T AL +L+
Sbjct: 320 FPEVLFFDCTYKTNLYRMPMLHIVGSTSTGMTYTAGVILMLRETTNWYTQALNSFFELV- 378
Query: 231 PNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKNV 271
KVV+T+RDP+++ A+ + LP + C++H+ +NV
Sbjct: 379 -GKPDVKVVITDRDPALINALMSVLPKAYRFSCFWHLQENV 418
>gb|AAW44911.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21] gi|58270124|ref|XP_572218.1| conserved
hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 920
Score = 104 bits (260), Expect = 2e-21
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 22/281 (7%)
Query: 3 ELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRE--------NNAWKLTILNGV 54
E C R K V+ ++ K GC F + + E + W ++N
Sbjct: 148 EYRCTRGDSFK----DVRIRTIQTVKNGCPFAAVAWEMAEAEVKEHGGDKCWTWKVVNAS 203
Query: 55 HNHEMVRYVAGHLL--AGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRKESITNIKQVY 112
HNH V + LL A R E K++++ L DS +I++ + ++ + + ++
Sbjct: 204 HNHPPVANIGIALLRRASRTPEA-KELINTLIDSRTPFPSIISTMSQRFPTVMLTSEDLH 262
Query: 113 NERHKFKKTKRGDLTEMQYLISKLEENGYVH--YVREKPESQTVQDIFWTHPTSVKLFNT 170
+ + R + I +L N +H +V + E + + +T T+ L +
Sbjct: 263 RLAFRRRADLRAGSSASAACIRQLVSNDELHRPFVNTRDE---LIGLVYTKRTARALIHR 319
Query: 171 FPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLE 230
FP VL D TYKTNLYRMP+ IVG TST +TY+ M E + +T AL +L+
Sbjct: 320 FPEVLFFDCTYKTNLYRMPMLHIVGSTSTGMTYTAGVILMLRETTNWYTQALNSFFELV- 378
Query: 231 PNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKNV 271
KVV+T+RDP+++ A+ + LP + C++H+ +NV
Sbjct: 379 -GKPDVKVVITDRDPALINALMSVLPKAYRFSCFWHLQENV 418
>gb|AAW44276.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21] gi|58268854|ref|XP_571583.1| conserved
hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 895
Score = 104 bits (260), Expect = 2e-21
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 22/281 (7%)
Query: 3 ELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRE--------NNAWKLTILNGV 54
E C R K V+ ++ K GC F + + E + W ++N
Sbjct: 148 EYRCTRGDSFK----DVRIRTIQTVKNGCPFAAVAWEMAEAEVKEHGGDKCWTWKVVNAS 203
Query: 55 HNHEMVRYVAGHLL--AGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRKESITNIKQVY 112
HNH V + LL A R E K++++ L DS +I++ + ++ + + ++
Sbjct: 204 HNHPPVANIGIALLRRASRTPEA-KELINTLIDSRTPFPSIISTMSQRFPTVMLTSEDLH 262
Query: 113 NERHKFKKTKRGDLTEMQYLISKLEENGYVH--YVREKPESQTVQDIFWTHPTSVKLFNT 170
+ + R + I +L N +H +V + E + + +T T+ L +
Sbjct: 263 RLAFRRRADLRAGSSASAACIRQLVSNDELHRPFVNTRDE---LIGLVYTKRTARALIHR 319
Query: 171 FPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLE 230
FP VL D TYKTNLYRMP+ IVG TST +TY+ M E + +T AL +L+
Sbjct: 320 FPEVLFFDCTYKTNLYRMPMLHIVGSTSTGMTYTAGVILMLRETTNWYTQALNSFFELV- 378
Query: 231 PNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKNV 271
KVV+T+RDP+++ A+ + LP + C++H+ +NV
Sbjct: 379 -GKPDVKVVITDRDPALINALMSVLPKAYRFSCFWHLQENV 418
>ref|XP_464968.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)] gi|47848338|dbj|BAD22200.1| putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)] gi|47847707|dbj|BAD21486.1|
putative far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 934
Score = 101 bits (252), Expect = 2e-20
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 27/281 (9%)
Query: 4 LVCERSGEHKLPKT------KVKHEATESRKCGCLFKVRGYVVRENNAWKLTILNGVHNH 57
L C +SG+ KL K+ K + E +C K R V + W+ T + HNH
Sbjct: 316 LECNKSGKMKLTKSSENPMKKRRSNLVEKTQC----KARVIVKLDKGEWEFTAVRHEHNH 371
Query: 58 EM------VRYVAGHLLAGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRKESITNIKQV 111
+ R++ H ++ +K + L + V PK I+ +K R +I
Sbjct: 372 PLCPSPLLARFIVDHK---QMSTGEKSFLRVLQQNRVPPKKIMKIFRKLRV-CFGDIPFE 427
Query: 112 YNERHKFKKTKR----GDLTEMQYLISKLE-ENGYVHYVREKPESQTVQDIFWTHPTSVK 166
+ H +T+ D+ ++L+ +N YV +K E TV IFWT
Sbjct: 428 NKDEHNIAQTEHRKANSDVESALKHFTELQIQNPEFLYVMQKDEDNTVTSIFWTDARLRI 487
Query: 167 LFNTFPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLL 226
++ F +++ D+ Y T++Y MP I+G+ S + + + + EK + F W L+ L
Sbjct: 488 EYDIFGDLIMFDAAYSTDMYNMPFVPIIGINSHATPFLLGCALLKDEKVETFEWMLRTFL 547
Query: 227 KLLEPNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHV 267
+++ MP+ V+TN+D SM KA +P C HV
Sbjct: 548 QVM--GGKMPRAVITNQDTSMEKAFAELMPHVRLRFCKRHV 586
>ref|XP_463702.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)]
Length = 1114
Score = 97.8 bits (242), Expect = 3e-19
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 31/284 (10%)
Query: 6 CERSGEHKLPKTKVKHEATESRK--------CGCLFKVRGYVVRENNAWKLTILNGVHNH 57
C R G++ + K K + + R C C+ VR E + W++ +N HNH
Sbjct: 401 CYRYGKNDDGQKKKKKKTQQQRNTQVIDRTDCKCMLTVR----LEGDVWRILSMNLNHNH 456
Query: 58 EMVRYVAGHLLAGR--LMEDDKKIVHDLTDSLVKPKNILTNLKKKR---------KESIT 106
+ L + +++KK++ L + +N+++ L R ++ ++
Sbjct: 457 TLTPNREAKFLRSHKHMTDEEKKLIRTLKQCNIPTRNMISILSFLRGGIAALPYTRKDVS 516
Query: 107 NIKQVYNERHKFKKTKRGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSV 165
N+ N +T+ D+ + M+YL K ++ +Y E+ V+ +FWT S
Sbjct: 517 NVGTAINS-----ETRNTDMNQVMEYLRQKEAKDPGYYYKLTLDENNKVKSMFWTDGRST 571
Query: 166 KLFNTFPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQML 225
+L+ + + D+TYKTN Y MP IVGVT +F+ E + F W +
Sbjct: 572 QLYEQYGEFVSFDTTYKTNRYNMPFAPIVGVTGHGNICIFACAFLGDETTETFKWVFETF 631
Query: 226 LKLLEPNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGK 269
L + P+ ++T++D +M A+ P+S C FH+ K
Sbjct: 632 LTAM--GGKHPETIITDQDLAMRAAIRQVFPNSKHRNCLFHILK 673
>dbj|BAD87203.1| far-red impaired response-like [Oryza sativa (japonica
cultivar-group)]
Length = 1130
Score = 97.8 bits (242), Expect = 3e-19
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 31/284 (10%)
Query: 6 CERSGEHKLPKTKVKHEATESRK--------CGCLFKVRGYVVRENNAWKLTILNGVHNH 57
C R G++ + K K + + R C C+ VR E + W++ +N HNH
Sbjct: 417 CYRYGKNDDGQKKKKKKTQQQRNTQVIDRTDCKCMLTVR----LEGDVWRILSMNLNHNH 472
Query: 58 EMVRYVAGHLLAGR--LMEDDKKIVHDLTDSLVKPKNILTNLKKKR---------KESIT 106
+ L + +++KK++ L + +N+++ L R ++ ++
Sbjct: 473 TLTPNREAKFLRSHKHMTDEEKKLIRTLKQCNIPTRNMISILSFLRGGIAALPYTRKDVS 532
Query: 107 NIKQVYNERHKFKKTKRGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSV 165
N+ N +T+ D+ + M+YL K ++ +Y E+ V+ +FWT S
Sbjct: 533 NVGTAINS-----ETRNTDMNQVMEYLRQKEAKDPGYYYKLTLDENNKVKSMFWTDGRST 587
Query: 166 KLFNTFPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQML 225
+L+ + + D+TYKTN Y MP IVGVT +F+ E + F W +
Sbjct: 588 QLYEQYGEFVSFDTTYKTNRYNMPFAPIVGVTGHGNICIFACAFLGDETTETFKWVFETF 647
Query: 226 LKLLEPNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGK 269
L + P+ ++T++D +M A+ P+S C FH+ K
Sbjct: 648 LTAM--GGKHPETIITDQDLAMRAAIRQVFPNSKHRNCLFHILK 689
>dbj|BAD29601.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)] gi|50251625|dbj|BAD29488.1| putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 688
Score = 97.1 bits (240), Expect = 5e-19
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 15/281 (5%)
Query: 3 ELVCERSGEHKLP---KTKVKHEATESRKCGCLFKVRGYVVRENNAWKLTILNGVHNHEM 59
+ VC G +L +T+ K E CGCL K+ E W + + H HE+
Sbjct: 59 QFVCSCEGYRELKHFERTERKREPRALTHCGCLAKLEIERNEEKGVWFVKEFDNQHTHEL 118
Query: 60 VR--YVAGHLLAGRLMEDDKKI-VHDLTDSLVKPKNILTNLKKKRKESITN---IKQVYN 113
+VA L R+M D KK +L S ++P ++ ++ E +K +YN
Sbjct: 119 ANPDHVA-FLGVHRVMSDSKKAQAVELRMSGLRPFQVMEVMENNHDELDEVGFVMKDLYN 177
Query: 114 --ERHKFKKTKRGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSVKLFNT 170
R++ K K D + ++YL K EE+ + E ++++FW S +
Sbjct: 178 FFTRYEMKNIKGHDAEDVLKYLTRKQEEDAEFFFKYTTDEEGRLRNVFWADAESRLDYAA 237
Query: 171 FPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLE 230
F V+I DSTY+ N Y +P +GV T ++ E +++ W L+ L+ +
Sbjct: 238 FGGVVIFDSTYRVNKYNLPFIPFIGVNHHRSTTIFGCGILSNESVNSYCWLLETFLEAM- 296
Query: 231 PNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKNV 271
PK ++T+ D +M KA++ +P + LC +H+ +N+
Sbjct: 297 -RQVHPKSLITDGDLAMAKAISKVMPGAYHRLCTWHIEENM 336
>emb|CAE02137.2| OSJNBa0074L08.5 [Oryza sativa (japonica cultivar-group)]
gi|50926620|ref|XP_473257.1| OSJNBa0074L08.5 [Oryza
sativa (japonica cultivar-group)]
Length = 1061
Score = 95.1 bits (235), Expect = 2e-18
Identities = 68/284 (23%), Positives = 125/284 (43%), Gaps = 31/284 (10%)
Query: 6 CERSGEHKLPKTKVKHEATESRK--------CGCLFKVRGYVVRENNAWKLTILNGVHNH 57
C R G++ + K K + + R C C+ VR + + W++ +N HNH
Sbjct: 348 CYRYGKNDDGQKKKKKKTQQQRNTQVIDRTDCKCMLTVR----LDGDVWRILSMNLNHNH 403
Query: 58 EMVRYVAGHLLAGR--LMEDDKKIVHDLTDSLVKPKNILTNLKKKRK---------ESIT 106
+ L + +++KK++ L + +N+++ L R + ++
Sbjct: 404 TLTPNREAKFLRSHKHMTDEEKKLIRTLKQCNIPTRNMISILSFLRGGIAALPYTGKDVS 463
Query: 107 NIKQVYNERHKFKKTKRGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSV 165
N+ N +T+ D+ + M+YL K ++ +Y E+ V+ +FWT S
Sbjct: 464 NVGTAINS-----ETRNTDMNQVMEYLRQKEAKDPGYYYKLTLDENNKVKSMFWTDGRST 518
Query: 166 KLFNTFPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQML 225
+L+ + + D+TYKTN Y MP IVGVT +F+ E + F W +
Sbjct: 519 QLYEQYGEFVSFDTTYKTNRYNMPFAPIVGVTGHGNICIFACAFLGDETTETFKWVFETF 578
Query: 226 LKLLEPNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGK 269
L + P+ ++T++D +M A+ P+S C FH+ K
Sbjct: 579 LTAM--GGKHPETIITDQDLAMRAAIRQVFPNSKHRNCLFHILK 620
>ref|XP_471803.1| OSJNBa0050F15.2 [Oryza sativa (japonica cultivar-group)]
gi|38345091|emb|CAD40514.2| OSJNBa0050F15.2 [Oryza
sativa (japonica cultivar-group)]
Length = 688
Score = 94.4 bits (233), Expect = 3e-18
Identities = 73/281 (25%), Positives = 127/281 (44%), Gaps = 15/281 (5%)
Query: 3 ELVCERSGEHKLPKTKVKHEATESR---KCGCLFKVRGYVVRENNAWKLTILNGVHNHEM 59
+ VC G +L + E R +CGCL K+ E W + + H HE+
Sbjct: 59 QFVCSCEGYRELKHFERTERIREPRALTRCGCLAKLEIERNEEKGVWFVKEFDNQHTHEL 118
Query: 60 VR--YVAGHLLAGRLMEDDKKI-VHDLTDSLVKPKNILTNLKKKRKESITN---IKQVYN 113
+VA L R+M D KK +L S ++P ++ ++ E +K +YN
Sbjct: 119 ANPDHVA-FLGVHRVMSDSKKAQAVELRMSGLRPFQVMEVMENNHDELDEVGFVMKDLYN 177
Query: 114 --ERHKFKKTKRGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSVKLFNT 170
R+ K K D + ++YL K EE+ + E ++++FW S +
Sbjct: 178 FFTRYDMKNIKGHDAEDVLKYLTRKQEEDAEFFFKYTTDEEGRLRNVFWADAESRLDYAA 237
Query: 171 FPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLE 230
F V+I DSTY+ N Y +P +GV T ++ E +++ W L+ L+ +
Sbjct: 238 FGGVVIFDSTYRVNKYNLPFIPFIGVNHHRSTTIFGCGILSNESVNSYCWLLETFLEAM- 296
Query: 231 PNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKNV 271
PK ++T+ D +M KA++ +P + LC +H+ +N+
Sbjct: 297 -RQVHPKSLITDGDLAMAKAISKVMPGAYHRLCTWHIEENM 336
>ref|NP_915530.1| P0529E05.9 [Oryza sativa (japonica cultivar-group)]
Length = 773
Score = 92.4 bits (228), Expect = 1e-17
Identities = 68/276 (24%), Positives = 123/276 (43%), Gaps = 11/276 (3%)
Query: 3 ELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRENNAWKLTILNGVHNHEMVRY 62
+ VC R G +K + + GC+ ++ + + + + HNHE++
Sbjct: 195 KFVCSREGFNKRNTSDACQRKRADTRVGCMAEMT-IKITPTGKYAIASFSNTHNHELITP 253
Query: 63 VAGHLLAG--RLMEDDKKIVHDLTDSLVKPKNILTNLKKKR--KESITNIKQVYNERHKF 118
HLL R+ E K + L DS V+ K + ++ ++S+T ++ Y +
Sbjct: 254 SKAHLLRSQRRMTEAQKAQIDILNDSGVRSKEGHEVMSRQAGGRQSLTFTRKDYKNYLRS 313
Query: 119 KKTK---RGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSVKLFNTFPTV 174
K+ K GD +QYL K EN Y + E + + +IFW SV F+ F V
Sbjct: 314 KRMKSIQEGDTGAILQYLQDKQMENPSFFYAIQVDEDEMMTNIFWADARSVLDFDYFGDV 373
Query: 175 LIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLEPNSD 234
+ D+TY+TN Y P VGV T + + E F W + + + +
Sbjct: 374 ICFDTTYRTNNYGRPFALFVGVNHHKQTVVFGAALLYDETTSTFEWLFETFKRAM--SGK 431
Query: 235 MPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKN 270
P+ ++T++ +++ A+ P+S+ LC +H+ +N
Sbjct: 432 EPRTILTDQCAAIINAIGTVFPNSTHRLCVWHMYQN 467
>ref|XP_482508.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)] gi|25553698|dbj|BAC24942.1| putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 1148
Score = 91.3 bits (225), Expect = 3e-17
Identities = 64/289 (22%), Positives = 126/289 (43%), Gaps = 39/289 (13%)
Query: 6 CERSGEHKLPKTKVKHEAT----------ESRKCGCLFKVRGYVVRENNAWKLTILNGVH 55
C R G+ V E T ++ C C + N W ++ + H
Sbjct: 413 CNRQGKPTSQSKSVSAEETVVSERNTNENDATDCKCALVIS----ERNEIWNISRVQLDH 468
Query: 56 NHEM-----VRYVAGHLLAGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKR--------- 101
NH++ VR++ H + ++K ++ L + + ++++ L R
Sbjct: 469 NHQLSPRDEVRFLKSHK---HMTTEEKMLIRTLKECNIPTRHMIVILSVLRGGLTSLPYT 525
Query: 102 KESITNIKQVYNERHKFKKTKRGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWT 160
K+ I+N++ N K+T D+ + +++ K E++ + Y + ES+ V+++FWT
Sbjct: 526 KKDISNVRTTIN-----KETSSNDIMKTLEFFRRKKEKDPHFFYEFDLDESKKVKNLFWT 580
Query: 161 HPTSVKLFNTFPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTW 220
S + + + V+ D+TY TN Y +P VG+ T +F+ E + F W
Sbjct: 581 DGRSREWYEKYGDVVSFDTTYFTNKYNLPFAPFVGIYGHGNTIVFGCAFLHDETSETFKW 640
Query: 221 ALQMLLKLLEPNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGK 269
+ LK + PK ++T++D +M A+ ++ C+FH+ K
Sbjct: 641 LFRTFLKAMSQKE--PKTIITDQDGAMRSAIAQVFQNAKHRNCFFHIVK 687
>gb|AAW41060.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21] gi|58258933|ref|XP_566879.1| conserved
hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 678
Score = 89.0 bits (219), Expect = 1e-16
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 116 HKFKKTKRGDL----TEMQYLISKLEENGYVH--YVREKPESQTVQDIFWTHPTSVKLFN 169
H+ +R DL + I +L N +H +V + E + + +T T+ L +
Sbjct: 8 HRLAFRRRADLRAGSSASAACIRQLVSNDELHRPFVNTRDE---LIGLVYTKRTARALIH 64
Query: 170 TFPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLL 229
FP VL D TYKTNLYRMP+ IVG TST +TY+ M E + +T AL +L+
Sbjct: 65 RFPEVLFFDCTYKTNLYRMPMLHIVGSTSTGMTYTAGVILMLRETTNWYTQALNSFFELV 124
Query: 230 EPNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKNV 271
KVV+T+RDP+++ A+ + LP + C++H+ +NV
Sbjct: 125 --GKPDVKVVITDRDPALINALMSVLPKAYRFSCFWHLQENV 164
>ref|NP_908529.1| P0702D12.15 [Oryza sativa (japonica cultivar-group)]
Length = 832
Score = 89.0 bits (219), Expect = 1e-16
Identities = 69/277 (24%), Positives = 123/277 (43%), Gaps = 17/277 (6%)
Query: 1 MLELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRENNAWKLTILNGVHNHEMV 60
M ++ C G + PKTK S + GC ++ R + W +T + HNH M
Sbjct: 113 MRQICCSHQGRN--PKTK-----KPSVRIGCPAMMKINRSRAGSGWSVTKVVSAHNHPMK 165
Query: 61 RYVA---GHLLAGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRK-ESITNIKQVYNERH 116
+ V + ++ E + I+ ++ DS + N+ L S+ + +R
Sbjct: 166 KSVGVTKNYQSHNQIDEGTRGIIEEMVDSSMSLTNMYGMLSGMHGGPSMVPFTRKAMDRL 225
Query: 117 KFKKTKRGDLTEMQYLISKLEE----NGYVHYVREKPESQTVQDIFWTHPTSVKLFNTFP 172
+ + +MQ + L++ + Y + E+ V++IFW+H S F F
Sbjct: 226 AYAIRRDESSDDMQKTLDVLKDLQKRSKNFFYSIQVDEACRVKNIFWSHAVSRLNFEHFG 285
Query: 173 TVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLEPN 232
V+ D+TYKTN Y MP VGV + + + + + E E++FTW + + N
Sbjct: 286 DVITFDTTYKTNKYNMPFAPFVGVNNHFQSTFFGCALLREETEESFTWLFNTFKECM--N 343
Query: 233 SDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGK 269
+P ++T+ PSM A+ P++ +C +HV K
Sbjct: 344 GKVPIGILTDNCPSMAAAIRTVFPNTIHRVCKWHVLK 380
>gb|AAU10761.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 822
Score = 87.8 bits (216), Expect = 3e-16
Identities = 68/277 (24%), Positives = 123/277 (43%), Gaps = 17/277 (6%)
Query: 1 MLELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRENNAWKLTILNGVHNHEMV 60
M ++ C G + PKTK S + GC ++ + + W +T + HNH M
Sbjct: 166 MRQICCSHQGRN--PKTK-----KPSVRIGCPAMMKINMSGAGSGWSVTKVVSAHNHPMK 218
Query: 61 RYVA---GHLLAGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRK-ESITNIKQVYNERH 116
+ V + ++ E + I+ ++ DS + N+ L S+ + +R
Sbjct: 219 KSVGVTKNYQSHNQIDEGTRGIIEEMVDSSMSLTNMYGMLSGMHGGPSMVPFTRKAMDRV 278
Query: 117 KFKKTKRGDLTEMQYLISKLEE----NGYVHYVREKPESQTVQDIFWTHPTSVKLFNTFP 172
+ + +MQ + L++ + Y + E+ V++IFW+H S F F
Sbjct: 279 AYAIRRDESSDDMQKTLDVLKDLQKRSKNFFYSIQVDEACRVKNIFWSHAVSRLNFEHFG 338
Query: 173 TVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLEPN 232
V+ D+TYKTN Y MP VGV + + + + + E E++FTW + + N
Sbjct: 339 DVITFDTTYKTNKYNMPFAPFVGVNNHFQSTFFGCALLREETEESFTWLFNTFKECM--N 396
Query: 233 SDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGK 269
+P ++T+ PSM A+ P++ +C +HV K
Sbjct: 397 GKVPIGILTDNCPSMAAAIRTVFPNTIHRVCKWHVLK 433
>ref|XP_481410.1| far-red impaired response protein -like [Oryza sativa (japonica
cultivar-group)] gi|35215248|dbj|BAC92598.1| putative
far-red impaired response protein [Oryza sativa
(japonica cultivar-group)] gi|35215057|dbj|BAC92415.1|
putative far-red impaired response protein [Oryza sativa
(japonica cultivar-group)]
Length = 1132
Score = 86.7 bits (213), Expect = 6e-16
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 29/285 (10%)
Query: 7 ERSGEHKLPKTKVKHEATESRK---------CGCLFKVRGYVVRENNAWKLTILNGVHNH 57
E E ++ + + EATE + C C+ V + W++ L+ HNH
Sbjct: 448 EEEEEEEVEEEEQIEEATEQERQTNVLKKTGCKCMMMVEKMFAL-GDVWQIATLDLKHNH 506
Query: 58 EMV-RYVAGHLLAGRLME-DDKKIVHDLTDSLVKPKNILTNLKKKR---------KESIT 106
+ R A L + + M +K+++ L + + ++++ L R K+ ++
Sbjct: 507 ALCPRREAKFLKSHKNMTIKEKRLIRTLKECNIPTRSMIVILSFLRGGLPALPYTKKDVS 566
Query: 107 NIKQVYNERHKFKKTKRGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSV 165
N+ N +T+ D+ + + YL K E+ + Y + E+ V +FWT S
Sbjct: 567 NVGTAINS-----ETRNNDMKQVLAYLRKKEIEDPGISYKFKLDENNKVTSMFWTDGRST 621
Query: 166 KLFNTFPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQML 225
+L+ + + D+TY+TN Y MP VGV T +F+ E + F W +
Sbjct: 622 QLYEEYGDCISFDTTYRTNRYNMPFAPFVGVIGHGTTCLFGCAFLGDETAETFKWVFETF 681
Query: 226 LKLLEPNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKN 270
+ PK ++T++D +M A+ ++ C FH+ KN
Sbjct: 682 ATAM--GGKHPKTIITDQDNAMRSAIAQVFQNTKHRNCLFHIKKN 724
>dbj|BAD81770.1| putative far-red impaired response protein [Oryza sativa (japonica
cultivar-group)]
Length = 883
Score = 86.7 bits (213), Expect = 6e-16
Identities = 68/277 (24%), Positives = 122/277 (43%), Gaps = 17/277 (6%)
Query: 1 MLELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRENNAWKLTILNGVHNHEMV 60
M ++ C G + PKTK S + GC ++ + + W +T + HNH M
Sbjct: 164 MRQICCSHQGRN--PKTK-----KPSVRIGCPAMMKINMSGAGSGWSVTKVVSAHNHPMK 216
Query: 61 RYVA---GHLLAGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRK-ESITNIKQVYNERH 116
+ V + ++ E + I+ ++ DS + N+ L S+ + +R
Sbjct: 217 KSVGVTKNYQSHNQIDEGTRGIIEEMVDSSMSLTNMYGMLSGMHGGPSMVPFTRKAMDRV 276
Query: 117 KFKKTKRGDLTEMQYLISKLEE----NGYVHYVREKPESQTVQDIFWTHPTSVKLFNTFP 172
+ + +MQ + L++ + Y + E+ V++IFW+H S F F
Sbjct: 277 AYAIRRDESSDDMQKTLDVLKDLQKRSKNFFYSIQVDEACRVKNIFWSHAVSRLNFEHFG 336
Query: 173 TVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLEPN 232
V+ D+TYKTN Y MP VGV + + + + + E E++FTW + + N
Sbjct: 337 DVITFDTTYKTNKYNMPFAPFVGVNNHFQSTFFGCALLREETEESFTWLFNTFKECM--N 394
Query: 233 SDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGK 269
+P ++T+ PSM A+ P++ +C HV K
Sbjct: 395 GKVPIGILTDNCPSMAAAIRTVFPNTIHRVCKSHVLK 431
>gb|AAQ56575.1| putative transposase [Oryza sativa (japonica cultivar-group)]
Length = 1037
Score = 86.7 bits (213), Expect = 6e-16
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 29/285 (10%)
Query: 7 ERSGEHKLPKTKVKHEATESRK---------CGCLFKVRGYVVRENNAWKLTILNGVHNH 57
E E ++ + + EATE + C C+ V + W++ L+ HNH
Sbjct: 353 EEEEEEEVEEEEQIEEATEQERQTNVLKKTGCKCMMMVEKMFAL-GDVWQIATLDLKHNH 411
Query: 58 EMV-RYVAGHLLAGRLME-DDKKIVHDLTDSLVKPKNILTNLKKKR---------KESIT 106
+ R A L + + M +K+++ L + + ++++ L R K+ ++
Sbjct: 412 ALCPRREAKFLKSHKNMTIKEKRLIRTLKECNIPTRSMIVILSFLRGGLPALPYTKKDVS 471
Query: 107 NIKQVYNERHKFKKTKRGDLTE-MQYLISKLEENGYVHYVREKPESQTVQDIFWTHPTSV 165
N+ N +T+ D+ + + YL K E+ + Y + E+ V +FWT S
Sbjct: 472 NVGTAINS-----ETRNNDMKQVLAYLRKKEIEDPGISYKFKLDENNKVTSMFWTDGRST 526
Query: 166 KLFNTFPTVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQML 225
+L+ + + D+TY+TN Y MP VGV T +F+ E + F W +
Sbjct: 527 QLYEEYGDCISFDTTYRTNRYNMPFAPFVGVIGHGTTCLFGCAFLGDETAETFKWVFETF 586
Query: 226 LKLLEPNSDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGKN 270
+ PK ++T++D +M A+ ++ C FH+ KN
Sbjct: 587 ATAM--GGKHPKTIITDQDNAMRSAIAQVFQNTKHRNCLFHIKKN 629
>emb|CAE02218.2| OSJNBb0002N06.8 [Oryza sativa (japonica cultivar-group)]
gi|50923349|ref|XP_472035.1| OSJNBb0002N06.8 [Oryza
sativa (japonica cultivar-group)]
Length = 885
Score = 86.3 bits (212), Expect = 8e-16
Identities = 68/277 (24%), Positives = 122/277 (43%), Gaps = 17/277 (6%)
Query: 1 MLELVCERSGEHKLPKTKVKHEATESRKCGCLFKVRGYVVRENNAWKLTILNGVHNHEMV 60
M ++ C G + PKTK S + GC ++ + W +T + HNH M
Sbjct: 166 MRQICCSHQGRN--PKTK-----KPSVRIGCPAMMKINRSGAGSGWSVTKVVSTHNHPMK 218
Query: 61 RYVA---GHLLAGRLMEDDKKIVHDLTDSLVKPKNILTNLKKKRK-ESITNIKQVYNERH 116
+ V + ++ E + I+ ++ DS + N+ L S+ + +R
Sbjct: 219 KSVGVTKNYQSHNQIDEGTRGIIEEMVDSSMSLTNMYGMLSGMHGGPSMVPFTRKAMDRL 278
Query: 117 KFKKTKRGDLTEMQYLISKLEE----NGYVHYVREKPESQTVQDIFWTHPTSVKLFNTFP 172
+ + +MQ + L++ + Y + E+ V++IFW+H S F F
Sbjct: 279 AYAIRRDESSDDMQKTLDVLKDLQKRSKNFFYSIQVDEACRVKNIFWSHAVSRLNFEHFG 338
Query: 173 TVLIMDSTYKTNLYRMPLFEIVGVTSTYLTYSVDFSFMTAEKEDNFTWALQMLLKLLEPN 232
V+ D+TYKTN Y MP VGV + + + + + E E++FTW + + N
Sbjct: 339 DVITFDTTYKTNKYNMPFAPFVGVNNHFQSTFFGCALLREETEESFTWLFNTFKECM--N 396
Query: 233 SDMPKVVVTNRDPSMMKAVTNALPDSSAILCYFHVGK 269
+P ++T+ PSM A+ P++ +C +HV K
Sbjct: 397 GKVPIGILTDNCPSMAAAIRTVFPNTIHRVCKWHVLK 433
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 443,492,283
Number of Sequences: 2540612
Number of extensions: 17354319
Number of successful extensions: 56064
Number of sequences better than 10.0: 370
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 184
Number of HSP's that attempted gapping in prelim test: 55691
Number of HSP's gapped (non-prelim): 428
length of query: 271
length of database: 863,360,394
effective HSP length: 126
effective length of query: 145
effective length of database: 543,243,282
effective search space: 78770275890
effective search space used: 78770275890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)
Medicago: description of AC135319.8