BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135230.3 + phase: 0 /pseudo
(605 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB75787.1| putative protein [Arabidopsis thaliana] gi|15231... 483 e-135
ref|XP_470649.1| Hypothetical protein [Oryza sativa (japonica cu... 446 e-123
ref|NP_915242.1| P0703B11.15 [Oryza sativa (japonica cultivar-gr... 212 3e-53
gb|AAP55032.1| hypothetical protein [Oryza sativa (japonica cult... 208 5e-52
gb|AAP54021.1| contains similarity to ribosomal protein [Oryza s... 207 8e-52
gb|AAV44104.1| hypothetical protein [Oryza sativa (japonica cult... 201 4e-50
ref|NP_918048.1| B1074C08.24 [Oryza sativa (japonica cultivar-gr... 199 3e-49
emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa (japonica cultiva... 195 3e-48
ref|NP_671823.1| expressed protein [Arabidopsis thaliana] 194 7e-48
ref|XP_470831.1| hypothetical protein [Oryza sativa (japonica cu... 192 3e-47
gb|AAX96400.1| transposon protein, putative, ping/pong/SNOOPY su... 191 8e-47
gb|AAL79730.1| putative ribosomal protein [Oryza sativa] 187 6e-46
gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY su... 184 7e-45
emb|CAE76535.1| conserved hypothetical protein [Neurospora crassa] 184 7e-45
gi|27575887 TPA: putative transposase [Oryza sativa (japonica cu... 184 7e-45
ref|XP_330609.1| hypothetical protein [Neurospora crassa] gi|289... 184 7e-45
ref|XP_475696.1| hypothetical protein [Oryza sativa (japonica cu... 181 5e-44
gi|27575890 TPA: putative transposase [Oryza sativa (japonica cu... 181 5e-44
gb|AAX96772.1| transposon protein, putative, ping/pong/SNOOPY su... 181 6e-44
gb|AAX96665.1| transposon protein, putative, ping/pong/SNOOPY su... 181 6e-44
>emb|CAB75787.1| putative protein [Arabidopsis thaliana]
gi|15231226|ref|NP_190160.1| hydrolase family protein /
HAD-superfamily protein [Arabidopsis thaliana]
gi|11282374|pir||T47514 hypothetical protein T6D9.70 -
Arabidopsis thaliana
Length = 376
Score = 483 bits (1243), Expect = e-135
Identities = 242/343 (70%), Positives = 282/343 (81%), Gaps = 10/343 (2%)
Query: 262 RPSFGIAFDIDGVILLGNTPVGGSPAALRKLYNYDGTLKFPYVFLTNGGGIPEAKRASEL 321
R SFGIAFDIDGVILLG++PVGGSP+ALR+LY+ G LK P++FLTNGGG+PE+KRASE+
Sbjct: 36 RSSFGIAFDIDGVILLGSSPVGGSPSALRRLYDDSGALKIPFLFLTNGGGLPESKRASEM 95
Query: 322 SELLGLNVSASQVLQGHSPFRQLVNRFEDKLIVAAGKGEPALVMSEYGFKNVISIDAYAS 381
S LLG+ VS QV+Q HSPFR+LVNRFE++L+VAAGKGEPA VMS YGFKNVIS+D YAS
Sbjct: 96 SHLLGVQVSPLQVIQAHSPFRKLVNRFENELVVAAGKGEPAAVMSNYGFKNVISMDEYAS 155
Query: 382 RFENIDPLAPYKKWTTKLATTQNPKFDESGPQIDVFSERVQAAFIVSDPVDWSRDVQVLC 441
F+NIDPLAPYKK + E + DV S+RVQAAFIVSDPVDWSRD+QVLC
Sbjct: 156 YFDNIDPLAPYKK-----LMFRQDGHKELRSREDVLSQRVQAAFIVSDPVDWSRDIQVLC 210
Query: 442 DILKTGGLPGRNVGTQPHLYFANDDLEYQTKFPSERLGMGAFRIALESIFNRTHHHSLEY 501
DIL+TGGLPG+ +G QPHLY ANDDL+YQT+FP+ERLGMGAFRIALESIFNR H LEY
Sbjct: 211 DILRTGGLPGKEIGPQPHLYIANDDLDYQTEFPTERLGMGAFRIALESIFNRIHEKPLEY 270
Query: 502 TCFGKPHPSVFKNAEIVLQKHVPRVDEDSYDINHKNAQPFQTLYMIGDNPAVDIRGARQT 561
T FGKP+P VFKNAE VL++ + Y N + + F+TLYMIGDNP +DIRGARQ
Sbjct: 271 TSFGKPNPFVFKNAEDVLKE----IATSPYSSN-QGSHHFKTLYMIGDNPKIDIRGARQA 325
Query: 562 GHPWFSILTRTGVFKGKENHDKFPADLVVDTVEEAVDYILAKE 604
G PWFSILTRTGVFKGK+NH +FPADLVVDTVEEAVD+IL +E
Sbjct: 326 GTPWFSILTRTGVFKGKDNHSEFPADLVVDTVEEAVDFILTRE 368
>ref|XP_470649.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|27476078|gb|AAO17009.1| Hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 389
Score = 446 bits (1146), Expect = e-123
Identities = 214/344 (62%), Positives = 263/344 (76%)
Query: 262 RPSFGIAFDIDGVILLGNTPVGGSPAALRKLYNYDGTLKFPYVFLTNGGGIPEAKRASEL 321
RPSFGIAFDIDGVIL G +P+GGSP A+R+LY+ DGTLK P++FLTNGGG+PE KRA EL
Sbjct: 44 RPSFGIAFDIDGVILRGRSPIGGSPQAIRRLYSEDGTLKIPFLFLTNGGGVPEHKRAQEL 103
Query: 322 SELLGLNVSASQVLQGHSPFRQLVNRFEDKLIVAAGKGEPALVMSEYGFKNVISIDAYAS 381
SELLG+N+S +QV+ G SP+++LVNRFE+ LI+A GKGEPA VM +YGF+ V+SID Y+S
Sbjct: 104 SELLGVNISPAQVVHGSSPYKELVNRFENDLIIAVGKGEPAAVMVDYGFRKVLSIDEYSS 163
Query: 382 RFENIDPLAPYKKWTTKLATTQNPKFDESGPQIDVFSERVQAAFIVSDPVDWSRDVQVLC 441
F +IDPLAP+KKW + N ++ P DVF ERV+ F+VSDPVDW RD+QVLC
Sbjct: 164 YFGDIDPLAPFKKWIVQQPDNINLMSEKVHPSYDVFEERVKGVFVVSDPVDWGRDLQVLC 223
Query: 442 DILKTGGLPGRNVGTQPHLYFANDDLEYQTKFPSERLGMGAFRIALESIFNRTHHHSLEY 501
DIL TGGLPG G QP LYFA+DDLEYQ FPSERLGMGAFRIALESIFN+ + H L+Y
Sbjct: 224 DILSTGGLPGSGRGDQPPLYFASDDLEYQAAFPSERLGMGAFRIALESIFNQVNDHRLKY 283
Query: 502 TCFGKPHPSVFKNAEIVLQKHVPRVDEDSYDINHKNAQPFQTLYMIGDNPAVDIRGARQT 561
+GKP+P VFKNA +L+K + S F T+YM+GDNP VDI GA +
Sbjct: 284 ISYGKPNPFVFKNAANILEKLAICMHPSSLPTKEVEEHRFSTIYMVGDNPKVDINGALKA 343
Query: 562 GHPWFSILTRTGVFKGKENHDKFPADLVVDTVEEAVDYILAKEC 605
G PW +LTRTGVF+GK+N ++PADLVVDTVE+A++ IL KEC
Sbjct: 344 GPPWSPVLTRTGVFRGKDNDPQYPADLVVDTVEDAINCILEKEC 387
>ref|NP_915242.1| P0703B11.15 [Oryza sativa (japonica cultivar-group)]
Length = 401
Score = 212 bits (539), Expect = 3e-53
Identities = 104/212 (49%), Positives = 140/212 (65%), Gaps = 10/212 (4%)
Query: 1 MDPFDIEAYFQKRDVEDTYIVNRFIQR-----RKKLEEGSASRT---RKYFNRDHVAANQ 52
+DP +I Y + + ++N F R + +LE G++ RT RKY NR+H A+
Sbjct: 9 IDPAEI--YTTDMFMAEHSVLNSFAGRIDKRIKARLEGGTSRRTSGPRKYINRNHEGAHD 66
Query: 53 RLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAK 112
+L DYFA +P Y A FRRR+RM++HVFL IV +L +YFT +VD + G SPL K
Sbjct: 67 QLFADYFAEDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRVDCTGRLGHSPLQK 126
Query: 113 CTTAMRMLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQ 172
CT A+RMLAYG AADA+DEY+K+ ST LECL F +G++ ++ YLR PT +D R+
Sbjct: 127 CTAAIRMLAYGTAADALDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPTAEDLERLL 186
Query: 173 HVSETRGFPWMIGSIDCMHWEWKNYPKAWEGK 204
V E+RGFP M+GSIDCMHW WKN P AW+G+
Sbjct: 187 QVGESRGFPGMLGSIDCMHWRWKNCPNAWKGQ 218
>gb|AAP55032.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37536886|ref|NP_922745.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|12597879|gb|AAG60187.1| hypothetical protein [Oryza
sativa]
Length = 513
Score = 208 bits (529), Expect = 5e-52
Identities = 103/212 (48%), Positives = 138/212 (64%), Gaps = 10/212 (4%)
Query: 1 MDPFDIEAYFQKRDVEDTYIVNRFIQR-----RKKLEEGSASRT---RKYFNRDHVAANQ 52
+DP +I Y + + ++N F R + +LE G++ RT RKY NR+H A+
Sbjct: 9 IDPAEI--YTTDMFMAEHSVLNSFAGRIDRRIKARLEGGTSRRTSGPRKYINRNHEGAHD 66
Query: 53 RLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAK 112
+L DYFA +P Y A FRRR+RM++HVFL IV +L +YFT +VD G SPL K
Sbjct: 67 QLFADYFAEDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRVDCTGCLGHSPLQK 126
Query: 113 CTTAMRMLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQ 172
CT A+RMLAYG AAD +DEY+K+ ST LECL F +G++ ++ YLR PT +D R+
Sbjct: 127 CTAAIRMLAYGTAADTLDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPTAEDLERLL 186
Query: 173 HVSETRGFPWMIGSIDCMHWEWKNYPKAWEGK 204
V E+RGFP M+GSIDCMHW WKN P AW+G+
Sbjct: 187 QVGESRGFPGMLGSIDCMHWRWKNCPTAWKGQ 218
>gb|AAP54021.1| contains similarity to ribosomal protein [Oryza sativa (japonica
cultivar-group)] gi|37534864|ref|NP_921734.1| contains
similarity to ribosomal protein [Oryza sativa (japonica
cultivar-group)]
Length = 308
Score = 207 bits (527), Expect = 8e-52
Identities = 99/206 (48%), Positives = 135/206 (65%), Gaps = 8/206 (3%)
Query: 7 EAYFQKRDVEDTYIVNRFIQR-----RKKLEEGSASRT---RKYFNRDHVAANQRLIDDY 58
E Y + + ++N F R + +LE G++ RT RKY NR+H A+ +L DY
Sbjct: 13 EVYTTDMFMAEHSVLNSFAGRIDKRIKARLEGGTSRRTSGPRKYINRNHEGAHDQLFADY 72
Query: 59 FANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTTAMR 118
FA +P Y A FRRR+RM++HVFL IV +L +YFT +++ + G SPL KCT A+R
Sbjct: 73 FAKDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRINCTGRLGHSPLQKCTAAIR 132
Query: 119 MLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVSETR 178
MLAYG AAD +DEY+K+ ST LECL F +G++ ++ YLR PT +D R+ V E+R
Sbjct: 133 MLAYGTAADTLDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPTAEDLERLLQVGESR 192
Query: 179 GFPWMIGSIDCMHWEWKNYPKAWEGK 204
GFP M+GSIDCMHW WKN P AW+G+
Sbjct: 193 GFPRMLGSIDCMHWRWKNCPTAWKGQ 218
>gb|AAV44104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|55167955|gb|AAV43824.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 444
Score = 201 bits (512), Expect = 4e-50
Identities = 102/209 (48%), Positives = 138/209 (65%), Gaps = 6/209 (2%)
Query: 1 MDPFDI-EAYFQKRDVEDTYIVNRFIQRRK-KLEEGSASR---TRKYFNRDHVAANQRLI 55
+DP + + Y +++V ++ +R I++ K + G R T K RDHV A+ RL+
Sbjct: 15 LDPSKVLDKYISEQNVLGSF-ASRIIEKMKGRFGAGRLKRQGGTIKTIRRDHVDAHSRLV 73
Query: 56 DDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTT 115
DYFA P Y + MFR R+RM K +FLRIV LS YFTQ+ D + +SPL KCT
Sbjct: 74 ADYFAEHPLYPERMFRTRFRMHKPLFLRIVEALSQWSPYFTQRGDCSGHTSLSPLQKCTA 133
Query: 116 AMRMLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVS 175
A+RMLAYG ADA+DEY+KIG ST LECL F +G+I ++ YLR PT++D I HV+
Sbjct: 134 ALRMLAYGTPADALDEYLKIGKSTALECLEMFSRGVIVVFGGTYLRRPTREDVEHILHVN 193
Query: 176 ETRGFPWMIGSIDCMHWEWKNYPKAWEGK 204
E+RGFP M+GSIDCMHW W++ P+AW G+
Sbjct: 194 ESRGFPGMLGSIDCMHWRWESCPRAWRGQ 222
>ref|NP_918048.1| B1074C08.24 [Oryza sativa (japonica cultivar-group)]
Length = 408
Score = 199 bits (505), Expect = 3e-49
Identities = 96/202 (47%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 6 IEAYFQKRDVEDTYIVNRFIQRRKKLEEGSASR---TRKYFNRDHVAANQRLIDDYFANE 62
I+ Y ++++ D++ + + KL G R TRK DH A+ LI DYF+ +
Sbjct: 15 IDQYIVEQNLIDSFARRVMEKIKTKLRIGKIRRKSVTRKTIKTDHTVAHHCLIADYFSED 74
Query: 63 PTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTTAMRMLAY 122
P Y ++MFR R+RM + +FLRIV L YFT +VD + ++G+SPL KCTT MRMLAY
Sbjct: 75 PLYPESMFRTRFRMGRPLFLRIVSALGRWSPYFTLKVDCSGRQGLSPLQKCTTTMRMLAY 134
Query: 123 GVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVSETRGFPW 182
G AD++DEY+KIG ST+L+CL F +G+I ++ YLR PT +D RI V+E+RGFP
Sbjct: 135 GSPADSLDEYLKIGKSTSLQCLDMFARGVIEVFGSEYLRRPTYEDVERILQVNESRGFPG 194
Query: 183 MIGSIDCMHWEWKNYPKAWEGK 204
M+GSIDCMHW W+ P AW G+
Sbjct: 195 MLGSIDCMHWRWEKCPTAWRGQ 216
>emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa (japonica cultivar-group)]
gi|50927987|ref|XP_473521.1| OSJNBa0017B10.12 [Oryza
sativa (japonica cultivar-group)]
Length = 454
Score = 195 bits (496), Expect = 3e-48
Identities = 96/194 (49%), Positives = 121/194 (61%)
Query: 17 DTYIVNRFIQRRKKLEEGSASRTRKYFNRDHVAANQRLIDDYFANEPTYDDAMFRRRYRM 76
+T I + KK + G ++ RKY R+ A RL YF P Y+D FR RYRM
Sbjct: 44 ETQIEEDISYQIKKQQRGPPTQQRKYIRRERQDAEDRLKAYYFLENPMYNDTQFRWRYRM 103
Query: 77 QKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTTAMRMLAYGVAADAVDEYIKIG 136
+KH+FL IV LS F Q+ DA K G SPL KCT A+RMLAYG +AD +DE ++I
Sbjct: 104 KKHLFLHIVQTLSHWSPVFQQRKDAFGKVGFSPLLKCTAALRMLAYGTSADILDENLQIA 163
Query: 137 SSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVSETRGFPWMIGSIDCMHWEWKN 196
+T +E L+ FCKGII + YLR PT +D R+ HV E RGFP M+GSIDCMHWEWKN
Sbjct: 164 ETTVIESLVNFCKGIIDCFGPKYLRRPTAEDIQRLLHVGEARGFPGMLGSIDCMHWEWKN 223
Query: 197 YPKAWEGKLAFANH 210
P AW+G+ +H
Sbjct: 224 CPVAWKGQYTRGDH 237
>ref|NP_671823.1| expressed protein [Arabidopsis thaliana]
Length = 270
Score = 194 bits (493), Expect = 7e-48
Identities = 107/207 (51%), Positives = 124/207 (59%), Gaps = 49/207 (23%)
Query: 3 PFDIEAYFQKRDVEDTYIVNRFIQRRKKLEEGSASRTRKYFNRDHVAANQRLIDDYFANE 62
PFDI+AY ++ ++E+ YI+NRF +RR K+ E DY
Sbjct: 7 PFDIKAYKRQSEIEEMYIINRFRERRNKIGE-----------------------DY---- 39
Query: 63 PTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTTAMRMLAY 122
P + LS+SDNYFTQ+ DAA K+GISPL K TT MRM AY
Sbjct: 40 PPH----------------------LSNSDNYFTQRYDAAKKEGISPLPKYTTTMRMFAY 77
Query: 123 GVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVSETRGFPW 182
GVAADAVDEY KIG +TTLECL RFCKGII+LYE YLRAPTQDD RI VSE RGFP
Sbjct: 78 GVAADAVDEYSKIGGTTTLECLRRFCKGIIKLYETEYLRAPTQDDLQRILRVSEMRGFPG 137
Query: 183 MIGSIDCMHWEWKNYPKAWEGKLAFAN 209
+IGSI+CM WEWK P WEG N
Sbjct: 138 IIGSINCMQWEWKTCPTVWEGNTTRVN 164
>ref|XP_470831.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|29824487|gb|AAP04202.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 626
Score = 192 bits (487), Expect = 3e-47
Identities = 88/168 (52%), Positives = 119/168 (70%)
Query: 37 SRTRKYFNRDHVAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFT 96
S TR+Y R+ A+N L+ +YF+ P Y D MFRRR+RM+K +FLRIV LS YFT
Sbjct: 238 SGTRRYIPRNREASNADLVANYFSESPIYTDKMFRRRFRMRKPLFLRIVSALSEWSPYFT 297
Query: 97 QQVDAANKKGISPLAKCTTAMRMLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYE 156
++DA + G SPL KCT A+RMLAYG AD +DE +KIG +T LECL +F +G+I ++
Sbjct: 298 NRLDATGRAGHSPLQKCTAAIRMLAYGTPADQLDEVLKIGPNTALECLGKFAEGVIEIFR 357
Query: 157 QVYLRAPTQDDPHRIQHVSETRGFPWMIGSIDCMHWEWKNYPKAWEGK 204
+ YLRAP D+ R+ V+++RGFP M+G+IDCMHW WKN P +W G+
Sbjct: 358 KEYLRAPRSDEVERLLQVADSRGFPGMLGNIDCMHWAWKNCPVSWCGQ 405
>gb|AAX96400.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 454
Score = 191 bits (484), Expect = 8e-47
Identities = 94/229 (41%), Positives = 136/229 (59%), Gaps = 7/229 (3%)
Query: 4 FDIEAYFQKRDVEDTYIVNRFIQRRKKLEEGSASRT------RKYFNRDHVAANQRLIDD 57
+ +E + ++ + D ++ ++ K+E AS + RKY R+ ++RL++D
Sbjct: 26 YSMEEFIAEQSIVDNFLQRIIVKIEAKIEAQKASTSHPRSGERKYVKRNREEGHRRLVED 85
Query: 58 YFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTTAM 117
YF+ +P Y D FR RYRM++ +FLRIV L YFT + DA N++G+SPL KCT A+
Sbjct: 86 YFSKDPIYSDKQFRARYRMRRPLFLRIVHALGEWSPYFTSRRDAINRQGLSPLQKCTIAI 145
Query: 118 RMLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVSET 177
R LA G DA+DEY+ G ST LECL F +G+I + + YLR+PT +D I ++E
Sbjct: 146 RALACGTLGDAIDEYVDTGISTALECLDWFVEGVIDNFGEEYLRSPTSEDMQHILQMNEA 205
Query: 178 RGFPWMIGSIDCMHWEWKNYPKAWEGKLAFANHVRARSRVASRITSRSS 226
RGFP M+GSI CMHWEWKN P W L +H A + + + S S
Sbjct: 206 RGFPGMLGSIGCMHWEWKNCPVIWRRHLTHTDH-GATTMILEAVASNDS 253
>gb|AAL79730.1| putative ribosomal protein [Oryza sativa]
Length = 915
Score = 187 bits (476), Expect = 6e-46
Identities = 91/177 (51%), Positives = 117/177 (65%), Gaps = 4/177 (2%)
Query: 27 RRKKLEEGSASRTRKYFNRDHVAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVG 86
RR++ + G R+Y R ++ L+ +YF+ P Y D FRRR+RM K +FLRIV
Sbjct: 519 RRRQRQSGP----RRYIPRPREKGHEDLVANYFSANPIYTDEQFRRRFRMNKPLFLRIVN 574
Query: 87 DLSSSDNYFTQQVDAANKKGISPLAKCTTAMRMLAYGVAADAVDEYIKIGSSTTLECLLR 146
LS+ D +FTQ+VDA + SPL KCT A+RML YG ADA+DE +KI +ST+LECL +
Sbjct: 575 ALSNWDQFFTQRVDATGRDSHSPLQKCTAAIRMLGYGTPADALDEVLKIAASTSLECLGK 634
Query: 147 FCKGIIRLYEQVYLRAPTQDDPHRIQHVSETRGFPWMIGSIDCMHWEWKNYPKAWEG 203
F GII + YLR PT D+ +I +E RGFP MIGSIDCMHW+WKN PK W G
Sbjct: 635 FAVGIIECFGSEYLRPPTSDELEKILQENEARGFPGMIGSIDCMHWQWKNCPKGWAG 691
>gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
gi|50252817|dbj|BAD29050.1| ribosomal protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 447
Score = 184 bits (467), Expect = 7e-45
Identities = 87/189 (46%), Positives = 119/189 (62%)
Query: 16 EDTYIVNRFIQRRKKLEEGSASRTRKYFNRDHVAANQRLIDDYFANEPTYDDAMFRRRYR 75
E T +V I+ + RK+ R A+Q+L++DYF+ P Y +FRRR+R
Sbjct: 32 EATVVVQSTIEGLQNEASDHRHHPRKHIKRPREEAHQQLVNDYFSENPLYPSKIFRRRFR 91
Query: 76 MQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTTAMRMLAYGVAADAVDEYIKI 135
M + +FLRIV L YFTQ+VDA N+KG+SPL KCT A+R LA G AD +DEY+KI
Sbjct: 92 MSRPLFLRIVEALGQWSVYFTQRVDAVNRKGLSPLQKCTAAIRQLATGSGADELDEYLKI 151
Query: 136 GSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVSETRGFPWMIGSIDCMHWEWK 195
G +T +E + F KG+ ++ + YLR PT +D R+ + E RGFP M GSIDCMHW W+
Sbjct: 152 GETTAMEAMKNFVKGLQDVFGERYLRRPTMEDTERLLQLGEKRGFPGMFGSIDCMHWHWE 211
Query: 196 NYPKAWEGK 204
P AW+G+
Sbjct: 212 RCPVAWKGQ 220
>emb|CAE76535.1| conserved hypothetical protein [Neurospora crassa]
Length = 458
Score = 184 bits (467), Expect = 7e-45
Identities = 127/375 (33%), Positives = 185/375 (48%), Gaps = 40/375 (10%)
Query: 263 PSFGIAFDIDGVILLGNTPVGGSPAALRKLYNYDGTLKFPYVFLTNGGGIPEAKRASELS 322
P F AFDIDGV+L TP+ G+P AL+ L + D P++ LTNGGG E +R +LS
Sbjct: 84 PPFAFAFDIDGVLLHVATPIPGAPEALKFLNDND----IPFILLTNGGGKHETERVKDLS 139
Query: 323 ELLGLNVSASQVLQGHSPFRQLVN-----RFEDKLIVAAGKGEPALVMSEYGFKNVISID 377
+ LG+ ++ +Q H+PFRQLV+ R + L+ A + L+ EYGF+NV++
Sbjct: 140 QKLGVELTTDNFVQSHTPFRQLVDGPDSLREKTILVTGANAEKCRLIAEEYGFRNVVTPA 199
Query: 378 AYASRFENIDPLAPY--KKWTTKLATTQNPKFDESGPQIDVFSERVQAAFIVSDPVDWSR 435
+ P P +T P F + ++ A F+ +DP DW+
Sbjct: 200 DILKAHPEVFPFDPLLDTVYTATARPLPRPIFTPGSGMRLSDALKIDAMFVFNDPRDWAY 259
Query: 436 DVQVLCDIL------------KTG--GLP--GRNVGTQPHLYFANDDLEYQTKFPSERLG 479
D+Q++ D+L K G LP G QP LYF+N DL + T F R G
Sbjct: 260 DIQLIVDLLLSQQGYVGTYSPKNGDAALPSCGWQQDGQPPLYFSNADLLWSTGFHLPRFG 319
Query: 480 MGAFRIALESIFNR-THHHSLEYTCFGKPHPSVFKNAEIVLQKHVPRVDEDSYDINHKNA 538
GAF+ A+ ++ R T+ H L+ GKP+ ++ AE VL H V H
Sbjct: 320 QGAFQAAVAGVWRRLTNGHELQRRVIGKPYSETYQFAERVLTTHRHEVLRRR---GHHEP 376
Query: 539 QPFQTLYMIGDNPAVDIRGAR----QTGHPWFSILTRTGVFKGKENHDK-----FPADLV 589
+++YM+GDNP DI GA + G W SIL RTGV+ + +K F ++
Sbjct: 377 GTLKSVYMVGDNPESDIAGANDFHSEAGTEWCSILVRTGVWSPEHAGEKALQGRFKPKVI 436
Query: 590 VDTVEEAVDYILAKE 604
VD EAV + L +E
Sbjct: 437 VDDAREAVRWALKRE 451
>gi|27575887 TPA: putative transposase [Oryza sativa (japonica cultivar-group)]
Length = 482
Score = 184 bits (467), Expect = 7e-45
Identities = 87/189 (46%), Positives = 119/189 (62%)
Query: 16 EDTYIVNRFIQRRKKLEEGSASRTRKYFNRDHVAANQRLIDDYFANEPTYDDAMFRRRYR 75
E T +V I+ + RK+ R A+Q+L++DYF+ P Y +FRRR+R
Sbjct: 67 EATVVVQSTIEGLQNEASDHRHHPRKHIKRPREEAHQQLVNDYFSENPLYPSKIFRRRFR 126
Query: 76 MQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTTAMRMLAYGVAADAVDEYIKI 135
M + +FLRIV L YFTQ+VDA N+KG+SPL KCT A+R LA G AD +DEY+KI
Sbjct: 127 MSRPLFLRIVEALGQWSVYFTQRVDAVNRKGLSPLQKCTAAIRQLATGSGADELDEYLKI 186
Query: 136 GSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVSETRGFPWMIGSIDCMHWEWK 195
G +T +E + F KG+ ++ + YLR PT +D R+ + E RGFP M GSIDCMHW W+
Sbjct: 187 GETTAMEAMKNFVKGLQDVFGERYLRRPTMEDTERLLQLGEKRGFPGMFGSIDCMHWHWE 246
Query: 196 NYPKAWEGK 204
P AW+G+
Sbjct: 247 RCPVAWKGQ 255
>ref|XP_330609.1| hypothetical protein [Neurospora crassa] gi|28926366|gb|EAA35343.1|
hypothetical protein [Neurospora crassa]
Length = 419
Score = 184 bits (467), Expect = 7e-45
Identities = 127/375 (33%), Positives = 185/375 (48%), Gaps = 40/375 (10%)
Query: 263 PSFGIAFDIDGVILLGNTPVGGSPAALRKLYNYDGTLKFPYVFLTNGGGIPEAKRASELS 322
P F AFDIDGV+L TP+ G+P AL+ L + D P++ LTNGGG E +R +LS
Sbjct: 45 PPFAFAFDIDGVLLHVATPIPGAPEALKFLNDND----IPFILLTNGGGKHETERVKDLS 100
Query: 323 ELLGLNVSASQVLQGHSPFRQLVN-----RFEDKLIVAAGKGEPALVMSEYGFKNVISID 377
+ LG+ ++ +Q H+PFRQLV+ R + L+ A + L+ EYGF+NV++
Sbjct: 101 QKLGVELTTDNFVQSHTPFRQLVDGPDSLREKTILVTGANAEKCRLIAEEYGFRNVVTPA 160
Query: 378 AYASRFENIDPLAPY--KKWTTKLATTQNPKFDESGPQIDVFSERVQAAFIVSDPVDWSR 435
+ P P +T P F + ++ A F+ +DP DW+
Sbjct: 161 DILKAHPEVFPFDPLLDTVYTATARPLPRPIFTPGSGMRLSDALKIDAMFVFNDPRDWAY 220
Query: 436 DVQVLCDIL------------KTG--GLP--GRNVGTQPHLYFANDDLEYQTKFPSERLG 479
D+Q++ D+L K G LP G QP LYF+N DL + T F R G
Sbjct: 221 DIQLIVDLLLSQQGYVGTYSPKNGDAALPSCGWQQDGQPPLYFSNADLLWSTGFHLPRFG 280
Query: 480 MGAFRIALESIFNR-THHHSLEYTCFGKPHPSVFKNAEIVLQKHVPRVDEDSYDINHKNA 538
GAF+ A+ ++ R T+ H L+ GKP+ ++ AE VL H V H
Sbjct: 281 QGAFQAAVAGVWRRLTNGHELQRRVIGKPYSETYQFAERVLTTHRHEVLRRR---GHHEP 337
Query: 539 QPFQTLYMIGDNPAVDIRGAR----QTGHPWFSILTRTGVFKGKENHDK-----FPADLV 589
+++YM+GDNP DI GA + G W SIL RTGV+ + +K F ++
Sbjct: 338 GTLKSVYMVGDNPESDIAGANDFHSEAGTEWCSILVRTGVWSPEHAGEKALQGRFKPKVI 397
Query: 590 VDTVEEAVDYILAKE 604
VD EAV + L +E
Sbjct: 398 VDDAREAVRWALKRE 412
>ref|XP_475696.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|48475076|gb|AAT44145.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 443
Score = 181 bits (460), Expect = 5e-44
Identities = 91/203 (44%), Positives = 119/203 (57%), Gaps = 9/203 (4%)
Query: 16 EDTYIVNRFIQRRKKLEEGSASRT---------RKYFNRDHVAANQRLIDDYFANEPTYD 66
ED I + K +G AS R+Y R+ + L+ +YF+ P Y
Sbjct: 26 EDEIIEELLAEEFKAAGDGEASSVSRRRRQSGPRRYIPRNRERGHDDLVANYFSANPIYT 85
Query: 67 DAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQVDAANKKGISPLAKCTTAMRMLAYGVAA 126
D MFRRR+RM++ +FLRIV +LS YFTQ+VDA + +SPL KC A+RML YG AA
Sbjct: 86 DEMFRRRFRMRRPLFLRIVHELSEWSPYFTQRVDATGRNSLSPLQKCIAAIRMLGYGTAA 145
Query: 127 DAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVYLRAPTQDDPHRIQHVSETRGFPWMIGS 186
D +DE ++I +ST LECL +F +G+I + YLR P D+ +I +E RGFP M GS
Sbjct: 146 DQLDEVLRIAASTCLECLGKFAEGVIEKFGDEYLRLPRADELEKILQENEARGFPGMYGS 205
Query: 187 IDCMHWEWKNYPKAWEGKLAFAN 209
IDCMHW WKN PK W G N
Sbjct: 206 IDCMHWPWKNCPKGWAGMFTSGN 228
>gi|27575890 TPA: putative transposase [Oryza sativa (japonica cultivar-group)]
gi|22830897|dbj|BAC15771.1| B [Oryza sativa (japonica
cultivar-group)]
Length = 455
Score = 181 bits (460), Expect = 5e-44
Identities = 82/165 (49%), Positives = 113/165 (67%)
Query: 40 RKYFNRDHVAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFTQQV 99
RK+ R A+Q L++DYF+ P Y +FRRR+RM + +FLRIV L +YFTQ+V
Sbjct: 57 RKHIKRPREEAHQNLVNDYFSENPLYPSNIFRRRFRMYRPLFLRIVDALGQWSDYFTQRV 116
Query: 100 DAANKKGISPLAKCTTAMRMLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYEQVY 159
DAA ++G+SPL KCT A+R LA G AD +DEY+KIG +T ++ + F KGI ++ + Y
Sbjct: 117 DAAGRQGLSPLQKCTAAIRQLATGSGADELDEYLKIGETTAMDAMKNFVKGIREVFGERY 176
Query: 160 LRAPTQDDPHRIQHVSETRGFPWMIGSIDCMHWEWKNYPKAWEGK 204
LR PT +D R+ + E RGFP M GSIDCMHW+W+ P AW+G+
Sbjct: 177 LRRPTVEDTERLLELGERRGFPGMFGSIDCMHWQWERCPTAWKGQ 221
>gb|AAX96772.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 403
Score = 181 bits (459), Expect = 6e-44
Identities = 83/166 (50%), Positives = 109/166 (65%)
Query: 37 SRTRKYFNRDHVAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFT 96
S R+Y +R + + L+ DYF P Y+D FRRR+RM+KH+FLRIV L D YFT
Sbjct: 64 SGPRRYVDRPYEESKHGLLKDYFVQNPVYNDTTFRRRFRMKKHLFLRIVEALGQWDKYFT 123
Query: 97 QQVDAANKKGISPLAKCTTAMRMLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYE 156
++DA N+ G+SPL KCT+A+ L G AD +DEY+ IG STT+ECL F KG+I ++
Sbjct: 124 LRMDALNRPGLSPLKKCTSAICQLGNGSPADQLDEYLNIGDSTTVECLKMFVKGVIEVFG 183
Query: 157 QVYLRAPTQDDPHRIQHVSETRGFPWMIGSIDCMHWEWKNYPKAWE 202
YLR P D R+ + E RGFP M+GSIDCMHW W+ P AW+
Sbjct: 184 AEYLRRPMVQDVERLVQIGERRGFPGMLGSIDCMHWHWEKCPVAWK 229
>gb|AAX96665.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 408
Score = 181 bits (459), Expect = 6e-44
Identities = 83/166 (50%), Positives = 109/166 (65%)
Query: 37 SRTRKYFNRDHVAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSSSDNYFT 96
S R+Y +R + + L+ DYF P Y+D FRRR+RM+KH+FLRIV L D YFT
Sbjct: 64 SGPRRYVDRPYEESKHGLLKDYFVQNPVYNDTTFRRRFRMKKHLFLRIVEALGQWDKYFT 123
Query: 97 QQVDAANKKGISPLAKCTTAMRMLAYGVAADAVDEYIKIGSSTTLECLLRFCKGIIRLYE 156
++DA N+ G+SPL KCT+A+ L G AD +DEY+ IG STT+ECL F KG+I ++
Sbjct: 124 LRMDALNRPGLSPLKKCTSAICQLGNGSPADQLDEYLNIGDSTTVECLKMFVKGVIEVFG 183
Query: 157 QVYLRAPTQDDPHRIQHVSETRGFPWMIGSIDCMHWEWKNYPKAWE 202
YLR P D R+ + E RGFP M+GSIDCMHW W+ P AW+
Sbjct: 184 AEYLRRPMVQDVERLVQIGERRGFPGMLGSIDCMHWHWEKCPVAWK 229
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,037,646,022
Number of Sequences: 2540612
Number of extensions: 44773339
Number of successful extensions: 83690
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 83299
Number of HSP's gapped (non-prelim): 172
length of query: 605
length of database: 863,360,394
effective HSP length: 134
effective length of query: 471
effective length of database: 522,918,386
effective search space: 246294559806
effective search space used: 246294559806
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)
Medicago: description of AC135230.3