BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135160.3 - phase: 0
(239 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD21731.1| unknown protein [Arabidopsis thaliana] gi|1522799... 150 2e-35
dbj|BAD53711.1| hypothetical protein [Oryza sativa (japonica cul... 111 2e-23
ref|NP_913603.1| OSJNBa0010K01.19 [Oryza sativa (japonica cultiv... 65 1e-09
ref|XP_466577.1| hypothetical protein [Oryza sativa (japonica cu... 52 1e-05
gb|AAL38681.1| unknown protein [Arabidopsis thaliana] gi|5089725... 52 2e-05
gb|AAK43923.1| Unknown protein [Arabidopsis thaliana] gi|3068934... 48 2e-04
gb|AAB64331.1| unknown protein [Arabidopsis thaliana] gi|2540886... 48 3e-04
ref|NP_172078.2| expressed protein [Arabidopsis thaliana] gi|425... 47 3e-04
gb|AAO51838.1| similar to hypothetical protein [Schizosaccharomy... 40 0.056
ref|XP_643953.1| hypothetical protein DDB0217489 [Dictyostelium ... 40 0.056
ref|XP_655822.1| villin-related protein [Entamoeba histolytica H... 40 0.073
emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae] gi|1045265|emb|C... 38 0.21
emb|CAA97180.1| NSR1 [Saccharomyces cerevisiae] 38 0.21
emb|CAF99080.1| unnamed protein product [Tetraodon nigroviridis] 38 0.21
gb|EAA20512.1| subtilisin-like protease 2 [Plasmodium yoelii yoe... 38 0.21
ref|NP_758478.1| hypothetical protein LOC231214 [Mus musculus] g... 38 0.28
gb|AAL92253.1| similar to Dictyostelium discoideum (Slime mold).... 38 0.28
gb|AAA97927.1| hum-3 [Caenorhabditis elegans] 38 0.28
dbj|BAC36933.1| unnamed protein product [Mus musculus] 38 0.28
emb|CAB62314.1| hypothetical protein [Arabidopsis thaliana] gi|1... 37 0.36
>gb|AAD21731.1| unknown protein [Arabidopsis thaliana] gi|15227995|ref|NP_181804.1|
expressed protein [Arabidopsis thaliana]
gi|25370822|pir||H84857 hypothetical protein At2g42760
[imported] - Arabidopsis thaliana
Length = 267
Score = 150 bits (380), Expect = 2e-35
Identities = 114/271 (42%), Positives = 151/271 (55%), Gaps = 37/271 (13%)
Query: 1 MSAEQILTLLDSFWFETTI-------LTNKNPSK--VEEILPQ---DTNLLLVPTPNLDV 48
M+ E++L L + W E I L K+ K +EIL + + L P L
Sbjct: 1 MAGEELLKLFEQNWSERPIFKKDKENLNGKSREKRGEKEILEERREEEALKNFPVSFLVE 60
Query: 49 RFYSEQNLSIIGS---VFSDSP-----SPNSVL----TSSKLRTIPSEREFGEFSTGTSS 96
R S++ + S +FS S SP SVL T KL+TI S +E F+
Sbjct: 61 RAMSDETMMTTSSKTSLFSSSSDDLFLSPRSVLPVKPTPMKLQTILSGKEVNAFTIAERE 120
Query: 97 ENHHQKEDVAYTKKKQSQSYRRRRRKSRSLSELEFKELKGFMDLGFVFSEED-KDSKLVS 155
+KE+ KKK+S R RK +S+S+LE++ELKGFMDLGFVFSE+D KDS LVS
Sbjct: 121 RLLSEKEEQRKKKKKKSNV---RTRKGKSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVS 177
Query: 156 LIPGLQRLGRENDDA--EEGEDEEHKKIDENVLSDNKPYLSEAWDVFDQRERK---NPLV 210
++PGLQRL +++D EE E+EE KI N + +PYLSEAWD R+ K P +
Sbjct: 178 ILPGLQRLVKKDDGVTKEEEEEEEEDKIGGNRAA--RPYLSEAWDHCGGRKGKKQITPEI 235
Query: 211 NWRV--PDKGSEIDMKDNLKFWAHAVASIAR 239
WRV P SE+D+KDNL+ WAHAVAS R
Sbjct: 236 KWRVPAPAAASEVDLKDNLRLWAHAVASTIR 266
>dbj|BAD53711.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 283
Score = 111 bits (277), Expect = 2e-23
Identities = 60/143 (41%), Positives = 81/143 (55%), Gaps = 21/143 (14%)
Query: 117 RRRRRKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRENDDAEEGEDE 176
RRR+R+ RS+SELEF+E+KG DLGF FSE+D D++L S++PGL+R + DDA E
Sbjct: 142 RRRQRRGRSMSELEFEEVKGLQDLGFTFSEDDVDAELASIVPGLRRRRSDEDDAREAPAA 201
Query: 177 EHKKIDENVLSD------------------NKPYLSEAWDVFDQRERKNPLVNWRVP--D 216
+E S +PYLSEAWD ++ E + L NWR+P
Sbjct: 202 AAASAEEEAASSRRIGSAPAGTSSSFSSAPRRPYLSEAWD-DEEEEMRRMLRNWRIPPAG 260
Query: 217 KGSEIDMKDNLKFWAHAVASIAR 239
G D+K+ L+ WAH VAS R
Sbjct: 261 DGDGADLKEQLRLWAHTVASAVR 283
>ref|NP_913603.1| OSJNBa0010K01.19 [Oryza sativa (japonica cultivar-group)]
gi|13486874|dbj|BAB40104.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 383
Score = 65.5 bits (158), Expect = 1e-09
Identities = 44/130 (33%), Positives = 65/130 (49%), Gaps = 14/130 (10%)
Query: 121 RKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQ--------RLGRENDDAEE 172
+K +S S+LE E++GF DLGFVF +E+ L ++PGL+ +NDDA
Sbjct: 254 KKWKSSSDLESIEVQGFRDLGFVFDQEELRESLADVLPGLRGKPTPTGSGSASDNDDANT 313
Query: 173 GEDEEHKKIDENVLSDNKPYLSEAWDVFDQRERKNP---LVNWRVPDKGSEIDMKDNLKF 229
+ V + +PYLSEAW + ++P + + D S +MKD L+
Sbjct: 314 ATTATG---SDAVAAVRRPYLSEAWYHVRRPAPRSPAAAAMRLQQADARSAAEMKDQLRM 370
Query: 230 WAHAVASIAR 239
WA AVA R
Sbjct: 371 WAQAVACNVR 380
>ref|XP_466577.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|47848288|dbj|BAD22152.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 167
Score = 52.0 bits (123), Expect = 1e-05
Identities = 36/101 (35%), Positives = 54/101 (52%), Gaps = 21/101 (20%)
Query: 114 QSYRRRRRKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRENDDAEEG 173
+S RR RR+ RS+S LE K D GF FSE+D D++LVS++ GL+R + DDA +
Sbjct: 39 RSGRRWRRRRRSMS-LELK----LQDFGFTFSEDDVDAELVSIVSGLRRQRSDEDDARKA 93
Query: 174 ---------EDEEHKKI-------DENVLSDNKPYLSEAWD 198
E+ ++I + + +P+LSE WD
Sbjct: 94 PAFAVASAEEEAAGRRIGFAPTGASSSSSTLRRPHLSEVWD 134
>gb|AAL38681.1| unknown protein [Arabidopsis thaliana] gi|50897252|gb|AAT85765.1|
At2g31560 [Arabidopsis thaliana]
gi|42571003|ref|NP_973575.1| expressed protein
[Arabidopsis thaliana] gi|30684991|ref|NP_850169.1|
expressed protein [Arabidopsis thaliana]
Length = 202
Score = 51.6 bits (122), Expect = 2e-05
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 122 KSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRENDDAEEGEDEEHKKI 181
+++SL++ + +ELKG +DLGF FS D+ +L + +P L+ + + + + H K
Sbjct: 94 RAKSLTDDDLEELKGCLDLGFGFS-YDEIPELCNTLPALELCYSMSQKFLDDKQQNHHKS 152
Query: 182 DENVLSDNKPYLSEAWDVFDQRERKNPLVNWRVPDKGSE-IDMKDNLKFWAHAVASIAR 239
E S P + P+ NW++ G + D+K LK+WA VA R
Sbjct: 153 QEEDDSSPPPTTTA------------PIANWKISSPGDDPDDVKARLKYWAQTVACTVR 199
>gb|AAK43923.1| Unknown protein [Arabidopsis thaliana] gi|30689349|ref|NP_850394.1|
expressed protein [Arabidopsis thaliana]
Length = 189
Score = 48.1 bits (113), Expect = 2e-04
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 56 LSIIGSVFSDSPSPNSVLTSSKLRTIPSEREFGEFSTGTSSENHHQKEDVAYTKKKQS-- 113
LS S +D S + + TSS SE E E + G +K+ KKK +
Sbjct: 7 LSRCSSYEADVDSDSEISTSSFSSCSYSESEEEEINNGFGVVQS-KKQTKKLEKKKSNVL 65
Query: 114 -------QSYRRRRRKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRE 166
+ ++++SL++ + +ELKG +DLGF F+ E+ +L + +P L+
Sbjct: 66 LEGYVVDSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEE-IPELCNTLPALELCYSM 124
Query: 167 NDDAEEGEDEEHKKIDENVLSDNKPYLSEAWDVFDQRERKNPLVNWRVPDKG-SEIDMKD 225
+ + + H S + P + V D +P+ +W++ G + D+K
Sbjct: 125 SQKFIDQDHHHH--------SSSSP--EKKSSVLD--SPVSPIASWKISSPGDNPDDVKA 172
Query: 226 NLKFWAHAVASIAR 239
LKFWA AVA R
Sbjct: 173 RLKFWAQAVACTVR 186
>gb|AAB64331.1| unknown protein [Arabidopsis thaliana] gi|25408860|pir||H84864
hypothetical protein At2g43340 [imported] - Arabidopsis
thaliana
Length = 241
Score = 47.8 bits (112), Expect = 3e-04
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 56 LSIIGSVFSDSPSPNSVLTSSKLRTIPSEREFGEFSTGTSSENHHQKEDVAYTKKKQS-- 113
LS S +D S + + TSS SE E E + G +K+ KKK +
Sbjct: 7 LSRCSSYEADVDSDSEISTSSFSSCSYSESEEEEINNGFGVVQS-KKQTKKLEKKKSNVL 65
Query: 114 -------QSYRRRRRKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRE 166
+ ++++SL++ + +ELKG +DLGF F+ E+ +L + +P L+
Sbjct: 66 LEGYVVDSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEE-IPELCNTLPALELCYSM 124
Query: 167 NDDAEEGEDEEHKKIDENVLSDNKPYLSEAWDVFDQRERKNPLVNWRVPDKG-SEIDMKD 225
+ + + H S + P + V D +P+ +W++ G + D+K
Sbjct: 125 SQKFIDQDHHHH--------SSSSP--EKKSSVLD--SPVSPIASWKISSPGDNPDDVKA 172
Query: 226 NLKFWAHAVASIAR 239
LKFWA AVA R
Sbjct: 173 RLKFWAQAVACTMR 186
>ref|NP_172078.2| expressed protein [Arabidopsis thaliana]
gi|42571351|ref|NP_973766.1| expressed protein
[Arabidopsis thaliana] gi|6850316|gb|AAF29393.1|
Contains similarity to an unknown protein from
Arabidopsis thaliana gb|AC002335.2. ESTs gb|AI997584,
gb|AA712406 come from this gene gi|25406874|pir||E86193
hypothetical protein [imported] - Arabidopsis thaliana
Length = 189
Score = 47.4 bits (111), Expect = 3e-04
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 34/152 (22%)
Query: 88 GEFSTGTSSENHHQKEDVAYTKKKQSQSYRRRRRKSRSLSELEFKELKGFMDLGFVFSEE 147
G T +SS QK+D+ +S+SL++ + ++L+G +DLGF FS
Sbjct: 61 GYVETASSSSVDDQKDDLT---------------RSKSLTDDDLEDLRGCLDLGFGFS-Y 104
Query: 148 DKDSKLVSLIPGLQ---RLGRENDDAEEGEDEEHKKIDENVLSDNKPYLSEAWDVFDQRE 204
D+ +L + +P L+ + ++ D ++ + E +++ + P ++
Sbjct: 105 DEIPELCNTLPALELCYSMSQKFLDDKQNKSPETSSVED---CPSPPLVT---------- 151
Query: 205 RKNPLVNWRVPDKG-SEIDMKDNLKFWAHAVA 235
P+ NW++ G + D+K LK+WA AVA
Sbjct: 152 -ATPIANWKISSPGDNPDDVKARLKYWAQAVA 182
>gb|AAO51838.1| similar to hypothetical protein [Schizosaccharomyces pombe]
[Dictyostelium discoideum]
Length = 923
Score = 40.0 bits (92), Expect = 0.056
Identities = 37/116 (31%), Positives = 59/116 (49%), Gaps = 5/116 (4%)
Query: 84 EREFGEFSTGTSSENHHQKEDVAYTKKKQ--SQSYRRRRRKSRSLSELEFKELKGF-MDL 140
E E GE SSE K+ V K++ +S + SE E +E +G +
Sbjct: 448 EEESGEEEEEESSEEEQVKQPVKKPIKQEPKEESEEEESEEEEEESEEEEEESEGEESEE 507
Query: 141 GFVFSEEDKDS-KLVSLIPGLQRLGRENDDAEEGEDEEHKKIDENVLSDNKPYLSE 195
SEE+KD+ + V +P L++ E+++++E EDEE DE+ SD++ LSE
Sbjct: 508 EEEESEEEKDNGRKVFRVP-LRKPTTESEESDEDEDEEESDEDEDEESDSEENLSE 562
>ref|XP_643953.1| hypothetical protein DDB0217489 [Dictyostelium discoideum]
gi|60472346|gb|EAL70299.1| hypothetical protein
DDB0217489 [Dictyostelium discoideum]
Length = 938
Score = 40.0 bits (92), Expect = 0.056
Identities = 37/116 (31%), Positives = 59/116 (49%), Gaps = 5/116 (4%)
Query: 84 EREFGEFSTGTSSENHHQKEDVAYTKKKQ--SQSYRRRRRKSRSLSELEFKELKGF-MDL 140
E E GE SSE K+ V K++ +S + SE E +E +G +
Sbjct: 463 EEESGEEEEEESSEEEQVKQPVKKPIKQEPKEESEEEESEEEEEESEEEEEESEGEESEE 522
Query: 141 GFVFSEEDKDS-KLVSLIPGLQRLGRENDDAEEGEDEEHKKIDENVLSDNKPYLSE 195
SEE+KD+ + V +P L++ E+++++E EDEE DE+ SD++ LSE
Sbjct: 523 EEEESEEEKDNGRKVFRVP-LRKPTTESEESDEDEDEEESDEDEDEESDSEENLSE 577
>ref|XP_655822.1| villin-related protein [Entamoeba histolytica HM-1:IMSS]
gi|56472985|gb|EAL50436.1| villin-related protein
[Entamoeba histolytica HM-1:IMSS]
Length = 1657
Score = 39.7 bits (91), Expect = 0.073
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 97 ENHHQKEDVAYTKKKQSQSYRRRRRKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSL 156
E ++K+++ ++K+ + R+ ++ + ELE ++ K + EE+++ KL
Sbjct: 793 EEENKKKEIEENERKKKEEEERQLKEEQKKKELEEQQRKEEEERERKLEEEERERKLEEE 852
Query: 157 IPGLQRLGRENDDAEEGEDEEHKKIDENVL-----SDNKPYLSEAWDVFDQRERKNPLVN 211
I +R+ E +E E+E +K+ E L +NK + E + D++E K+ + N
Sbjct: 853 I---KRIEEEERKLQEEEEENERKLQEEELKIKQEEENKRKVVENKPLKDKKEWKDLVEN 909
Query: 212 WRV 214
V
Sbjct: 910 EEV 912
>emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae] gi|1045265|emb|CAA59817.1| NSR1
[Saccharomyces cerevisiae] gi|4058|emb|CAA40472.1|
nuclear localization sequence binding protein
[Saccharomyces cerevisiae] gi|6321599|ref|NP_011675.1|
Nucleolar protein that binds nuclear localization
sequences, required for pre-rRNA processing and ribosome
biogenesis; Nsr1p [Saccharomyces cerevisiae]
gi|128576|sp|P27476|NSR1_YEAST Nuclear localization
sequence binding protein (P67)
Length = 414
Score = 38.1 bits (87), Expect = 0.21
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 64 SDSPSPNSVLTSSKLRTIPSEREFGEFSTGTSSENHHQKEDVAYTKKKQSQSYRRRRRKS 123
S+S S +S + S+ T E + S+ SS + ++E+ TKK++S+ S
Sbjct: 64 SESSSSSSSDSESEAETKKEESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSSSDSSS 123
Query: 124 RSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRENDDAEEGEDEE 177
S S+ E ++ EE D K R+++DAEE EDEE
Sbjct: 124 SSSSDSESEK------------EESNDKK------------RKSEDAEEEEDEE 153
>emb|CAA97180.1| NSR1 [Saccharomyces cerevisiae]
Length = 188
Score = 38.1 bits (87), Expect = 0.21
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 64 SDSPSPNSVLTSSKLRTIPSEREFGEFSTGTSSENHHQKEDVAYTKKKQSQSYRRRRRKS 123
S+S S +S + S+ T E + S+ SS + ++E+ TKK++S+ S
Sbjct: 64 SESSSSSSSDSESEAETKKEESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSSSDSSS 123
Query: 124 RSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRENDDAEEGEDEE 177
S S+ E ++ EE D K R+++DAEE EDEE
Sbjct: 124 SSSSDSESEK------------EESNDKK------------RKSEDAEEEEDEE 153
>emb|CAF99080.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2099
Score = 38.1 bits (87), Expect = 0.21
Identities = 27/131 (20%), Positives = 57/131 (42%), Gaps = 2/131 (1%)
Query: 76 SKLRTIPSEREFGEFSTGTSSENHHQKEDVAYTKKKQSQSYRRRRRKSRSLSELEFKELK 135
SK + +E + E+ SS E+++ +++ R K + +K+ K
Sbjct: 928 SKPKEGSAESDDSEYEKSDSSAESGMSEELSESEETGKHRKTRAATKKDEEKQRSYKQKK 987
Query: 136 GFMDLGFVFSEEDKDSKLVSLIPGLQRLGRENDDAEEGEDEEHKKIDENVLSDNKPYLSE 195
+ V + K+ + LQ+ G E+D+ ++G+D + +K +L D+K +E
Sbjct: 988 KRRRIK-VQESSSSNEKVFEMFQTLQKSGEEDDEQQDGDDRKGRKKIRKILKDDK-LRTE 1045
Query: 196 AWDVFDQRERK 206
D + E +
Sbjct: 1046 TRDALKEEEER 1056
>gb|EAA20512.1| subtilisin-like protease 2 [Plasmodium yoelii yoelii]
Length = 1225
Score = 38.1 bits (87), Expect = 0.21
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 30/155 (19%)
Query: 100 HQKEDVAYTKKKQ----SQSYRRRR-------RKSRSLSELEFKELKG-FMDLGFVFSEE 147
H+K+D+A KK++ QS RR R S L +++F EL + ++G S++
Sbjct: 76 HKKKDIADKKKRRRYGNQQSIENRRIAEENERRLSNQLDDIQFIELSNKYPNIGKQNSQQ 135
Query: 148 DKDSKLVSLIPGLQRLG--RENDDAEEGEDEEHKKIDENVLSDNKPYLSEAWDVFDQ--- 202
+K +K+ + R ++D +EGEDE+ D++++ K L E D+ ++
Sbjct: 136 NKVNKINNQNGASNSNDNIRNDEDEDEGEDEDE---DDDLIEGRKDNLEED-DLVEKNGA 191
Query: 203 ---------RERKNPLVNWRVPDKGSEIDMKDNLK 228
+E KN +N ++ + ++ DN K
Sbjct: 192 NLKRGNMHGQEEKNKNINTTPGNENNSKNVNDNKK 226
>ref|NP_758478.1| hypothetical protein LOC231214 [Mus musculus]
gi|22766808|gb|AAH32290.1| 5730509K17Rik protein [Mus
musculus]
Length = 1633
Score = 37.7 bits (86), Expect = 0.28
Identities = 32/132 (24%), Positives = 57/132 (42%), Gaps = 3/132 (2%)
Query: 61 SVFSDSPSPNSVLTSSKLRTIPSEREFGEFSTGTSSENHHQKEDVAYTKKKQSQSYRRRR 120
++ D P+P S R +E EFG + + + + +Y++ K S R+ +
Sbjct: 118 ALLRDVPTPRPRRLRSPSREKETETEFGTEPSTEVQDTQKEDDTKSYSRIKFRDSVRKIK 177
Query: 121 RKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRENDDAEEG--EDEEH 178
K + E + + F F E ++S+ S + G +R E+ + EEG E
Sbjct: 178 SKPQLPPGFPSAE-EAYNFFTFNFDPEPEESEEKSPVKGGERAHHEDQEGEEGTQAQERA 236
Query: 179 KKIDENVLSDNK 190
KK +E L + K
Sbjct: 237 KKTEEEELLNGK 248
>gb|AAL92253.1| similar to Dictyostelium discoideum (Slime mold). Hypothetical 97.7
kDa protein gi|66820172|ref|XP_643724.1| hypothetical
protein DDB0167503 [Dictyostelium discoideum]
gi|60471896|gb|EAL69850.1| hypothetical protein
DDB0167503 [Dictyostelium discoideum]
Length = 595
Score = 37.7 bits (86), Expect = 0.28
Identities = 49/206 (23%), Positives = 86/206 (40%), Gaps = 37/206 (17%)
Query: 13 FWFETTILTNKN--PSKVEEILPQDTNLLLVPTPNLDVRFYSEQN----LSIIGSVFSDS 66
F + +T L N+N P V + + N L+P P + + N L I F
Sbjct: 233 FGYNSTSLINQNTIPPSVTHV---ELNEFLIPKPWIGFQSNPFPNSVTYLKINAYSFYQI 289
Query: 67 PSPNSVLT-------SSKLRTIPSEREFGEFSTGTSSENHHQKEDVAYTKKKQSQSYRR- 118
P P +V T S K T PS T ++SEN +Q+ ++ K ++ +
Sbjct: 290 PVPPNVKTLIYSGNFSFKNSTFPSSSS-SSIPTSSTSENINQESIFSFPKTLKTLTLSSD 348
Query: 119 -----RRRKSRSLSELEF-------------KELKGFMDLGFVFSEEDKDSKLVSLIPGL 160
+ S+++L F K +K F+ G F++ K +L S+ P
Sbjct: 349 FNQPLKNLLPNSITKLTFGGAFNCQLENSIPKSIK-FLKFGNSFNKIIKIGELTSISPSS 407
Query: 161 QRLGRENDDAEEGEDEEHKKIDENVL 186
++ EN+D E ++ + +I+E+ L
Sbjct: 408 NQINNENNDNEINDNNNNNEIEESNL 433
>gb|AAA97927.1| hum-3 [Caenorhabditis elegans]
Length = 846
Score = 37.7 bits (86), Expect = 0.28
Identities = 23/89 (25%), Positives = 44/89 (48%), Gaps = 8/89 (8%)
Query: 147 EDKDSKLVSLIPGLQRLGRENDDA-------EEGEDEEHKKIDENVLSDNKPYLSEAWDV 199
ED ++ S+I L +L END+ +E ED+E ++ +E + + + + W
Sbjct: 703 EDCVKRVDSIIADL-KLQLENDELAEVERARKEAEDKERREAEEKAAASRRKFCAAKWRK 761
Query: 200 FDQRERKNPLVNWRVPDKGSEIDMKDNLK 228
+R RK+ NWR + S + ++ +K
Sbjct: 762 NVRRPRKSTSCNWRCRSRSSPSEAEEEVK 790
>dbj|BAC36933.1| unnamed protein product [Mus musculus]
Length = 541
Score = 37.7 bits (86), Expect = 0.28
Identities = 32/132 (24%), Positives = 57/132 (42%), Gaps = 3/132 (2%)
Query: 61 SVFSDSPSPNSVLTSSKLRTIPSEREFGEFSTGTSSENHHQKEDVAYTKKKQSQSYRRRR 120
++ D P+P S R +E EFG + + + + +Y++ K S R+ +
Sbjct: 69 ALLRDVPTPRPRRLRSPSREKETETEFGTEPSTEVQDTQKEDDTKSYSRIKFRDSVRKIK 128
Query: 121 RKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIPGLQRLGRENDDAEEG--EDEEH 178
K + E + + F F E ++S+ S + G +R E+ + EEG E
Sbjct: 129 SKPQLPPGFPSAE-EAYNFFTFNFDPEPEESEEKSPVKGGERAHHEDQEGEEGTQAQERA 187
Query: 179 KKIDENVLSDNK 190
KK +E L + K
Sbjct: 188 KKTEEEELLNGK 199
>emb|CAB62314.1| hypothetical protein [Arabidopsis thaliana]
gi|15229729|ref|NP_190604.1| expressed protein
[Arabidopsis thaliana] gi|11357344|pir||T45581
hypothetical protein F11C1.190 - Arabidopsis thaliana
Length = 181
Score = 37.4 bits (85), Expect = 0.36
Identities = 20/53 (37%), Positives = 32/53 (59%), Gaps = 1/53 (1%)
Query: 110 KKQSQSYRRRRRKSRSLSELEFKELKGFMDLGFVF-SEEDKDSKLVSLIPGLQ 161
K+Q S R R+ +SL++ + ELK +LGF F S E+ D +L + +P L+
Sbjct: 57 KRQDISRHRHLRRGKSLTDEDLDELKASFELGFGFGSPENADPRLSNTLPALE 109
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.130 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,949,600
Number of Sequences: 2540612
Number of extensions: 18166739
Number of successful extensions: 62583
Number of sequences better than 10.0: 276
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 62313
Number of HSP's gapped (non-prelim): 446
length of query: 239
length of database: 863,360,394
effective HSP length: 124
effective length of query: 115
effective length of database: 548,324,506
effective search space: 63057318190
effective search space used: 63057318190
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 73 (32.7 bits)
Medicago: description of AC135160.3