BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135160.2 + phase: 0 /pseudo
(319 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM62780.1| unknown [Arabidopsis thaliana] gi|20453337|gb|AAM... 373 e-102
pir||G84857 hypothetical protein At2g42750 [imported] - Arabidop... 350 3e-95
dbj|BAD87004.1| unknown protein [Oryza sativa (japonica cultivar... 350 4e-95
ref|NP_916772.1| P0435H01.21 [Oryza sativa (japonica cultivar-gr... 340 2e-92
gb|AAU43972.1| unknown protein [Oryza sativa (japonica cultivar-... 322 9e-87
gb|AAS72346.1| unknown protein [Oryza sativa (japonica cultivar-... 244 3e-63
dbj|BAB11179.1| unnamed protein product [Arabidopsis thaliana] g... 121 3e-26
ref|XP_474332.1| OSJNBa0018M05.19 [Oryza sativa (japonica cultiv... 100 6e-20
ref|YP_173052.1| 4Fe-4S ferredoxin [Synechococcus elongatus PCC ... 92 2e-17
ref|ZP_00517594.1| similar to Ferredoxin [Crocosphaera watsonii ... 92 3e-17
ref|NP_682930.1| hypothetical protein tlr2140 [Thermosynechococc... 89 2e-16
ref|ZP_00325218.1| COG1141: Ferredoxin [Trichodesmium erythraeum... 88 4e-16
ref|ZP_00111983.1| COG1141: Ferredoxin [Nostoc punctiforme PCC 7... 87 5e-16
dbj|BAB77569.1| alr0045 [Nostoc sp. PCC 7120] gi|17227541|ref|NP... 86 1e-15
ref|ZP_00162598.1| COG1141: Ferredoxin [Anabaena variabilis ATCC... 86 1e-15
ref|NP_442688.1| ferredoxin (bacterial type ferredoxin family) [... 86 2e-15
dbj|BAC42598.1| unknown protein [Arabidopsis thaliana] 85 2e-15
ref|NP_893594.1| hypothetical protein PMM1477 [Prochlorococcus m... 82 2e-14
ref|NP_925826.1| hypothetical protein gll2880 [Gloeobacter viola... 82 3e-14
gb|AAD26588.1| unknown [Synechococcus sp. PCC 7002] 78 4e-13
>gb|AAM62780.1| unknown [Arabidopsis thaliana] gi|20453337|gb|AAM19907.1|
At2g42750/F7D19.25 [Arabidopsis thaliana]
gi|20197961|gb|AAD21732.2| expressed protein
[Arabidopsis thaliana] gi|17978968|gb|AAL47445.1|
At2g42750/F7D19.25 [Arabidopsis thaliana]
gi|18406052|ref|NP_565982.1| DNAJ heat shock N-terminal
domain-containing protein [Arabidopsis thaliana]
Length = 344
Score = 373 bits (957), Expect = e-102
Identities = 204/344 (59%), Positives = 245/344 (70%), Gaps = 32/344 (9%)
Query: 1 MAQLLTPLYPEALKIHNSSLCTRSSWQ-MLQQKT--AVSPWRFATPSCKRR--GFGRVRV 55
MAQ+L+P+ + LK NS+L +RS KT A S W + KRR GR+RV
Sbjct: 1 MAQILSPVCTDLLKFQNSALSSRSGASPRFSAKTTGASSSWYLPRYAGKRRTDSIGRLRV 60
Query: 56 ATEQESFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCT 115
ATE S ++ V A+DYYAVLGLLPDAT E+IKKAYYNCMK+CHPDLSGNDPETTNFC
Sbjct: 61 ATEDASSLSTGDV-ADDYYAVLGLLPDATQEEIKKAYYNCMKSCHPDLSGNDPETTNFCM 119
Query: 116 FINEVYEVLSDPVQRRVYDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCIGCKNCANVAC 175
FIN++YE+LSDPVQR VYD+IHGY++T+INPF+DDS+P+DHVFVDEF+CIGCKNCANVA
Sbjct: 120 FINDIYEILSDPVQRMVYDEIHGYTVTAINPFLDDSTPRDHVFVDEFACIGCKNCANVAP 179
Query: 176 DVFGIEEDFGRARVYNQFGNPELIQTAIESCPVDCIHWTSAAQLSLLEDEMRRIERVNLY 235
D+F IEEDFGRAR NQ GNP+L+Q A+E+CPVDCIH TSAAQLSLLEDEMRR+ERVN+
Sbjct: 180 DIFQIEEDFGRARACNQRGNPDLVQQAVETCPVDCIHQTSAAQLSLLEDEMRRVERVNVA 239
Query: 236 F*KHKV*MGSALGDVFRM-----------TIITAGKYPMGEKTV------------KILD 272
MGS DVFRM + A M K K +
Sbjct: 240 LMLSG--MGSGAVDVFRMARSRWEKRQAKVLNQARSRMMKRKNTDETPSYWDNLWGKQNE 297
Query: 273 YENSEEEVKERAKRAAAAARKWREYSRKGGAVKPSTVKLPEATS 316
Y+ SEEEV+ERA+RAAAAAR+WREYSR+G +P T KLP++ S
Sbjct: 298 YQKSEEEVQERAQRAAAAARRWREYSRRGVDKRP-TFKLPDSAS 340
>pir||G84857 hypothetical protein At2g42750 [imported] - Arabidopsis thaliana
Length = 377
Score = 350 bits (898), Expect = 3e-95
Identities = 204/375 (54%), Positives = 245/375 (64%), Gaps = 61/375 (16%)
Query: 1 MAQLLTPLYPEALKIHNSSLCTRSSWQ-MLQQKT--AVSPWRFATPSCKRR--GFGRVRV 55
MAQ+L+P+ + LK NS+L +RS KT A S W + KRR GR+RV
Sbjct: 1 MAQILSPVCTDLLKFQNSALSSRSGASPRFSAKTTGASSSWYLPRYAGKRRTDSIGRLRV 60
Query: 56 ATEQESFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCT 115
ATE S ++ V A+DYYAVLGLLPDAT E+IKKAYYNCMK+CHPDLSGNDPETTNFC
Sbjct: 61 ATEDASSLSTGDV-ADDYYAVLGLLPDATQEEIKKAYYNCMKSCHPDLSGNDPETTNFCM 119
Query: 116 FINEVYEVLSDPVQRRVYDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCI---------- 165
FIN++YE+LSDPVQR VYD+IHGY++T+INPF+DDS+P+DHVFVDEF+CI
Sbjct: 120 FINDIYEILSDPVQRMVYDEIHGYTVTAINPFLDDSTPRDHVFVDEFACIEAACFDDLES 179
Query: 166 ---------GCKNCANVACDVFGIEEDFGRARVYNQFGNPELIQTAIESCPVDCIHWTSA 216
GCKNCANVA D+F IEEDFGRAR NQ GNP+L+Q A+E+CPVDCIH TSA
Sbjct: 180 DYICVWCLTGCKNCANVAPDIFQIEEDFGRARACNQRGNPDLVQQAVETCPVDCIHQTSA 239
Query: 217 AQLSLLEDEMRRIERVNL-------YF*KHKV*MGSALGDVFRM-----------TIITA 258
AQLSLLEDEMRR+ERVNL MGS DVFRM + A
Sbjct: 240 AQLSLLEDEMRRVERVNLLELSLIDQVALMLSGMGSGAVDVFRMARSRWEKRQAKVLNQA 299
Query: 259 GKYPMGEKTV------------KILDYENS-----EEEVKERAKRAAAAARKWREYSRKG 301
M K K +Y+ S +EEV+ERA+RAAAAAR+WREYSR+G
Sbjct: 300 RSRMMKRKNTDETPSYWDNLWGKQNEYQKSGKIDDKEEVQERAQRAAAAARRWREYSRRG 359
Query: 302 GAVKPSTVKLPEATS 316
+P T KLP++ S
Sbjct: 360 VDKRP-TFKLPDSAS 373
>dbj|BAD87004.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 342
Score = 350 bits (897), Expect = 4e-95
Identities = 202/354 (57%), Positives = 235/354 (66%), Gaps = 51/354 (14%)
Query: 1 MAQLLTP--LYPEALKIHNSSLCTRSSWQMLQQKTAVSPWRFATPSCKRRGFGRVRV--- 55
MA LL+P L K H SS T S + ++ A++ RFA +R R R
Sbjct: 1 MAPLLSPPLLADSVAKFHCSSTPTPCSGSV--RRWAIT--RFAGAGRRRDWHRRRRTSGR 56
Query: 56 ------ATEQESFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPE 109
A ES S+ V AEDYYAVLG++PDATP+QIKKAYYNCMK CHPDLSGNDP+
Sbjct: 57 GVLTVSAVAAESPSSGGGV-AEDYYAVLGVMPDATPQQIKKAYYNCMKACHPDLSGNDPD 115
Query: 110 TTNFCTFINEVYEVLSDPVQRRVYDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCIGCKN 169
TNFC FINEVY VL+DP+QR VYD+IHGY+ T+ NPF DDS+P+DHVFVDEFSCIGCKN
Sbjct: 116 VTNFCMFINEVYTVLTDPIQRAVYDEIHGYAATATNPFFDDSAPRDHVFVDEFSCIGCKN 175
Query: 170 CANVACDVFGIEEDFGRARVYNQFGNPELIQTAIESCPVDCIHWTSAAQLSLLEDEMRRI 229
CANV VF IEEDFGRARVYNQ GN ELIQ AI++CPVDCIHWTSAAQLSLLEDEMRR+
Sbjct: 176 CANVCSKVFEIEEDFGRARVYNQSGNAELIQEAIDTCPVDCIHWTSAAQLSLLEDEMRRV 235
Query: 230 ERVNLYF*KHKV*MGSALGDVFRMTIITAGKYPMGEKTVKILD----------------- 272
ERVN+ MGS++ DVFRM K + K+L+
Sbjct: 236 ERVNVGL--MLAGMGSSV-DVFRMASTRWEK-----RQAKVLEKVRRRVSQEDSGKGSSW 287
Query: 273 ---------YENSEEEVKERAKRAAAAARKWREYSRKGGAVKPSTVKLPEATSS 317
Y +E+E +ERAKRAAAAAR+WREYSRK GA KP T KLPEA S+
Sbjct: 288 SDVWGAPTRYRKNEDEARERAKRAAAAARRWREYSRK-GADKPPTFKLPEAVSN 340
>ref|NP_916772.1| P0435H01.21 [Oryza sativa (japonica cultivar-group)]
Length = 348
Score = 340 bits (873), Expect = 2e-92
Identities = 201/355 (56%), Positives = 234/355 (65%), Gaps = 47/355 (13%)
Query: 1 MAQLLTP--LYPEALKIHNSSLCTRSSWQMLQQKTAVSPWRFATPSCKRRGFGRVRV--- 55
MA LL+P L K H SS T S + ++ A++ RFA +R R R
Sbjct: 1 MAPLLSPPLLADSVAKFHCSSTPTPCSGSV--RRWAIT--RFAGAGRRRDWHRRRRTSGR 56
Query: 56 ------ATEQESFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPE 109
A ES S+ V AEDYYAVLG++PDATP+QIKKAYYNCMK CHPDLSGNDP+
Sbjct: 57 GVLTVSAVAAESPSSGGGV-AEDYYAVLGVMPDATPQQIKKAYYNCMKACHPDLSGNDPD 115
Query: 110 TTNFCTFINEVYEVLSDPVQRRVYDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCI---- 165
TNFC FINEVY VL+DP+QR VYD+IHGY+ T+ NPF DDS+P+DHVFVDEFSCI
Sbjct: 116 VTNFCMFINEVYTVLTDPIQRAVYDEIHGYAATATNPFFDDSAPRDHVFVDEFSCIGIIN 175
Query: 166 ---------------GCKNCANVACDVFGIEEDFGRARVYNQFGNPELIQTAIESCPVDC 210
GCKNCANV VF IEEDFGRARVYNQ GN ELIQ AI++CPVDC
Sbjct: 176 YYITKQEFILVYVLFGCKNCANVCSKVFEIEEDFGRARVYNQSGNAELIQEAIDTCPVDC 235
Query: 211 IHWTSAAQLSLLEDEMRRIERVNLYF*KHKV*MGSALGDVFRMTII-------TAGK-YP 262
IHWTSAAQLSLLEDEMRR+ERVN+ MGS++ DVFRM + +GK
Sbjct: 236 IHWTSAAQLSLLEDEMRRVERVNVGL--MLAGMGSSV-DVFRMEKVRRRVSQEDSGKGSS 292
Query: 263 MGEKTVKILDYENSEEEVKERAKRAAAAARKWREYSRKGGAVKPSTVKLPEATSS 317
+ Y +E+E +ERAKRAAAAAR+WREYSRK GA KP T KLPEA S+
Sbjct: 293 WSDVWGAPTRYRKNEDEARERAKRAAAAARRWREYSRK-GADKPPTFKLPEAVSN 346
>gb|AAU43972.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 344
Score = 322 bits (825), Expect = 9e-87
Identities = 175/296 (59%), Positives = 208/296 (70%), Gaps = 33/296 (11%)
Query: 47 RRGFGRVRVATEQESFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGN 106
RR A E E S D V A+D+Y+VLG++PDATPE+IKKAYY+CMK CHPDLSG+
Sbjct: 55 RRDLRSCAYAAEAEYGSAEDEV-ADDFYSVLGVMPDATPEEIKKAYYSCMKACHPDLSGD 113
Query: 107 DPETTNFCTFINEVYEVLSDPVQRRVYDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCIG 166
+PE TNFC FINEVY VLSDPVQR VYD+IHGY+ T+ NPF DDS+PKD VFVDEF+CIG
Sbjct: 114 NPEVTNFCMFINEVYTVLSDPVQRAVYDEIHGYTATATNPFFDDSAPKDQVFVDEFTCIG 173
Query: 167 CKNCANVACDVFGIEEDFGRARVYNQFGNPELIQTAIESCPVDCIHWTSAAQLSLLEDEM 226
CK CANV +VF IEED+GR+RVY+Q G+ ELIQ AI+SCPV+CIHWTSAAQLSLLE+EM
Sbjct: 174 CKYCANVCPNVFRIEEDYGRSRVYSQSGSTELIQEAIDSCPVNCIHWTSAAQLSLLENEM 233
Query: 227 RRIERVNLYF*KHKV*MGSALG---DVFRM-----------------TIITAGKY-PMGE 265
RRIERVN+ M + +G DVFR+ T +T KY +
Sbjct: 234 RRIERVNVGL------MSAGMGVSVDVFRLASVRWEKRQSKVLEKIRTRMTNKKYSDISS 287
Query: 266 KTVKI----LDYENSEEEVKERAKRAAAAARKWREYSRKGGAVKPSTVKLPEATSS 317
I Y+ +EEE ERAKRAAAAAR+WREYSRK GA +P KLPEA +
Sbjct: 288 SWTDIWGSPTRYQGNEEEGTERAKRAAAAARRWREYSRK-GADRPPEYKLPEAAGN 342
>gb|AAS72346.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 295
Score = 244 bits (622), Expect = 3e-63
Identities = 126/213 (59%), Positives = 149/213 (69%), Gaps = 30/213 (14%)
Query: 47 RRGFGRVRVATEQESFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGN 106
RR A E E S D V A+D+Y+VLG++PDATPE+IKKAYY+CMK CHPDLSG+
Sbjct: 55 RRDLRSCAYAAEAEYGSAEDEV-ADDFYSVLGVMPDATPEEIKKAYYSCMKACHPDLSGD 113
Query: 107 DPETTNFCTFINEVYEVLSDPVQRRVYDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCIG 166
+PE TNFC FINEVY VLSDPVQR VYD+IHGY+ T+ NPF DDS+PKD VFVDEF+CIG
Sbjct: 114 NPEVTNFCMFINEVYTVLSDPVQRAVYDEIHGYTATATNPFFDDSAPKDQVFVDEFTCIG 173
Query: 167 CKNCANVACDVFGIEEDFGRARVYNQFGNPELIQTAIESCPVDCIHWTSAAQLSLLEDEM 226
CK CANV +VF IEED+G PV+CIHWTSAAQLSLLE+EM
Sbjct: 174 CKYCANVCPNVFRIEEDYG--------------------SPVNCIHWTSAAQLSLLENEM 213
Query: 227 RRIERVNLYF*KHKV*MGSALG---DVFRMTII 256
RRIERVN+ M + +G DVFR+ +
Sbjct: 214 RRIERVNVGL------MSAGMGVSVDVFRLASV 240
>dbj|BAB11179.1| unnamed protein product [Arabidopsis thaliana]
gi|15237259|ref|NP_197715.1| DNAJ heat shock N-terminal
domain-containing protein [Arabidopsis thaliana]
Length = 465
Score = 121 bits (303), Expect = 3e-26
Identities = 86/265 (32%), Positives = 131/265 (48%), Gaps = 21/265 (7%)
Query: 63 STSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYE 122
S+S S+ D Y +LG+ + QIK AY K CHPD++G+ + +NE Y+
Sbjct: 41 SSSSSITDFDLYDLLGIDRSSDKSQIKSAYRALQKRCHPDIAGDPGH--DMAIILNEAYQ 98
Query: 123 VLSDPVQRRVYD-------DIHGYSLTSI-NPFMDDSSPKDHVFVDEFSCIGCKNCANVA 174
+LSDP+ R+ YD ++ GY+ I + + + + FVDE C+GC CA A
Sbjct: 99 LLSDPISRQAYDKEQAKLEELRGYTGKPIYSVWCGPETEQRAAFVDEVKCVGCLKCALCA 158
Query: 175 CDVFGIEEDFGRARVYNQFGNPE-LIQTAIESCPVDCIHWTSAAQLSLLEDEMRRIERVN 233
F IE +GRARV Q+ +PE I+ AIE+CPVDCI + L+ LE M + R N
Sbjct: 159 EKTFAIETAYGRARVVAQWADPESKIKEAIEACPVDCISMVERSDLAPLEFLMSKQPRGN 218
Query: 234 LYF*KHKV*MGSALGDVFRMTIITAGKY-PMGEKTVKILDYENSEEEVKERAKRAAAAAR 292
+ ++ +G+ +G+ + K+ K + E S+ EV+ A A +
Sbjct: 219 V-----RIGVGNTVGERVSNVFVDVKKFQERYAKAMSRTTKETSQREVQISAVEAIRSIS 273
Query: 293 KWREYSRKGGAVKPSTVKLPEATSS 317
W Y R KP + PE+ S
Sbjct: 274 NWL-YWRSSPYTKPLS---PESNMS 294
>ref|XP_474332.1| OSJNBa0018M05.19 [Oryza sativa (japonica cultivar-group)]
gi|38344928|emb|CAE03244.2| OSJNBa0018M05.19 [Oryza
sativa (japonica cultivar-group)]
Length = 486
Score = 100 bits (249), Expect = 6e-20
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 72 DYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRR 131
D Y +LG+ + +IK AY + K CHPD++G + + +NEVY +LSDP R
Sbjct: 65 DLYGLLGVERSSPQSEIKAAYRSLQKRCHPDVAG--AKGHDMAIVLNEVYSLLSDPAARL 122
Query: 132 VYD-------DIHGYSLTSI-NPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEED 183
YD + GY+ + + + + + VFVDE C+GC CA A F +E
Sbjct: 123 AYDQEQAKQSEFVGYTGKPLYSAWFGGEAEQRAVFVDEVRCVGCLKCALYANKTFAVESV 182
Query: 184 FGRARVYNQFGNPE-LIQTAIESCPVDCIHWTSAAQLSLLEDEMRRIER 231
+GRARV Q+ + E I AI++CPVDCI + L+ LE M + R
Sbjct: 183 YGRARVVAQWADAEDKILDAIQTCPVDCISMVERSDLAALEFLMSKQPR 231
>ref|YP_173052.1| 4Fe-4S ferredoxin [Synechococcus elongatus PCC 6301]
gi|56687310|dbj|BAD80532.1| 4Fe-4S ferredoxin
[Synechococcus elongatus PCC 6301]
gi|46130072|ref|ZP_00202216.1| COG1141: Ferredoxin
[Synechococcus elongatus PCC 7942]
Length = 130
Score = 92.4 bits (228), Expect = 2e-17
Identities = 43/92 (46%), Positives = 63/92 (67%), Gaps = 1/92 (1%)
Query: 137 HGYSLTSINPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFGNP 196
HG + + + P + + V+VDE +CIGC+ C++VA + F IE D+GR+RV Q G+P
Sbjct: 19 HGQARSGLEPELGGELRQKLVWVDEVTCIGCRYCSHVATNTFYIEPDYGRSRVVRQNGDP 78
Query: 197 -ELIQTAIESCPVDCIHWTSAAQLSLLEDEMR 227
EL+Q AI++CPVDCIHW + ++L LE E R
Sbjct: 79 EELVQEAIDTCPVDCIHWVNPSELRQLEAERR 110
>ref|ZP_00517594.1| similar to Ferredoxin [Crocosphaera watsonii WH 8501]
gi|67854002|gb|EAM49317.1| similar to Ferredoxin
[Crocosphaera watsonii WH 8501]
Length = 144
Score = 91.7 bits (226), Expect = 3e-17
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 142 TSINPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFGNPE-LIQ 200
T P + + V+VDE +CIGCKNC + A + F +EE++GRARVYNQ G+ E IQ
Sbjct: 28 TGFEPELGGQLRQKGVYVDELTCIGCKNCVHFAPNTFYVEENYGRARVYNQDGDEEDTIQ 87
Query: 201 TAIESCPVDCIHWTSAAQLSLLED 224
AI++CPVDCIHW +L LED
Sbjct: 88 EAIDTCPVDCIHWVDYTELEELED 111
>ref|NP_682930.1| hypothetical protein tlr2140 [Thermosynechococcus elongatus BP-1]
gi|22295867|dbj|BAC09692.1| tlr2140 [Thermosynechococcus
elongatus BP-1]
Length = 140
Score = 88.6 bits (218), Expect = 2e-16
Identities = 43/77 (55%), Positives = 58/77 (74%), Gaps = 3/77 (3%)
Query: 157 VFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFGNP-ELIQTAIESCPVDCIHWTS 215
V+VDE +CIGCK+CA+VA + F IE ++GR+RV Q G+P ELIQ AI++CPVDCIHW
Sbjct: 41 VYVDEITCIGCKHCAHVARNTFYIEPNYGRSRVVRQDGDPLELIQEAIDTCPVDCIHWVD 100
Query: 216 AAQLSLLEDEMRRIERV 232
+L LE E R+++V
Sbjct: 101 YTELKRLEKE--RLDQV 115
>ref|ZP_00325218.1| COG1141: Ferredoxin [Trichodesmium erythraeum IMS101]
Length = 151
Score = 87.8 bits (216), Expect = 4e-16
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 26/142 (18%)
Query: 142 TSINPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFG-NPELIQ 200
+ + P + + + V+VDE +C+GCK+CA++A + F +E D GR+RV++Q G + ELIQ
Sbjct: 33 SGLEPELGGALRQKGVYVDEITCVGCKHCAHIAHNTFYMEPDHGRSRVFDQDGDSQELIQ 92
Query: 201 TAIESCPVDCIHWTSAAQLSLLEDEMRRIERVNLYF*KHKV*MGSALGDVFRMTIITAGK 260
AI++CPVDCIHW +L LE E + +++ I G
Sbjct: 93 EAIDTCPVDCIHWVDYTKLKTLEQERK-----------------------YQVIPIAGG- 128
Query: 261 YPMGEKTVKILDYENSEEEVKE 282
P+ TV+I ++N + +K+
Sbjct: 129 -PVDHSTVRIASHKNKQNFIKK 149
>ref|ZP_00111983.1| COG1141: Ferredoxin [Nostoc punctiforme PCC 73102]
Length = 153
Score = 87.4 bits (215), Expect = 5e-16
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 142 TSINPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFGN-PELIQ 200
+ + P + ++ V+VDE +CIGCK+CA+VA + F IE D+GR+RV Q G+ E+IQ
Sbjct: 33 SGLEPELGGLLRQNGVYVDEITCIGCKHCAHVARNTFYIEPDYGRSRVVRQDGDAEEIIQ 92
Query: 201 TAIESCPVDCIHWTSAAQLSLLEDEMR 227
AI++CPVDCIHW +L LE E +
Sbjct: 93 EAIDTCPVDCIHWVDYTELKKLEQERK 119
>dbj|BAB77569.1| alr0045 [Nostoc sp. PCC 7120] gi|17227541|ref|NP_484089.1|
hypothetical protein alr0045 [Nostoc sp. PCC 7120]
gi|25387640|pir||AE1812 hypothetical protein alr0045
[imported] - Nostoc sp. (strain PCC 7120)
Length = 152
Score = 85.9 bits (211), Expect = 1e-15
Identities = 39/72 (54%), Positives = 54/72 (74%), Gaps = 1/72 (1%)
Query: 157 VFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFGN-PELIQTAIESCPVDCIHWTS 215
V+VDE +CIGCK+CA+VA + F IE D+GR+RV Q G+ E+IQ AI++CPVDCIHW
Sbjct: 47 VYVDEITCIGCKHCAHVARNTFYIEPDYGRSRVIRQDGDAEEVIQEAIDTCPVDCIHWVD 106
Query: 216 AAQLSLLEDEMR 227
+L LE++ +
Sbjct: 107 YTELKNLEEDRK 118
>ref|ZP_00162598.1| COG1141: Ferredoxin [Anabaena variabilis ATCC 29413]
Length = 152
Score = 85.9 bits (211), Expect = 1e-15
Identities = 39/72 (54%), Positives = 54/72 (74%), Gaps = 1/72 (1%)
Query: 157 VFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFGN-PELIQTAIESCPVDCIHWTS 215
V+VDE +CIGCK+CA+VA + F IE D+GR+RV Q G+ E+IQ AI++CPVDCIHW
Sbjct: 47 VYVDEITCIGCKHCAHVARNTFYIEPDYGRSRVIRQDGDAEEVIQEAIDTCPVDCIHWVD 106
Query: 216 AAQLSLLEDEMR 227
+L LE++ +
Sbjct: 107 YTELKNLEEDRK 118
>ref|NP_442688.1| ferredoxin (bacterial type ferredoxin family) [Synechocystis sp.
PCC 6803] gi|1006606|dbj|BAA10759.1| ferredoxin
(bacterial type ferredoxin family) [Synechocystis sp.
PCC 6803] gi|7451565|pir||S77067 hypothetical protein
sll0662 - Synechocystis sp. (strain PCC 6803)
Length = 133
Score = 85.5 bits (210), Expect = 2e-15
Identities = 43/98 (43%), Positives = 64/98 (64%), Gaps = 6/98 (6%)
Query: 131 RVYDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEEDFGRARVY 190
R +DD G + P + + V+VDE +CIGCKNCA+VA + F IE++ GR+R +
Sbjct: 25 RNFDDRSG-----LEPELGGELRERGVYVDEVTCIGCKNCAHVAPNTFTIEQEHGRSRAF 79
Query: 191 NQFGNPE-LIQTAIESCPVDCIHWTSAAQLSLLEDEMR 227
+Q G+ E +IQ AI++CPVDCIHW +L LE++ +
Sbjct: 80 SQNGDDEAVIQEAIDTCPVDCIHWVPYDELKHLEEKRK 117
>dbj|BAC42598.1| unknown protein [Arabidopsis thaliana]
Length = 416
Score = 85.1 bits (209), Expect = 2e-15
Identities = 64/207 (30%), Positives = 100/207 (47%), Gaps = 19/207 (9%)
Query: 121 YEVLSDPVQRRVYD-------DIHGYSLTSI-NPFMDDSSPKDHVFVDEFSCIGCKNCAN 172
+ ++SDP+ R+ YD ++ GY+ I + + + + FVDE C+GC CA
Sbjct: 48 FSLISDPISRQAYDKEQAKLEELRGYTGKPIYSVWCGPETEQRAAFVDEVKCVGCLKCAL 107
Query: 173 VACDVFGIEEDFGRARVYNQFGNPE-LIQTAIESCPVDCIHWTSAAQLSLLEDEMRRIER 231
A F IE +GRARV Q+ +PE I+ AIE+CPVDCI + L+ LE M + R
Sbjct: 108 CAEKTFAIETAYGRARVVAQWADPESKIKEAIEACPVDCISMVERSDLAPLEFLMSKQPR 167
Query: 232 VNLYF*KHKV*MGSALGDVFRMTIITAGKY-PMGEKTVKILDYENSEEEVKERAKRAAAA 290
N+ ++ +G+ +G+ + K+ K + E S+ EV+ A A +
Sbjct: 168 GNV-----RIGVGNTVGERVSNVFVDVKKFQERYAKAMSRTTKETSQREVQISAVEAIRS 222
Query: 291 ARKWREYSRKGGAVKPSTVKLPEATSS 317
W Y R KP + PE+ S
Sbjct: 223 ISNWL-YWRSSPYTKPLS---PESNMS 245
>ref|NP_893594.1| hypothetical protein PMM1477 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986] gi|33634251|emb|CAE19936.1|
conserved hypothetical [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 121
Score = 82.4 bits (202), Expect = 2e-14
Identities = 39/89 (43%), Positives = 54/89 (59%), Gaps = 1/89 (1%)
Query: 141 LTSINPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFG-NPELI 199
LT P + + V+VDE CIGC+ CA+VA + F +++D+GR+R Q G N E +
Sbjct: 18 LTGYEPVLGGELTEKAVWVDESRCIGCRYCAHVATNTFVVDDDYGRSRAIRQDGDNLETV 77
Query: 200 QTAIESCPVDCIHWTSAAQLSLLEDEMRR 228
Q AI++CPVDCIHW L LE + R
Sbjct: 78 QEAIDTCPVDCIHWVEFGNLEDLESSLDR 106
>ref|NP_925826.1| hypothetical protein gll2880 [Gloeobacter violaceus PCC 7421]
gi|35213450|dbj|BAC90821.1| gll2880 [Gloeobacter
violaceus PCC 7421]
Length = 144
Score = 81.6 bits (200), Expect = 3e-14
Identities = 38/72 (52%), Positives = 52/72 (71%), Gaps = 1/72 (1%)
Query: 157 VFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFGN-PELIQTAIESCPVDCIHWTS 215
V+VDE +CIGC +CA VA + F +E ++GR+RV +Q G+ ELIQ AI+ CPVDCIHW
Sbjct: 43 VYVDEVTCIGCGHCAYVARNTFYLEAEYGRSRVVDQNGDATELIQEAIDCCPVDCIHWVD 102
Query: 216 AAQLSLLEDEMR 227
+L LE++ R
Sbjct: 103 YTELPALEEQRR 114
>gb|AAD26588.1| unknown [Synechococcus sp. PCC 7002]
Length = 141
Score = 77.8 bits (190), Expect = 4e-13
Identities = 36/68 (52%), Positives = 48/68 (69%), Gaps = 1/68 (1%)
Query: 157 VFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFGN-PELIQTAIESCPVDCIHWTS 215
V+VDE +CIGCK+CA+ A + F IEE+ GRAR Y Q G+ E++Q AI++CPVD IHW
Sbjct: 42 VYVDETTCIGCKHCAHTAPNTFYIEEEHGRARAYRQDGDAEEIVQEAIDTCPVDSIHWLD 101
Query: 216 AAQLSLLE 223
+L E
Sbjct: 102 YTELKAKE 109
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 541,466,978
Number of Sequences: 2540612
Number of extensions: 21986708
Number of successful extensions: 57905
Number of sequences better than 10.0: 2136
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 814
Number of HSP's that attempted gapping in prelim test: 55343
Number of HSP's gapped (non-prelim): 2217
length of query: 319
length of database: 863,360,394
effective HSP length: 128
effective length of query: 191
effective length of database: 538,162,058
effective search space: 102788953078
effective search space used: 102788953078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)
Medicago: description of AC135160.2