Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135101.6 + phase: 0 /pseudo
         (1281 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAR13313.1| gag-pol polyprotein [Phaseolus vulgaris]               160  3e-37
gb|AAF20282.1| gag-pol polyprotein [Vitis vinifera]                   151  2e-34
gb|AAT38786.1| putative gag-pol polyprotein [Solanum demissum]         87  5e-15
gb|AAT38797.1| putative polyprotein [Solanum demissum]                 83  7e-14
gb|AAP51797.1| putative copia-type polyprotein [Oryza sativa (ja...    72  1e-10
gb|AAP46257.1| putative polyprotein [Oryza sativa (japonica cult...    72  1e-10
ref|XP_470746.1| putative gag-pol polyprotein [Oryza sativa] gi|...    72  1e-10
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi...    67  3e-09
ref|XP_475746.1| putative polyprotein [Oryza sativa (japonica cu...    66  7e-09
ref|NP_915040.1| P0471B04.27 [Oryza sativa (japonica cultivar-gr...    65  1e-08
gb|AAG51247.1| copia-type polyprotein, putative; 28768-32772 [Ar...    63  6e-08
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...    63  6e-08
emb|CAB75932.1| putative protein [Arabidopsis thaliana] gi|11278...    62  1e-07
gb|AAC18777.1| gag-protease polyprotein [Glycine max] gi|7488678...    61  2e-07
gb|AAT38758.1| putative gag-pol polyprotein [Solanum demissum]         60  4e-07
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                       60  5e-07
gb|AAG60117.1| copia-type polyprotein, putative [Arabidopsis tha...    59  8e-07
gb|AAG50765.1| copia-type polyprotein, putative [Arabidopsis tha...    59  8e-07
gb|AAD50001.1| Hypothetical protein [Arabidopsis thaliana] gi|25...    59  8e-07
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] gi...    59  8e-07

>gb|AAR13313.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 529

 Score =  160 bits (405), Expect = 3e-37
 Identities = 71/110 (64%), Positives = 93/110 (84%)

Query: 4   VAPPLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKA 63
           +APP+FDG++Y++WAV++E YLEALD+WEA+EEDYE+  LP NPT+AQ+K  K++K K++
Sbjct: 1   MAPPVFDGDSYQMWAVRMETYLEALDLWEAVEEDYEIQSLPENPTVAQIKSQKDKKMKRS 60

Query: 64  KAKSCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNLM 113
           KAK+CLFA V   VFTRIM+LK+ K IWDYLK EY GDERIR +Q LNL+
Sbjct: 61  KAKACLFAAVSPMVFTRIMSLKSAKEIWDYLKAEYEGDERIRGMQALNLI 110


>gb|AAF20282.1| gag-pol polyprotein [Vitis vinifera]
          Length = 581

 Score =  151 bits (381), Expect = 2e-34
 Identities = 66/110 (60%), Positives = 92/110 (83%)

Query: 4   VAPPLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKA 63
           VAP + DG+NYE WAV++  +L+ALDVWEA+EE+YEVPPL  +PT+AQ+K HKER+T+KA
Sbjct: 8   VAPSVLDGDNYETWAVRMTVHLQALDVWEAVEENYEVPPLGADPTVAQMKLHKERRTRKA 67

Query: 64  KAKSCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNLM 113
           KAK+CLFA V  ++F +IM + +   IW+YLKEEY GDERI+++Q++NL+
Sbjct: 68  KAKACLFAAVSPSIFIKIMKIDSAAEIWEYLKEEYKGDERIKNMQVMNLI 117


>gb|AAT38786.1| putative gag-pol polyprotein [Solanum demissum]
          Length = 1133

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 40/92 (43%), Positives = 61/92 (65%)

Query: 21  IEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAKSCLFAGVLETVFTR 80
           ++ YL+ L +W+ +EED    PL  NPT+ Q++ H+E   K  KA S + A V +++FTR
Sbjct: 1   MKTYLKGLGLWKYVEEDNAPEPLRANPTLQQIRSHEEEIAKGPKALSFIHAAVSDSIFTR 60

Query: 81  IMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
           IMT ++ K  WD LK+E+ G +R R +Q+LNL
Sbjct: 61  IMTCESAKESWDMLKQEFQGSDRTRQMQILNL 92


>gb|AAT38797.1| putative polyprotein [Solanum demissum]
          Length = 1758

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 40/70 (57%), Positives = 50/70 (71%)

Query: 43  LPNNPTMAQLKYHKERKTKKAKAKSCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDE 102
           LP NPT+AQ+K + E KTKK+KAKS +   V ++VF RIM  KT K  WD LKEEY G +
Sbjct: 22  LPENPTLAQIKSNNEEKTKKSKAKSLMQNAVADSVFYRIMACKTAKEAWDRLKEEYQGSD 81

Query: 103 RIRSIQMLNL 112
           R R +Q+LNL
Sbjct: 82  RTRQMQVLNL 91


>gb|AAP51797.1| putative copia-type polyprotein [Oryza sativa (japonica
           cultivar-group)] gi|37530416|ref|NP_919510.1| putative
           copia-type polyprotein [Oryza sativa (japonica
           cultivar-group)] gi|18542917|gb|AAL75752.1| Putative
           copia-type polyprotein [Oryza sativa]
          Length = 1350

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 34/106 (32%), Positives = 58/106 (54%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+F G NY++W++K+   L +  +W+ +E  Y+        T  Q K   E +   AKA 
Sbjct: 7   PVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKAL 66

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             +  GV E++F RI+  K  K  WD LKEE+ G +++ ++++  L
Sbjct: 67  FLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTL 112


>gb|AAP46257.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
           gi|50919599|ref|XP_470160.1| putative polyprotein [Oryza
           sativa (japonica cultivar-group)]
          Length = 1335

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 34/106 (32%), Positives = 58/106 (54%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+F G NY++W++K+   L +  +W+ +E  Y+        T  Q K   E +   AKA 
Sbjct: 7   PVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKAL 66

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             +  GV E++F RI+  K  K  WD LKEE+ G +++ ++++  L
Sbjct: 67  FLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTL 112


>ref|XP_470746.1| putative gag-pol polyprotein [Oryza sativa]
           gi|18071369|gb|AAL58228.1| putative gag-pol polyprotein
           [Oryza sativa]
          Length = 1167

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 34/106 (32%), Positives = 58/106 (54%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+F G NY++W++K+   L +  +W+ +E  Y+        T  Q K   E +   AKA 
Sbjct: 7   PVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKAL 66

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             +  GV E++F RI+  K  K  WD LKEE+ G +++ ++++  L
Sbjct: 67  FLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTL 112


>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
           gi|25301699|pir||F84531 probable retroelement pol
           polyprotein [imported] - Arabidopsis thaliana
          Length = 1347

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLP--NNPTMAQLK-YHKERKTKKA 63
           P+FDG  Y+ W++K+        +W  +EE   V P+     P  A+ K   +E  T   
Sbjct: 10  PIFDGEKYDFWSIKMATIFRTRKLWSVVEEGVPVEPVQAEETPETARAKTLREEAVTNDT 69

Query: 64  KAKSCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
            A   L   V + +F+RI    + K  WD LK+EY G  ++R +++ +L
Sbjct: 70  MALQILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSL 118


>ref|XP_475746.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
           gi|48843818|gb|AAT47077.1| putative polyprotein [Oryza
           sativa (japonica cultivar-group)]
          Length = 1136

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 32/106 (30%), Positives = 56/106 (52%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+F   NY++W++K+   L +  +W+ +E  Y+        T  Q K   E +   AKA 
Sbjct: 7   PVFARENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLVEDRMSDAKAL 66

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             +  GV E++F RI+  K  K  WD LKEE+   +++ ++++  L
Sbjct: 67  FLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQASQKVLAVKLQTL 112


>ref|NP_915040.1| P0471B04.27 [Oryza sativa (japonica cultivar-group)]
          Length = 278

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 36/108 (33%), Positives = 54/108 (49%), Gaps = 15/108 (13%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+    NY  WA+K+EA +EA  +W+AIE        P       +K  K+       A+
Sbjct: 31  PVLTSTNYSTWAIKMEANMEAQGIWDAIE--------PAADEAVDIKKDKQ-------AR 75

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNLMS 114
           +CLF  V E V  +I   KT K +W+ LK  + G ER++  ++  L S
Sbjct: 76  ACLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKS 123


>gb|AAG51247.1| copia-type polyprotein, putative; 28768-32772 [Arabidopsis
           thaliana] gi|25301683|pir||E86451 probable copia-type
           polyprotein, 28768-32772 [imported] - Arabidopsis
           thaliana
          Length = 1334

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P FDG+ YE WA+ +E  + + + W+ IE     P      T AQ     E+  K  K K
Sbjct: 10  PKFDGD-YEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEKTVKDHKVK 68

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
           + LFA + +T+   I+  +T K +W+ +K +Y G++R++S Q+  L
Sbjct: 69  NYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRL 114


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1334

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P FDG+ YE WA+ +E  + + + W+ IE     P      T AQ     E+  K  K K
Sbjct: 10  PKFDGD-YEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEKTVKDHKVK 68

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
           + LFA + +T+   I+  +T K +W+ +K +Y G++R++S Q+  L
Sbjct: 69  NYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRL 114


>emb|CAB75932.1| putative protein [Arabidopsis thaliana] gi|11278365|pir||T47841
           hypothetical protein T2O9.150 - Arabidopsis thaliana
          Length = 1339

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)

Query: 1   FSKVAPPLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTM-AQLKYHKERK 59
           F + A P FDG  Y+ W++ +E +L + ++W  +EE      +   P   AQ    +E K
Sbjct: 7   FVQPAIPRFDGY-YDFWSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSAVEEAK 65

Query: 60  TKKAKAKSCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQM 109
            K  K K+ LF  +   +   I+   T KAIW+ +K++Y G  +++  Q+
Sbjct: 66  LKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQL 115


>gb|AAC18777.1| gag-protease polyprotein [Glycine max] gi|7488678|pir||T06419
           gag-proteinase polyprotein - soybean retrovirus-like
           element
          Length = 640

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 34/111 (30%), Positives = 55/111 (48%), Gaps = 11/111 (9%)

Query: 6   PPLFDGNNYELWAVKIEAYLEALD--VWEAIEEDYEVPPLPN---------NPTMAQLKY 54
           PP+ DG NYE W  ++ A+L++LD   W+A+ +D+E P + +          P     K 
Sbjct: 13  PPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKDWEHPKMLDTEGKPTDGLKPEEDWTKE 72

Query: 55  HKERKTKKAKAKSCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIR 105
             E     +KA + LF GV + +F  I T    K  W+ LK  + G  +++
Sbjct: 73  EDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVK 123


>gb|AAT38758.1| putative gag-pol polyprotein [Solanum demissum]
          Length = 1333

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 29/106 (27%), Positives = 62/106 (58%), Gaps = 9/106 (8%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+F G NY+ W++K++   ++ ++W+ +E    +P    N    Q++ H++R +K   A 
Sbjct: 15  PIFRGENYQFWSLKMKTLFKSQELWDIVETG--IPEGNAN----QMREHRKRDSK---AL 65

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             +   + + +F RI  ++T K  W+ LK+EY GD+++ ++++  L
Sbjct: 66  FTIQQALDDEIFPRISAVETSKQAWEILKQEYFGDDKVITVKLQTL 111


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 11/111 (9%)

Query: 6   PPLFDGNNYELWAVKIEAYLEALD--VWEAIEEDYEVPPL------PNN---PTMAQLKY 54
           PP+ DG NYE W  ++ A+L++LD   W+A+ + +E P +      P N   P     K 
Sbjct: 13  PPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKE 72

Query: 55  HKERKTKKAKAKSCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIR 105
             E     +KA + LF GV + +F  I T    K  W+ LK  + G  +++
Sbjct: 73  EDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVK 123


>gb|AAG60117.1| copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 25/106 (23%), Positives = 58/106 (54%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+   +NY+ W+++++A L A DVWE +E+ +  P    + +  Q    ++ + +  KA 
Sbjct: 11  PVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKAL 70

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             ++ G+ E  F +++   + K  W+ L+  Y G ++++ +++  L
Sbjct: 71  CLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTL 116


>gb|AAG50765.1| copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321254|gb|AAG50698.1| copia-type polyprotein,
           putative [Arabidopsis thaliana] gi|25301687|pir||F96614
           probable copia-type polyprotein T18I24.5 [imported] -
           Arabidopsis thaliana
          Length = 1320

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 25/106 (23%), Positives = 58/106 (54%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+   +NY+ W+++++A L A DVWE +E+ +  P    + +  Q    ++ + +  KA 
Sbjct: 11  PVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKAL 70

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             ++ G+ E  F +++   + K  W+ L+  Y G ++++ +++  L
Sbjct: 71  CLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTL 116


>gb|AAD50001.1| Hypothetical protein [Arabidopsis thaliana] gi|25301681|pir||F86246
           hypothetical protein [imported] - Arabidopsis thaliana
          Length = 1352

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 25/106 (23%), Positives = 58/106 (54%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+   +NY+ W+++++A L A DVWE +E+ +  P    + +  Q    ++ + +  KA 
Sbjct: 11  PVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKAL 70

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             ++ G+ E  F +++   + K  W+ L+  Y G ++++ +++  L
Sbjct: 71  CLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTL 116


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|11278364|pir||T47925 copia-type polyprotein -
           Arabidopsis thaliana
          Length = 1352

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 25/106 (23%), Positives = 58/106 (54%)

Query: 7   PLFDGNNYELWAVKIEAYLEALDVWEAIEEDYEVPPLPNNPTMAQLKYHKERKTKKAKAK 66
           P+   +NY+ W+++++A L A DVWE +E+ +  P    + +  Q    ++ + +  KA 
Sbjct: 11  PVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKAL 70

Query: 67  SCLFAGVLETVFTRIMTLKTPKAIWDYLKEEYAGDERIRSIQMLNL 112
             ++ G+ E  F +++   + K  W+ L+  Y G ++++ +++  L
Sbjct: 71  CLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTL 116


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.361    0.159    0.550 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,635,663,986
Number of Sequences: 2540612
Number of extensions: 53693148
Number of successful extensions: 212906
Number of sequences better than 10.0: 190
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 212649
Number of HSP's gapped (non-prelim): 321
length of query: 1281
length of database: 863,360,394
effective HSP length: 140
effective length of query: 1141
effective length of database: 507,674,714
effective search space: 579256848674
effective search space used: 579256848674
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.9 bits)
S2: 81 (35.8 bits)


Medicago: description of AC135101.6